Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003133.1

Orthogroup ID

OG0002661

Physical Location & Seq

Genomic Coordinates Forward (+)

30470 .. 38760

Gene Structure 8291 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

atgatcaatggtgatggcgaggtttggcgacagatcggttggccatctcttatcggtgactgcgttgtgccctggcaggttctgaccttgatgtttaccatggtcggggctgcagcagacgtcggtgatggtagcggccaagtgctgaggccaaatctaagcccaattgatgggcttgaagtggtgcaatcccgagacctatggaagagctgggtttgggacccaggtattagtgatttgcatctttgctatgccggattttggtggtgtctccatcaccgggagagtagtctccgaccatattccaggacaaggaggagaagttggggcttaggtcgttgggccttagttcaaatgtggtgggctattcaattgcaggttcaagacagtggactggtggcttgggattgtttttggccaactacatttcgtgatcctttggatcttacattcgtgggaggctctctgcaacttactactatgctcattcgcctaccattcttttccggtcccagaactgctagagaaatgaggaatatcatgacagatgttattcaatcaagtagcacaaattggcgattaccaagcagtcaaagaagagtcatttcttttcgtagctcagtgaagtctgtccaaacctcaacccaagtatctgtcccaggcactttgtcgacaagagtaggaaaagtgccttcgagcttcttgagggacaagaagttggctcctgattcagatccgcctagcatgcaagatgtcaaccttttgtaccagtttttcgatcaaagtactaagctagtggtattgactggagctggaattagcacagaatgtggtattcccgactacagaagtccaaatggagcttacagttctggtttcaaaccaattacccatcaggagtttctccgctctagtcgggctcgtaggcgttattgggcaaggagttatgctgggtggagaagatttaatgctgcgcagcccagtgcagctcatattgctttatcatcactagaaaaagctggtcgggttaacttgatgattacgcaaaatgttgataggttgcatcaccgtgctggtagcaatccagttgaattgcatggaactgtttattccgtgatttgtatagattgtggtttttccttttgccggcatatatttcaggatcaacttaaggcccttaatccaaagtgggcagaggcaatcgaaagtttggactatggcaaccctggatcagacaagagctttggcatgaagcaaaggcctgatggtgacattgagattgatgaaaaattttgggaggagaattttcacatccctacatgccaaaagtgcaacggagtgctgaagcctgatgttgtcttctttggtgacaatgtccccaaggacagagctgataaggcaatccaagctgcaaaagaatgtgatgcttttcttgtactaggttcatctgtaatgaccatgtctgcttttcgacttgtcagagctgcacatgaggcaggtgctgccactgcaattgtaaatgttggagtgactcgagctgataattttgtacctttgaaaatcaatgctcgactaggagagattttgccaagagtgcttcacatgggatccctcagcgttcctgctatttgcaatgctctcattgaattttcaaatccccataaaggtggtgacggcgacgctcacagaggtggtgctggtggtcatctcccttttctaaccacggaagttgggtcgttgagagccgtttgcggcgccgaagcgggatggtgggtccatgagatattgttgggttgccaggcgggtttagatggctgcgaggtggtggagaaggaggagcttttgttattttggtcgttgagctatttggggtggttagatctgagacccatatcgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031347 GO:0031348 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0043966 GO:0043970 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050896 GO:0051276 GO:0051704 GO:0051707 GO:0061647 GO:0065007 GO:0071704 GO:0071840 GO:0080134 GO:0098542 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SIR2

Protein Analysis

632

Amino Acids

70.25

Weight (kDa)

8.13

Isoelectric Point (pI)

