Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005416.1

Orthogroup ID

OG0005078

Physical Location & Seq

Genomic Coordinates Forward (+)

12501 .. 15016

Gene Structure 2516 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1074 bp

atggcttccacacttggcgcctcatcgctctccgccaagctccagaagccatctctcctcgactcctccttccacggcgctcccgtcgcccgcgtccagccactcaaggccgcctcatccaacggccacggcctctccgtctccatgtccgccggcgcctccaccaactcctatgatctcagcaacttcaagttcgagccgatcaaggagtccatcgtctccagggagatgaccaggcgctacatgactgacatgatcacctacgccgataccgacgtcgtcgtcgtcggtgctggctccgccggactctcctgcgcctacgagctcagcaagaaccccgatgtgcaggttgctattattgagcagtccgtcagccccggcggcggcgcgtggctcggtggccagcttttctccgccatggttgtgaggaaaccagcacatcacttccttaacgagttgggcattgcctacgacgaggcggatgactatgtagtcatcaagcatgctgctctattcacctcaactattatgagcaagctccttgctcggcccaatgtgaaactcttcaacgccgtagcagctgaggatttgatcatcaagggtgggagagttggtggtgttgtcaccaactgggccttggtctccatgaaccatgacacacagtcgtgcatggaccccaacgttatggaagccaaggtggtggttagctcatgtggtcatgatggcccaatgggagccaccggcgtgaagaggttgaggagcgttgggatgattgacagcgtgcctgggatgaaggccttggacatgaatgcagctgaagatgccattgtgaagctaaccagggaaatagtgcctggaatgattgttactggcatggaagttgctgagattgatggatctccaagaatgggacctacatttggagctatgatgatctcagggcaaaaggcagcccacttggcattgaaggcgctaggacttcccaacgttcttgatggatcatatgttggaggcatccacccagagctgatcttagctgctgcagaatctgcttctgagatcgcagatgcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006725 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008270 GO:0009058 GO:0009110 GO:0009228 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009941 GO:0009987 GO:0010319 GO:0017144 GO:0018130 GO:0018131 GO:0019438 GO:0019904 GO:0031967 GO:0031975 GO:0033554 GO:0034641 GO:0042364 GO:0042723 GO:0042724 GO:0042802 GO:0042803 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046484 GO:0046872 GO:0046914 GO:0046983 GO:0050896 GO:0051716 GO:0052837 GO:0052838 GO:0071704 GO:0072527 GO:0072528 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00730 ko01100 map00730 map01100

Pfam Domains

Protein Families

Thi4

Protein Analysis

357

Amino Acids

37.25

Weight (kDa)

5.72

Isoelectric Point (pI)

