Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006458.1

Orthogroup ID

OG0006183

Physical Location & Seq

Genomic Coordinates Forward (+)

89910 .. 96489

Gene Structure 6580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

atgagtttcctcaaaggcctcatcgactctttaggctccgtcttctccgaatcctcctcctcctcctcatacccaaaccctaccgcttccaattcctccgccatggacggcgtagctgggcccggagctgcttcggtcacgaacgagcgcgtggcgtacaagctcaaggggtactttgatttggccaaggaagagatcgccaaggctgttagggctgaagaatggggcttggttgaagacgccgttgcacactataatagcgcccagagaattttagccgaagctagctccactccggtgccttcctttatcagcgccagtgagcgggagaaggcgaaatcgtatcgtcaaaagatatcaaaatggcagggtcaagtttctgataggttacaagtcttaagtagacgtccaggtggtacgtccataagcaagaccgtagctcctgcacgaactactgcagctacatcaacaacgttgaattcacgaaatcatgtgatacccaagactctgcatcccagtacaagcatgccagcaacgaggagtcagaccaataatattgtaagatcaaaacctgtgcaagattctggtgcaggttatgatgaaaagttggttgaaatgataaatagtgccatagtggatagaagtccttctgttaaatgggaagatgttgctggtcttgagaaggtgaagaaaactttgatggagatggttatcttaccgactaagagaagagatttgttcactggccttcggaggccagctcgaggtctgcttctgtttggtccacctggtaatgggaaaaccatgcttgctaaggcagttgcttcagaatcagaggcaaccttttttaatgtatctgcatcttcactgacatcaaaatgggtgggagaggctgaaaagctcgtgcggacacttttcatggttgctatatccagacagccatctgtaattttcatggatgagattgatagtatcatgtcaacaaggcaggcaaacgaaaatgatgcaagcagaaggttgaagtcagagtttctaattcagtttgatggagtgacatctaatcctaatgatctagtaattgtgattggtgctactaataagcctcaagaactagatgacgcagttcttaggagattggtgaagagagtatacatacctttaccagatctacctgctaggagacttctcctaagtcacaaactcaaaggccaagcattttccttaccaagtggagatcttgaacgacttgcaagagacactgaaggttattcaggaagtgatctacaagcattgtgtgaagaagcagcaatgatgccaattagggaacttggtgaaaacattctcaccatcaaggcaaatcagaaaaacccatttctgatcatcatggcggagaccgaaccggaaacccagaaaccccaagaaacccgaaagaggggagattggtccttaaaggacttcgagatcggaaagccgctgggcaaaggcaagttcgggcgggtctacgtcgcccgagaagtcaagagccaatacgtcgtggcattgaaggtgttgttcaagaagcagataaagaagtacaacattcaccaccagctgaagagagagatggagattcagacgagtctgaggcaccccaacattcttcgtctctatggttggttccatgatgatgagcgcatcgtcttgattcttgagtacgcccatggcggtgagctttatggccttttgagggattgtacctactttactgagaaacgagccgcgacttatatattgagcttagcggaagctttggcctattgtcatgagaaggatgtgattcatagggacataaagcctgaaaacttgttgcttgatcatgaggtatgtataagattggtcctattgaactatgctgttgatttgtttgaactctggattctgggttatggttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0001578 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0006810 GO:0006928 GO:0006996 GO:0006997 GO:0006998 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008017 GO:0008088 GO:0008089 GO:0008092 GO:0008150 GO:0008568 GO:0009987 GO:0010256 GO:0010458 GO:0010970 GO:0012505 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019896 GO:0022402 GO:0022411 GO:0022607 GO:0030496 GO:0030705 GO:0031090 GO:0031468 GO:0031965 GO:0031967 GO:0031975 GO:0034214 GO:0034643 GO:0042623 GO:0043014 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0046907 GO:0047497 GO:0048285 GO:0048487 GO:0051013 GO:0051179 GO:0051228 GO:0051230 GO:0051234 GO:0051259 GO:0051260 GO:0051301 GO:0051640 GO:0051641 GO:0051646 GO:0051649 GO:0051654 GO:0051656 GO:0061024 GO:0061640 GO:0065003 GO:0071840 GO:0072384 GO:0090148 GO:0098930 GO:0099111 GO:0140014 GO:0140096 GO:1902850 GO:1903008 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Vps4_C