43.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SIR2	PF02146	270 - 485	4.3e-41	Sir2 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002661)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09230 AT5G09230 AT5G09230 AT5G09230 AT5G09230 AT5G09230 AT5G09230
fragaria_vesca	FvH4_1g24990 FvH4_1g24990 FvH4_1g24990 FvH4_1g24990 FvH4_1g24990 FvH4_1g24990 FvH4_1g24990 FvH4_1g24990 FvH4_1g24990 FvH4_1g24990 FvH4_1g24990 FvH4_1g24990 FvH4_1g24990 FvH4_1g24990
malus_domestica	MD00G1091800.v1.1
prunus_persica	Prupe.4G275900_v2.0.a1 Prupe.4G275900_v2.0.a1
pyrus_communis	pycom01g00050
rosa_chinensis	RchiOBHm_Chr2g0122631
rosa_laevigata	RLG00000018696
rosa_multiflora	Rmu_sc0003133.1_g000010
rosa_roxburghii	Rroxscaffold_2G00121420 Rroxscaffold_4G00314940
rosa_rugosa	Rorug02G0240200 Rorug02G0240300 Rorug02G0240400 Rorug02G0240500 Rorug02G0240600
rosa_samantha	Rh2AG298700 Rh2BG307600 Rh2CG285700 Rh2DG322300
rosa_wichuraiana	Rw2G023750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1487
AatII	GACGTC	1 cut(s)	123
Acc16I	TGCGCA	1 cut(s)	975
Acc36I	ACCTGC	3 cut(s)	67, 367, 1487
AccB1I	GGYRCC	1 cut(s)	1754
AccB7I	CCANNNNNTGG	1 cut(s)	170
AccBSI	CCGCTC	1 cut(s)	909
AccI	GTMKAC	1 cut(s)	671
AciI	CCGC	6 cut(s)	135, 737, 907, 1752, 1763, 1802
AclWI	GGATC	7 cut(s)	428, 450, 728, 1170, 1237, 1602, 1615
AcoI	YGGCCR	3 cut(s)	41, 136, 416
AcsI	RAATTY	3 cut(s)	1289, 1303, 1646
AcuI	CTGAAG	1 cut(s)	1364
AcyI	GRCGYC	2 cut(s)	120, 1755
AfaI	GTAC	4 cut(s)	767, 787, 1437, 1551
AfiI	CCNNNNNNNGG	7 cut(s)	105, 170, 261, 280, 312, 1146, 1664
AflII	CTTAAG	1 cut(s)	1169
AjnI	CCWGG	6 cut(s)	71, 223, 305, 658, 1225, 1797
AleI	CACNNNNGTG	1 cut(s)	1689
Alw26I	GTCTC	4 cut(s)	189, 275, 296, 1879
AlwI	GGATC	7 cut(s)	428, 450, 728, 1170, 1237, 1602, 1615
AlwNI	CAGNNNCTG	2 cut(s)	82, 1502
Ama87I	CYCGRG	2 cut(s)	192, 1533
AoxI	GGCC	7 cut(s)	41, 136, 149, 342, 416, 1173, 1259
ApeKI	GCWGC	9 cut(s)	110, 113, 971, 976, 986, 1409, 1484, 1502, 1815
ApoI	RAATTY	3 cut(s)	1289, 1303, 1646
ArsI	GACNNNNNNTTYG	2 cut(s)	1226, 1258
AspLEI	GCGC	2 cut(s)	976, 1757
AspS9I	GGNCC	5 cut(s)	220, 342, 509, 1174, 1774
AsuC2I	CCSGG	1 cut(s)	281
AsuHPI	GGTGA	8 cut(s)	23, 68, 137, 269, 1058, 1280, 1379, 1682
AvaI	CYCGRG	2 cut(s)	192, 1533
AvaII	GGWCC	3 cut(s)	220, 509, 1774
BaeGI	GKGCMC	1 cut(s)	72
BaeI	ACNNNNGTAYC	2 cut(s)	633, 666
BalI	TGGCCA	2 cut(s)	43, 418