33.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thi4	PF01946	74 - 307	2.8e-113	Thi4 family
FAD_binding_2	PF00890	92 - 128	1e-06	FAD binding domain
DAO	PF01266	92 - 139	2.9e-08	FAD dependent oxidoreductase
Pyr_redox_2	PF07992	92 - 133	7.8e-06	Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_8	PF13450	95 - 130	6.4e-07	NAD(P)-binding Rossmann-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54770
fragaria_vesca	FvH4_3g21940 FvH4_3g33490
malus_domestica	MD03G1210100.v1.1 MD11G1224800.v1.1
prunus_persica	Prupe.4G205100_v2.0.a1
pyrus_communis	pycom03g15900
rosa_chinensis	RchiOBHm_Chr5g0037761 RchiOBHm_Chr5g0060861 RchiOBHm_Chr5g0060911
rosa_laevigata	RLG00000033809 RLG00000035410
rosa_multiflora	Rmu_sc0000420.1_g000030 Rmu_sc0005416.1_g000004 Rmu_sc0006558.1_g000042 Rmu_sc0026922.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019770 Rroxscaffold_1G00043140
rosa_rugosa	Rorug05G0167100 Rorug05G0334800
rosa_samantha	Rh5AG256400 Rh5AG397800 Rh5BG258700 Rh5BG410200 Rh5CG291800 Rh5CG435200 Rh5DG268400 Rh5DG425000
rosa_wichuraiana	Rw5G023770 Rw5G037510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	281, 491
AatII	GACGTC	1 cut(s)	279
Acc36I	ACCTGC	1 cut(s)	337
AccB1I	GGYRCC	2 cut(s)	17, 155
AccII	CGCG	2 cut(s)	93, 389
AciI	CCGC	9 cut(s)	33, 91, 111, 150, 300, 381, 384, 414, 479
AclI	AACGTT	2 cut(s)	681, 987
AclWI	GGATC	2 cut(s)	904, 1006
AcoI	YGGCCR	2 cut(s)	124, 400
AcuI	CTGAAG	1 cut(s)	837
AcyI	GRCGYC	3 cut(s)	18, 156, 276
AfiI	CCNNNNNNNGG	3 cut(s)	383, 908, 920
AgsI	TTSAA	3 cut(s)	190, 568, 967
AhdI	GACNNNNNGTC	1 cut(s)	661
AjnI	CCWGG	5 cut(s)	221, 233, 784, 839, 853
AleI	CACNNNNGTG	2 cut(s)	664, 743
Alw21I	GWGCWC	1 cut(s)	327
Alw26I	GTCTC	3 cut(s)	145, 223, 646
AlwI	GGATC	2 cut(s)	904, 1006
AlwNI	CAGNNNCTG	1 cut(s)	1049
AoxI	GGCC	8 cut(s)	108, 124, 130, 400, 548, 633, 724, 795
ApeKI	GCWGC	6 cut(s)	506, 578, 812, 950, 1037, 1040
Asp700I	GAANNNNTTC	1 cut(s)	563
AspLEI	GCGC	7 cut(s)	20, 80, 158, 240, 317, 389, 973
AspS9I	GGNCC	5 cut(s)	549, 633, 673, 725, 911
AsuC2I	CCSGG	1 cut(s)	378
AsuHPI	GGTGA	3 cut(s)	250, 508, 616
AvaII	GGWCC	2 cut(s)	673, 911
BaeI	ACNNNNGTAYC	2 cut(s)	261, 294
BalI	TGGCCA	1 cut(s)	402
BanI	GGYRCC	2 cut(s)	17, 155
BanII	GRGCYC	1 cut(s)	327
