Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005424.1

Orthogroup ID

OG0006750

Physical Location & Seq

Genomic Coordinates Reverse (-)

52841 .. 61014

Gene Structure 8174 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2736 bp

atgagcacatcatctagtcggcggcatgaaaagaaagtgcatggccacgacgaagaaagtgccgctaggacaaggccttacggctatgaagagattatgcttaggaggaaggataagaagttgtgtgatagtgttgtggcggaagcggttgatttaggggatgtaccgggggaaggttgtaccgaaaatgtttcagaggcttttgaatccaaaaggggtgagagacggcataaagatttggcccctgttgttgaaaagcctttgtcggaggagagagtgaaggaaagctccagaaagaaagaaacgtatagttctaagagtactaaaacggaagacgatgttgttaaagggaaagttagaagaagcaatgagtcggagagcttgaaggataagccgaaaaaagatacaagaagtgaagctagaggagacaaaactgacaaacaagtacatggtaggaggaaaattgacaaggactcgattgatgagtctgtaaagaagcagtcaagagattattcaacaagaaaagaaagacatttggaccaaagtagaggagaacatgaaagagaaaccaagagaaaataccaacacgaaaatgatgacaaaatcagagacagaagtgctgcaaagaaacatgattcaggaaagcttcgcgctttagaaatttcagagagaaaggagaggacagaatcatcaaaatcacgctttgaagaatcaagacgcaaaaggggaagatcaaggagtagagaccgcgtggatagacataggttaagttctcggtcaccaagggcacacaaacatacattaaataatttggggcctcgcagcgttatatcatcttattctcccaaagataggtctggaagacagcatttggatattgatagtagcagagtgtctactaatggctcaagcagccactatcagcgacatggtgagtctgcgaatagacttggtggctattcccctaggaagagaaggactgaatctgctattaagactccatccccacccgatcgttcacctgaaaagaaaaatgccaggtgggatctcccccatgcatcaactgacaaggcattatctagtttggttgcttctcgttttcagtcatcaaacagtaatgtgtcctcaaatgtacatgggatgaccattgctgttgctgttgcctcaaccgccacaacatctattcctggagtttctcccaattctatattgactaagaagaatgcttccgttgactccgtgcaattaacacaagctacccggcgtatgaggaggcttcatgtagaaaatattccatctacaacctctgaaaacactttggtagaatctcttaataaatttttgttgtcttcgggcgtgaatcatattcaaggaacacaaccctgcatcagttgtgtgattaacaaagagaaggggcaagctcttgtggagtttcttacacctcaagatgctttggctgctctgtcatttgatggcagttcattctttggttctattctcaaaatcaggcgccctaaggactttgttgacgttgctactggtgaccccgagaaatcagtggctgcagctgagagtattgagacaattttcattggtgggatatcgaaggctctttcctcagaaatgcttctggaaatcattagtgtctttggacctttgaaggcataccattttgaggccaatgaggaacttaatggaccatgtgcttttctagagtatgtcgaccagtcagttactctcaaagcttgtgcgggtctgaatggtataaaattaggagggagagtgctaactgtggttcaggcaattcgtagtggatcatccatggtaaatagtggaaatgcatcactctatgagatcccagaacatgcaaagccacttctcaaacaaccttcacatatcctgaagcttagaaatgtgttcaatctggagcacatgtcatcactgtctgaacaagagattgaagaagttctggaagatgtgcgattagaatgtgccaggtttggcatggttaaatctgtaaagattgtcaagcatgcaaacaatcacattgtcaccactagagcgtgtgaagctgtcaatgatgcagaatctggtgggcactggcaaaatttatgttctgaagaaaaagcagcaaaaacagagactttggacgaacatattgataatgacggcaaggaaacgagtggagtgaagcttacaggggcacttaaagaagatgaagtcccagaaagtaattgctttggttatgataaaccagcaggtgattttgtagaggacaagtcatgtcaaatgggccaaccagataaagatattgaaatccaaggaagcaatgacttacctaatagcgaacccgaagaactcaccaacctgccaaacagcatgaaagatgcgtcagagtgttatgatgataaaactcctgaagttacaacagtagagagttctattatagaggaagttgatggtaagaaacaacagacttttgctggaacagatgacaatgtgggaacagaaacagactctattctggagagtggaaccaaggatcagcataatgggaaggataatgattttgatcttggaagcatattcgagcctgggtgtgtctttgtggagtttgggagatcagaagcctcttggatggcagcacattgtttacatggacgagtttttgaggatcggattgtgacagtggagtatatcgcacctgatcattacagggctaaatttttaaactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006810 GO:0006913 GO:0008150 GO:0008152 GO:0008187 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030628 GO:0031974 GO:0031981 GO:0032239 GO:0032241 GO:0032386 GO:0032388 GO:0032879 GO:0032991 GO:0034641 GO:0036002 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0046822 GO:0046824 GO:0046831 GO:0046833 GO:0046907 GO:0048518 GO:0050789 GO:0051049 GO:0051050 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060341 GO:0065007 GO:0070013 GO:0071004 GO:0071010 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