BamHI	GGATCC	1 cut(s)	1607
BanI	GGYRCC	1 cut(s)	1754
BanII	GRGCYC	1 cut(s)	922
BbsI	GAAGAC	1 cut(s)	1351
BbvCI	CCTCAGC	2 cut(s)	146, 1613
BbvI	GCAGC	9 cut(s)	97, 125, 958, 988, 998, 1396, 1471, 1489, 1802
BccI	CCATC	9 cut(s)	8, 52, 122, 164, 282, 900, 1259, 1761, 1805
BceAI	ACGGC	2 cut(s)	1690, 1730
BciT130I	CCWGG	6 cut(s)	73, 225, 307, 660, 1227, 1799
BclI	TGATCA	1 cut(s)	3
BcnI	CCSGG	1 cut(s)	281
BcoDI	GTCTC	4 cut(s)	189, 275, 296, 1879
BfaI	CTAG	7 cut(s)	522, 741, 794, 912, 1010, 1439, 1574
BfmI	CTRYAG	2 cut(s)	111, 844
BfoI	RGCGCY	1 cut(s)	1758
BfrI	CTTAAG	1 cut(s)	1169
BfuAI	ACCTGC	3 cut(s)	67, 367, 1487
BglII	AGATCT	1 cut(s)	1879
BmcAI	AGTACT	1 cut(s)	787
Bme1390I	CCNGG	7 cut(s)	73, 225, 281, 307, 660, 1227, 1799
Bme18I	GGWCC	3 cut(s)	220, 509, 1774
BmeT110I	CYCGRG	2 cut(s)	192, 1533
BmgT120I	GGNCC	5 cut(s)	220, 342, 509, 1174, 1774
BmiI	GGNNCC	7 cut(s)	221, 222, 511, 723, 1609, 1756, 1775
BmrFI	CCNGG	7 cut(s)	73, 225, 281, 307, 660, 1227, 1799
BmrI	ACTGGG	1 cut(s)	975
BmsI	GCATC	3 cut(s)	250, 1072, 1414
BmuI	ACTGGG	1 cut(s)	975
BpiI	GAAGAC	1 cut(s)	1351
BpmI	CTGGAG	1 cut(s)	828
Bpu10I	CCTNAGC	3 cut(s)	146, 331, 1613
BpuEI	CTTGAG	1 cut(s)	724
BpuMI	CCSGG	1 cut(s)	281
BsaBI	GATNNNNATC	2 cut(s)	240, 732
BsaHI	GRCGYC	2 cut(s)	120, 1755
BsaI	GGTCTC	2 cut(s)	189, 1879
BsaJI	CCNNGG	7 cut(s)	71, 99, 223, 658, 1225, 1380, 1722
BsaWI	WCCGGW	1 cut(s)	506
BsaXI	ACNNNNNCTCC	4 cut(s)	307, 337, 1829, 1859
Bsc4I	CCNNNNNNNGG	7 cut(s)	105, 170, 261, 280, 312, 1146, 1664
Bse118I	RCCGGY	1 cut(s)	1146
Bse1I	ACTGG	5 cut(s)	399, 769, 811, 981, 1085
Bse3DI	GCAATG	1 cut(s)	1639
Bse8I	GATNNNNATC	2 cut(s)	240, 732
BseBI	CCWGG	6 cut(s)	73, 225, 307, 660, 1227, 1799
BseDI	CCNNGG	7 cut(s)	71, 99, 223, 658, 1225, 1380, 1722
BseGI	GGATG	2 cut(s)	1311, 1772
BseJI	GATNNNNATC	2 cut(s)	240, 732
BseLI	CCNNNNNNNGG	7 cut(s)	105, 170, 261, 280, 312, 1146, 1664
BseMI	GCAATG	1 cut(s)	1639
BseMII	CTCAG	4 cut(s)	137, 633, 1627, 1874
BseNI	ACTGG	5 cut(s)	399, 769, 811, 981, 1085
BseRI	GAGGAG	3 cut(s)	331, 1313, 1850
BseSI	GKGCMC	1 cut(s)	72
BseXI	GCAGC	9 cut(s)	97, 125, 958, 988, 998, 1396, 1471, 1489, 1802
BseYI	CCCAGC	2 cut(s)	210, 950
BsgI	GTGCAG	2 cut(s)	1005, 1470
BshFI	GGCC	7 cut(s)	43, 138, 151, 344, 418, 1175, 1261
BshNI	GGYRCC	1 cut(s)	1754
BsiHKCI	CYCGRG	2 cut(s)	192, 1533
BsiSI	CCGG	4 cut(s)	255, 280, 507, 1147