Bbv12I	GWGCWC	1 cut(s)	327
BbvCI	CCTCAGC	1 cut(s)	582
BbvI	GCAGC	6 cut(s)	493, 590, 824, 962, 1024, 1027
BccI	CCATC	5 cut(s)	58, 221, 716, 887, 989
BceAI	ACGGC	4 cut(s)	91, 139, 145, 557
BciT130I	CCWGG	5 cut(s)	223, 235, 786, 841, 855
BclI	TGATCA	2 cut(s)	255, 591
BcnI	CCSGG	1 cut(s)	378
BcoDI	GTCTC	3 cut(s)	145, 223, 646
BfaI	CTAG	1 cut(s)	974
BfmI	CTRYAG	1 cut(s)	1041
BfoI	RGCGCY	5 cut(s)	21, 81, 159, 241, 974
BfuAI	ACCTGC	1 cut(s)	337
BglI	GCCNNNNNGGC	2 cut(s)	381, 959
BisI	GCNGC	9 cut(s)	111, 382, 385, 507, 579, 813, 951, 1038, 1041
BlpI	GCTNAGC	1 cut(s)	326
BlsI	GCNGC	9 cut(s)	112, 383, 386, 508, 580, 814, 952, 1039, 1042
Bme1390I	CCNGG	6 cut(s)	223, 235, 378, 786, 841, 855
Bme18I	GGWCC	2 cut(s)	673, 911
BmeRI	GACNNNNNGTC	1 cut(s)	661
BmgT120I	GGNCC	5 cut(s)	549, 633, 673, 725, 911
BmiI	GGNNCC	6 cut(s)	19, 157, 298, 675, 736, 912
BmrFI	CCNGG	6 cut(s)	223, 235, 378, 786, 841, 855
BmrI	ACTGGG	1 cut(s)	640
BmsI	GCATC	3 cut(s)	811, 1023, 1057
BmuI	ACTGGG	1 cut(s)	640
BpmI	CTGGAG	2 cut(s)	26, 205
Bpu10I	CCTNAGC	1 cut(s)	582
Bpu1102I	GCTNAGC	1 cut(s)	326
BpuEI	CTTGAG	1 cut(s)	89
BpuMI	CCSGG	1 cut(s)	378
BsaHI	GRCGYC	3 cut(s)	18, 156, 276
BsaI	GGTCTC	1 cut(s)	646
BsaXI	ACNNNNNCTCC	4 cut(s)	119, 149, 598, 628
Bsc4I	CCNNNNNNNGG	3 cut(s)	383, 908, 920
Bse118I	RCCGGY	2 cut(s)	152, 740
Bse1I	ACTGG	2 cut(s)	635, 874
Bse3DI	GCAATG	1 cut(s)	462
BseBI	CCWGG	5 cut(s)	223, 235, 786, 841, 855
BseGI	GGATG	5 cut(s)	116, 487, 774, 795, 1014
BseLI	CCNNNNNNNGG	3 cut(s)	383, 908, 920
BseMI	GCAATG	1 cut(s)	462
BseMII	CTCAG	6 cut(s)	193, 340, 573, 876, 951, 1047
BseNI	ACTGG	2 cut(s)	635, 874
BseRI	GAGGAG	3 cut(s)	47, 55, 772
BseXI	GCAGC	6 cut(s)	493, 590, 824, 962, 1024, 1027
BsgI	GTGCAG	1 cut(s)	365
Bsh1236I	CGCG	2 cut(s)	93, 389
BshFI	GGCC	8 cut(s)	110, 126, 132, 402, 550, 635, 726, 797
BshNI	GGYRCC	2 cut(s)	17, 155
BsiHKAI	GWGCWC	1 cut(s)	327
BsiSI	CCGG	4 cut(s)	153, 303, 378, 741
BslFI	GGGAC	1 cut(s)	924
BslI	CCNNNNNNNGG	3 cut(s)	383, 908, 920
BsmAI	GTCTC	3 cut(s)	145, 223, 646
BsmBI	CGTCTC	2 cut(s)	145, 223
BsmFI	GGGAC	1 cut(s)	924
BsmI	GAATGC	1 cut(s)	814
BsnI	GGCC	8 cut(s)	110, 126, 132, 402, 550, 635, 726, 797
Bso31I	GGTCTC	1 cut(s)	646
Bsp1286I	GDGCHC	1 cut(s)	327
Bsp143I	GATC	9 cut(s)	175, 201, 255, 591, 896, 933, 998, 1029, 1059
