Rmu_sc0005870.1_g000005

PPR repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005870.1
OG0007852
Physical Location & Seq
Forward (+)
17401 .. 19793
2393 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2334 bp
atgccccctcctcccaagttctccttgttctacggccaccgcaaaccctcccggaaccgccccaccgtccgcggcagccgcttctctcccccaaaacccaaccccaccccaactcaatcccagcccttcgatctctccaagtgggacccccaccaatctccgccgtccacctcctccacctccacccccaaccccgccgtccccctctccttcctctcccccatcgcccgcttcatcctcgacgccttccgcaagaaccgcaaccgctggggcccgccggtcgtctcggagctccacaagctccgccgcgtcacgcccgacctggtcgccgaggtcctcaaggtccaaaacgaccccgtttcggccgccaagctcttccactgggcaggtaagcagaagggtttcaagcacaccttcgcttcctacaatgccttgacctattgcctgaaccgggcccaccggttcaggtcggccgaccaagtccccgacttgatggagtctcaggggaaacccccaaccgagaaacagtttgagattctgatcagaatgcactctgatgccaatagaggtcttagggtgtatcatgtctatgagaagatgaagaagtttggggttaaacccagggtttatttgtacaatagggtaatggatgcgttggtgaaaacaggtcatttggatttggcattgtcggtttacgacgattttcggggcgatgggctggtggaggagagtgtgacttttatgattttgataaaggggatgtgtaaatgtgggagagttgatgaaatgttggggcttttggatagaatgagggtgagtttgtgtaagccggacgtgtttgcgtacaccgcaatgataaaggtgatggtttcggagggggatttggatggttgtttgaaggtttgggaggaaatgaggagggatagagttgaggcggatgctatggcgtatgtgactctggttacggggttgtgtaaaggagggagggtggagaaggggtatgagttgtttagggagatgaaggagaagggtttcttgattgatagagcaatttatggggtgctggttgaggggtttgtggaagacaggaaggttggggcagcgtgtgatttgttgaaggatttggtgggatcagggtatagagcagatttggggatatataattctctgatcaagggtttatgtgatgttaaacgggttgataaggcttataagcttttccgagttgcagttcaagagggtcttgggccggattttgccacggtgaatcccattctggtgtcttatgctgatatgagaaaaatggataacttttgcgagttgcttgcacagatggagaaatgcggttgtcctgttattgatgatcttttgaaattcttttccattgttgctgaaaaggaggatggagtcatgatggctttggaagtgtttgaagacttgaaagttaaaaattattctagtgttgcgatctacaatatccttattgccagcctccacaaatttgggaaagtgaagaaagcattatccctctttgatgagatgaagagttttgatttccagccggattcgtccacttatagctctgccattatgtgttatattgaagaaggggatctccatgaagcttgtgcctgtcataataagataattgaaatgtcttgtgttccttctattgctgcctatcgctctcttgctaaagggcttttcaatgttggagagattgatgcagttatgctgctagtccgggactgcttagccagtgtgacaagtgggcccatgacattcaactctgcgattatgtgttatattgaagaaggggatctccatgaagcttgtgcctgtcataataagataattgaaatgtcttgtgttccttctattgctgcctatcgctctcttgctaaagggcttttcaatgttggagagattgatgcagttatgctgctagtccgggactgcttagccagtgtgacaagtgggcccatgacattcaagtattctcttaccattctccatgcatgtagatccaataatgctgagaaggtgattgatgtactgaatgagatgatgcagcagggttgtccaccagatcatgttatatactctgctataatctctggcatgtgtaagcatggcacaatagaggaggcaaggaaggtattttcaaatttgaaagagcgcaaacttataacagaagccaacatgattgtgtatgatgatatattaattgaacacatgaagaagaagacagcagatctggtagtgtcagggttgaagttttttggtttagaatccaagctgaaagcaaagggttgtaaactgctgtcaggttga

Protein Analysis

777

Amino Acids

86.97

Weight (kDa)

8.52

Isoelectric Point (pI)

39.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 118 - 275 2.1e-09 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 244 - 288 1.1e-10 PPR repeat family
PPR_1 PF12854 244 - 271 2.9e-06 PPR repeat
PPR_2 PF13041 277 - 326 5.6e-11 PPR repeat family
PPR_1 PF12854 310 - 341 7.4e-07 PPR repeat
PPR_2 PF13041 313 - 360 1.9e-07 PPR repeat family
PPR PF01535 316 - 345 4.6e-07 PPR repeat
PPR_1 PF12854 379 - 408 1.2e-06 PPR repeat
PPR_2 PF13041 385 - 423 4.2e-06 PPR repeat family
PPR_2 PF13041 487 - 530 3.3e-11 PPR repeat family
PPR PF01535 490 - 518 3.4e-06 PPR repeat
PPR_1 PF12854 693 - 722 6.3e-09 PPR repeat
PPR_2 PF13041 696 - 728 4.7e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1212, 2189
Acc36I ACCTGC 1 cut(s) 377
AccII CGCG 2 cut(s) 72, 309
AclWI GGATC 4 cut(s) 1138, 1620, 1827, 2019
AcoI YGGCCR 3 cut(s) 34, 363, 471
AcsI RAATTY 3 cut(s) 1373, 1499, 2167
AcyI GRCGYC 1 cut(s) 243
AfaI GTAC 3 cut(s) 635, 845, 2055
AfiI CCNNNNNNNGG 2 cut(s) 361, 451
AflIII ACRYGT 1 cut(s) 834
AgeI ACCGGT 1 cut(s) 459
AjiI CACGTC 1 cut(s) 835
AjnI CCWGG 2 cut(s) 321, 620
AluBI AGCT 8 cut(s) 292, 301, 373, 1216, 1581, 1625, 1832, 2299
AluI AGCT 8 cut(s) 292, 301, 373, 1216, 1581, 1625, 1832, 2299
Alw21I GWGCWC 1 cut(s) 294
Alw26I GTCTC 2 cut(s) 289, 504
AlwI GGATC 4 cut(s) 1138, 1620, 1827, 2019
AoxI GGCC 8 cut(s) 34, 271, 363, 453, 471, 1247, 1772, 1979
ApaI GGGCCC 4 cut(s) 275, 457, 1776, 1983
ApeKI GCWGC 7 cut(s) 75, 1100, 1676, 1735, 1883, 1942, 2071
ApoI RAATTY 3 cut(s) 1373, 1499, 2167
AseI ATTAAT 1 cut(s) 2225
AsiGI ACCGGT 1 cut(s) 459
Asp700I GAANNNNTTC 2 cut(s) 401, 1031
AspLEI GCGC 1 cut(s) 2181
