Rmu_sc0005786.1_g000007

Leucine-rich repeat receptor-like tyrosine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005786.1
OG0008490
Physical Location & Seq
Forward (+)
37395 .. 40254
2860 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2733 bp
atgatcaatatctccaagcgtctaaatagtagcagtgtttcatggaacataaacagtgaaccaaacccatgtctctggaaaggagttaagtgtaagccacccaccaactcgtctgtaacccaactttccctgtccaagttttctctatcttcctcagatttcctcccaattgtttgccaacttgagtctttggagattcttgatgtgtcagtaaaccatctgaccacaatcccacctgagtttctcacagcttgtggaaacatagatgggctaaagcaactcaatttcagctttaacaatctggtcggttctttacctgactttgttggttttgctgggttggagtcgttggacctttctcgtaatcacttgagtggaggcattggctcagagttggatggattggtaaggctcagaatcttcaacatcagcttcaaccgttttagtgggactatccctacccaacttgggaagtccatggtcttggaggagcttcagctttctgtcaatacatttcaagggataatcccagttaaaattgcggactatcgcaatttgactctgattgatttgagcacaaatcatctttctggttcagttcctgagaattttggacagctatccaagttgaaggttctgattctatcttccaataacttaactggcaaaatcccagacagcctttccaatatcacaagcctcacgcggtttgcagccaatttaaacaagttcgatggtgcagttcctggtggaattacaaaacatctcaaaaatttggacttgagttataatacgttaagtgggtcgattccatcggaccttctgtctccatcgaatttgatgactgtggatttgtctaataacttgttgcagggatcaatacccacagagctgtctccgggactggttcggttgagattgggaagcaattcacttgttgggatggtaccctctgcatcactcccactccagaacttggtgtacttggaaatggaaaacaataagctgaatggtcccatacctcctaaattgggttcttgcagcaaattggcgctgttgaatttggctcagaatgaactgactggggctttgccggtgcagttgggaaacctcaccaatcttcaagtcttgaagcttcaatctaacaatcttgctggaggaatcccaactgagattactaaactgacgtacttgtctgttctgaatatcagcgggaatgctctgactggtacaataccaacagccgtttcaaacttgcagaaccttactagcatgaacttacaaggcaacaatctcagcggttccatccccaacactattggctccatgagttctctgttggagctccaacttggtcacaatttcttgagtggtgacattccaaggatgccagtatctttgcagattgttttgaatctcagcagcaacctttttgaaggaccaattcctaatcatctttccggactcactggattagaaattttggatctatctaacaacaagttctcaggtgagataccctcatttttatctgatcaaatgggagcattgacacagttgatactatctaacaatcagctcactggagttattccacacttcaattcttgggtcttggtcaacacaactggaaataaggatttgattaatgataccacaacctcatcggtaaagaaaggaaattcaaaggctttgataattgcacttgcagctgtggccggtgctgttgctactgtagccatgaccatccttgctgtatcactatcacggcacagttacagggttaatgatgaccaagtggagtctggagaagatgttcctcttcctgaggtccgccaaggtagtctcttaactgccaacgcaattcacagatcaagtatcgatttcagtacagccatggaggcagtttctgaccccgcaaacattgagctcaagactaagttttcaacttactacaaggccacaatgccgtctggatcaagctactttgtcaagaaactcaactggagtgacaagatattccaattggggagccatgacagattcgagaacgatttacagatatttggaaaactgagcaattccaatgtcatgactcctttggcctattttacgactgttgacagtgcttatctgttctatgagtttgctccaaaaggcaccctctttgatgcccttcattgtagctcagacaatgccatggattgggcaagtagatacagttctgcggttggagtagctcagggtcttgcttttcttcatggatgcacttcaggtccaatactcctcctagacctgtcaagccgaagcattttgctcaagtccctcaaagagcctcttattggagacgccgagctctgcaaagtgatcgatccctcaaagagcactggaagcctttccactgttgctggttcggttggttatattcctccagagtatgcatacactatgagggttacagtagccgggaacatctatagcttcggggtcattctccttgaattgctgacaggaaggccagcagttagtgaagggattgagttggccaattgggtactaagtaactcaaggcagcaagataaaattcttgatttgacgatcagcaggacatcaagtgctgtcagaagccagatgctagctgtactgaaagttgctcttggttgtgttagtgtgtcaccagaagcaaggccaagaatgaagagcgttcttaggatgcttctgaatgcaagatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

910

Amino Acids

97.59

Weight (kDa)

6.66

Isoelectric Point (pI)

35.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 63 - 124 1.3e-06 Leucine rich repeat
LRR_8 PF13855 184 - 236 2.5e-06 Leucine rich repeat
LRR_14 PF23598 342 - 452 1.7e-10 Leucine-rich repeat region
LRR_8 PF13855 397 - 454 3.5e-07 Leucine rich repeat
Pkinase PF00069 648 - 904 8.1e-20 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 677 - 906 5.2e-18 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 789
AasI GACNNNNNNGTC 1 cut(s) 1192
Acc65I GGTACC 1 cut(s) 946
AccB1I GGYRCC 2 cut(s) 946, 2159
AccB7I CCANNNNNTGG 2 cut(s) 976, 2205
AccII CGCG 1 cut(s) 706
AccIII TCCGGA 1 cut(s) 1460
AciI CCGC 7 cut(s) 542, 706, 1212, 1299, 1834, 1917, 2228
AclWI GGATC 4 cut(s) 883, 1494, 1984, 2366
AcoI YGGCCR 2 cut(s) 1716, 2544
AcsI RAATTY 7 cut(s) 607, 772, 835, 1060, 1479, 1681, 2583
AcuI CTGAAG 2 cut(s) 479, 2256
AcyI GRCGYC 1 cut(s) 2349
AfaI GTAC 7 cut(s) 948, 983, 1190, 1231, 1891, 2556, 2643
AfiI CCNNNNNNNGG 5 cut(s) 468, 976, 1031, 2205, 2342
AhdI GACNNNNNGTC 1 cut(s) 823
AjnI CCWGG 1 cut(s) 745
AjuI GAANNNNNNNTTGG 2 cut(s) 1231, 1263
AleI CACNNNNGTG 1 cut(s) 372
AloI GAACNNNNNNTCC 2 cut(s) 1800, 1832
Alw21I GWGCWC 5 cut(s) 578, 1347, 1932, 2358, 2387
Alw26I GTCTC 5 cut(s) 77, 831, 900, 1850, 2340
AlwI GGATC 4 cut(s) 883, 1494, 1984, 2366
AlwNI CAGNNNCTG 3 cut(s) 602, 746, 1910
Aor13HI TCCGGA 1 cut(s) 1460
AoxI GGCC 6 cut(s) 1716, 1959, 2103, 2516, 2544, 2687
ApeKI GCWGC 5 cut(s) 713, 1041, 1422, 1709, 2572
ApoI RAATTY 7 cut(s) 607, 772, 835, 1060, 1479, 1681, 2583
ArsI GACNNNNNNTTYG 4 cut(s) 835, 867, 1072, 1104
AseI ATTAAT 1 cut(s) 1647
Asp700I GAANNNNTTC 3 cut(s) 928, 1815, 2395
Asp718I GGTACC 1 cut(s) 946
AspLEI GCGC 1 cut(s) 1054
AspS9I GGNCC 6 cut(s) 352, 817, 1013, 1439, 1831, 2276
AsuC2I CCSGG 2 cut(s) 900, 2467
AsuHPI GGTGA 4 cut(s) 1105, 1385, 1523, 2667
