Rmu_sc0005023.1_g000013

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005023.1
OG0012165
Physical Location & Seq
Reverse (-)
68020 .. 72687
4668 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1689 bp
atgacctcctctccccattctcctcctcctaacagcgttaatcgctccaagactttccaaaatcctggaattttcgtgttgatgaaatccggcgatctccgccaaacgacgccgtgtaaggataagctgccggtgaaattggagatcgaagactccttggaggaggagcacggccccctcaacaagcgctgcaaaccctctcctgcttttcatgagagttcgggcgataatgggtttgctgtcccagctccccaatacaatccacttgatgagcctagccctttgggtttgaggctcaggaagagcccgtctttattggaattaattcaaatgaagcttgctcaggggggtcctcctgcagcgggagatgtaccaagagaaaatcttaactctggagttaagaaggagattaaagcaaatgctgcggtgggggctactgataagcttaaagcgtcaaattttccagcttcaatgttaaggatcggtagctgggagtacaaatcaaggtacgagggtgatttagtggcaaagtgttattttgcaaagcataagctcgtatgggaggttcttgaaggaggcctcaagagcaaaatagaaatccagtggtcagatatcatggccctgaaagcaaactgtcctgatgatggacctggtactttgaatgttgtgttggctagacaacctctgttcttcagggagactaatcctcagcctagaaagcatactttatggcaagcaacctcagattttactgatgggcaagcaagcctgcataggcaacattttctgcaatgcccacaaggactgttaaacaagcattttgaaaagcttattcagtgtgacacacgtctttgcttcttaagtcgacagccagagatcgttttggattcaccttattttgaactgcggccttctgtatttgaagaccaaggagaatccaaaggccttggttttgaccaaccggcaagtggtaaaggatcctccatttctggtttccaggatatagcatcaccatctgcaagtcagtcatcatctttgaaggcagaccagcaggattcagctggtatgacattagagcatcggtccagagaagctccttcccctagctcaggaaatggaagttctgaagttgttgattccagggggccaagaaactgggaacagataaaagtgcctgggctccatccttcaatgtcgatgagtgattttatgagtcacattgggaactgtatttcagaacaaatgacttccggaaatcccccttctgccgatcaacagtcggaataccaggatattctcgaggacattgcgcagtacctgttaagtgacactcaattaactgcagcagatgagagtcatgagacatctctcatgtccagggtcaattctctttgttgccttttgcagaaggaccccacttctcttcagacttcgcaggttgaagttgaaggcacagatggtggaagggatattcagcttaaccacactcctggtggtatatctggagctgatatgcaggctcctgaagaggatatgaaggatgttcctggaggaaagaaggcaccgggaatgtcgagaaaagactccttcggggaattgctgtttcacctccctcgcatcgcctctcttccctcacttccaaaagtcttgttcaacatttcagaagattgtgagagtcaaggtagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

562

Amino Acids

61.41

Weight (kDa)

5.55

Isoelectric Point (pI)

57.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_TRF2_HOY1 PF24818 153 - 271 9.4e-62 TRF2/HOY1 PH-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24100 AT4G30780