911

Amino Acids

101.35

Weight (kDa)

6.91

Isoelectric Point (pI)

59.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	529 - 596	1.3e-06	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33435
fragaria_vesca	FvH4_4g04160 FvH4_4g04160 FvH4_4g04160
malus_domestica	MD13G1218500.v1.1
prunus_persica	Prupe.1G045200_v2.0.a1 Prupe.1G045200_v2.0.a1
pyrus_communis	pycom13g19340
rosa_chinensis	RchiOBHm_Chr4g0394621 RchiOBHm_Chr4g0394661
rosa_laevigata	RLG00000009679 RLG00000009684
rosa_multiflora	Rmu_sc0005424.1_g000012 Rmu_sc0006945.1_g000040
rosa_roxburghii	Rroxscaffold_5G00339670
rosa_rugosa	Rorug03G0363100.1 Rorug03G0363500.1 Rorug03G0363600.1 Rorug03G0363700.1
rosa_samantha	Rh4AG053300 Rh4AG054000 Rh4BG051200 Rh4BG051700 Rh4CG058500 Rh4DG050200
rosa_wichuraiana	Rw4G004300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2249
Acc36I	ACCTGC	2 cut(s)	2249, 2376
AccB1I	GGYRCC	1 cut(s)	1509
AccI	GTMKAC	2 cut(s)	896, 1722
AccII	CGCG	2 cut(s)	651, 750
AciI	CCGC	7 cut(s)	22, 63, 140, 146, 748, 1170, 1751
AclWI	GGATC	5 cut(s)	1053, 1822, 1849, 2550, 2682
AcoI	YGGCCR	1 cut(s)	43
AcsI	RAATTY	4 cut(s)	660, 1337, 2107, 2723
AcuI	CTGAAG	3 cut(s)	1922, 2139, 2439
AcyI	GRCGYC	1 cut(s)	1510
AfaI	GTAC	5 cut(s)	165, 181, 322, 447, 1134
AfiI	CCNNNNNNNGG	3 cut(s)	173, 852, 1675
AflIII	ACRYGT	1 cut(s)	1932
AjnI	CCWGG	4 cut(s)	1037, 1186, 1994, 2593
Alw21I	GWGCWC	2 cut(s)	8, 1932
Alw26I	GTCTC	6 cut(s)	217, 420, 603, 738, 1574, 2135
AlwI	GGATC	5 cut(s)	1053, 1822, 1849, 2550, 2682
AlwNI	CAGNNNCTG	2 cut(s)	1562, 2090
Ama87I	CYCGRG	1 cut(s)	1547
AoxI	GGCC	6 cut(s)	43, 74, 240, 815, 1677, 2293
ApeKI	GCWGC	8 cut(s)	620, 822, 912, 1457, 1562, 1565, 2129, 2642
ApoI	RAATTY	4 cut(s)	660, 1337, 2107, 2723
Asp700I	GAANNNNTTC	3 cut(s)	1290, 1626, 1965
AspA2I	CCTAGG	1 cut(s)	965
AspLEI	GCGC	2 cut(s)	653, 1512
AspS9I	GGNCC	6 cut(s)	241, 538, 815, 1652, 1697, 2293
AsuC2I	CCSGG	2 cut(s)	168, 1261
AsuHPI	GGTGA	8 cut(s)	230, 771, 944, 1011, 1553, 2044, 2273, 2353
AvaI	CYCGRG	1 cut(s)	1547
AvaII	GGWCC	3 cut(s)	538, 1652, 1697
AvrII	CCTAGG	1 cut(s)	965
AxyI	CCTNAGG	1 cut(s)	1515
BaeGI	GKGCMC	3 cut(s)	790, 2100, 2206
BalI	TGGCCA	1 cut(s)	45
BanI	GGYRCC	1 cut(s)	1509
BbsI	GAAGAC	3 cut(s)	339, 868, 1341