Bsp1720I	GCTNAGC	1 cut(s)	326
Bsp19I	CCATGG	1 cut(s)	417
BspACI	CCGC	9 cut(s)	33, 91, 111, 150, 300, 381, 384, 414, 479
BspANI	GGCC	8 cut(s)	110, 126, 132, 402, 550, 635, 726, 797
BspCNI	CTCAG	6 cut(s)	192, 339, 574, 877, 950, 1048
BspFNI	CGCG	2 cut(s)	93, 389
BspHI	TCATGA	1 cut(s)	718
BspLI	GGNNCC	6 cut(s)	19, 157, 298, 675, 736, 912
BspMAI	CTGCAG	1 cut(s)	1045
BspMI	ACCTGC	1 cut(s)	337
BspPI	GGATC	2 cut(s)	904, 1006
BspT107I	GGYRCC	2 cut(s)	17, 155
BspTNI	GGTCTC	1 cut(s)	646
BsrDI	GCAATG	1 cut(s)	462
BsrFI	RCCGGY	2 cut(s)	152, 740
BsrI	ACTGG	2 cut(s)	635, 874
BssAI	RCCGGY	2 cut(s)	152, 740
BssMI	GATC	9 cut(s)	175, 201, 255, 591, 896, 933, 998, 1029, 1059
BssNI	GRCGYC	3 cut(s)	18, 156, 276
BssT1I	CCWWGG	4 cut(s)	417, 636, 693, 798
Bst2UI	CCWGG	5 cut(s)	223, 235, 786, 841, 855
Bst4CI	ACNGT	1 cut(s)	663
Bst6I	CTCTTC	2 cut(s)	569, 743
BstACI	GRCGYC	3 cut(s)	18, 156, 276
BstAPI	GCANNNNNTGC	1 cut(s)	1049
BstC8I	GCNNGC	7 cut(s)	91, 154, 295, 404, 504, 536, 782
BstDEI	CTNAG	7 cut(s)	179, 326, 582, 885, 937, 1033, 1056
BstDSI	CCRYGG	3 cut(s)	73, 127, 417
BstF5I	GGATG	5 cut(s)	116, 487, 774, 795, 1014
BstFNI	CGCG	2 cut(s)	93, 389
BstH2I	RGCGCY	5 cut(s)	21, 81, 159, 241, 974
BstHHI	GCGC	7 cut(s)	20, 80, 158, 240, 317, 389, 973
BstKTI	GATC	9 cut(s)	178, 204, 258, 594, 899, 936, 1001, 1032, 1062
BstMAI	GTCTC	3 cut(s)	145, 223, 646
BstMBI	GATC	9 cut(s)	175, 201, 255, 591, 896, 933, 998, 1029, 1059
BstMWI	GCNNNNNNNGC	9 cut(s)	46, 86, 299, 381, 578, 821, 959, 968, 1049
BstNI	CCWGG	5 cut(s)	223, 235, 786, 841, 855
BstNSI	RCATGY	1 cut(s)	506
BstSCI	CCNGG	6 cut(s)	221, 233, 376, 784, 839, 853
BstSFI	CTRYAG	1 cut(s)	1041
BstUI	CGCG	2 cut(s)	93, 389
BstV1I	GCAGC	6 cut(s)	493, 590, 824, 962, 1024, 1027
BstX2I	RGATCY	1 cut(s)	896
BstXI	CCANNNNNNTGG	2 cut(s)	685, 700
BstYI	RGATCY	1 cut(s)	896
BsuRI	GGCC	8 cut(s)	110, 126, 132, 402, 550, 635, 726, 797
BtgI	CCRYGG	3 cut(s)	73, 127, 417
BtgZI	GCGATG	1 cut(s)	9
BtsCI	GGATG	5 cut(s)	116, 487, 774, 795, 1014
BveI	ACCTGC	1 cut(s)	337
Cac8I	GCNNGC	7 cut(s)	91, 154, 295, 404, 504, 536, 782
CaiI	CAGNNNCTG	1 cut(s)	1049
CciI	TCATGA	1 cut(s)	718
CfoI	GCGC	7 cut(s)	20, 80, 158, 240, 317, 389, 973
Cfr10I	RCCGGY	2 cut(s)	152, 740
