Rmu_sc0001821.1_g000008

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001821.1
OG0006149
Physical Location & Seq
Reverse (-)
77975 .. 82158
4184 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2130 bp
atggtcaaccatggattgattgattcagctttttttctctcttggggtggcagtccttcaatcgaaatgtataatgttcctgaacatgcaaataatgacgtttatatgatccaaggcatggaaccaaatatgcattttacgactccctttgaacaagttgatgccatgtacaacgaaggagcccccgagtatgtagttgatcagggcatgtattatcctactgccaccaactatgggtactactgtacaggatttgaatcacccggtgaatgggaggaccaacgtaggacttttggtgtagatggtccagatgtccagtacacgggtgtgcaaaatgaaagtttgccttatgtatattatacacctggctatgggtatgcacagacatcatacaacccatacaacccttacatacctggtgctatgataggtgttgatggccaacagtattataccgtccccccttatcagaattctgtctcttcacctgcttatgtcccttttgttgctcagccggatgtcattcccaacagttcacctgactctttgtacgatactggaacatctattaatagacctggtggaagaggccttaaatataatttgaattcagcttctggagccttccctaacactcctaagccatcctcgaatcagatgagccccttgactaggttattagaaaggccaagaggcaatgttggaccaagcaagccagctgtaactcatggcagtgtttcttctggtcgttttccaaaccctgctcaccagagtagaagtgcatctggctcagttccagccgtggataacctttcaaatgggaaagttttgcctcatcataatcaattgaaggtagcaatccccgtaggtaatggcttgtctgattttggatcgggtgtacaaggacgagatgctgtggctaagcttcggccaaagttccatgttagcagggccttgaatgatatacatggtaatatagagccgttgagtgagcagaattgtggtcctagagtcaatagattaaaaaatcaattagctgttaaagcctacacgaccaaggcaggagatagtaatgcgcaaggaaatatcattattcgcactgatcagtataacaaggacaatctcccagttgattatgtgcatgcaaaattttttgtaataaaatcatacagcgaggatgatgtgcataagagtgttaaatacaatgtctggtcatccacaccgcatggaaacaaaaaactaagcagtgcttatgaagatgcccaacgaatagctgcagggaaccctggaggctgtcctattttcctcttcttttcggtaaatgcaagtggtcaattctgtggcgtcgcggagatggttggcccggttgacttcaacaaggatatggacttttggcagcaagataaatggagtgggagcttccctgttatttggcacattgtcaaagatgtgccgaacaccagtgttaggcacatcgtattggagaataatgagaacaagccggtgactaatagcagggatacacaagagatcatgtataagaaaggcttggagatgttgaaaatattcaagaatcacatgatgaagacctcattgcttgatgacttcatgtactatgaagaccgtcagaaaatcatgcaggatgagagaggcaggtttattgttagaaattttgagactccattcttagtaacagcattgggacccccacgcaagctgaaccctgttcgtgagctgcctcacagcaaagaggaaaaaaacaccaaacccaatgatgcaaacaactcagaaaagtctctggtttctgcatctgagcagatttcctcaaacttagatgttaaagatgcaagtattagtagtgaaaattcagagaaaaaggcacttgaagcagaagatgatgctgtatctaccttaaaaattagttcgcttactattgatccgaagcaggtggagcttgattcttcagctggtgctgctactgctacttcaaaaaatgttgatgttgtcactgtaggctcaattcctgttagagttaatggatttgctgaatccttgggtactttaacagttggaacgatccctctggatcctagagcactaaaactcgagaagggcagttctcttaactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