Bbv12I	GWGCWC	2 cut(s)	8, 1932
BbvI	GCAGC	8 cut(s)	607, 834, 924, 1444, 1549, 1577, 2141, 2654
BccI	CCATC	5 cut(s)	1009, 1303, 1466, 2453, 2632
BceAI	ACGGC	3 cut(s)	97, 242, 2185
BcgI	CGANNNNNNTGC	2 cut(s)	41, 75
BciT130I	CCWGG	4 cut(s)	1039, 1188, 1996, 2595
BclI	TGATCA	1 cut(s)	2707
BcnI	CCSGG	2 cut(s)	168, 1261
BcoDI	GTCTC	6 cut(s)	217, 420, 603, 738, 1574, 2135
BfaI	CTAG	7 cut(s)	15, 66, 420, 966, 1080, 1712, 2058
BfmI	CTRYAG	1 cut(s)	1563
BfoI	RGCGCY	1 cut(s)	1513
BfuAI	ACCTGC	2 cut(s)	2249, 2376
BlnI	CCTAGG	1 cut(s)	965
BmcAI	AGTACT	1 cut(s)	322
Bme1390I	CCNGG	6 cut(s)	168, 1039, 1188, 1261, 1996, 2595
Bme18I	GGWCC	3 cut(s)	538, 1652, 1697
BmeT110I	CYCGRG	1 cut(s)	1547
BmgT120I	GGNCC	6 cut(s)	241, 538, 815, 1652, 1697, 2293
BmiI	GGNNCC	4 cut(s)	243, 816, 1511, 2536
BmrFI	CCNGG	6 cut(s)	168, 1039, 1188, 1261, 1996, 2595
BmsI	GCATC	6 cut(s)	1067, 1395, 1438, 1850, 2071, 2377
BpiI	GAAGAC	3 cut(s)	339, 868, 1341
BpmI	CTGGAG	4 cut(s)	274, 1209, 1946, 2546
Bpu10I	CCTNAGC	1 cut(s)	101
BpuEI	CTTGAG	2 cut(s)	892, 1428
BpuMI	CCSGG	2 cut(s)	168, 1261
BsaBI	GATNNNNATC	1 cut(s)	2571
BsaHI	GRCGYC	1 cut(s)	1510
BsaI	GGTCTC	1 cut(s)	738
BsaJI	CCNNGG	7 cut(s)	167, 782, 965, 1821, 2320, 2538, 2594
BsaXI	ACNNNNNCTCC	4 cut(s)	1767, 1797, 1919, 1949
Bsc4I	CCNNNNNNNGG	3 cut(s)	173, 852, 1675
Bse1I	ACTGG	3 cut(s)	1543, 1726, 2105
Bse21I	CCTNAGG	1 cut(s)	1515
Bse3DI	GCAATG	3 cut(s)	373, 1146, 2335
Bse8I	GATNNNNATC	1 cut(s)	2571
BseBI	CCWGG	4 cut(s)	1039, 1188, 1996, 2595
BseDI	CCNNGG	7 cut(s)	167, 782, 965, 1821, 2320, 2538, 2594
BseGI	GGATG	5 cut(s)	166, 1001, 1146, 1817, 2643
BseJI	GATNNNNATC	1 cut(s)	2571
BseLI	CCNNNNNNNGG	3 cut(s)	173, 852, 1675
BseMI	GCAATG	3 cut(s)	373, 1146, 2335
BseMII	CTCAG	2 cut(s)	1560, 1632
BseNI	ACTGG	3 cut(s)	1543, 1726, 2105
BseRI	GAGGAG	4 cut(s)	284, 438, 564, 1285
BseSI	GKGCMC	3 cut(s)	790, 2100, 2206
BseXI	GCAGC	8 cut(s)	607, 834, 924, 1444, 1549, 1577, 2141, 2654
Bsh1236I	CGCG	2 cut(s)	651, 750
Bsh1285I	CGRYCG	1 cut(s)	1015
BshFI	GGCC	6 cut(s)	45, 76, 242, 817, 1679, 2295
BshNI	GGYRCC	1 cut(s)	1509
BsiEI	CGRYCG	1 cut(s)	1015
BsiHKAI	GWGCWC	2 cut(s)	8, 1932
BsiHKCI	CYCGRG	1 cut(s)	1547
BsiSI	CCGG	2 cut(s)	167, 1261