AsuC2I CCSGG 4 cut(s) 52, 452, 1745, 1952
AsuHPI GGTGA 5 cut(s) 670, 826, 874, 1276, 2056
AvaII GGWCC 3 cut(s) 145, 334, 343
BaeGI GKGCMC 4 cut(s) 275, 457, 1776, 1983
BanII GRGCYC 5 cut(s) 275, 294, 457, 1776, 1983
BbsI GAAGAC 3 cut(s) 1089, 1440, 2252
Bbv12I GWGCWC 1 cut(s) 294
BbvI GCAGC 7 cut(s) 87, 1112, 1663, 1722, 1870, 1929, 2083
BccI CCATC 8 cut(s) 230, 487, 707, 859, 881, 1327, 1397, 1408
BceAI ACGGC 3 cut(s) 49, 148, 182
BcgI CGANNNNNNTGC 2 cut(s) 1307, 1341
BciT130I CCWGG 2 cut(s) 323, 622
BclI TGATCA 2 cut(s) 540, 1170
BcnI CCSGG 4 cut(s) 52, 452, 1745, 1952
BcoDI GTCTC 2 cut(s) 289, 504
BfaI CTAG 3 cut(s) 1458, 1739, 1946
BfuAI ACCTGC 1 cut(s) 377
BglII AGATCT 1 cut(s) 2254
BlpI GCTNAGC 2 cut(s) 1753, 1960
Bme1390I CCNGG 6 cut(s) 52, 323, 452, 622, 1745, 1952
Bme18I GGWCC 3 cut(s) 145, 334, 343
BmgBI CACGTC 1 cut(s) 835
BmiI GGNNCC 8 cut(s) 56, 146, 147, 272, 273, 455, 1774, 1981
BmrFI CCNGG 6 cut(s) 52, 323, 452, 622, 1745, 1952
BmrI ACTGGG 1 cut(s) 391
BmsI GCATC 6 cut(s) 547, 640, 928, 1714, 1921, 2058
BmuI ACTGGG 1 cut(s) 391
BpiI GAAGAC 3 cut(s) 1089, 1440, 2252
Bpu1102I GCTNAGC 2 cut(s) 1753, 1960
BpuEI CTTGAG 1 cut(s) 323
BpuMI CCSGG 4 cut(s) 52, 452, 1745, 1952
BsaBI GATNNNNATC 1 cut(s) 539
BsaHI GRCGYC 1 cut(s) 243
BsaJI CCNNGG 5 cut(s) 70, 330, 620, 621, 1260
BsaWI WCCGGW 1 cut(s) 459
BsaXI ACNNNNNCTCC 4 cut(s) 972, 983, 1002, 1013
Bsc4I CCNNNNNNNGG 2 cut(s) 361, 451
Bse118I RCCGGY 2 cut(s) 277, 459
Bse1I ACTGG 3 cut(s) 386, 1758, 1965
Bse3DI GCAATG 1 cut(s) 858
Bse8I GATNNNNATC 1 cut(s) 539
BseBI CCWGG 2 cut(s) 323, 622
BseDI CCNNGG 5 cut(s) 70, 330, 620, 621, 1260
BseGI GGATG 6 cut(s) 234, 655, 765, 892, 943, 1408
BseJI GATNNNNATC 1 cut(s) 539
BseLI CCNNNNNNNGG 2 cut(s) 361, 451
BseMI GCAATG 1 cut(s) 858
BseMII CTCAG 2 cut(s) 515, 2028
BseNI ACTGG 3 cut(s) 386, 1758, 1965
BseRI GAGGAG 4 cut(s) 163, 740, 931, 2159
BseSI GKGCMC 4 cut(s) 275, 457, 1776, 1983
BseX3I CGGCCG 2 cut(s) 363, 471
BseXI GCAGC 7 cut(s) 87, 1112, 1663, 1722, 1870, 1929, 2083
BseYI CCCAGC 2 cut(s) 120, 267
Bsh1236I CGCG 2 cut(s) 72, 309
Bsh1285I CGRYCG 3 cut(s) 282, 366, 474
BshFI GGCC 8 cut(s) 36, 273, 365, 455, 473, 1249, 1774, 1981