fragaria_vesca FvH4_4g10180
malus_domestica MD00G1164000.v1.1 MD16G1259500.v1.1
prunus_persica Prupe.1G102300_v2.0.a1
pyrus_communis pycom13g28620 pycom16g22740
rosa_chinensis RchiOBHm_Chr4g0405561
rosa_laevigata RLG00000008836
rosa_multiflora Rmu_sc0005023.1_g000013
rosa_roxburghii Rroxscaffold_5G00350070
rosa_rugosa Rorug04G0060600 Rorug04G0060600
rosa_samantha Rh4AG132500 Rh4BG127400 Rh4CG140200 Rh4DG126800
rosa_wichuraiana Rw4G010730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1311
Acc36I ACCTGC 1 cut(s) 1426
AccB1I GGYRCC 1 cut(s) 1561
AccI GTMKAC 1 cut(s) 865
AccIII TCCGGA 1 cut(s) 1250
AciI CCGC 4 cut(s) 100, 362, 425, 907
AclWI GGATC 3 cut(s) 488, 972, 985
AcsI RAATTY 2 cut(s) 69, 457
AcuI CTGAAG 4 cut(s) 676, 1146, 1409, 1545
AcyI GRCGYC 1 cut(s) 110
AfaI GTAC 5 cut(s) 372, 497, 509, 655, 1316
AfeI AGCGCT 1 cut(s) 188
AfiI CCNNNNNNNGG 4 cut(s) 362, 644, 968, 1109
AflII CTTAAG 1 cut(s) 859
AflIII ACRYGT 1 cut(s) 845
AjiI CACGTC 1 cut(s) 848
AjnI CCWGG 9 cut(s) 64, 649, 996, 1139, 1174, 1287, 1376, 1489, 1546
AjuI GAANNNNNNNTTGG 2 cut(s) 653, 685
Alw21I GWGCWC 1 cut(s) 171
Alw26I GTCTC 2 cut(s) 692, 1355
AlwI GGATC 3 cut(s) 488, 972, 985
AlwNI CAGNNNCTG 1 cut(s) 1318
Ama87I CYCGRG 1 cut(s) 1298
Aor13HI TCCGGA 1 cut(s) 1250
Aor51HI AGCGCT 1 cut(s) 188
AoxI GGCC 6 cut(s) 172, 577, 618, 908, 943, 1145
ApeKI GCWGC 5 cut(s) 127, 189, 359, 422, 1343
ApoI RAATTY 2 cut(s) 69, 457
AseI ATTAAT 1 cut(s) 323
Asp700I GAANNNNTTC 1 cut(s) 324
AspLEI GCGC 2 cut(s) 189, 1312
AspS9I GGNCC 7 cut(s) 173, 350, 619, 647, 1083, 1145, 1411
AsuC2I CCSGG 1 cut(s) 1566
AsuHPI GGTGA 5 cut(s) 145, 527, 882, 1002, 1598
AvaI CYCGRG 1 cut(s) 1298
AvaII GGWCC 4 cut(s) 350, 647, 1083, 1411
BaeI ACNNNNGTAYC 2 cut(s) 499, 532
BamHI GGATCC 1 cut(s) 977
BanI GGYRCC 1 cut(s) 1561
BanII GRGCYC 2 cut(s) 308, 1182
BbsI GAAGAC 2 cut(s) 156, 930
Bbv12I GWGCWC 1 cut(s) 171
BbvCI CCTCAGC 1 cut(s) 708
BbvI GCAGC 5 cut(s) 114, 176, 371, 409, 1355
BccI CCATC 5 cut(s) 638, 749, 1021, 1191, 1451
BceAI ACGGC 2 cut(s) 97, 187
BcgI CGANNNNNNTGC 2 cut(s) 1289, 1323
BciT130I CCWGG 9 cut(s) 66, 651, 998, 1141, 1176, 1289, 1378, 1491, 1548
