Rmu_sc0005176.1_g000001

Glycine-rich RNA-binding protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005176.1
Physical Location & Seq
Reverse (-)
1 .. 2057
2057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005176.1_g000001.1.cds

Sequence Viewer

Length: 179 bp
atggacaggatagcaaataggccgagaggatttgctttcctccgctatgaaaccgaggaggaatctcaaaaggctatcgagggaatgcatggaaagtttttggatggcagagtaatatttgttgaagaagcaaagcccagatcagagctacgacaaaccctcaaacaaaacccaagaca

Protein Analysis

59

Amino Acids

6.98

Weight (kDa)

9.39

Isoelectric Point (pI)

65.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 43
AgsI TTSAA 1 cut(s) 125
AluBI AGCT 1 cut(s) 148
AluI AGCT 1 cut(s) 148
AoxI GGCC 1 cut(s) 20
BccI CCATC 1 cut(s) 98
BsaJI CCNNGG 1 cut(s) 54
BseDI CCNNGG 1 cut(s) 54
BseGI GGATG 1 cut(s) 109
BseRI GAGGAG 1 cut(s) 71
BshFI GGCC 1 cut(s) 22
BsmI GAATGC 1 cut(s) 90
BsnI GGCC 1 cut(s) 22
Bsp143I GATC 1 cut(s) 140
BspACI CCGC 1 cut(s) 43
BspANI GGCC 1 cut(s) 22
BssECI CCNNGG 1 cut(s) 54
BssMI GATC 1 cut(s) 140
BstF5I GGATG 1 cut(s) 109
BstKTI GATC 1 cut(s) 143
BstMBI GATC 1 cut(s) 140
BsuRI GGCC 1 cut(s) 22
BtsCI GGATG 1 cut(s) 109
CviAII CATG 1 cut(s) 89
CviJI RGCY 4 cut(s) 22, 74, 136, 148
CviKI_1 RGCY 4 cut(s) 22, 74, 136, 148
DpnI GATC 1 cut(s) 142
DpnII GATC 1 cut(s) 140
EcoT22I ATGCAT 1 cut(s) 90
FaeI CATG 1 cut(s) 92
FaiI YATR 2 cut(s) 48, 90
FatI CATG 1 cut(s) 88
FokI GGATG 1 cut(s) 116
HaeIII GGCC 1 cut(s) 22
Hin1II CATG 1 cut(s) 92
HinfI GANTC 1 cut(s) 62
Hpy188I TCNGA 1 cut(s) 145
HpyCH4V TGCA 1 cut(s) 88
Hsp92II CATG 1 cut(s) 92
Kzo9I GATC 1 cut(s) 140
LpnPI CCDG 1 cut(s) 151
MalI GATC 1 cut(s) 142
MboI GATC 1 cut(s) 140
MboII GAAGA 1 cut(s) 137
MnlI CCTC 6 cut(s) 20, 49, 50, 52, 73, 170
Mph1103I ATGCAT 1 cut(s) 90
Mva1269I GAATGC 1 cut(s) 90
NdeII GATC 1 cut(s) 140
NlaIII CATG 1 cut(s) 92
NmeAIII GCCGAG 1 cut(s) 48
NsiI ATGCAT 1 cut(s) 90
PctI GAATGC 1 cut(s) 90
PfeI GAWTC 1 cut(s) 62
Sau3AI GATC 1 cut(s) 140
SetI ASST 1 cut(s) 150
SgeI CNNG 6 cut(s) 19, 36, 67, 91, 101, 150
SsiI CCGC 1 cut(s) 43
SspI AATATT 1 cut(s) 117
TaqI TCGA 1 cut(s) 78
TfiI GAWTC 1 cut(s) 62
TspDTI ATGAA 1 cut(s) 63
Zsp2I ATGCAT 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.