709

Amino Acids

77.98

Weight (kDa)

5.93

Isoelectric Point (pI)

35.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 382 - 524 1.8e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 496, 1936
Acc16I TGCGCA 1 cut(s) 1077
Acc36I ACCTGC 3 cut(s) 496, 1644, 1936
AccB7I CCANNNNNTGG 1 cut(s) 118
AccII CGCG 1 cut(s) 1349
AciI CCGC 2 cut(s) 1223, 1349
AclWI GGATC 6 cut(s) 103, 898, 1931, 2071, 2081, 2094
AcoI YGGCCR 2 cut(s) 439, 929
AcsI RAATTY 5 cut(s) 472, 607, 1148, 1669, 1864
AcuI CTGAAG 1 cut(s) 1947
AcyI GRCGYC 1 cut(s) 1344
AdeI CACNNNGTG 1 cut(s) 266
AfaI GTAC 8 cut(s) 170, 239, 247, 320, 551, 900, 1613, 2059
AfiI CCNNNNNNNGG 7 cut(s) 118, 234, 270, 322, 371, 672, 1467
AjnI CCWGG 4 cut(s) 364, 415, 577, 1285
AleI CACNNNNGTG 1 cut(s) 326
Alw21I GWGCWC 1 cut(s) 2098
Alw26I GTCTC 3 cut(s) 484, 1670, 1800
AlwI GGATC 6 cut(s) 103, 898, 1931, 2071, 2081, 2094
AlwNI CAGNNNCTG 1 cut(s) 617
Ama87I CYCGRG 2 cut(s) 185, 2105
AoxI GGCC 6 cut(s) 439, 589, 686, 929, 951, 1360
ApeKI GCWGC 4 cut(s) 1274, 1396, 1735, 1973
ApoI RAATTY 5 cut(s) 472, 607, 1148, 1669, 1864
AseI ATTAAT 1 cut(s) 570
Asp700I GAANNNNTTC 1 cut(s) 1565
AspLEI GCGC 1 cut(s) 1078
AspS9I GGNCC 7 cut(s) 277, 305, 704, 951, 1004, 1361, 1703
AsuC2I CCSGG 2 cut(s) 264, 1364
AsuHPI GGTGA 6 cut(s) 252, 278, 477, 528, 758, 1516
AvaI CYCGRG 2 cut(s) 185, 2105
AvaII GGWCC 5 cut(s) 277, 305, 704, 1004, 1703
BaeI ACNNNNGTAYC 2 cut(s) 229, 262
BalI TGGCCA 1 cut(s) 441
BamHI GGATCC 1 cut(s) 2086
BanII GRGCYC 2 cut(s) 184, 665
BbsI GAAGAC 2 cut(s) 1592, 1626
Bbv12I GWGCWC 1 cut(s) 2098
BbvI GCAGC 4 cut(s) 1261, 1408, 1722, 1960
BccI CCATC 4 cut(s) 296, 431, 652, 1348
BceAI ACGGC 2 cut(s) 785, 967
BciT130I CCWGG 4 cut(s) 366, 417, 579, 1287
BciVI GTATCC 1 cut(s) 1513
BclI TGATCA 2 cut(s) 199, 1102
BcnI CCSGG 2 cut(s) 264, 1364
BcoDI GTCTC 3 cut(s) 484, 1670, 1800
BfaI CTAG 3 cut(s) 672, 1008, 2091
BfmI CTRYAG 2 cut(s) 1275, 2010
BfuAI ACCTGC 3 cut(s) 496, 1644, 1936
BfuI GTATCC 1 cut(s) 1513