AsuNHI GCTAGC 1 cut(s) 2635
AvaII GGWCC 6 cut(s) 352, 817, 1013, 1439, 1831, 2276
AxyI CCTNAGG 1 cut(s) 1827
BalI TGGCCA 1 cut(s) 2546
BanI GGYRCC 2 cut(s) 946, 2159
BanII GRGCYC 3 cut(s) 1347, 1932, 2358
Bbv12I GWGCWC 5 cut(s) 578, 1347, 1932, 2358, 2387
BbvI GCAGC 5 cut(s) 725, 1053, 1434, 1721, 2584
BccI CCATC 9 cut(s) 225, 260, 392, 728, 820, 838, 937, 1313, 1754
BceAI ACGGC 3 cut(s) 1229, 1784, 1954
BcgI CGANNNNNNTGC 2 cut(s) 2350, 2384
BciT130I CCWGG 1 cut(s) 747
BclI TGATCA 2 cut(s) 3, 1534
BcnI CCSGG 2 cut(s) 900, 2467
BcoDI GTCTC 5 cut(s) 77, 831, 900, 1850, 2340
BfaI CTAG 3 cut(s) 1269, 2291, 2636
BfmI CTRYAG 2 cut(s) 1734, 2476
BfoI RGCGCY 1 cut(s) 1055
BglI GCCNNNNNGGC 1 cut(s) 1901
BisI GCNGC 5 cut(s) 714, 1042, 1423, 1710, 2573
BlsI GCNGC 5 cut(s) 715, 1043, 1424, 1711, 2574
Bme1390I CCNGG 3 cut(s) 747, 900, 2467
Bme18I GGWCC 6 cut(s) 352, 817, 1013, 1439, 1831, 2276
BmeRI GACNNNNNGTC 1 cut(s) 823
BmgT120I GGNCC 6 cut(s) 352, 817, 1013, 1439, 1831, 2276
BmiI GGNNCC 6 cut(s) 948, 1015, 1303, 1324, 2033, 2161
BmrFI CCNGG 3 cut(s) 747, 900, 2467
BmrI ACTGGG 2 cut(s) 524, 1092
BmsI GCATC 6 cut(s) 965, 1377, 2161, 2255, 2622, 2703
BmtI GCTAGC 1 cut(s) 2639
BmuI ACTGGG 2 cut(s) 524, 1092
BplI GAGNNNNNCTC 2 cut(s) 1505, 1537
BpmI CTGGAG 6 cut(s) 953, 1176, 1605, 1827, 2026, 2415
Bpu10I CCTNAGC 1 cut(s) 2241
BpuEI CTTGAG 7 cut(s) 203, 391, 802, 1387, 1916, 2303, 2551
BpuMI CCSGG 2 cut(s) 900, 2467
Bsa29I ATCGAT 2 cut(s) 1881, 2370
BsaBI GATNNNNATC 1 cut(s) 8
BsaHI GRCGYC 1 cut(s) 2349
BsaJI CCNNGG 5 cut(s) 477, 1382, 1837, 1896, 2199
BsaWI WCCGGW 1 cut(s) 1460
BsaXI ACNNNNNCTCC 4 cut(s) 951, 981, 1800, 1830
Bsc4I CCNNNNNNNGG 5 cut(s) 468, 976, 1031, 2205, 2342
Bse118I RCCGGY 2 cut(s) 1093, 1718
Bse21I CCTNAGG 1 cut(s) 1827
Bse8I GATNNNNATC 1 cut(s) 8
BseAI TCCGGA 1 cut(s) 1460
BseBI CCWGG 1 cut(s) 747
BseCI ATCGAT 2 cut(s) 1881, 2370
BseDI CCNNGG 5 cut(s) 477, 1382, 1837, 1896, 2199
BseGI GGATG 7 cut(s) 403, 948, 1305, 1392, 1746, 2270, 2718
BseJI GATNNNNATC 1 cut(s) 8
BseLI CCNNNNNNNGG 5 cut(s) 468, 976, 1031, 2205, 2342
BseRI GAGGAG 2 cut(s) 503, 2276
BseXI GCAGC 5 cut(s) 725, 1053, 1434, 1721, 2584
BseYI CCCAGC 1 cut(s) 335
BsgI GTGCAG 2 cut(s) 759, 1118
Bsh1236I CGCG 1 cut(s) 706
BshFI GGCC 6 cut(s) 1718, 1961, 2105, 2518, 2546, 2689
BshNI GGYRCC 2 cut(s) 946, 2159
BshVI ATCGAT 2 cut(s) 1881, 2370
BsiHKAI GWGCWC 5 cut(s) 578, 1347, 1932, 2358, 2387
BsiSI CCGG 5 cut(s) 899, 1094, 1461, 1719, 2466