BslFI	GGGAC	1 cut(s)	2207
BslI	CCNNNNNNNGG	3 cut(s)	173, 852, 1675
BsmAI	GTCTC	6 cut(s)	217, 420, 603, 738, 1574, 2135
BsmBI	CGTCTC	1 cut(s)	217
BsmFI	GGGAC	1 cut(s)	2207
BsmI	GAATGC	1 cut(s)	1228
BsnI	GGCC	6 cut(s)	45, 76, 242, 817, 1679, 2295
Bso31I	GGTCTC	1 cut(s)	738
BsoBI	CYCGRG	1 cut(s)	1547
Bsp1286I	GDGCHC	5 cut(s)	8, 790, 1932, 2100, 2206
Bsp1407I	TGTACA	1 cut(s)	1132
Bsp19I	CCATGG	1 cut(s)	1821
BspACI	CCGC	7 cut(s)	22, 63, 140, 146, 748, 1170, 1751
BspANI	GGCC	6 cut(s)	45, 76, 242, 817, 1679, 2295
BspCNI	CTCAG	2 cut(s)	1561, 1631
BspFNI	CGCG	2 cut(s)	651, 750
BspLI	GGNNCC	4 cut(s)	243, 816, 1511, 2536
BspMAI	CTGCAG	1 cut(s)	1567
BspMI	ACCTGC	2 cut(s)	2249, 2376
BspPI	GGATC	5 cut(s)	1053, 1822, 1849, 2550, 2682
BspT107I	GGYRCC	1 cut(s)	1509
BspTNI	GGTCTC	1 cut(s)	738
BsrDI	GCAATG	3 cut(s)	373, 1146, 2335
BsrGI	TGTACA	1 cut(s)	1132
BsrI	ACTGG	3 cut(s)	1543, 1726, 2105
BssECI	CCNNGG	7 cut(s)	167, 782, 965, 1821, 2320, 2538, 2594
BssNI	GRCGYC	1 cut(s)	1510
BssT1I	CCWWGG	5 cut(s)	782, 965, 1821, 2320, 2538
Bst2UI	CCWGG	4 cut(s)	1039, 1188, 1996, 2595
Bst4CI	ACNGT	5 cut(s)	1115, 1792, 1944, 2431, 2689
Bst6I	CTCTTC	2 cut(s)	84, 965
BstACI	GRCGYC	1 cut(s)	1510
BstAUI	TGTACA	1 cut(s)	1132
BstC8I	GCNNGC	2 cut(s)	1419, 2034
BstDEI	CTNAG	7 cut(s)	101, 315, 1215, 1515, 1569, 1618, 1907
BstDSI	CCRYGG	1 cut(s)	1821
BstEII	GGTNACC	2 cut(s)	777, 1541
BstF5I	GGATG	5 cut(s)	166, 1001, 1146, 1817, 2643
BstFNI	CGCG	2 cut(s)	651, 750
BstH2I	RGCGCY	1 cut(s)	1513
BstHHI	GCGC	2 cut(s)	653, 1512
BstMAI	GTCTC	6 cut(s)	217, 420, 603, 738, 1574, 2135
BstMCI	CGRYCG	1 cut(s)	1015
BstMWI	GCNNNNNNNGC	4 cut(s)	912, 1169, 1457, 2069
BstNI	CCWGG	4 cut(s)	1039, 1188, 1996, 2595
BstNSI	RCATGY	3 cut(s)	1868, 1936, 2036
BstPI	GGTNACC	2 cut(s)	777, 1541
BstSCI	CCNGG	6 cut(s)	166, 1037, 1186, 1259, 1994, 2593
BstSFI	CTRYAG	1 cut(s)	1563
BstSLI	GKGCMC	3 cut(s)	790, 2100, 2206
BstUI	CGCG	2 cut(s)	651, 750
BstV1I	GCAGC	8 cut(s)	607, 834, 924, 1444, 1549, 1577, 2141, 2654
BstV2I	GAAGAC	3 cut(s)	339, 868, 1341
BstX2I	RGATCY	2 cut(s)	1045, 1854
BstYI	RGATCY	2 cut(s)	1045, 1854
Bsu36I	CCTNAGG	1 cut(s)	1515
BsuRI	GGCC	6 cut(s)	45, 76, 242, 817, 1679, 2295
BtgI	CCRYGG	1 cut(s)	1821