BisI GCNGC 4 cut(s) 1275, 1397, 1736, 1974
BlpI GCTNAGC 2 cut(s) 510, 921
BlsI GCNGC 4 cut(s) 1276, 1398, 1737, 1975
Bme1390I CCNGG 6 cut(s) 264, 366, 417, 579, 1287, 1364
Bme18I GGWCC 5 cut(s) 277, 305, 704, 1004, 1703
BmeT110I CYCGRG 2 cut(s) 185, 2105
BmgT120I GGNCC 7 cut(s) 277, 305, 704, 951, 1004, 1361, 1703
BmiI GGNNCC 7 cut(s) 123, 181, 622, 1283, 1704, 1705, 2088
BmrFI CCNGG 6 cut(s) 264, 366, 417, 579, 1287, 1364
BmrI ACTGGG 1 cut(s) 1121
BmsI GCATC 8 cut(s) 151, 791, 901, 1249, 1765, 1817, 1834, 1888
BmuI ACTGGG 1 cut(s) 1121
BpiI GAAGAC 2 cut(s) 1592, 1626
BpmI CTGGAG 2 cut(s) 639, 1308
Bpu10I CCTNAGC 1 cut(s) 639
Bpu1102I GCTNAGC 2 cut(s) 510, 921
BpuMI CCSGG 2 cut(s) 264, 1364
BsaBI GATNNNNATC 1 cut(s) 256
BsaHI GRCGYC 1 cut(s) 1344
BsaJI CCNNGG 6 cut(s) 10, 112, 801, 1056, 1285, 2052
Bsc4I CCNNNNNNNGG 7 cut(s) 118, 234, 270, 322, 371, 672, 1467
Bse118I RCCGGY 1 cut(s) 1501
Bse1I ACTGG 4 cut(s) 316, 562, 1127, 1461
Bse3DI GCAATG 2 cut(s) 703, 1592
Bse8I GATNNNNATC 1 cut(s) 256
BseBI CCWGG 4 cut(s) 366, 417, 579, 1287
BseDI CCNNGG 6 cut(s) 10, 112, 801, 1056, 1285, 2052
BseGI GGATG 5 cut(s) 523, 644, 1183, 1214, 1648
BseJI GATNNNNATC 1 cut(s) 256
BseLI CCNNNNNNNGG 7 cut(s) 118, 234, 270, 322, 371, 672, 1467
BseMI GCAATG 2 cut(s) 703, 1592
BseMII CTCAG 4 cut(s) 524, 804, 1800, 1803
BseNI ACTGG 4 cut(s) 316, 562, 1127, 1461
BseXI GCAGC 4 cut(s) 1261, 1408, 1722, 1960
Bsh1236I CGCG 1 cut(s) 1349
BshFI GGCC 6 cut(s) 441, 591, 688, 931, 953, 1362
BsiHKAI GWGCWC 1 cut(s) 2098
BsiHKCI CYCGRG 2 cut(s) 185, 2105
BsiSI CCGG 4 cut(s) 264, 515, 1364, 1502
BslFI GGGAC 3 cut(s) 443, 482, 1716
BslI CCNNNNNNNGG 7 cut(s) 118, 234, 270, 322, 371, 672, 1467
BsmAI GTCTC 3 cut(s) 484, 1670, 1800
BsmFI GGGAC 3 cut(s) 443, 482, 1716
BsnI GGCC 6 cut(s) 441, 591, 688, 931, 953, 1362
BsoBI CYCGRG 2 cut(s) 185, 2105
Bsp1286I GDGCHC 3 cut(s) 184, 665, 2098
Bsp1407I TGTACA 3 cut(s) 168, 245, 898
Bsp143I GATC 8 cut(s) 108, 199, 890, 1102, 1530, 1936, 2076, 2086
Bsp1720I GCTNAGC 2 cut(s) 510, 921
Bsp19I CCATGG 1 cut(s) 10
BspACI CCGC 2 cut(s) 1223, 1349
BspANI GGCC 6 cut(s) 441, 591, 688, 931, 953, 1362
BspCNI CTCAG 4 cut(s) 523, 803, 1799, 1804
BspFNI CGCG 1 cut(s) 1349