BslFI	GGGAC	5 cut(s)	233, 495, 641, 722, 1361
BslI	CCNNNNNNNGG	7 cut(s)	105, 170, 261, 280, 312, 1146, 1664
BsmAI	GTCTC	4 cut(s)	189, 275, 296, 1879
BsmFI	GGGAC	5 cut(s)	233, 495, 641, 722, 1361
BsnI	GGCC	7 cut(s)	43, 138, 151, 344, 418, 1175, 1261
Bso31I	GGTCTC	2 cut(s)	189, 1879
BsoBI	CYCGRG	2 cut(s)	192, 1533
Bsp1286I	GDGCHC	2 cut(s)	72, 922
Bsp19I	CCATGG	1 cut(s)	99
BspACI	CCGC	6 cut(s)	135, 737, 907, 1752, 1763, 1802
BspANI	GGCC	7 cut(s)	43, 138, 151, 344, 418, 1175, 1261
BspCNI	CTCAG	4 cut(s)	138, 632, 1626, 1875
BspHI	TCATGA	1 cut(s)	540
BspLI	GGNNCC	7 cut(s)	221, 222, 511, 723, 1609, 1756, 1775
BspMAI	CTGCAG	1 cut(s)	115
BspMI	ACCTGC	3 cut(s)	67, 367, 1487
BspPI	GGATC	7 cut(s)	428, 450, 728, 1170, 1237, 1602, 1615
BspQI	GCTCTTC	1 cut(s)	200
BspT107I	GGYRCC	1 cut(s)	1754
BspTI	CTTAAG	1 cut(s)	1169
BspTNI	GGTCTC	2 cut(s)	189, 1879
BsrBI	CCGCTC	1 cut(s)	909
BsrDI	GCAATG	1 cut(s)	1639
BsrFI	RCCGGY	1 cut(s)	1146
BsrI	ACTGG	5 cut(s)	399, 769, 811, 981, 1085
BssAI	RCCGGY	1 cut(s)	1146
BssECI	CCNNGG	7 cut(s)	71, 99, 223, 658, 1225, 1380, 1722
BssNI	GRCGYC	2 cut(s)	120, 1755
BssT1I	CCWWGG	2 cut(s)	99, 1380
Bst2UI	CCWGG	6 cut(s)	73, 225, 307, 660, 1227, 1799
Bst4CI	ACNGT	4 cut(s)	389, 869, 1070, 1105
Bst6I	CTCTTC	2 cut(s)	200, 592
BstACI	GRCGYC	2 cut(s)	120, 1755
BstAFI	CTTAAG	1 cut(s)	1169
BstAPI	GCANNNNNTGC	1 cut(s)	1502
BstC8I	GCNNGC	2 cut(s)	746, 1148
BstDEI	CTNAG	8 cut(s)	146, 158, 331, 346, 619, 789, 1613, 1883
BstDSI	CCRYGG	2 cut(s)	99, 1722
BstF5I	GGATG	2 cut(s)	1311, 1772
BstH2I	RGCGCY	1 cut(s)	1758
BstHHI	GCGC	2 cut(s)	976, 1757
BstMAI	GTCTC	4 cut(s)	189, 275, 296, 1879
BstMWI	GCNNNNNNNGC	9 cut(s)	745, 995, 1329, 1397, 1406, 1493, 1502, 1508, 1594
BstNI	CCWGG	6 cut(s)	73, 225, 307, 660, 1227, 1799
BstNSI	RCATGY	2 cut(s)	748, 1323
BstSCI	CCNGG	7 cut(s)	71, 223, 279, 305, 658, 1225, 1797
BstSFI	CTRYAG	2 cut(s)	111, 844
BstSLI	GKGCMC	1 cut(s)	72
BstV1I	GCAGC	9 cut(s)	97, 125, 958, 988, 998, 1396, 1471, 1489, 1802
BstV2I	GAAGAC	1 cut(s)	1351
BstX2I	RGATCY	4 cut(s)	442, 733, 1607, 1879
BstXI	CCANNNNNNTGG	1 cut(s)	1667
BstYI	RGATCY	4 cut(s)	442, 733, 1607, 1879
BsuRI	GGCC	7 cut(s)	43, 138, 151, 344, 418, 1175, 1261
BtgI	CCRYGG	2 cut(s)	99, 1722
BtsCI	GGATG	2 cut(s)	1311, 1772
BtsI	GCAGTG	1 cut(s)	1506
BtsIMutI	CAGTG	4 cut(s)	394, 627, 988, 1506
BveI	ACCTGC	3 cut(s)	67, 367, 1487