BshTI ACCGGT 1 cut(s) 459
BsiEI CGRYCG 3 cut(s) 282, 366, 474
BsiHKAI GWGCWC 1 cut(s) 294
BsiSI CCGG 9 cut(s) 52, 278, 451, 460, 830, 1250, 1562, 1744, 1951
BslFI GGGAC 5 cut(s) 158, 185, 467, 1760, 1967
BslI CCNNNNNNNGG 2 cut(s) 361, 451
BsmAI GTCTC 2 cut(s) 289, 504
BsmBI CGTCTC 1 cut(s) 289
BsmFI GGGAC 5 cut(s) 158, 185, 467, 1760, 1967
BsmI GAATGC 1 cut(s) 552
BsnI GGCC 8 cut(s) 36, 273, 365, 455, 473, 1249, 1774, 1981
Bsp120I GGGCCC 4 cut(s) 271, 453, 1772, 1979
Bsp1286I GDGCHC 5 cut(s) 275, 294, 457, 1776, 1983
Bsp1407I TGTACA 1 cut(s) 633
Bsp1720I GCTNAGC 2 cut(s) 1753, 1960
BspANI GGCC 8 cut(s) 36, 273, 365, 455, 473, 1249, 1774, 1981
BspCNI CTCAG 2 cut(s) 514, 2029
BspFNI CGCG 2 cut(s) 72, 309
BspHI TCATGA 1 cut(s) 1410
BspLI GGNNCC 8 cut(s) 56, 146, 147, 272, 273, 455, 1774, 1981
BspMI ACCTGC 1 cut(s) 377
BspPI GGATC 4 cut(s) 1138, 1620, 1827, 2019
BspQI GCTCTTC 1 cut(s) 380
BsrDI GCAATG 1 cut(s) 858
BsrFI RCCGGY 2 cut(s) 277, 459
BsrGI TGTACA 1 cut(s) 633
BsrI ACTGG 3 cut(s) 386, 1758, 1965
BssAI RCCGGY 2 cut(s) 277, 459
BssECI CCNNGG 5 cut(s) 70, 330, 620, 621, 1260
BssNI GRCGYC 1 cut(s) 243
Bst2UI CCWGG 2 cut(s) 323, 622
Bst4CI ACNGT 3 cut(s) 67, 528, 1264
Bst6I CTCTTC 2 cut(s) 380, 1538
BstACI GRCGYC 1 cut(s) 243
BstAUI TGTACA 1 cut(s) 633
BstC8I GCNNGC 4 cut(s) 229, 275, 1326, 1489
BstDEI CTNAG 5 cut(s) 501, 572, 1753, 1960, 2037
BstDSI CCRYGG 2 cut(s) 70, 1260
BstF5I GGATG 6 cut(s) 234, 655, 765, 892, 943, 1408
BstFNI CGCG 2 cut(s) 72, 309
BstHHI GCGC 1 cut(s) 2181
BstMAI GTCTC 2 cut(s) 289, 504
BstMCI CGRYCG 3 cut(s) 282, 366, 474
BstMWI GCNNNNNNNGC 4 cut(s) 78, 258, 298, 848
BstNI CCWGG 2 cut(s) 323, 622
BstNSI RCATGY 2 cut(s) 2022, 2125
BstSCI CCNGG 6 cut(s) 50, 321, 450, 620, 1743, 1950
BstSLI GKGCMC 4 cut(s) 275, 457, 1776, 1983
BstUI CGCG 2 cut(s) 72, 309
BstV1I GCAGC 7 cut(s) 87, 1112, 1663, 1722, 1870, 1929, 2083
BstV2I GAAGAC 3 cut(s) 1089, 1440, 2252
BstX2I RGATCY 4 cut(s) 1612, 1819, 2024, 2254
BstXI CCANNNNNNTGG 1 cut(s) 1502
BstYI RGATCY 4 cut(s) 1612, 1819, 2024, 2254
BstZI CGGCCG 2 cut(s) 363, 471
BsuRI GGCC 8 cut(s) 36, 273, 365, 455, 473, 1249, 1774, 1981