BslFI GGGAC 4 cut(s) 463, 915, 999, 2308
BslI CCNNNNNNNGG 5 cut(s) 468, 976, 1031, 2205, 2342
BsmAI GTCTC 5 cut(s) 77, 831, 900, 1850, 2340
BsmBI CGTCTC 1 cut(s) 2340
BsmFI GGGAC 4 cut(s) 463, 915, 999, 2308
BsmI GAATGC 2 cut(s) 1222, 2728
BsnI GGCC 6 cut(s) 1718, 1961, 2105, 2518, 2546, 2689
Bsp1286I GDGCHC 5 cut(s) 578, 1347, 1932, 2358, 2387
Bsp13I TCCGGA 1 cut(s) 1460
Bsp143I GATC 9 cut(s) 3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
Bsp19I CCATGG 3 cut(s) 477, 1896, 2199
BspACI CCGC 7 cut(s) 542, 706, 1212, 1299, 1834, 1917, 2228
BspANI GGCC 6 cut(s) 1718, 1961, 2105, 2518, 2546, 2689
BspDI ATCGAT 2 cut(s) 1881, 2370
BspEI TCCGGA 1 cut(s) 1460
BspFNI CGCG 1 cut(s) 706
BspHI TCATGA 1 cut(s) 2091
BspLI GGNNCC 6 cut(s) 948, 1015, 1303, 1324, 2033, 2161
BspOI GCTAGC 1 cut(s) 2639
BspPI GGATC 4 cut(s) 883, 1494, 1984, 2366
BspQI GCTCTTC 1 cut(s) 2693
BspT107I GGYRCC 2 cut(s) 946, 2159
BsrFI RCCGGY 2 cut(s) 1093, 1718
BssAI RCCGGY 2 cut(s) 1093, 1718
BssECI CCNNGG 5 cut(s) 477, 1382, 1837, 1896, 2199
BssMI GATC 9 cut(s) 3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
BssNI GRCGYC 1 cut(s) 2349
BssT1I CCWWGG 5 cut(s) 477, 1382, 1837, 1896, 2199
Bst2UI CCWGG 1 cut(s) 747
Bst6I CTCTTC 2 cut(s) 1827, 2693
BstACI GRCGYC 1 cut(s) 2349
BstC8I GCNNGC 2 cut(s) 2520, 2637
BstDSI CCRYGG 3 cut(s) 477, 1896, 2199
BstF5I GGATG 7 cut(s) 403, 948, 1305, 1392, 1746, 2270, 2718
BstFNI CGCG 1 cut(s) 706
BstH2I RGCGCY 1 cut(s) 1055
BstHHI GCGC 1 cut(s) 1054
BstKTI GATC 9 cut(s) 6, 878, 1489, 1537, 1874, 1979, 2370, 2374, 2601
BstMAI GTCTC 5 cut(s) 77, 831, 900, 1850, 2340
BstMBI GATC 9 cut(s) 3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
BstMWI GCNNNNNNNGC 5 cut(s) 1709, 1715, 1736, 1901, 2391
BstNI CCWGG 1 cut(s) 747
BstSCI CCNGG 3 cut(s) 745, 898, 2465
BstSFI CTRYAG 2 cut(s) 1734, 2476
BstUI CGCG 1 cut(s) 706
BstV1I GCAGC 5 cut(s) 725, 1053, 1434, 1721, 2584
BstX2I RGATCY 1 cut(s) 1486
BstXI CCANNNNNNTGG 2 cut(s) 75, 484
BstYI RGATCY 1 cut(s) 1486
Bsu15I ATCGAT 2 cut(s) 1881, 2370
Bsu36I CCTNAGG 1 cut(s) 1827
BsuRI GGCC 6 cut(s) 1718, 1961, 2105, 2518, 2546, 2689
BsuTUI ATCGAT 2 cut(s) 1881, 2370
BtgI CCRYGG 3 cut(s) 477, 1896, 2199
BtsCI GGATG 7 cut(s) 403, 948, 1305, 1392, 1746, 2270, 2718
BtsI GCAGTG 1 cut(s) 40
BtsIMutI CAGTG 7 cut(s) 40, 61, 1467, 1581, 2131, 2385, 2400
Cac8I GCNNGC 2 cut(s) 2520, 2637
CaiI CAGNNNCTG 3 cut(s) 602, 746, 1910
CciI TCATGA 1 cut(s) 2091
CfoI GCGC 1 cut(s) 1054