Cac8I	GCNNGC	2 cut(s)	746, 1148
CaiI	CAGNNNCTG	2 cut(s)	82, 1502
CciI	TCATGA	1 cut(s)	540
CfoI	GCGC	2 cut(s)	976, 1757
Cfr10I	RCCGGY	1 cut(s)	1146
Cfr13I	GGNCC	5 cut(s)	220, 342, 509, 1174, 1774
CseI	GACGC	1 cut(s)	1688
Csp6I	GTAC	4 cut(s)	766, 786, 1436, 1550
CspCI	CAANNNNNGTGG	6 cut(s)	341, 376, 1495, 1530, 1711, 1746
CviQI	GTAC	4 cut(s)	766, 786, 1436, 1550
DdeI	CTNAG	8 cut(s)	146, 158, 331, 346, 619, 789, 1613, 1883
DinI	GGCGCC	1 cut(s)	1756
EaeI	YGGCCR	3 cut(s)	41, 136, 416
Eam1104I	CTCTTC	2 cut(s)	200, 592
EarI	CTCTTC	2 cut(s)	200, 592
EciI	GGCGGA	1 cut(s)	726
Eco130I	CCWWGG	2 cut(s)	99, 1380
Eco147I	AGGCCT	1 cut(s)	1261
Eco24I	GRGCYC	1 cut(s)	922
Eco31I	GGTCTC	2 cut(s)	189, 1879
Eco47I	GGWCC	3 cut(s)	220, 509, 1774
Eco57I	CTGAAG	1 cut(s)	1364
Eco88I	CYCGRG	2 cut(s)	192, 1533
EcoO109I	RGGNCCY	2 cut(s)	220, 1174
EcoRII	CCWGG	6 cut(s)	71, 223, 305, 658, 1225, 1797
EcoT14I	CCWWGG	2 cut(s)	99, 1380
EcoT38I	GRGCYC	1 cut(s)	922
EgeI	GGCGCC	1 cut(s)	1756
EheI	GGCGCC	1 cut(s)	1756
ErhI	CCWWGG	2 cut(s)	99, 1380
FaqI	GGGAC	5 cut(s)	233, 495, 641, 722, 1361
FauI	CCCGC	2 cut(s)	1756, 1795
FbaI	TGATCA	1 cut(s)	3
FblI	GTMKAC	1 cut(s)	671
FokI	GGATG	2 cut(s)	1298, 1779
FriOI	GRGCYC	1 cut(s)	922
FspBI	CTAG	7 cut(s)	522, 741, 794, 912, 1010, 1439, 1574
FspI	TGCGCA	1 cut(s)	975
GlaI	GCGC	2 cut(s)	975, 1756
GsaI	CCCAGC	2 cut(s)	214, 954
GsuI	CTGGAG	1 cut(s)	828
HaeII	RGCGCY	1 cut(s)	1758
HaeIII	GGCC	7 cut(s)	43, 138, 151, 344, 418, 1175, 1261
HapII	CCGG	4 cut(s)	255, 280, 507, 1147
HgaI	GACGC	1 cut(s)	1688
HhaI	GCGC	2 cut(s)	976, 1757
Hin1I	GRCGYC	2 cut(s)	120, 1755
Hin6I	GCGC	2 cut(s)	974, 1755
HinP1I	GCGC	2 cut(s)	974, 1755
HincII	GTYRAC	3 cut(s)	672, 757, 1030
HindII	GTYRAC	3 cut(s)	672, 757, 1030
HinfI	GANTC	3 cut(s)	600, 728, 1531
HpaI	GTTAAC	1 cut(s)	1030
HpaII	CCGG	4 cut(s)	255, 280, 507, 1147
HphI	GGTGA	8 cut(s)	23, 68, 137, 269, 1058, 1280, 1379, 1682
Hpy166II	GTNNAC	5 cut(s)	96, 392, 672, 757, 1030
Hpy188I	TCNGA	6 cut(s)	84, 296, 733, 1234, 1481, 1884
Hpy188III	TCNNGA	9 cut(s)	192, 383, 431, 541, 703, 725, 839, 896, 1160
Hpy8I	GTNNAC	5 cut(s)	96, 392, 672, 757, 1030
Hpy99I	CGWCG	2 cut(s)	125, 1682
HpyAV	CCTTC	2 cut(s)	702, 1825
HpyCH4III	ACNGT	4 cut(s)	389, 869, 1070, 1105
HpyCH4IV	ACGT	1 cut(s)	120
HpyF10VI	GCNNNNNNNGC	9 cut(s)	745, 995, 1329, 1397, 1406, 1493, 1502, 1508, 1594