BcnI CCSGG 1 cut(s) 1566
BcoDI GTCTC 2 cut(s) 692, 1355
BfaI CTAG 4 cut(s) 276, 675, 714, 1104
BfmI CTRYAG 2 cut(s) 357, 1341
BfoI RGCGCY 1 cut(s) 190
BfrI CTTAAG 1 cut(s) 859
BfuAI ACCTGC 1 cut(s) 1426
BisI GCNGC 6 cut(s) 128, 190, 360, 423, 908, 1344
BlsI GCNGC 6 cut(s) 129, 191, 361, 424, 909, 1345
Bme18I GGWCC 4 cut(s) 350, 647, 1083, 1411
BmeT110I CYCGRG 1 cut(s) 1298
BmgBI CACGTC 1 cut(s) 848
BmgT120I GGNCC 7 cut(s) 173, 350, 619, 647, 1083, 1145, 1411
BmiI GGNNCC 8 cut(s) 175, 351, 979, 1146, 1181, 1413, 1521, 1563
BmrI ACTGGG 1 cut(s) 1165
BmsI GCATC 3 cut(s) 1016, 1087, 1626
BmuI ACTGGG 1 cut(s) 1165
BoxI GACNNNNGTC 1 cut(s) 846
BpiI GAAGAC 2 cut(s) 156, 930
BpmI CTGGAG 3 cut(s) 414, 1524, 1569
Bpu10I CCTNAGC 4 cut(s) 296, 342, 708, 1108
BpuEI CTTGAG 1 cut(s) 566
BpuMI CCSGG 1 cut(s) 1566
BsaHI GRCGYC 1 cut(s) 110
BsaJI CCNNGG 6 cut(s) 156, 928, 946, 1140, 1175, 1377
BsaWI WCCGGW 1 cut(s) 1250
BsaXI ACNNNNNCTCC 1 cut(s) 25
Bsc4I CCNNNNNNNGG 4 cut(s) 362, 644, 968, 1109
Bse118I RCCGGY 2 cut(s) 130, 961
Bse1I ACTGG 2 cut(s) 601, 1160
Bse3DI GCAATG 2 cut(s) 797, 1305
BseAI TCCGGA 1 cut(s) 1250
BseBI CCWGG 9 cut(s) 66, 651, 998, 1141, 1176, 1289, 1378, 1491, 1548
BseDI CCNNGG 6 cut(s) 156, 928, 946, 1140, 1175, 1377
BseGI GGATG 2 cut(s) 1183, 1546
BseLI CCNNNNNNNGG 4 cut(s) 362, 644, 968, 1109
BseMI GCAATG 2 cut(s) 797, 1305
BseMII CTCAG 5 cut(s) 310, 356, 722, 756, 1122
BseNI ACTGG 2 cut(s) 601, 1160
BseRI GAGGAG 4 cut(s) 12, 15, 176, 179
BseXI GCAGC 5 cut(s) 114, 176, 371, 409, 1355
BseYI CCCAGC 2 cut(s) 244, 489
BshFI GGCC 6 cut(s) 174, 579, 620, 910, 945, 1147
BshNI GGYRCC 1 cut(s) 1561
BsiHKAI GWGCWC 1 cut(s) 171
BsiHKCI CYCGRG 1 cut(s) 1298
BsiSI CCGG 5 cut(s) 90, 131, 962, 1251, 1565
BslFI GGGAC 1 cut(s) 227
BslI CCNNNNNNNGG 4 cut(s) 362, 644, 968, 1109
BsmAI GTCTC 2 cut(s) 692, 1355
BsmFI GGGAC 1 cut(s) 227
BsnI GGCC 6 cut(s) 174, 579, 620, 910, 945, 1147
BsoBI CYCGRG 1 cut(s) 1298
Bsp1286I GDGCHC 3 cut(s) 171, 308, 1182
Bsp13I TCCGGA 1 cut(s) 1250
Bsp143I GATC 6 cut(s) 94, 144, 480, 876, 977, 1270
BspACI CCGC 4 cut(s) 100, 362, 425, 907
BspANI GGCC 6 cut(s) 174, 579, 620, 910, 945, 1147