BspLI GGNNCC 7 cut(s) 123, 181, 622, 1283, 1704, 1705, 2088
BspMAI CTGCAG 1 cut(s) 1279
BspMI ACCTGC 3 cut(s) 496, 1644, 1936
BspPI GGATC 6 cut(s) 103, 898, 1931, 2071, 2081, 2094
BsrDI GCAATG 2 cut(s) 703, 1592
BsrFI RCCGGY 1 cut(s) 1501
BsrGI TGTACA 3 cut(s) 168, 245, 898
BsrI ACTGG 4 cut(s) 316, 562, 1127, 1461
BssAI RCCGGY 1 cut(s) 1501
BssECI CCNNGG 6 cut(s) 10, 112, 801, 1056, 1285, 2052
BssMI GATC 8 cut(s) 108, 199, 890, 1102, 1530, 1936, 2076, 2086
BssNI GRCGYC 1 cut(s) 1344
BssT1I CCWWGG 4 cut(s) 10, 112, 1056, 2052
Bst2UI CCWGG 4 cut(s) 366, 417, 579, 1287
Bst4CI ACNGT 7 cut(s) 245, 447, 457, 533, 1625, 2011, 2068
Bst6I CTCTTC 3 cut(s) 487, 580, 1313
BstACI GRCGYC 1 cut(s) 1344
BstAUI TGTACA 3 cut(s) 168, 245, 898
BstC8I GCNNGC 4 cut(s) 713, 717, 1143, 1715
BstDEI CTNAG 9 cut(s) 510, 639, 790, 921, 1241, 1687, 1786, 1812, 1831
BstDSI CCRYGG 2 cut(s) 10, 801
BstENI CCTNNNNNAGG 1 cut(s) 670
BstF5I GGATG 5 cut(s) 523, 644, 1183, 1214, 1648
BstFNI CGCG 1 cut(s) 1349
BstHHI GCGC 1 cut(s) 1078
BstKTI GATC 8 cut(s) 111, 202, 893, 1105, 1533, 1939, 2079, 2089
BstMAI GTCTC 3 cut(s) 484, 1670, 1800
BstMBI GATC 8 cut(s) 108, 199, 890, 1102, 1530, 1936, 2076, 2086
BstMWI GCNNNNNNNGC 6 cut(s) 620, 1043, 1886, 1951, 1973, 1979
BstNI CCWGG 4 cut(s) 366, 417, 579, 1287
BstNSI RCATGY 3 cut(s) 89, 211, 1145
BstSCI CCNGG 6 cut(s) 262, 364, 415, 577, 1285, 1362
BstSFI CTRYAG 2 cut(s) 1275, 2010
BstUI CGCG 1 cut(s) 1349
BstV1I GCAGC 4 cut(s) 1261, 1408, 1722, 1960
BstV2I GAAGAC 2 cut(s) 1592, 1626
BstX2I RGATCY 1 cut(s) 2086
BstYI RGATCY 1 cut(s) 2086
BsuI GTATCC 1 cut(s) 1513
BsuRI GGCC 6 cut(s) 441, 591, 688, 931, 953, 1362
BtgI CCRYGG 2 cut(s) 10, 801
BtsCI GGATG 5 cut(s) 523, 644, 1183, 1214, 1648
BtsI GCAGTG 2 cut(s) 739, 1252
BtsIMutI CAGTG 5 cut(s) 739, 1098, 1252, 1468, 2007
BveI ACCTGC 3 cut(s) 496, 1644, 1936
Cac8I GCNNGC 4 cut(s) 713, 717, 1143, 1715
CaiI CAGNNNCTG 1 cut(s) 617
CfoI GCGC 1 cut(s) 1078
Cfr10I RCCGGY 1 cut(s) 1501
Cfr13I GGNCC 7 cut(s) 277, 305, 704, 951, 1004, 1361, 1703
CseI GACGC 1 cut(s) 1333
CsiI ACCWGGT 2 cut(s) 415, 577
Csp6I GTAC 8 cut(s) 169, 238, 246, 319, 550, 899, 1612, 2058
CviQI GTAC 8 cut(s) 169, 238, 246, 319, 550, 899, 1612, 2058