Cfr10I RCCGGY 2 cut(s) 1093, 1718
Cfr13I GGNCC 6 cut(s) 352, 817, 1013, 1439, 1831, 2276
ClaI ATCGAT 2 cut(s) 1881, 2370
CseI GACGC 2 cut(s) 8, 2357
Csp6I GTAC 7 cut(s) 947, 982, 1189, 1230, 1890, 2555, 2642
CviQI GTAC 7 cut(s) 947, 982, 1189, 1230, 1890, 2555, 2642
DpnI GATC 9 cut(s) 5, 877, 1488, 1536, 1873, 1978, 2369, 2373, 2600
DpnII GATC 9 cut(s) 3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
DraI TTTAAA 1 cut(s) 723
DrdI GACNNNNNNGTC 1 cut(s) 1192
DriI GACNNNNNGTC 1 cut(s) 823
DseDI GACNNNNNNGTC 1 cut(s) 1192
EaeI YGGCCR 2 cut(s) 1716, 2544
Eam1104I CTCTTC 2 cut(s) 1827, 2693
Eam1105I GACNNNNNGTC 1 cut(s) 823
EarI CTCTTC 2 cut(s) 1827, 2693
EciI GGCGGA 1 cut(s) 1823
Ecl136II GAGCTC 3 cut(s) 1345, 1930, 2356
Eco130I CCWWGG 5 cut(s) 477, 1382, 1837, 1896, 2199
Eco24I GRGCYC 3 cut(s) 1347, 1932, 2358
Eco47I GGWCC 6 cut(s) 352, 817, 1013, 1439, 1831, 2276
Eco53kI GAGCTC 3 cut(s) 1345, 1930, 2356
Eco57I CTGAAG 2 cut(s) 479, 2256
Eco81I CCTNAGG 1 cut(s) 1827
EcoICRI GAGCTC 3 cut(s) 1345, 1930, 2356
EcoRII CCWGG 1 cut(s) 745
EcoT14I CCWWGG 5 cut(s) 477, 1382, 1837, 1896, 2199
EcoT22I ATGCAT 1 cut(s) 2443
EcoT38I GRGCYC 3 cut(s) 1347, 1932, 2358
ErhI CCWWGG 5 cut(s) 477, 1382, 1837, 1896, 2199
Esp3I CGTCTC 1 cut(s) 2340
FalI AAGNNNNNCTT 4 cut(s) 2322, 2354, 2640, 2672
FaqI GGGAC 4 cut(s) 463, 915, 999, 2308
FauI CCCGC 2 cut(s) 1205, 1924
FbaI TGATCA 2 cut(s) 3, 1534
Fnu4HI GCNGC 5 cut(s) 714, 1042, 1423, 1710, 2573
FokI GGATG 7 cut(s) 410, 955, 1292, 1399, 1733, 2277, 2725
FriOI GRGCYC 3 cut(s) 1347, 1932, 2358
Fsp4HI GCNGC 5 cut(s) 714, 1042, 1423, 1710, 2573
FspBI CTAG 3 cut(s) 1269, 2291, 2636
GlaI GCGC 1 cut(s) 1053
GluI GCNGC 5 cut(s) 714, 1042, 1423, 1710, 2573
GsaI CCCAGC 1 cut(s) 339
GsuI CTGGAG 6 cut(s) 953, 1176, 1605, 1827, 2026, 2415
HaeII RGCGCY 1 cut(s) 1055
HaeIII GGCC 6 cut(s) 1718, 1961, 2105, 2518, 2546, 2689
HapII CCGG 5 cut(s) 899, 1094, 1461, 1719, 2466
HgaI GACGC 2 cut(s) 8, 2357
HhaI GCGC 1 cut(s) 1054
Hin1I GRCGYC 1 cut(s) 2349
Hin6I GCGC 1 cut(s) 1052
HinP1I GCGC 1 cut(s) 1052
HincII GTYRAC 2 cut(s) 1621, 2122
HindII GTYRAC 2 cut(s) 1621, 2122
HindIII AAGCTT 1 cut(s) 1133
HpaII CCGG 5 cut(s) 899, 1094, 1461, 1719, 2466
HphI GGTGA 4 cut(s) 1105, 1385, 1523, 2667
Hpy166II GTNNAC 5 cut(s) 59, 214, 982, 1621, 2122
Hpy8I GTNNAC 5 cut(s) 59, 214, 982, 1621, 2122
HpyAV CCTTC 6 cut(s) 625, 830, 1430, 2186, 2508, 2525
HpyCH4IV ACGT 2 cut(s) 794, 1187
HpyF10VI GCNNNNNNNGC 5 cut(s) 1709, 1715, 1736, 1901, 2391
HpySE526I ACGT 2 cut(s) 794, 1187
Hsp92I GRCGYC 1 cut(s) 2349
HspAI GCGC 1 cut(s) 1052
Kpn2I TCCGGA 1 cut(s) 1460
KpnI GGTACC 1 cut(s) 950
Ksp22I TGATCA 2 cut(s) 3, 1534
Kzo9I GATC 9 cut(s) 3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
LguI GCTCTTC 1 cut(s) 2693
LmnI GCTCC 7 cut(s) 490, 1328, 1342, 1350, 1544, 2031, 2155
Lsp1109I GCAGC 5 cut(s) 725, 1053, 1434, 1721, 2584
LweI GCATC 6 cut(s) 965, 1377, 2161, 2255, 2622, 2703
MaeI CTAG 3 cut(s) 1269, 2291, 2636
MaeII ACGT 2 cut(s) 794, 1187
MaeIII GTNAC 8 cut(s) 115, 1355, 1373, 1775, 2009, 2455, 2561, 2673
MalI GATC 9 cut(s) 5, 877, 1488, 1536, 1873, 1978, 2369, 2373, 2600
MboI GATC 9 cut(s) 3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
MboII GAAGA 8 cut(s) 141, 412, 639, 1112, 1814, 1823, 2249, 2710
MfeI CAATTG 3 cut(s) 168, 2024, 2548
MflI RGATCY 1 cut(s) 1486
MhlI GDGCHC 5 cut(s) 578, 1347, 1932, 2358, 2387
MlsI TGGCCA 1 cut(s) 2546
MluNI TGGCCA 1 cut(s) 2546
MlyI GAGTC 6 cut(s) 194, 353, 553, 1458, 1811, 2089
MmeI TCCRAC 6 cut(s) 321, 330, 375, 1320, 1372, 2212
Mox20I TGGCCA 1 cut(s) 2546
Mph1103I ATGCAT 1 cut(s) 2443
MroI TCCGGA 1 cut(s) 1460
MroXI GAANNNNTTC 3 cut(s) 928, 1815, 2395
MscI TGGCCA 1 cut(s) 2546
MseI TTAA 9 cut(s) 87, 294, 534, 659, 722, 797, 1647, 1785, 1850
MslI CAYNNNNRTG 1 cut(s) 372
Msp20I TGGCCA 1 cut(s) 2546
MspA1I CMGCKG 3 cut(s) 1212, 1299, 1712
MspI CCGG 5 cut(s) 899, 1094, 1461, 1719, 2466
MspR9I CCNGG 3 cut(s) 747, 900, 2467
MunI CAATTG 3 cut(s) 168, 2024, 2548
Mva1269I GAATGC 2 cut(s) 1222, 2728
MvaI CCWGG 1 cut(s) 747
MvnI CGCG 1 cut(s) 706
MwoI GCNNNNNNNGC 5 cut(s) 1709, 1715, 1736, 1901, 2391
NciI CCSGG 2 cut(s) 900, 2467
NcoI CCATGG 3 cut(s) 477, 1896, 2199
NdeII GATC 9 cut(s) 3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
NheI GCTAGC 1 cut(s) 2635
NlaIV GGNNCC 6 cut(s) 948, 1015, 1303, 1324, 2033, 2161
NmeAIII GCCGAG 1 cut(s) 2377
NmuCI GTSAC 4 cut(s) 1355, 1373, 2009, 2673
NsiI ATGCAT 1 cut(s) 2443
OliI CACNNNNGTG 1 cut(s) 372
PagI TCATGA 1 cut(s) 2091
PciSI GCTCTTC 1 cut(s) 2693
PctI GAATGC 2 cut(s) 1222, 2728
PdmI GAANNNNTTC 3 cut(s) 928, 1815, 2395
PfeI GAWTC 7 cut(s) 196, 417, 640, 808, 1161, 1414, 2043
PflMI CCANNNNNTGG 2 cut(s) 976, 2205
PfoI TCCNGGA 1 cut(s) 898
PkrI GCNGC 5 cut(s) 715, 1043, 1424, 1711, 2574
PleI GAGTC 6 cut(s) 193, 352, 553, 1458, 1810, 2089
PpsI GAGTC 6 cut(s) 193, 352, 553, 1458, 1810, 2089
PshBI ATTAAT 1 cut(s) 1647
PsiI TTATAA 1 cut(s) 789