BspCNI CTCAG 5 cut(s) 309, 355, 721, 755, 1121
BspEI TCCGGA 1 cut(s) 1250
BspHI TCATGA 2 cut(s) 211, 1357
BspLI GGNNCC 8 cut(s) 175, 351, 979, 1146, 1181, 1413, 1521, 1563
BspMAI CTGCAG 2 cut(s) 361, 1345
BspMI ACCTGC 1 cut(s) 1426
BspPI GGATC 3 cut(s) 488, 972, 985
BspQI GCTCTTC 1 cut(s) 296
BspT107I GGYRCC 1 cut(s) 1561
BspTI CTTAAG 1 cut(s) 859
BsrDI GCAATG 2 cut(s) 797, 1305
BsrFI RCCGGY 2 cut(s) 130, 961
BsrI ACTGG 2 cut(s) 601, 1160
BssAI RCCGGY 2 cut(s) 130, 961
BssECI CCNNGG 6 cut(s) 156, 928, 946, 1140, 1175, 1377
BssMI GATC 6 cut(s) 94, 144, 480, 876, 977, 1270
BssNI GRCGYC 1 cut(s) 110
BssT1I CCWWGG 3 cut(s) 156, 928, 946
Bst2UI CCWGG 9 cut(s) 66, 651, 998, 1141, 1176, 1289, 1378, 1491, 1548
Bst4CI ACNGT 4 cut(s) 635, 807, 1229, 1278
Bst6I CTCTTC 4 cut(s) 296, 1428, 1521, 1632
BstACI GRCGYC 1 cut(s) 110
BstAFI CTTAAG 1 cut(s) 859
BstAPI GCANNNNNTGC 1 cut(s) 422
BstC8I GCNNGC 6 cut(s) 339, 735, 762, 766, 770, 1518
BstDEI CTNAG 5 cut(s) 296, 342, 708, 742, 1108
BstENI CCTNNNNNAGG 1 cut(s) 1107
BstF5I GGATG 2 cut(s) 1183, 1546
BstH2I RGCGCY 1 cut(s) 190
BstHHI GCGC 2 cut(s) 189, 1312
BstKTI GATC 6 cut(s) 97, 147, 483, 879, 980, 1273
BstMAI GTCTC 2 cut(s) 692, 1355
BstMBI GATC 6 cut(s) 94, 144, 480, 876, 977, 1270
BstMWI GCNNNNNNNGC 8 cut(s) 42, 99, 245, 422, 431, 585, 626, 718
BstNI CCWGG 9 cut(s) 66, 651, 998, 1141, 1176, 1289, 1378, 1491, 1548
BstPAI GACNNNNGTC 1 cut(s) 846
BstSFI CTRYAG 2 cut(s) 357, 1341
BstV1I GCAGC 5 cut(s) 114, 176, 371, 409, 1355
BstV2I GAAGAC 2 cut(s) 156, 930
BstX2I RGATCY 1 cut(s) 977
BstXI CCANNNNNNTGG 3 cut(s) 65, 1155, 1490
BstYI RGATCY 1 cut(s) 977
BsuRI GGCC 6 cut(s) 174, 579, 620, 910, 945, 1147
BtgZI GCGATG 1 cut(s) 1603
BtrI CACGTC 1 cut(s) 848
BtsCI GGATG 2 cut(s) 1183, 1546
BtsIMutI CAGTG 2 cut(s) 608, 842
BveI ACCTGC 1 cut(s) 1426
Cac8I GCNNGC 6 cut(s) 339, 735, 762, 766, 770, 1518
CaiI CAGNNNCTG 1 cut(s) 1318
CciI TCATGA 2 cut(s) 211, 1357
CfoI GCGC 2 cut(s) 189, 1312
Cfr10I RCCGGY 2 cut(s) 130, 961
Cfr13I GGNCC 7 cut(s) 173, 350, 619, 647, 1083, 1145, 1411
CseI GACGC 2 cut(s) 118, 441
CsiI ACCWGGT 1 cut(s) 649
Csp6I GTAC 5 cut(s) 371, 496, 508, 654, 1315
CviAII CATG 4 cut(s) 212, 616, 1358, 1372