BtgI CCRYGG 2 cut(s) 70, 1260
BtgZI GCGATG 2 cut(s) 208, 726
BtrI CACGTC 1 cut(s) 835
BtsCI GGATG 6 cut(s) 234, 655, 765, 892, 943, 1408
BtsIMutI CAGTG 3 cut(s) 379, 1765, 1972
BveI ACCTGC 1 cut(s) 377
Cac8I GCNNGC 4 cut(s) 229, 275, 1326, 1489
CciI TCATGA 1 cut(s) 1410
CfoI GCGC 1 cut(s) 2181
Cfr10I RCCGGY 2 cut(s) 277, 459
Cfr42I CCGCGG 1 cut(s) 73
CseI GACGC 2 cut(s) 251, 298
CsiI ACCWGGT 1 cut(s) 321
Csp6I GTAC 3 cut(s) 634, 844, 2054
CspAI ACCGGT 1 cut(s) 459
CviQI GTAC 3 cut(s) 634, 844, 2054
DdeI CTNAG 5 cut(s) 501, 572, 1753, 1960, 2037
EaeI YGGCCR 3 cut(s) 34, 363, 471
EagI CGGCCG 2 cut(s) 363, 471
Eam1104I CTCTTC 2 cut(s) 380, 1538
EarI CTCTTC 2 cut(s) 380, 1538
EciI GGCGGA 3 cut(s) 150, 293, 950
Ecl136II GAGCTC 1 cut(s) 292
EclXI CGGCCG 2 cut(s) 363, 471
Eco24I GRGCYC 5 cut(s) 275, 294, 457, 1776, 1983
Eco47I GGWCC 3 cut(s) 145, 334, 343
Eco52I CGGCCG 2 cut(s) 363, 471
Eco53kI GAGCTC 1 cut(s) 292
EcoICRI GAGCTC 1 cut(s) 292
EcoO109I RGGNCCY 3 cut(s) 145, 271, 334
EcoRII CCWGG 2 cut(s) 321, 620
EcoT22I ATGCAT 1 cut(s) 2020
EcoT38I GRGCYC 5 cut(s) 275, 294, 457, 1776, 1983
Esp3I CGTCTC 1 cut(s) 289
FalI AAGNNNNNCTT 8 cut(s) 8, 40, 398, 430, 1019, 1051, 1227, 1259
FaqI GGGAC 5 cut(s) 158, 185, 467, 1760, 1967
FauI CCCGC 3 cut(s) 202, 236, 282
FbaI TGATCA 2 cut(s) 540, 1170
FokI GGATG 6 cut(s) 221, 662, 772, 899, 950, 1415
FriOI GRGCYC 5 cut(s) 275, 294, 457, 1776, 1983
FspBI CTAG 3 cut(s) 1458, 1739, 1946
GlaI GCGC 1 cut(s) 2180
GsaI CCCAGC 2 cut(s) 124, 271
HaeIII GGCC 8 cut(s) 36, 273, 365, 455, 473, 1249, 1774, 1981
HapII CCGG 9 cut(s) 52, 278, 451, 460, 830, 1250, 1562, 1744, 1951
HgaI GACGC 2 cut(s) 251, 298
HhaI GCGC 1 cut(s) 2181
Hin1I GRCGYC 1 cut(s) 243
Hin6I GCGC 1 cut(s) 2179
HinP1I GCGC 1 cut(s) 2179
HindIII AAGCTT 3 cut(s) 1214, 1623, 1830
HinfI GANTC 7 cut(s) 497, 535, 955, 1267, 1407, 1565, 2291
HpaII CCGG 9 cut(s) 52, 278, 451, 460, 830, 1250, 1562, 1744, 1951
HphI GGTGA 5 cut(s) 670, 826, 874, 1276, 2056
Hpy166II GTNNAC 6 cut(s) 168, 694, 846, 1572, 2084, 2318
Hpy188I TCNGA 7 cut(s) 289, 540, 545, 556, 874, 1170, 1223
Hpy188III TCNNGA 3 cut(s) 1036, 1235, 1411