Protein Analysis

643

Amino Acids

71.72

Weight (kDa)

9.19

Isoelectric Point (pI)

46.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	257 - 387	6.5e-39	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	412 - 446	1.2e-13	AAA+ lid domain
Pkinase	PF00069	486 - 625	4.6e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	487 - 624	1.9e-24	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45500 AT2G45500 AT2G45500 AT2G45500 AT2G45500
fragaria_vesca	FvH4_7g12180 FvH4_7g12180
malus_domestica	MD02G1200800.v1.1
prunus_persica	Prupe.2G148300_v2.0.a1 Prupe.2G148300_v2.0.a1 Prupe.2G148300_v2.0.a1
pyrus_communis	pycom02g16400
rosa_chinensis	RchiOBHm_Chr1g0350931
rosa_laevigata	RLG00000028440
rosa_multiflora	Rmu_sc0002665.1_g000019 Rmu_sc0006458.1_g000018
rosa_roxburghii	Rroxscaffold_4G00304290
rosa_rugosa	Rorug01G0075600 Rorug01G0215400 Rorug01G0215400 Rorug06G0023300
rosa_samantha	Rh1AG230100 Rh1BG075200 Rh1BG200000 Rh1CG214500 Rh1DG227800
rosa_wichuraiana	Rw1G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	409
Acc36I	ACCTGC	2 cut(s)	581, 1180
AccB1I	GGYRCC	2 cut(s)	298, 1626
AccBSI	CCGCTC	1 cut(s)	325
AccI	GTMKAC	3 cut(s)	403, 1149, 1500
AccII	CGCG	2 cut(s)	150, 1760
AclI	AACGTT	1 cut(s)	473
AcoI	YGGCCR	1 cut(s)	183
AcsI	RAATTY	2 cut(s)	270, 478
AcuI	CTGAAG	4 cut(s)	237, 810, 1281, 1613
AcyI	GRCGYC	2 cut(s)	240, 406
AfaI	GTAC	7 cut(s)	158, 173, 418, 520, 1574, 1694, 1735
AfiI	CCNNNNNNNGG	6 cut(s)	324, 764, 794, 1431, 1432, 1726
AflII	CTTAAG	1 cut(s)	397
AgsI	TTSAA	9 cut(s)	236, 478, 614, 1021, 1241, 1543, 1555, 1885, 1907
AjnI	CCWGG	2 cut(s)	409, 787
AleI	CACNNNNGTG	1 cut(s)	296
Alw26I	GTCTC	4 cut(s)	1174, 1248, 1385, 1649
Ama87I	CYCGRG	2 cut(s)	762, 1509
AoxI	GGCC	8 cut(s)	16, 119, 183, 745, 755, 1207, 1717, 1791
ApaI	GGGCCC	1 cut(s)	123
ApeKI	GCWGC	3 cut(s)	128, 458, 1304
ApoI	RAATTY	2 cut(s)	270, 478
Asp700I	GAANNNNTTC	2 cut(s)	646, 1338
AspLEI	GCGC	4 cut(s)	150, 263, 317, 1674
AspS9I	GGNCC	5 cut(s)	119, 120, 782, 1443, 1876
AsuC2I	CCSGG	1 cut(s)	123
AsuHPI	GGTGA	6 cut(s)	697, 1150, 1336, 1343, 1574, 1718
AsuNHI	GCTAGC	1 cut(s)	284
AvaI	CYCGRG	2 cut(s)	762, 1509
AvaII	GGWCC	3 cut(s)	782, 1443, 1876
BaeGI	GKGCMC	1 cut(s)	123
BalI	TGGCCA	1 cut(s)	185
BanI	GGYRCC	2 cut(s)	298, 1626