Cfr13I	GGNCC	5 cut(s)	549, 633, 673, 725, 911
CseI	GACGC	1 cut(s)	82
DdeI	CTNAG	7 cut(s)	179, 326, 582, 885, 937, 1033, 1056
DinI	GGCGCC	2 cut(s)	19, 157
DpnI	GATC	9 cut(s)	177, 203, 257, 593, 898, 935, 1000, 1031, 1061
DpnII	GATC	9 cut(s)	175, 201, 255, 591, 896, 933, 998, 1029, 1059
DrdI	GACNNNNNNGTC	2 cut(s)	281, 491
DriI	GACNNNNNGTC	1 cut(s)	661
DseDI	GACNNNNNNGTC	2 cut(s)	281, 491
EaeI	YGGCCR	2 cut(s)	124, 400
Eam1104I	CTCTTC	2 cut(s)	569, 743
Eam1105I	GACNNNNNGTC	1 cut(s)	661
EarI	CTCTTC	2 cut(s)	569, 743
EciI	GGCGGA	5 cut(s)	22, 139, 289, 403, 494
Ecl136II	GAGCTC	1 cut(s)	325
Eco130I	CCWWGG	4 cut(s)	417, 636, 693, 798
Eco147I	AGGCCT	1 cut(s)	797
Eco24I	GRGCYC	1 cut(s)	327
Eco31I	GGTCTC	1 cut(s)	646
Eco47I	GGWCC	2 cut(s)	673, 911
Eco53kI	GAGCTC	1 cut(s)	325
Eco57I	CTGAAG	1 cut(s)	837
EcoICRI	GAGCTC	1 cut(s)	325
EcoO109I	RGGNCCY	1 cut(s)	911
EcoRII	CCWGG	5 cut(s)	221, 233, 784, 839, 853
EcoT14I	CCWWGG	4 cut(s)	417, 636, 693, 798
EcoT38I	GRGCYC	1 cut(s)	327
EgeI	GGCGCC	2 cut(s)	19, 157
EheI	GGCGCC	2 cut(s)	19, 157
ErhI	CCWWGG	4 cut(s)	417, 636, 693, 798
Esp3I	CGTCTC	2 cut(s)	145, 223
FaqI	GGGAC	1 cut(s)	924
FauI	CCCGC	1 cut(s)	98
FauNDI	CATATG	1 cut(s)	1003
FbaI	TGATCA	2 cut(s)	255, 591
Fnu4HI	GCNGC	9 cut(s)	111, 382, 385, 507, 579, 813, 951, 1038, 1041
FokI	GGATG	5 cut(s)	103, 494, 781, 802, 1001
FriOI	GRGCYC	1 cut(s)	327
Fsp4HI	GCNGC	9 cut(s)	111, 382, 385, 507, 579, 813, 951, 1038, 1041
FspBI	CTAG	1 cut(s)	974
GlaI	GCGC	7 cut(s)	19, 79, 157, 239, 316, 388, 972
GluI	GCNGC	9 cut(s)	111, 382, 385, 507, 579, 813, 951, 1038, 1041
GsuI	CTGGAG	2 cut(s)	26, 205
HaeII	RGCGCY	5 cut(s)	21, 81, 159, 241, 974
HaeIII	GGCC	8 cut(s)	110, 126, 132, 402, 550, 635, 726, 797
HapII	CCGG	4 cut(s)	153, 303, 378, 741
HgaI	GACGC	1 cut(s)	82
HhaI	GCGC	7 cut(s)	20, 80, 158, 240, 317, 389, 973
Hin1I	GRCGYC	3 cut(s)	18, 156, 276
Hin6I	GCGC	7 cut(s)	18, 78, 156, 238, 315, 387, 971
HinP1I	GCGC	7 cut(s)	18, 78, 156, 238, 315, 387, 971
HinfI	GANTC	4 cut(s)	62, 209, 306, 1046
HpaII	CCGG	4 cut(s)	153, 303, 378, 741
HphI	GGTGA	3 cut(s)	250, 508, 616
Hpy188I	TCNGA	1 cut(s)	1057
Hpy188III	TCNNGA	3 cut(s)	43, 719, 992
Hpy99I	CGWCG	7 cut(s)	89, 278, 281, 284, 287, 290, 476
HpyAV	CCTTC	3 cut(s)	79, 787, 961
HpyCH4III	ACNGT	1 cut(s)	663