Hpy8I GTNNAC 6 cut(s) 168, 694, 846, 1572, 2084, 2318
Hpy99I CGWCG 2 cut(s) 245, 701
HpyCH4III ACNGT 3 cut(s) 67, 528, 1264
HpyCH4IV ACGT 1 cut(s) 834
HpyCH4V TGCA 7 cut(s) 550, 1229, 1328, 1727, 1934, 2018, 2071
HpyF10VI GCNNNNNNNGC 4 cut(s) 78, 258, 298, 848
HpyF3I CTNAG 5 cut(s) 501, 572, 1753, 1960, 2037
HpySE526I ACGT 1 cut(s) 834
Hsp92I GRCGYC 1 cut(s) 243
HspAI GCGC 1 cut(s) 2179
KflI GGGWCCC 1 cut(s) 145
Ksp22I TGATCA 2 cut(s) 540, 1170
KspI CCGCGG 1 cut(s) 73
LguI GCTCTTC 1 cut(s) 380
LmnI GCTCC 3 cut(s) 289, 297, 306
Lsp1109I GCAGC 7 cut(s) 87, 1112, 1663, 1722, 1870, 1929, 2083
LweI GCATC 6 cut(s) 547, 640, 928, 1714, 1921, 2058
MabI ACCWGGT 1 cut(s) 321
MaeI CTAG 3 cut(s) 1458, 1739, 1946
MaeII ACGT 1 cut(s) 834
MaeIII GTNAC 6 cut(s) 310, 733, 952, 961, 1762, 1969
MflI RGATCY 4 cut(s) 1612, 1819, 2024, 2254
MhlI GDGCHC 5 cut(s) 275, 294, 457, 1776, 1983
MluCI AATT 9 cut(s) 1050, 1162, 1373, 1450, 1499, 1647, 1854, 2167, 2226
MlyI GAGTC 3 cut(s) 506, 949, 1416
MmeI TCCRAC 2 cut(s) 1693, 1900
Mph1103I ATGCAT 1 cut(s) 2020
MroXI GAANNNNTTC 2 cut(s) 401, 1031
MseI TTAA 4 cut(s) 615, 1191, 1446, 2225
MslI CAYNNNNRTG 5 cut(s) 555, 588, 851, 1277, 2207
MspA1I CMGCKG 2 cut(s) 72, 267
MspI CCGG 9 cut(s) 52, 278, 451, 460, 830, 1250, 1562, 1744, 1951
MspR9I CCNGG 6 cut(s) 52, 323, 452, 622, 1745, 1952
Mva1269I GAATGC 1 cut(s) 552
MvaI CCWGG 2 cut(s) 323, 622
MvnI CGCG 2 cut(s) 72, 309
MwoI GCNNNNNNNGC 4 cut(s) 78, 258, 298, 848
NciI CCSGG 4 cut(s) 52, 452, 1745, 1952
NlaIV GGNNCC 8 cut(s) 56, 146, 147, 272, 273, 455, 1774, 1981
NmeAIII GCCGAG 1 cut(s) 355
NmuCI GTSAC 5 cut(s) 310, 733, 952, 1762, 1969
NsiI ATGCAT 1 cut(s) 2020
NspI RCATGY 2 cut(s) 2022, 2125
PagI TCATGA 1 cut(s) 1410
PasI CCCWGGG 1 cut(s) 621
PciSI GCTCTTC 1 cut(s) 380
PctI GAATGC 1 cut(s) 552
PdmI GAANNNNTTC 2 cut(s) 401, 1031
PfeI GAWTC 4 cut(s) 535, 1267, 1565, 2291
PflFI GACNNNGTC 2 cut(s) 323, 479
PfoI TCCNGGA 3 cut(s) 50, 1743, 1950
PinAI ACCGGT 1 cut(s) 459
PleI GAGTC 3 cut(s) 505, 949, 1415
PpsI GAGTC 3 cut(s) 505, 949, 1415
PpuMI RGGWCCY 2 cut(s) 145, 334
PshBI ATTAAT 1 cut(s) 2225
PsiI TTATAA 2 cut(s) 1212, 2189
Psp124BI GAGCTC 1 cut(s) 294