BanII	GRGCYC	1 cut(s)	123
BarI	GAAGNNNNNNTAC	2 cut(s)	1133, 1165
BauI	CACGAG	1 cut(s)	902
BbsI	GAAGAC	2 cut(s)	34, 243
BbvI	GCAGC	3 cut(s)	115, 470, 1316
BccI	CCATC	6 cut(s)	694, 700, 949, 1040, 1355, 1597
BceAI	ACGGC	2 cut(s)	124, 227
BcgI	CGANNNNNNTGC	2 cut(s)	986, 1020
BciT130I	CCWGG	2 cut(s)	411, 789
BclI	TGATCA	2 cut(s)	1377, 1852
BcnI	CCSGG	1 cut(s)	123
BcoDI	GTCTC	4 cut(s)	1174, 1248, 1385, 1649
BfaI	CTAG	4 cut(s)	285, 1073, 1112, 1176
BfmI	CTRYAG	1 cut(s)	456
BfoI	RGCGCY	2 cut(s)	264, 318
BfrI	CTTAAG	1 cut(s)	397
BfuAI	ACCTGC	2 cut(s)	581, 1180
BglII	AGATCT	2 cut(s)	1165, 1234
BisI	GCNGC	5 cut(s)	129, 459, 1305, 1472, 1758
BlpI	GCTNAGC	1 cut(s)	1777
BlsI	GCNGC	5 cut(s)	130, 460, 1306, 1473, 1759
Bme1390I	CCNGG	3 cut(s)	123, 411, 789
Bme18I	GGWCC	3 cut(s)	782, 1443, 1876
BmeT110I	CYCGRG	2 cut(s)	762, 1509
BmgT120I	GGNCC	5 cut(s)	119, 120, 782, 1443, 1876
BmiI	GGNNCC	5 cut(s)	37, 121, 300, 1628, 1658
BmrFI	CCNGG	3 cut(s)	123, 411, 789
BmrI	ACTGGG	1 cut(s)	510
BmsI	GCATC	5 cut(s)	520, 869, 994, 1302, 1683
BmtI	GCTAGC	1 cut(s)	288
BmuI	ACTGGG	1 cut(s)	510
BpiI	GAAGAC	2 cut(s)	34, 243
BplI	GAGNNNNNCTC	2 cut(s)	745, 777
Bpu10I	CCTNAGC	1 cut(s)	813
Bpu1102I	GCTNAGC	1 cut(s)	1777
BpuEI	CTTGAG	4 cut(s)	149, 698, 1089, 1709
BpuMI	CCSGG	1 cut(s)	123
BsaBI	GATNNNNATC	1 cut(s)	710
BsaHI	GRCGYC	2 cut(s)	240, 406
BsaI	GGTCTC	1 cut(s)	1385
BsaJI	CCNNGG	4 cut(s)	102, 186, 201, 1699
BsaWI	WCCGGW	2 cut(s)	295, 1399
BsaXI	ACNNNNNCTCC	2 cut(s)	424, 454
Bsc4I	CCNNNNNNNGG	6 cut(s)	324, 764, 794, 1431, 1432, 1726
Bse1I	ACTGG	3 cut(s)	318, 516, 748
Bse3DI	GCAATG	1 cut(s)	1314
Bse8I	GATNNNNATC	1 cut(s)	710
BseBI	CCWGG	2 cut(s)	411, 789
BseDI	CCNNGG	4 cut(s)	102, 186, 201, 1699
BseGI	GGATG	3 cut(s)	511, 964, 1816
BseJI	GATNNNNATC	1 cut(s)	710
BseLI	CCNNNNNNNGG	6 cut(s)	324, 764, 794, 1431, 1432, 1726
BseMI	GCAATG	1 cut(s)	1314
BseMII	CTCAG	2 cut(s)	1613, 1737
BseNI	ACTGG	3 cut(s)	318, 516, 748
BseRI	GAGGAG	5 cut(s)	46, 49, 52, 55, 553
BseSI	GKGCMC	1 cut(s)	123
BseXI	GCAGC	3 cut(s)	115, 470, 1316
BseYI	CCCAGC	2 cut(s)	116, 1474
BsgI	GTGCAG	2 cut(s)	429, 609
Bsh1236I	CGCG	2 cut(s)	150, 1760
BshFI	GGCC	8 cut(s)	18, 121, 185, 747, 757, 1209, 1719, 1793
BshNI	GGYRCC	2 cut(s)	298, 1626
BsiHKCI	CYCGRG	2 cut(s)	762, 1509