HpyCH4IV	ACGT	3 cut(s)	276, 681, 987
HpyCH4V	TGCA	4 cut(s)	346, 669, 812, 1043
HpyF10VI	GCNNNNNNNGC	9 cut(s)	46, 86, 299, 381, 578, 821, 959, 968, 1049
HpyF3I	CTNAG	7 cut(s)	179, 326, 582, 885, 937, 1033, 1056
HpySE526I	ACGT	3 cut(s)	276, 681, 987
Hsp92I	GRCGYC	3 cut(s)	18, 156, 276
HspAI	GCGC	7 cut(s)	18, 78, 156, 238, 315, 387, 971
KasI	GGCGCC	2 cut(s)	17, 155
KroI	GCCGGC	1 cut(s)	152
KroNI	GCCGGC	1 cut(s)	154
Ksp22I	TGATCA	2 cut(s)	255, 591
Kzo9I	GATC	9 cut(s)	175, 201, 255, 591, 896, 933, 998, 1029, 1059
LmnI	GCTCC	7 cut(s)	45, 85, 302, 543, 734, 759, 923
Lsp1109I	GCAGC	6 cut(s)	493, 590, 824, 962, 1024, 1027
LweI	GCATC	3 cut(s)	811, 1023, 1057
MaeI	CTAG	1 cut(s)	974
MaeII	ACGT	3 cut(s)	276, 681, 987
MaeIII	GTNAC	2 cut(s)	622, 865
MalI	GATC	9 cut(s)	177, 203, 257, 593, 898, 935, 1000, 1031, 1061
MboI	GATC	9 cut(s)	175, 201, 255, 591, 896, 933, 998, 1029, 1059
MboII	GAAGA	3 cut(s)	556, 760, 830
MflI	RGATCY	1 cut(s)	896
MhlI	GDGCHC	1 cut(s)	327
MlsI	TGGCCA	1 cut(s)	402
MluNI	TGGCCA	1 cut(s)	402
Mly113I	GGCGCC	2 cut(s)	18, 156
MlyI	GAGTC	3 cut(s)	56, 218, 300
MmeI	TCCRAC	2 cut(s)	144, 988
Mox20I	TGGCCA	1 cut(s)	402
MreI	CGCCGGCG	1 cut(s)	152
MroNI	GCCGGC	1 cut(s)	152
MroXI	GAANNNNTTC	1 cut(s)	563
MscI	TGGCCA	1 cut(s)	402
MseI	TTAA	2 cut(s)	450, 1072
MslI	CAYNNNNRTG	3 cut(s)	422, 664, 743
Msp20I	TGGCCA	1 cut(s)	402
MspA1I	CMGCKG	2 cut(s)	581, 815
MspI	CCGG	4 cut(s)	153, 303, 378, 741
MspR9I	CCNGG	6 cut(s)	223, 235, 378, 786, 841, 855
Mva1269I	GAATGC	1 cut(s)	814
MvaI	CCWGG	5 cut(s)	223, 235, 786, 841, 855
MvnI	CGCG	2 cut(s)	93, 389
MwoI	GCNNNNNNNGC	9 cut(s)	46, 86, 299, 381, 578, 821, 959, 968, 1049
NaeI	GCCGGC	1 cut(s)	154
NarI	GGCGCC	2 cut(s)	18, 156
NciI	CCSGG	1 cut(s)	378
NcoI	CCATGG	1 cut(s)	417
NdeI	CATATG	1 cut(s)	1003
NdeII	GATC	9 cut(s)	175, 201, 255, 591, 896, 933, 998, 1029, 1059
NgoMIV	GCCGGC	1 cut(s)	152
NlaIV	GGNNCC	6 cut(s)	19, 157, 298, 675, 736, 912
NmeAIII	GCCGAG	1 cut(s)	526
NmuCI	GTSAC	1 cut(s)	622
NspI	RCATGY	1 cut(s)	506
OliI	CACNNNNGTG	2 cut(s)	664, 743
PaeI	GCATGC	1 cut(s)	506
PagI	TCATGA	1 cut(s)	718
PceI	AGGCCT	1 cut(s)	797
PcsI	WCGNNNNNNNCGW	4 cut(s)	81, 135, 270, 282
PctI	GAATGC	1 cut(s)	814
PdiI	GCCGGC	1 cut(s)	154
PdmI	GAANNNNTTC	1 cut(s)	563
PfeI	GAWTC	1 cut(s)	1046