DdeI CTNAG 9 cut(s) 510, 639, 790, 921, 1241, 1687, 1786, 1812, 1831
DpnI GATC 8 cut(s) 110, 201, 892, 1104, 1532, 1938, 2078, 2088
DpnII GATC 8 cut(s) 108, 199, 890, 1102, 1530, 1936, 2076, 2086
DraIII CACNNNGTG 1 cut(s) 266
EaeI YGGCCR 2 cut(s) 439, 929
Eam1104I CTCTTC 3 cut(s) 487, 580, 1313
EarI CTCTTC 3 cut(s) 487, 580, 1313
Eco130I CCWWGG 4 cut(s) 10, 112, 1056, 2052
Eco147I AGGCCT 1 cut(s) 591
Eco24I GRGCYC 2 cut(s) 184, 665
Eco47I GGWCC 5 cut(s) 277, 305, 704, 1004, 1703
Eco57I CTGAAG 1 cut(s) 1947
Eco88I CYCGRG 2 cut(s) 185, 2105
EcoNI CCTNNNNNAGG 1 cut(s) 670
EcoO109I RGGNCCY 2 cut(s) 951, 1703
EcoRI GAATTC 2 cut(s) 472, 607
EcoRII CCWGG 4 cut(s) 364, 415, 577, 1285
EcoT14I CCWWGG 4 cut(s) 10, 112, 1056, 2052
EcoT22I ATGCAT 1 cut(s) 135
EcoT38I GRGCYC 2 cut(s) 184, 665
ErhI CCWWGG 4 cut(s) 10, 112, 1056, 2052
FalI AAGNNNNNCTT 6 cut(s) 331, 363, 1234, 1266, 1532, 1564
FaqI GGGAC 3 cut(s) 443, 482, 1716
FbaI TGATCA 2 cut(s) 199, 1102
Fnu4HI GCNGC 4 cut(s) 1275, 1397, 1736, 1974
FokI GGATG 5 cut(s) 530, 631, 1190, 1201, 1655
FriOI GRGCYC 2 cut(s) 184, 665
Fsp4HI GCNGC 4 cut(s) 1275, 1397, 1736, 1974
FspBI CTAG 3 cut(s) 672, 1008, 2091
FspI TGCGCA 1 cut(s) 1077
GlaI GCGC 1 cut(s) 1077
GluI GCNGC 4 cut(s) 1275, 1397, 1736, 1974
GsuI CTGGAG 2 cut(s) 639, 1308
HaeIII GGCC 6 cut(s) 441, 591, 688, 931, 953, 1362
HapII CCGG 4 cut(s) 264, 515, 1364, 1502
HgaI GACGC 1 cut(s) 1333
HhaI GCGC 1 cut(s) 1078
Hin1I GRCGYC 1 cut(s) 1344
Hin6I GCGC 1 cut(s) 1076
HinP1I GCGC 1 cut(s) 1076
HincII GTYRAC 2 cut(s) 7, 1369
HindII GTYRAC 2 cut(s) 7, 1369
HindIII AAGCTT 1 cut(s) 923
HpaII CCGG 4 cut(s) 264, 515, 1364, 1502
HphI GGTGA 6 cut(s) 252, 278, 477, 528, 758, 1516
Hpy166II GTNNAC 5 cut(s) 7, 321, 536, 899, 1369
Hpy188I TCNGA 8 cut(s) 471, 657, 883, 1629, 1789, 1813, 1870, 1941
Hpy188III TCNNGA 7 cut(s) 80, 308, 618, 1570, 1730, 2084, 2107
Hpy8I GTNNAC 5 cut(s) 7, 321, 536, 899, 1369
Hpy99I CGWCG 1 cut(s) 1349
HpyAV CCTTC 5 cut(s) 66, 170, 634, 844, 2104
HpyCH4III ACNGT 7 cut(s) 245, 447, 457, 533, 1625, 2011, 2068
HpyCH4IV ACGT 2 cut(s) 99, 283
HpyF10VI GCNNNNNNNGC 6 cut(s) 620, 1043, 1886, 1951, 1973, 1979
HpyF3I CTNAG 9 cut(s) 510, 639, 790, 921, 1241, 1687, 1786, 1812, 1831