BsiSI	CCGG	3 cut(s)	123, 296, 1400
BslFI	GGGAC	1 cut(s)	1838
BslI	CCNNNNNNNGG	6 cut(s)	324, 764, 794, 1431, 1432, 1726
BsmAI	GTCTC	4 cut(s)	1174, 1248, 1385, 1649
BsmBI	CGTCTC	1 cut(s)	1649
BsmFI	GGGAC	1 cut(s)	1838
BsnI	GGCC	8 cut(s)	18, 121, 185, 747, 757, 1209, 1719, 1793
Bso31I	GGTCTC	1 cut(s)	1385
BsoBI	CYCGRG	2 cut(s)	762, 1509
Bsp120I	GGGCCC	1 cut(s)	119
Bsp1286I	GDGCHC	1 cut(s)	123
Bsp143I	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
Bsp1720I	GCTNAGC	1 cut(s)	1777
Bsp19I	CCATGG	2 cut(s)	102, 1699
BspANI	GGCC	8 cut(s)	18, 121, 185, 747, 757, 1209, 1719, 1793
BspCNI	CTCAG	2 cut(s)	1614, 1738
BspFNI	CGCG	2 cut(s)	150, 1760
BspHI	TCATGA	2 cut(s)	1801, 1855
BspLI	GGNNCC	5 cut(s)	37, 121, 300, 1628, 1658
BspMAI	CTGCAG	1 cut(s)	460
BspMI	ACCTGC	2 cut(s)	581, 1180
BspOI	GCTAGC	1 cut(s)	288
BspT107I	GGYRCC	2 cut(s)	298, 1626
BspTI	CTTAAG	1 cut(s)	397
BspTNI	GGTCTC	1 cut(s)	1385
BsrBI	CCGCTC	1 cut(s)	325
BsrDI	GCAATG	1 cut(s)	1314
BsrI	ACTGG	3 cut(s)	318, 516, 748
BssECI	CCNNGG	4 cut(s)	102, 186, 201, 1699
BssMI	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
BssNAI	GTATAC	1 cut(s)	1150
BssNI	GRCGYC	2 cut(s)	240, 406
BssSI	CACGAG	1 cut(s)	902
BssT1I	CCWWGG	4 cut(s)	102, 186, 201, 1699
Bst1107I	GTATAC	1 cut(s)	1150
Bst2BI	CACGAG	1 cut(s)	902
Bst2UI	CCWGG	2 cut(s)	411, 789
Bst4CI	ACNGT	1 cut(s)	436
Bst6I	CTCTTC	4 cut(s)	186, 724, 1136, 1589
BstACI	GRCGYC	2 cut(s)	240, 406
BstAFI	CTTAAG	1 cut(s)	397
BstC8I	GCNNGC	7 cut(s)	286, 527, 531, 759, 810, 990, 1009
BstDEI	CTNAG	7 cut(s)	723, 813, 1127, 1190, 1622, 1746, 1777
BstDSI	CCRYGG	2 cut(s)	102, 1699
BstF5I	GGATG	3 cut(s)	511, 964, 1816
BstFNI	CGCG	2 cut(s)	150, 1760
BstH2I	RGCGCY	2 cut(s)	264, 318
BstHHI	GCGC	4 cut(s)	150, 263, 317, 1674
BstKTI	GATC	9 cut(s)	198, 566, 1072, 1168, 1237, 1282, 1380, 1464, 1855
BstMAI	GTCTC	4 cut(s)	1174, 1248, 1385, 1649
BstMBI	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
BstMWI	GCNNNNNNNGC	1 cut(s)	212
BstNI	CCWGG	2 cut(s)	411, 789
BstNSI	RCATGY	1 cut(s)	529
BstSCI	CCNGG	3 cut(s)	121, 409, 787
BstSFI	CTRYAG	1 cut(s)	456
BstSLI	GKGCMC	1 cut(s)	123
BstUI	CGCG	2 cut(s)	150, 1760
BstV1I	GCAGC	3 cut(s)	115, 470, 1316
BstV2I	GAAGAC	2 cut(s)	34, 243
BstX2I	RGATCY	2 cut(s)	1165, 1234
BstYI	RGATCY	2 cut(s)	1165, 1234