PflFI	GACNNNGTC	1 cut(s)	278
PkrI	GCNGC	9 cut(s)	112, 383, 386, 508, 580, 814, 952, 1039, 1042
PleI	GAGTC	3 cut(s)	56, 217, 300
PluTI	GGCGCC	2 cut(s)	21, 159
PpsI	GAGTC	3 cut(s)	56, 217, 300
PpuMI	RGGWCCY	1 cut(s)	911
Psp124BI	GAGCTC	1 cut(s)	327
Psp1406I	AACGTT	2 cut(s)	681, 987
Psp5II	RGGWCCY	1 cut(s)	911
Psp6I	CCWGG	5 cut(s)	221, 233, 784, 839, 853
PspGI	CCWGG	5 cut(s)	221, 233, 784, 839, 853
PspN4I	GGNNCC	6 cut(s)	19, 157, 298, 675, 736, 912
PspPI	GGNCC	5 cut(s)	549, 633, 673, 725, 911
PspPPI	RGGWCCY	1 cut(s)	911
PstI	CTGCAG	1 cut(s)	1045
PstNI	CAGNNNCTG	1 cut(s)	1049
PsuI	RGATCY	1 cut(s)	896
PsyI	GACNNNGTC	1 cut(s)	278
PvuII	CAGCTG	2 cut(s)	581, 815
RseI	CAYNNNNRTG	3 cut(s)	422, 664, 743
SacI	GAGCTC	1 cut(s)	327
SaqAI	TTAA	2 cut(s)	450, 1072
SatI	GCNGC	9 cut(s)	111, 382, 385, 507, 579, 813, 951, 1038, 1041
Sau3AI	GATC	9 cut(s)	175, 201, 255, 591, 896, 933, 998, 1029, 1059
Sau96I	GGNCC	5 cut(s)	549, 633, 673, 725, 911
SchI	GAGTC	3 cut(s)	56, 218, 300
ScrFI	CCNGG	6 cut(s)	223, 235, 378, 786, 841, 855
SduI	GDGCHC	1 cut(s)	327
SfaNI	GCATC	3 cut(s)	811, 1023, 1057
SfcI	CTRYAG	1 cut(s)	1041
SfoI	GGCGCC	2 cut(s)	19, 157
SgrAI	CRCCGGYG	2 cut(s)	152, 740
SinI	GGWCC	2 cut(s)	673, 911
SmiMI	CAYNNNNRTG	3 cut(s)	422, 664, 743
SmlI	CTYRAG	1 cut(s)	104
SmoI	CTYRAG	1 cut(s)	104
SphI	GCATGC	1 cut(s)	506
SseBI	AGGCCT	1 cut(s)	797
SsiI	CCGC	9 cut(s)	33, 91, 111, 150, 300, 381, 384, 414, 479
SspDI	GGCGCC	2 cut(s)	17, 155
SspMI	CTAG	1 cut(s)	974
SstI	GAGCTC	1 cut(s)	327
StuI	AGGCCT	1 cut(s)	797
StyD4I	CCNGG	6 cut(s)	221, 233, 376, 784, 839, 853
StyI	CCWWGG	4 cut(s)	417, 636, 693, 798
TaaI	ACNGT	1 cut(s)	663
TaiI	ACGT	3 cut(s)	279, 684, 990
TaqI	TCGA	2 cut(s)	60, 195
TauI	GCSGC	3 cut(s)	113, 384, 387
TfiI	GAWTC	1 cut(s)	1046
Tru1I	TTAA	2 cut(s)	450, 1072
Tru9I	TTAA	2 cut(s)	450, 1072
TseFI	GTSAC	1 cut(s)	622
TseI	GCWGC	6 cut(s)	506, 578, 812, 950, 1037, 1040
Tsp45I	GTSAC	1 cut(s)	622
TspDTI	ATGAA	3 cut(s)	662, 806, 821
TspGWI	ACGGA	2 cut(s)	127, 358
Tth111I	GACNNNGTC	1 cut(s)	278
VpaK11BI	GGWCC	2 cut(s)	673, 911
XceI	RCATGY	1 cut(s)	506
XcmI	CCANNNNNNNNNTGG	1 cut(s)	634
XmnI	GAANNNNTTC	1 cut(s)	563
XspI	CTAG	1 cut(s)	974
ZraI	GACGTC	1 cut(s)	277

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.