HpySE526I ACGT 2 cut(s) 99, 283
Hsp92I GRCGYC 1 cut(s) 1344
HspAI GCGC 1 cut(s) 1076
KflI GGGWCCC 1 cut(s) 1703
Ksp22I TGATCA 2 cut(s) 199, 1102
Kzo9I GATC 8 cut(s) 108, 199, 890, 1102, 1530, 1936, 2076, 2086
LmnI GCTCC 4 cut(s) 179, 620, 1416, 1951
Lsp1109I GCAGC 4 cut(s) 1261, 1408, 1722, 1960
LweI GCATC 8 cut(s) 151, 791, 901, 1249, 1765, 1817, 1834, 1888
MabI ACCWGGT 2 cut(s) 415, 577
MaeI CTAG 3 cut(s) 672, 1008, 2091
MaeII ACGT 2 cut(s) 99, 283
MaeIII GTNAC 4 cut(s) 721, 1504, 1690, 2005
MalI GATC 8 cut(s) 110, 201, 892, 1104, 1532, 1938, 2078, 2088
MboI GATC 8 cut(s) 108, 199, 890, 1102, 1530, 1936, 2076, 2086
MboII GAAGA 9 cut(s) 474, 597, 732, 1268, 1300, 1597, 1631, 1904, 1953
MfeI CAATTG 1 cut(s) 845
MflI RGATCY 1 cut(s) 2086
MhlI GDGCHC 3 cut(s) 184, 665, 2098
MlsI TGGCCA 1 cut(s) 441
MluNI TGGCCA 1 cut(s) 441
MlyI GAGTC 4 cut(s) 136, 536, 1020, 1672
MmeI TCCRAC 2 cut(s) 682, 2050
Mox20I TGGCCA 1 cut(s) 441
Mph1103I ATGCAT 1 cut(s) 135
MroXI GAANNNNTTC 1 cut(s) 1565
MscI TGGCCA 1 cut(s) 441
MslI CAYNNNNRTG 3 cut(s) 326, 732, 1191
Msp20I TGGCCA 1 cut(s) 441
MspA1I CMGCKG 2 cut(s) 719, 1967
MspI CCGG 4 cut(s) 264, 515, 1364, 1502
MspR9I CCNGG 6 cut(s) 264, 366, 417, 579, 1287, 1364
MunI CAATTG 1 cut(s) 845
MvaI CCWGG 4 cut(s) 366, 417, 579, 1287
MvnI CGCG 1 cut(s) 1349
MwoI GCNNNNNNNGC 6 cut(s) 620, 1043, 1886, 1951, 1973, 1979
NciI CCSGG 2 cut(s) 264, 1364
NcoI CCATGG 1 cut(s) 10
NdeII GATC 8 cut(s) 108, 199, 890, 1102, 1530, 1936, 2076, 2086
NlaIV GGNNCC 7 cut(s) 123, 181, 622, 1283, 1704, 1705, 2088
NmuCI GTSAC 2 cut(s) 1504, 2005
NsbI TGCGCA 1 cut(s) 1077
NsiI ATGCAT 1 cut(s) 135
NspI RCATGY 3 cut(s) 89, 211, 1145
OliI CACNNNNGTG 1 cut(s) 326
PaeI GCATGC 1 cut(s) 1145
PaeR7I CTCGAG 1 cut(s) 2105
PaqCI CACCTGC 2 cut(s) 496, 1936
PceI AGGCCT 1 cut(s) 591
PdmI GAANNNNTTC 1 cut(s) 1565
PfeI GAWTC 6 cut(s) 23, 257, 652, 1573, 1958, 2048
PflMI CCANNNNNTGG 1 cut(s) 118
PkrI GCNGC 4 cut(s) 1276, 1398, 1737, 1975
PleI GAGTC 4 cut(s) 136, 536, 1019, 1672
PpsI GAGTC 4 cut(s) 136, 536, 1019, 1672
PpuMI RGGWCCY 1 cut(s) 1703
PshBI ATTAAT 1 cut(s) 570
Psp5II RGGWCCY 1 cut(s) 1703
Psp6I CCWGG 4 cut(s) 364, 415, 577, 1285