HpyF3I	CTNAG	8 cut(s)	146, 158, 331, 346, 619, 789, 1613, 1883
HpySE526I	ACGT	1 cut(s)	120
Hsp92I	GRCGYC	2 cut(s)	120, 1755
HspAI	GCGC	2 cut(s)	974, 1755
KasI	GGCGCC	1 cut(s)	1754
KflI	GGGWCCC	1 cut(s)	220
KroI	GCCGGC	1 cut(s)	1146
KroNI	GCCGGC	1 cut(s)	1148
Ksp22I	TGATCA	1 cut(s)	3
KspAI	GTTAAC	1 cut(s)	1030
LguI	GCTCTTC	1 cut(s)	200
LmnI	GCTCC	4 cut(s)	727, 809, 860, 1837
Lsp1109I	GCAGC	9 cut(s)	97, 125, 958, 988, 998, 1396, 1471, 1489, 1802
LweI	GCATC	3 cut(s)	250, 1072, 1414
MaeI	CTAG	7 cut(s)	522, 741, 794, 912, 1010, 1439, 1574
MaeII	ACGT	1 cut(s)	120
MaeIII	GTNAC	5 cut(s)	56, 1268, 1367, 1528, 1670
MbiI	CCGCTC	1 cut(s)	909
MboII	GAAGA	4 cut(s)	217, 609, 972, 1351
MfeI	CAATTG	3 cut(s)	165, 371, 1512
MflI	RGATCY	4 cut(s)	442, 733, 1607, 1879
MhlI	GDGCHC	2 cut(s)	72, 922
MlsI	TGGCCA	2 cut(s)	43, 418
MluNI	TGGCCA	2 cut(s)	43, 418
Mly113I	GGCGCC	1 cut(s)	1755
MlyI	GAGTC	2 cut(s)	609, 1525
MmeI	TCCRAC	2 cut(s)	319, 1504
Mox20I	TGGCCA	2 cut(s)	43, 418
MroNI	GCCGGC	1 cut(s)	1146
MscI	TGGCCA	2 cut(s)	43, 418
MseI	TTAA	4 cut(s)	966, 1029, 1170, 1179
MslI	CAYNNNNRTG	3 cut(s)	1068, 1665, 1689
Msp20I	TGGCCA	2 cut(s)	43, 418
MspCI	CTTAAG	1 cut(s)	1169
MspI	CCGG	4 cut(s)	255, 280, 507, 1147
MspR9I	CCNGG	7 cut(s)	73, 225, 281, 307, 660, 1227, 1799
MunI	CAATTG	3 cut(s)	165, 371, 1512
MvaI	CCWGG	6 cut(s)	73, 225, 307, 660, 1227, 1799
MwoI	GCNNNNNNNGC	9 cut(s)	745, 995, 1329, 1397, 1406, 1493, 1502, 1508, 1594
NaeI	GCCGGC	1 cut(s)	1148
NarI	GGCGCC	1 cut(s)	1755
NciI	CCSGG	1 cut(s)	281
NcoI	CCATGG	1 cut(s)	99
NgoMIV	GCCGGC	1 cut(s)	1146
NlaIV	GGNNCC	7 cut(s)	221, 222, 511, 723, 1609, 1756, 1775
NmuCI	GTSAC	5 cut(s)	56, 1268, 1367, 1528, 1670
NsbI	TGCGCA	1 cut(s)	975
NspI	RCATGY	2 cut(s)	748, 1323
OliI	CACNNNNGTG	1 cut(s)	1689
PaeI	GCATGC	1 cut(s)	748
PaeR7I	CTCGAG	1 cut(s)	1533
PagI	TCATGA	1 cut(s)	540
PaqCI	CACCTGC	1 cut(s)	1487
PceI	AGGCCT	1 cut(s)	1261
PciSI	GCTCTTC	1 cut(s)	200
PcsI	WCGNNNNNNNCGW	1 cut(s)	60
PdiI	GCCGGC	1 cut(s)	1148
PfeI	GAWTC	1 cut(s)	728
PflFI	GACNNNGTC	2 cut(s)	1373, 1459
PflMI	CCANNNNNTGG	1 cut(s)	170
PfoI	TCCNGGA	1 cut(s)	305
PleI	GAGTC	2 cut(s)	608, 1525
PluTI	GGCGCC	1 cut(s)	1758
PpsI	GAGTC	2 cut(s)	608, 1525
PpuMI	RGGWCCY	1 cut(s)	220
Psp5II	RGGWCCY	1 cut(s)	220
Psp6I	CCWGG	6 cut(s)	71, 223, 305, 658, 1225, 1797
PspFI	CCCAGC	2 cut(s)	210, 950
PspGI	CCWGG	6 cut(s)	71, 223, 305, 658, 1225, 1797