BtsCI	GGATG	5 cut(s)	166, 1001, 1146, 1817, 2643
BtsIMutI	CAGTG	4 cut(s)	1563, 1940, 2098, 2694
BveI	ACCTGC	2 cut(s)	2249, 2376
Cac8I	GCNNGC	2 cut(s)	1419, 2034
CaiI	CAGNNNCTG	2 cut(s)	1562, 2090
CfoI	GCGC	2 cut(s)	653, 1512
Cfr13I	GGNCC	6 cut(s)	241, 538, 815, 1652, 1697, 2293
CseI	GACGC	2 cut(s)	726, 2379
Csp6I	GTAC	5 cut(s)	164, 180, 321, 446, 1133
CviQI	GTAC	5 cut(s)	164, 180, 321, 446, 1133
DdeI	CTNAG	7 cut(s)	101, 315, 1215, 1515, 1569, 1618, 1907
DinI	GGCGCC	1 cut(s)	1511
DraI	TTTAAA	1 cut(s)	2730
EaeI	YGGCCR	1 cut(s)	43
Eam1104I	CTCTTC	2 cut(s)	84, 965
EarI	CTCTTC	2 cut(s)	84, 965
EciI	GGCGGA	1 cut(s)	155
Eco130I	CCWWGG	5 cut(s)	782, 965, 1821, 2320, 2538
Eco147I	AGGCCT	1 cut(s)	76
Eco31I	GGTCTC	1 cut(s)	738
Eco32I	GATATC	1 cut(s)	1602
Eco47I	GGWCC	3 cut(s)	538, 1652, 1697
Eco57I	CTGAAG	3 cut(s)	1922, 2139, 2439
Eco81I	CCTNAGG	1 cut(s)	1515
Eco88I	CYCGRG	1 cut(s)	1547
Eco91I	GGTNACC	2 cut(s)	777, 1541
EcoO109I	RGGNCCY	1 cut(s)	815
EcoO65I	GGTNACC	2 cut(s)	777, 1541
EcoRII	CCWGG	4 cut(s)	1037, 1186, 1994, 2593
EcoRV	GATATC	1 cut(s)	1602
EcoT14I	CCWWGG	5 cut(s)	782, 965, 1821, 2320, 2538
EcoT22I	ATGCAT	2 cut(s)	1060, 1843
EgeI	GGCGCC	1 cut(s)	1511
EheI	GGCGCC	1 cut(s)	1511
ErhI	CCWWGG	5 cut(s)	782, 965, 1821, 2320, 2538
Esp3I	CGTCTC	1 cut(s)	217
FaqI	GGGAC	1 cut(s)	2207
FauI	CCCGC	1 cut(s)	1744
FbaI	TGATCA	1 cut(s)	2707
FblI	GTMKAC	2 cut(s)	896, 1722
FokI	GGATG	5 cut(s)	173, 988, 1153, 1804, 2650
FspBI	CTAG	7 cut(s)	15, 66, 420, 966, 1080, 1712, 2058
GlaI	GCGC	2 cut(s)	652, 1511
GsuI	CTGGAG	4 cut(s)	274, 1209, 1946, 2546
HaeII	RGCGCY	1 cut(s)	1513
HaeIII	GGCC	6 cut(s)	45, 76, 242, 817, 1679, 2295
HapII	CCGG	2 cut(s)	167, 1261
HgaI	GACGC	2 cut(s)	726, 2379
HhaI	GCGC	2 cut(s)	653, 1512
Hin1I	GRCGYC	1 cut(s)	1510
Hin6I	GCGC	2 cut(s)	651, 1510
HinP1I	GCGC	2 cut(s)	651, 1510
HincII	GTYRAC	3 cut(s)	1234, 1528, 1723
HindII	GTYRAC	3 cut(s)	1234, 1528, 1723
HindIII	AAGCTT	4 cut(s)	644, 1743, 1904, 2192
HpaII	CCGG	2 cut(s)	167, 1261
HphI	GGTGA	8 cut(s)	230, 771, 944, 1011, 1553, 2044, 2273, 2353
Hpy166II	GTNNAC	6 cut(s)	897, 1019, 1234, 1528, 1723, 2654
Hpy8I	GTNNAC	6 cut(s)	897, 1019, 1234, 1528, 1723, 2654
Hpy99I	CGWCG	1 cut(s)	53
HpyCH4III	ACNGT	5 cut(s)	1115, 1792, 1944, 2431, 2689