PspGI CCWGG 4 cut(s) 364, 415, 577, 1285
PspN4I GGNNCC 7 cut(s) 123, 181, 622, 1283, 1704, 1705, 2088
PspPI GGNCC 7 cut(s) 277, 305, 704, 951, 1004, 1361, 1703
PspPPI RGGWCCY 1 cut(s) 1703
PstI CTGCAG 1 cut(s) 1279
PstNI CAGNNNCTG 1 cut(s) 617
PsuI RGATCY 1 cut(s) 2086
PvuII CAGCTG 2 cut(s) 719, 1967
RsaI GTAC 8 cut(s) 170, 239, 247, 320, 551, 900, 1613, 2059
RsaNI GTAC 8 cut(s) 169, 238, 246, 319, 550, 899, 1612, 2058
RseI CAYNNNNRTG 3 cut(s) 326, 732, 1191
SatI GCNGC 4 cut(s) 1275, 1397, 1736, 1974
Sau3AI GATC 8 cut(s) 108, 199, 890, 1102, 1530, 1936, 2076, 2086
Sau96I GGNCC 7 cut(s) 277, 305, 704, 951, 1004, 1361, 1703
SchI GAGTC 4 cut(s) 136, 536, 1020, 1672
ScrFI CCNGG 6 cut(s) 264, 366, 417, 579, 1287, 1364
SduI GDGCHC 3 cut(s) 184, 665, 2098
SexAI ACCWGGT 2 cut(s) 415, 577
SfaNI GCATC 8 cut(s) 151, 791, 901, 1249, 1765, 1817, 1834, 1888
SfcI CTRYAG 2 cut(s) 1275, 2010
Sfr274I CTCGAG 1 cut(s) 2105
SinI GGWCC 5 cut(s) 277, 305, 704, 1004, 1703
SlaI CTCGAG 1 cut(s) 2105
SmiMI CAYNNNNRTG 3 cut(s) 326, 732, 1191
SmlI CTYRAG 1 cut(s) 2105
SmoI CTYRAG 1 cut(s) 2105
SphI GCATGC 1 cut(s) 1145
SseBI AGGCCT 1 cut(s) 591
SsiI CCGC 2 cut(s) 1223, 1349
SspI AATATT 1 cut(s) 1566
SspMI CTAG 3 cut(s) 672, 1008, 2091
StuI AGGCCT 1 cut(s) 591
StyD4I CCNGG 6 cut(s) 262, 364, 415, 577, 1285, 1362
StyI CCWWGG 4 cut(s) 10, 112, 1056, 2052
TaaI ACNGT 7 cut(s) 245, 447, 457, 533, 1625, 2011, 2068
TaiI ACGT 2 cut(s) 102, 286
TaqI TCGA 3 cut(s) 63, 650, 2106
TatI WGTACW 5 cut(s) 168, 245, 318, 898, 1611
TfiI GAWTC 6 cut(s) 23, 257, 652, 1573, 1958, 2048
TscAI CASTG 5 cut(s) 739, 1105, 1252, 1468, 2014
TseFI GTSAC 2 cut(s) 1504, 2005
TseI GCWGC 4 cut(s) 1274, 1396, 1735, 1973
Tsp45I GTSAC 2 cut(s) 1504, 2005
TspDTI ATGAA 5 cut(s) 351, 1269, 1597, 1598, 1632
TspRI CASTG 5 cut(s) 739, 1105, 1252, 1468, 2014
Van91I CCANNNNNTGG 1 cut(s) 118
VpaK11BI GGWCC 5 cut(s) 277, 305, 704, 1004, 1703
VspI ATTAAT 1 cut(s) 570
XagI CCTNNNNNAGG 1 cut(s) 670
XapI RAATTY 5 cut(s) 472, 607, 1148, 1669, 1864
XceI RCATGY 3 cut(s) 89, 211, 1145
XhoI CTCGAG 1 cut(s) 2105
XmnI GAANNNNTTC 1 cut(s) 1565
XspI CTAG 3 cut(s) 672, 1008, 2091
Zsp2I ATGCAT 1 cut(s) 135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.