CviQI GTAC 5 cut(s) 371, 496, 508, 654, 1315
DdeI CTNAG 5 cut(s) 296, 342, 708, 742, 1108
DpnI GATC 6 cut(s) 96, 146, 482, 878, 979, 1272
DpnII GATC 6 cut(s) 94, 144, 480, 876, 977, 1270
Eam1104I CTCTTC 4 cut(s) 296, 1428, 1521, 1632
EarI CTCTTC 4 cut(s) 296, 1428, 1521, 1632
EciI GGCGGA 1 cut(s) 89
Eco130I CCWWGG 3 cut(s) 156, 928, 946
Eco147I AGGCCT 2 cut(s) 579, 945
Eco24I GRGCYC 2 cut(s) 308, 1182
Eco32I GATATC 1 cut(s) 613
Eco47I GGWCC 4 cut(s) 350, 647, 1083, 1411
Eco47III AGCGCT 1 cut(s) 188
Eco57I CTGAAG 4 cut(s) 676, 1146, 1409, 1545
Eco88I CYCGRG 1 cut(s) 1298
EcoNI CCTNNNNNAGG 1 cut(s) 1107
EcoO109I RGGNCCY 2 cut(s) 350, 1411
EcoRII CCWGG 9 cut(s) 64, 649, 996, 1139, 1174, 1287, 1376, 1489, 1546
EcoRV GATATC 1 cut(s) 613
EcoT14I CCWWGG 3 cut(s) 156, 928, 946
EcoT38I GRGCYC 2 cut(s) 308, 1182
ErhI CCWWGG 3 cut(s) 156, 928, 946
FaeI CATG 4 cut(s) 215, 619, 1361, 1375
FaqI GGGAC 1 cut(s) 227
FatI CATG 4 cut(s) 211, 615, 1357, 1371
FauI CCCGC 1 cut(s) 355
FblI GTMKAC 1 cut(s) 865
Fnu4HI GCNGC 6 cut(s) 128, 190, 360, 423, 908, 1344
FokI GGATG 2 cut(s) 1170, 1553
FriOI GRGCYC 2 cut(s) 308, 1182
Fsp4HI GCNGC 6 cut(s) 128, 190, 360, 423, 908, 1344
FspBI CTAG 4 cut(s) 276, 675, 714, 1104
FspI TGCGCA 1 cut(s) 1311
GlaI GCGC 2 cut(s) 188, 1311
GluI GCNGC 6 cut(s) 128, 190, 360, 423, 908, 1344
GsaI CCCAGC 2 cut(s) 248, 493
GsuI CTGGAG 3 cut(s) 414, 1524, 1569
HaeII RGCGCY 1 cut(s) 190
HaeIII GGCC 6 cut(s) 174, 579, 620, 910, 945, 1147
HapII CCGG 5 cut(s) 90, 131, 962, 1251, 1565
HgaI GACGC 2 cut(s) 118, 441
HhaI GCGC 2 cut(s) 189, 1312
Hin1I GRCGYC 1 cut(s) 110
Hin1II CATG 4 cut(s) 215, 619, 1361, 1375
Hin6I GCGC 2 cut(s) 187, 1310
HinP1I GCGC 2 cut(s) 187, 1310
HincII GTYRAC 1 cut(s) 866
HindII GTYRAC 1 cut(s) 866
HindIII AAGCTT 3 cut(s) 335, 443, 827
HinfI GANTC 9 cut(s) 152, 887, 935, 1055, 1136, 1213, 1354, 1583, 1675
HpaII CCGG 5 cut(s) 90, 131, 962, 1251, 1565
HphI GGTGA 5 cut(s) 145, 527, 882, 1002, 1598
Hpy166II GTNNAC 1 cut(s) 866
Hpy188I TCNGA 7 cut(s) 610, 745, 1126, 1237, 1282, 1428, 1663
Hpy8I GTNNAC 1 cut(s) 866
Hpy99I CGWCG 1 cut(s) 112
HpyCH4III ACNGT 4 cut(s) 635, 807, 1229, 1278
HpyCH4IV ACGT 1 cut(s) 847