HpyCH4IV	ACGT	2 cut(s)	305, 1530
HpyF10VI	GCNNNNNNNGC	4 cut(s)	912, 1169, 1457, 2069
HpyF3I	CTNAG	7 cut(s)	101, 315, 1215, 1515, 1569, 1618, 1907
HpySE526I	ACGT	2 cut(s)	305, 1530
Hsp92I	GRCGYC	1 cut(s)	1510
HspAI	GCGC	2 cut(s)	651, 1510
KasI	GGCGCC	1 cut(s)	1509
Ksp22I	TGATCA	1 cut(s)	2707
LmnI	GCTCC	2 cut(s)	293, 1927
Lsp1109I	GCAGC	8 cut(s)	607, 834, 924, 1444, 1549, 1577, 2141, 2654
LweI	GCATC	6 cut(s)	1067, 1395, 1438, 1850, 2071, 2377
MaeI	CTAG	7 cut(s)	15, 66, 420, 966, 1080, 1712, 2058
MaeII	ACGT	2 cut(s)	305, 1530
MaeIII	GTNAC	6 cut(s)	777, 1541, 1732, 2050, 2422, 2683
MflI	RGATCY	2 cut(s)	1045, 1854
MhlI	GDGCHC	5 cut(s)	8, 790, 1932, 2100, 2206
MlsI	TGGCCA	1 cut(s)	45
MluNI	TGGCCA	1 cut(s)	45
Mly113I	GGCGCC	1 cut(s)	1510
MlyI	GAGTC	7 cut(s)	380, 467, 494, 944, 991, 1229, 2510
MmeI	TCCRAC	2 cut(s)	246, 354
Mox20I	TGGCCA	1 cut(s)	45
Mph1103I	ATGCAT	2 cut(s)	1060, 1843
MroXI	GAANNNNTTC	3 cut(s)	1290, 1626, 1965
MscI	TGGCCA	1 cut(s)	45
MslI	CAYNNNNRTG	1 cut(s)	591
Msp20I	TGGCCA	1 cut(s)	45
MspA1I	CMGCKG	1 cut(s)	1568
MspI	CCGG	2 cut(s)	167, 1261
MspR9I	CCNGG	6 cut(s)	168, 1039, 1188, 1261, 1996, 2595
Mva1269I	GAATGC	1 cut(s)	1228
MvaI	CCWGG	4 cut(s)	1039, 1188, 1996, 2595
MvnI	CGCG	2 cut(s)	651, 750
MwoI	GCNNNNNNNGC	4 cut(s)	912, 1169, 1457, 2069
NarI	GGCGCC	1 cut(s)	1510
NciI	CCSGG	2 cut(s)	168, 1261
NcoI	CCATGG	1 cut(s)	1821
NlaIV	GGNNCC	4 cut(s)	243, 816, 1511, 2536
NmuCI	GTSAC	4 cut(s)	777, 1541, 2050, 2683
NsiI	ATGCAT	2 cut(s)	1060, 1843
NspI	RCATGY	3 cut(s)	1868, 1936, 2036
PaeI	GCATGC	1 cut(s)	2036
PaqCI	CACCTGC	1 cut(s)	2249
PceI	AGGCCT	1 cut(s)	76
PciI	ACATGT	1 cut(s)	1932
PctI	GAATGC	1 cut(s)	1228
PdmI	GAANNNNTTC	3 cut(s)	1290, 1626, 1965
PfeI	GAWTC	8 cut(s)	206, 635, 686, 710, 983, 1325, 1360, 2087
PfoI	TCCNGGA	1 cut(s)	1186
Ple19I	CGATCG	1 cut(s)	1015
PleI	GAGTC	7 cut(s)	379, 467, 493, 943, 991, 1229, 2510
PluTI	GGCGCC	1 cut(s)	1513
PpsI	GAGTC	7 cut(s)	379, 467, 493, 943, 991, 1229, 2510
PscI	ACATGT	1 cut(s)	1932
Psp6I	CCWGG	4 cut(s)	1037, 1186, 1994, 2593
PspEI	GGTNACC	2 cut(s)	777, 1541
PspGI	CCWGG	4 cut(s)	1037, 1186, 1994, 2593
PspN4I	GGNNCC	4 cut(s)	243, 816, 1511, 2536
PspPI	GGNCC	6 cut(s)	241, 538, 815, 1652, 1697, 2293