Psp124BI GAGCTC 3 cut(s) 1347, 1932, 2358
Psp6I CCWGG 1 cut(s) 745
PspFI CCCAGC 1 cut(s) 335
PspGI CCWGG 1 cut(s) 745
PspN4I GGNNCC 6 cut(s) 948, 1015, 1303, 1324, 2033, 2161
PspPI GGNCC 6 cut(s) 352, 817, 1013, 1439, 1831, 2276
PsrI GAACNNNNNNTAC 4 cut(s) 965, 997, 2206, 2238
PstNI CAGNNNCTG 3 cut(s) 602, 746, 1910
PsuI RGATCY 1 cut(s) 1486
PvuII CAGCTG 1 cut(s) 1712
RsaI GTAC 7 cut(s) 948, 983, 1190, 1231, 1891, 2556, 2643
RsaNI GTAC 7 cut(s) 947, 982, 1189, 1230, 1890, 2555, 2642
RseI CAYNNNNRTG 1 cut(s) 372
SacI GAGCTC 3 cut(s) 1347, 1932, 2358
SapI GCTCTTC 1 cut(s) 2693
SaqAI TTAA 9 cut(s) 87, 294, 534, 659, 722, 797, 1647, 1785, 1850
SatI GCNGC 5 cut(s) 714, 1042, 1423, 1710, 2573
Sau3AI GATC 9 cut(s) 3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
Sau96I GGNCC 6 cut(s) 352, 817, 1013, 1439, 1831, 2276
SchI GAGTC 6 cut(s) 194, 353, 553, 1458, 1811, 2089
ScrFI CCNGG 3 cut(s) 747, 900, 2467
SduI GDGCHC 5 cut(s) 578, 1347, 1932, 2358, 2387
SfaNI GCATC 6 cut(s) 965, 1377, 2161, 2255, 2622, 2703
SfcI CTRYAG 2 cut(s) 1734, 2476
SinI GGWCC 6 cut(s) 352, 817, 1013, 1439, 1831, 2276
SmiMI CAYNNNNRTG 1 cut(s) 372
SmlI CTYRAG 7 cut(s) 182, 370, 781, 1366, 1931, 2318, 2566
SmoI CTYRAG 7 cut(s) 182, 370, 781, 1366, 1931, 2318, 2566
SsiI CCGC 7 cut(s) 542, 706, 1212, 1299, 1834, 1917, 2228
SspMI CTAG 3 cut(s) 1269, 2291, 2636
SstI GAGCTC 3 cut(s) 1347, 1932, 2358
StyD4I CCNGG 3 cut(s) 745, 898, 2465
StyI CCWWGG 5 cut(s) 477, 1382, 1837, 1896, 2199
TaiI ACGT 2 cut(s) 797, 1190
TaqI TCGA 6 cut(s) 732, 806, 833, 1881, 2046, 2370
TatI WGTACW 3 cut(s) 981, 1889, 2641
TfiI GAWTC 7 cut(s) 196, 417, 640, 808, 1161, 1414, 2043
Tru1I TTAA 9 cut(s) 87, 294, 534, 659, 722, 797, 1647, 1785, 1850
Tru9I TTAA 9 cut(s) 87, 294, 534, 659, 722, 797, 1647, 1785, 1850
TscAI CASTG 7 cut(s) 40, 61, 1474, 1588, 2131, 2392, 2407
TseFI GTSAC 4 cut(s) 1355, 1373, 2009, 2673
TseI GCWGC 5 cut(s) 713, 1041, 1422, 1709, 2572
Tsp45I GTSAC 4 cut(s) 1355, 1373, 2009, 2673
TspDTI ATGAA 6 cut(s) 30, 1089, 1289, 2168, 2249, 2711
TspRI CASTG 7 cut(s) 40, 61, 1474, 1588, 2131, 2392, 2407
Van91I CCANNNNNTGG 2 cut(s) 976, 2205
VpaK11BI GGWCC 6 cut(s) 352, 817, 1013, 1439, 1831, 2276
VspI ATTAAT 1 cut(s) 1647
XapI RAATTY 7 cut(s) 607, 772, 835, 1060, 1479, 1681, 2583
XcmI CCANNNNNNNNNTGG 1 cut(s) 1802
XmnI GAANNNNTTC 3 cut(s) 928, 1815, 2395
XspI CTAG 3 cut(s) 1269, 2291, 2636
Zsp2I ATGCAT 1 cut(s) 2443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.