Psp5II RGGWCCY 2 cut(s) 145, 334
Psp6I CCWGG 2 cut(s) 321, 620
PspFI CCCAGC 2 cut(s) 120, 267
PspGI CCWGG 2 cut(s) 321, 620
PspN4I GGNNCC 8 cut(s) 56, 146, 147, 272, 273, 455, 1774, 1981
PspOMI GGGCCC 4 cut(s) 271, 453, 1772, 1979
PspPPI RGGWCCY 2 cut(s) 145, 334
PsuI RGATCY 4 cut(s) 1612, 1819, 2024, 2254
PsyI GACNNNGTC 2 cut(s) 323, 479
RsaI GTAC 3 cut(s) 635, 845, 2055
RsaNI GTAC 3 cut(s) 634, 844, 2054
RseI CAYNNNNRTG 5 cut(s) 555, 588, 851, 1277, 2207
SacI GAGCTC 1 cut(s) 294
SacII CCGCGG 1 cut(s) 73
SapI GCTCTTC 1 cut(s) 380
SaqAI TTAA 4 cut(s) 615, 1191, 1446, 2225
SchI GAGTC 3 cut(s) 506, 949, 1416
ScrFI CCNGG 6 cut(s) 52, 323, 452, 622, 1745, 1952
SduI GDGCHC 5 cut(s) 275, 294, 457, 1776, 1983
SexAI ACCWGGT 1 cut(s) 321
SfaNI GCATC 6 cut(s) 547, 640, 928, 1714, 1921, 2058
Sfr303I CCGCGG 1 cut(s) 73
SgrBI CCGCGG 1 cut(s) 73
SinI GGWCC 3 cut(s) 145, 334, 343
SmiMI CAYNNNNRTG 5 cut(s) 555, 588, 851, 1277, 2207
SmlI CTYRAG 1 cut(s) 338
SmoI CTYRAG 1 cut(s) 338
Sse9I AATT 9 cut(s) 1050, 1162, 1373, 1450, 1499, 1647, 1854, 2167, 2226
SspMI CTAG 3 cut(s) 1458, 1739, 1946
SstI GAGCTC 1 cut(s) 294
StyD4I CCNGG 6 cut(s) 50, 321, 450, 620, 1743, 1950
TaaI ACNGT 3 cut(s) 67, 528, 1264
TaiI ACGT 1 cut(s) 837
TaqI TCGA 2 cut(s) 129, 240
TasI AATT 9 cut(s) 1050, 1162, 1373, 1450, 1499, 1647, 1854, 2167, 2226
TatI WGTACW 2 cut(s) 633, 2053
TauI GCSGC 4 cut(s) 75, 81, 309, 368
TfiI GAWTC 4 cut(s) 535, 1267, 1565, 2291
Tru1I TTAA 4 cut(s) 615, 1191, 1446, 2225
Tru9I TTAA 4 cut(s) 615, 1191, 1446, 2225
TscAI CASTG 3 cut(s) 386, 1765, 1972
TseFI GTSAC 5 cut(s) 310, 733, 952, 1762, 1969
TseI GCWGC 7 cut(s) 75, 1100, 1676, 1735, 1883, 1942, 2071
Tsp45I GTSAC 5 cut(s) 310, 733, 952, 1762, 1969
TspDTI ATGAA 8 cut(s) 223, 614, 798, 1034, 1556, 1635, 1842, 2252
TspRI CASTG 3 cut(s) 386, 1765, 1972
Tth111I GACNNNGTC 2 cut(s) 323, 479
VpaK11BI GGWCC 3 cut(s) 145, 334, 343
VspI ATTAAT 1 cut(s) 2225
XapI RAATTY 3 cut(s) 1373, 1499, 2167
XceI RCATGY 2 cut(s) 2022, 2125
XmnI GAANNNNTTC 2 cut(s) 401, 1031
XspI CTAG 3 cut(s) 1458, 1739, 1946
Zsp2I ATGCAT 1 cut(s) 2020
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.