PstI	CTGCAG	1 cut(s)	1567
PstNI	CAGNNNCTG	2 cut(s)	1562, 2090
PsuI	RGATCY	2 cut(s)	1045, 1854
PvuI	CGATCG	1 cut(s)	1015
PvuII	CAGCTG	1 cut(s)	1568
RsaI	GTAC	5 cut(s)	165, 181, 322, 447, 1134
RsaNI	GTAC	5 cut(s)	164, 180, 321, 446, 1133
RseI	CAYNNNNRTG	1 cut(s)	591
SalI	GTCGAC	1 cut(s)	1721
Sau96I	GGNCC	6 cut(s)	241, 538, 815, 1652, 1697, 2293
ScaI	AGTACT	1 cut(s)	322
SchI	GAGTC	7 cut(s)	380, 467, 494, 944, 991, 1229, 2510
ScrFI	CCNGG	6 cut(s)	168, 1039, 1188, 1261, 1996, 2595
SduI	GDGCHC	5 cut(s)	8, 790, 1932, 2100, 2206
SfaNI	GCATC	6 cut(s)	1067, 1395, 1438, 1850, 2071, 2377
SfcI	CTRYAG	1 cut(s)	1563
SfoI	GGCGCC	1 cut(s)	1511
SinI	GGWCC	3 cut(s)	538, 1652, 1697
SmiMI	CAYNNNNRTG	1 cut(s)	591
SmlI	CTYRAG	2 cut(s)	907, 1443
SmoI	CTYRAG	2 cut(s)	907, 1443
SphI	GCATGC	1 cut(s)	2036
SseBI	AGGCCT	1 cut(s)	76
SsiI	CCGC	7 cut(s)	22, 63, 140, 146, 748, 1170, 1751
SspDI	GGCGCC	1 cut(s)	1509
SspI	AATATT	1 cut(s)	1291
SspMI	CTAG	7 cut(s)	15, 66, 420, 966, 1080, 1712, 2058
StuI	AGGCCT	1 cut(s)	76
StyD4I	CCNGG	6 cut(s)	166, 1037, 1186, 1259, 1994, 2593
StyI	CCWWGG	5 cut(s)	782, 965, 1821, 2320, 2538
TaaI	ACNGT	5 cut(s)	1115, 1792, 1944, 2431, 2689
TaiI	ACGT	2 cut(s)	308, 1533
TaqI	TCGA	4 cut(s)	476, 1604, 1722, 2589
TaqII	GACCGA	1 cut(s)	765
TatI	WGTACW	3 cut(s)	320, 445, 1132
TauI	GCSGC	2 cut(s)	25, 65
TfiI	GAWTC	8 cut(s)	206, 635, 686, 710, 983, 1325, 1360, 2087
TscAI	CASTG	4 cut(s)	1563, 1947, 2105, 2694
TseFI	GTSAC	4 cut(s)	777, 1541, 2050, 2683
TseI	GCWGC	8 cut(s)	620, 822, 912, 1457, 1562, 1565, 2129, 2642
Tsp45I	GTSAC	4 cut(s)	777, 1541, 2050, 2683
TspDTI	ATGAA	8 cut(s)	42, 102, 573, 1268, 1470, 1579, 2232, 2396
TspGWI	ACGGA	3 cut(s)	344, 1219, 1228
TspRI	CASTG	4 cut(s)	1563, 1947, 2105, 2694
VpaK11BI	GGWCC	3 cut(s)	538, 1652, 1697
XapI	RAATTY	4 cut(s)	660, 1337, 2107, 2723
XbaI	TCTAGA	1 cut(s)	1711
XceI	RCATGY	3 cut(s)	1868, 1936, 2036
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2002
XmaJI	CCTAGG	1 cut(s)	965
XmiI	GTMKAC	2 cut(s)	896, 1722
XmnI	GAANNNNTTC	3 cut(s)	1290, 1626, 1965
XspI	CTAG	7 cut(s)	15, 66, 420, 966, 1080, 1712, 2058
ZrmI	AGTACT	1 cut(s)	322
Zsp2I	ATGCAT	2 cut(s)	1060, 1843

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.