HpyCH4V TGCA 9 cut(s) 192, 359, 542, 772, 790, 1019, 1343, 1405, 1516
HpyF10VI GCNNNNNNNGC 8 cut(s) 42, 99, 245, 422, 431, 585, 626, 718
HpyF3I CTNAG 5 cut(s) 296, 342, 708, 742, 1108
HpySE526I ACGT 1 cut(s) 847
Hsp92I GRCGYC 1 cut(s) 110
Hsp92II CATG 4 cut(s) 215, 619, 1361, 1375
HspAI GCGC 2 cut(s) 187, 1310
Kpn2I TCCGGA 1 cut(s) 1250
Kzo9I GATC 6 cut(s) 94, 144, 480, 876, 977, 1270
LguI GCTCTTC 1 cut(s) 296
LmnI GCTCC 7 cut(s) 50, 166, 253, 1099, 1185, 1505, 1525
Lsp1109I GCAGC 5 cut(s) 114, 176, 371, 409, 1355
LweI GCATC 3 cut(s) 1016, 1087, 1626
MabI ACCWGGT 1 cut(s) 649
MaeI CTAG 4 cut(s) 276, 675, 714, 1104
MaeII ACGT 1 cut(s) 847
MaeIII GTNAC 3 cut(s) 839, 1214, 1325
MalI GATC 6 cut(s) 96, 146, 482, 878, 979, 1272
MboI GATC 6 cut(s) 94, 144, 480, 876, 977, 1270
MboII GAAGA 8 cut(s) 161, 313, 682, 935, 1415, 1538, 1619, 1676
MflI RGATCY 1 cut(s) 977
MhlI GDGCHC 3 cut(s) 171, 308, 1182
MluCI AATT 8 cut(s) 69, 137, 320, 324, 457, 1334, 1384, 1595
MlyI GAGTC 5 cut(s) 146, 1222, 1363, 1577, 1684
MmeI TCCRAC 1 cut(s) 1260
MroI TCCGGA 1 cut(s) 1250
MroXI GAANNNNTTC 1 cut(s) 324
MspA1I CMGCKG 2 cut(s) 362, 1061
MspCI CTTAAG 1 cut(s) 859
MspI CCGG 5 cut(s) 90, 131, 962, 1251, 1565
MvaI CCWGG 9 cut(s) 66, 651, 998, 1141, 1176, 1289, 1378, 1491, 1548
MwoI GCNNNNNNNGC 8 cut(s) 42, 99, 245, 422, 431, 585, 626, 718
NciI CCSGG 1 cut(s) 1566
NdeII GATC 6 cut(s) 94, 144, 480, 876, 977, 1270
NlaIII CATG 4 cut(s) 215, 619, 1361, 1375
NlaIV GGNNCC 8 cut(s) 175, 351, 979, 1146, 1181, 1413, 1521, 1563
NmuCI GTSAC 3 cut(s) 839, 1214, 1325
NsbI TGCGCA 1 cut(s) 1311
PaeR7I CTCGAG 1 cut(s) 1298
PagI TCATGA 2 cut(s) 211, 1357
PceI AGGCCT 2 cut(s) 579, 945
PciSI GCTCTTC 1 cut(s) 296
PdmI GAANNNNTTC 1 cut(s) 324
PfeI GAWTC 4 cut(s) 887, 935, 1055, 1136
PfoI TCCNGGA 3 cut(s) 64, 996, 1546
PkrI GCNGC 6 cut(s) 129, 191, 361, 424, 909, 1345
PleI GAGTC 5 cut(s) 146, 1221, 1362, 1577, 1683
PpsI GAGTC 5 cut(s) 146, 1221, 1362, 1577, 1683
PpuMI RGGWCCY 2 cut(s) 350, 1411
PshAI GACNNNNGTC 1 cut(s) 846
PshBI ATTAAT 1 cut(s) 323
Psp5II RGGWCCY 2 cut(s) 350, 1411
Psp6I CCWGG 9 cut(s) 64, 649, 996, 1139, 1174, 1287, 1376, 1489, 1546