PspN4I	GGNNCC	7 cut(s)	221, 222, 511, 723, 1609, 1756, 1775
PspPI	GGNCC	5 cut(s)	220, 342, 509, 1174, 1774
PspPPI	RGGWCCY	1 cut(s)	220
PspXI	VCTCGAGB	1 cut(s)	1533
PstI	CTGCAG	1 cut(s)	115
PstNI	CAGNNNCTG	2 cut(s)	82, 1502
PsuI	RGATCY	4 cut(s)	442, 733, 1607, 1879
PsyI	GACNNNGTC	2 cut(s)	1373, 1459
RsaI	GTAC	4 cut(s)	767, 787, 1437, 1551
RsaNI	GTAC	4 cut(s)	766, 786, 1436, 1550
RseI	CAYNNNNRTG	3 cut(s)	1068, 1665, 1689
SalI	GTCGAC	1 cut(s)	670
SapI	GCTCTTC	1 cut(s)	200
SaqAI	TTAA	4 cut(s)	966, 1029, 1170, 1179
Sau96I	GGNCC	5 cut(s)	220, 342, 509, 1174, 1774
ScaI	AGTACT	1 cut(s)	787
SchI	GAGTC	2 cut(s)	609, 1525
ScrFI	CCNGG	7 cut(s)	73, 225, 281, 307, 660, 1227, 1799
SduI	GDGCHC	2 cut(s)	72, 922
SfaNI	GCATC	3 cut(s)	250, 1072, 1414
SfcI	CTRYAG	2 cut(s)	111, 844
SfoI	GGCGCC	1 cut(s)	1756
Sfr274I	CTCGAG	1 cut(s)	1533
SinI	GGWCC	3 cut(s)	220, 509, 1774
SlaI	CTCGAG	1 cut(s)	1533
SmiMI	CAYNNNNRTG	3 cut(s)	1068, 1665, 1689
SmlI	CTYRAG	3 cut(s)	703, 1169, 1533
SmoI	CTYRAG	3 cut(s)	703, 1169, 1533
SphI	GCATGC	1 cut(s)	748
SseBI	AGGCCT	1 cut(s)	1261
SsiI	CCGC	6 cut(s)	135, 737, 907, 1752, 1763, 1802
SspDI	GGCGCC	1 cut(s)	1754
SspMI	CTAG	7 cut(s)	522, 741, 794, 912, 1010, 1439, 1574
StuI	AGGCCT	1 cut(s)	1261
StyD4I	CCNGG	7 cut(s)	71, 223, 279, 305, 658, 1225, 1797
StyI	CCWWGG	2 cut(s)	99, 1380
TaaI	ACNGT	4 cut(s)	389, 869, 1070, 1105
TaiI	ACGT	1 cut(s)	123
TaqI	TCGA	7 cut(s)	671, 695, 777, 1203, 1471, 1534, 1570
TatI	WGTACW	2 cut(s)	785, 1435
TauI	GCSGC	2 cut(s)	138, 1755
TfiI	GAWTC	1 cut(s)	728
Tru1I	TTAA	4 cut(s)	966, 1029, 1170, 1179
Tru9I	TTAA	4 cut(s)	966, 1029, 1170, 1179
TscAI	CASTG	4 cut(s)	394, 627, 988, 1513
TseFI	GTSAC	5 cut(s)	56, 1268, 1367, 1528, 1670
TseI	GCWGC	9 cut(s)	110, 113, 971, 976, 986, 1409, 1484, 1502, 1815
Tsp45I	GTSAC	5 cut(s)	56, 1268, 1367, 1528, 1670
TspDTI	ATGAA	3 cut(s)	1265, 1299, 1434
TspGWI	ACGGA	3 cut(s)	1102, 1350, 1739
TspRI	CASTG	4 cut(s)	394, 627, 988, 1513
Tth111I	GACNNNGTC	2 cut(s)	1373, 1459
Van91I	CCANNNNNTGG	1 cut(s)	170
Vha464I	CTTAAG	1 cut(s)	1169
VpaK11BI	GGWCC	3 cut(s)	220, 509, 1774
XapI	RAATTY	3 cut(s)	1289, 1303, 1646
XceI	RCATGY	2 cut(s)	748, 1323
XhoI	CTCGAG	1 cut(s)	1533
XmiI	GTMKAC	1 cut(s)	671
XspI	CTAG	7 cut(s)	522, 741, 794, 912, 1010, 1439, 1574
ZraI	GACGTC	1 cut(s)	121
ZrmI	AGTACT	1 cut(s)	787

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.