PspFI CCCAGC 2 cut(s) 244, 489
PspGI CCWGG 9 cut(s) 64, 649, 996, 1139, 1174, 1287, 1376, 1489, 1546
PspN4I GGNNCC 8 cut(s) 175, 351, 979, 1146, 1181, 1413, 1521, 1563
PspPI GGNCC 7 cut(s) 173, 350, 619, 647, 1083, 1145, 1411
PspPPI RGGWCCY 2 cut(s) 350, 1411
PsrI GAACNNNNNNTAC 2 cut(s) 549, 581
PstI CTGCAG 2 cut(s) 361, 1345
PstNI CAGNNNCTG 1 cut(s) 1318
PsuI RGATCY 1 cut(s) 977
PvuII CAGCTG 1 cut(s) 1061
RsaI GTAC 5 cut(s) 372, 497, 509, 655, 1316
RsaNI GTAC 5 cut(s) 371, 496, 508, 654, 1315
SalI GTCGAC 1 cut(s) 864
SapI GCTCTTC 1 cut(s) 296
SatI GCNGC 6 cut(s) 128, 190, 360, 423, 908, 1344
Sau3AI GATC 6 cut(s) 94, 144, 480, 876, 977, 1270
Sau96I GGNCC 7 cut(s) 173, 350, 619, 647, 1083, 1145, 1411
SchI GAGTC 5 cut(s) 146, 1222, 1363, 1577, 1684
SduI GDGCHC 3 cut(s) 171, 308, 1182
SexAI ACCWGGT 1 cut(s) 649
SfaNI GCATC 3 cut(s) 1016, 1087, 1626
SfcI CTRYAG 2 cut(s) 357, 1341
Sfr274I CTCGAG 1 cut(s) 1298
SinI GGWCC 4 cut(s) 350, 647, 1083, 1411
SlaI CTCGAG 1 cut(s) 1298
SmlI CTYRAG 3 cut(s) 581, 859, 1298
SmoI CTYRAG 3 cut(s) 581, 859, 1298
Sse9I AATT 8 cut(s) 69, 137, 320, 324, 457, 1334, 1384, 1595
SseBI AGGCCT 2 cut(s) 579, 945
SsiI CCGC 4 cut(s) 100, 362, 425, 907
SspMI CTAG 4 cut(s) 276, 675, 714, 1104
StuI AGGCCT 2 cut(s) 579, 945
StyI CCWWGG 3 cut(s) 156, 928, 946
TaaI ACNGT 4 cut(s) 635, 807, 1229, 1278
TaiI ACGT 1 cut(s) 850
TaqI TCGA 5 cut(s) 147, 865, 1196, 1299, 1574
TaqII GACCGA 1 cut(s) 1071
TasI AATT 8 cut(s) 69, 137, 320, 324, 457, 1334, 1384, 1595
TatI WGTACW 1 cut(s) 495
TauI GCSGC 1 cut(s) 910
TfiI GAWTC 4 cut(s) 887, 935, 1055, 1136
TscAI CASTG 2 cut(s) 608, 842
TseFI GTSAC 3 cut(s) 839, 1214, 1325
TseI GCWGC 5 cut(s) 127, 189, 359, 422, 1343
Tsp45I GTSAC 3 cut(s) 839, 1214, 1325
TspDTI ATGAA 4 cut(s) 98, 200, 347, 1550
TspRI CASTG 2 cut(s) 608, 842
Vha464I CTTAAG 1 cut(s) 859
VpaK11BI GGWCC 4 cut(s) 350, 647, 1083, 1411
VspI ATTAAT 1 cut(s) 323
XagI CCTNNNNNAGG 1 cut(s) 1107
XapI RAATTY 2 cut(s) 69, 457
XcmI CCANNNNNNNNNTGG 2 cut(s) 965, 1490
XhoI CTCGAG 1 cut(s) 1298
XmiI GTMKAC 1 cut(s) 865
XmnI GAANNNNTTC 1 cut(s) 324
XspI CTAG 4 cut(s) 276, 675, 714, 1104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.