BstZ17I	GTATAC	1 cut(s)	1150
BsuRI	GGCC	8 cut(s)	18, 121, 185, 747, 757, 1209, 1719, 1793
BtgI	CCRYGG	2 cut(s)	102, 1699
BtsCI	GGATG	3 cut(s)	511, 964, 1816
BtsIMutI	CAGTG	4 cut(s)	325, 741, 866, 1257
BveI	ACCTGC	2 cut(s)	581, 1180
Cac8I	GCNNGC	7 cut(s)	286, 527, 531, 759, 810, 990, 1009
CciI	TCATGA	2 cut(s)	1801, 1855
CfoI	GCGC	4 cut(s)	150, 263, 317, 1674
Cfr13I	GGNCC	5 cut(s)	119, 120, 782, 1443, 1876
CseI	GACGC	2 cut(s)	248, 1127
CsiI	ACCWGGT	1 cut(s)	787
Csp6I	GTAC	7 cut(s)	157, 172, 417, 519, 1573, 1693, 1734
CspCI	CAANNNNNGTGG	2 cut(s)	864, 899
CviQI	GTAC	7 cut(s)	157, 172, 417, 519, 1573, 1693, 1734
DdeI	CTNAG	7 cut(s)	723, 813, 1127, 1190, 1622, 1746, 1777
DpnI	GATC	9 cut(s)	197, 565, 1071, 1167, 1236, 1281, 1379, 1463, 1854
DpnII	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
EaeI	YGGCCR	1 cut(s)	183
Eam1104I	CTCTTC	4 cut(s)	186, 724, 1136, 1589
EarI	CTCTTC	4 cut(s)	186, 724, 1136, 1589
EciI	GGCGGA	2 cut(s)	88, 1403
Eco130I	CCWWGG	4 cut(s)	102, 186, 201, 1699
Eco147I	AGGCCT	1 cut(s)	18
Eco24I	GRGCYC	1 cut(s)	123
Eco31I	GGTCTC	1 cut(s)	1385
Eco32I	GATATC	1 cut(s)	357
Eco47I	GGWCC	3 cut(s)	782, 1443, 1876
Eco57I	CTGAAG	4 cut(s)	237, 810, 1281, 1613
Eco88I	CYCGRG	2 cut(s)	762, 1509
EcoRI	GAATTC	1 cut(s)	478
EcoRII	CCWGG	2 cut(s)	409, 787
EcoRV	GATATC	1 cut(s)	357
EcoT14I	CCWWGG	4 cut(s)	102, 186, 201, 1699
EcoT38I	GRGCYC	1 cut(s)	123
ErhI	CCWWGG	4 cut(s)	102, 186, 201, 1699
Esp3I	CGTCTC	1 cut(s)	1649
FalI	AAGNNNNNCTT	2 cut(s)	158, 190
FaqI	GGGAC	1 cut(s)	1838
FauI	CCCGC	2 cut(s)	318, 1488
FbaI	TGATCA	2 cut(s)	1377, 1852
FblI	GTMKAC	3 cut(s)	403, 1149, 1500
Fnu4HI	GCNGC	5 cut(s)	129, 459, 1305, 1472, 1758
FokI	GGATG	3 cut(s)	498, 971, 1823
FriOI	GRGCYC	1 cut(s)	123
Fsp4HI	GCNGC	5 cut(s)	129, 459, 1305, 1472, 1758
FspBI	CTAG	4 cut(s)	285, 1073, 1112, 1176
GlaI	GCGC	4 cut(s)	149, 262, 316, 1673
GluI	GCNGC	5 cut(s)	129, 459, 1305, 1472, 1758
GsaI	CCCAGC	2 cut(s)	120, 1478
HaeII	RGCGCY	2 cut(s)	264, 318
HaeIII	GGCC	8 cut(s)	18, 121, 185, 747, 757, 1209, 1719, 1793
HapII	CCGG	3 cut(s)	123, 296, 1400
HgaI	GACGC	2 cut(s)	248, 1127
HhaI	GCGC	4 cut(s)	150, 263, 317, 1674
Hin1I	GRCGYC	2 cut(s)	240, 406
Hin6I	GCGC	4 cut(s)	148, 261, 315, 1672
HinP1I	GCGC	4 cut(s)	148, 261, 315, 1672
HincII	GTYRAC	1 cut(s)	981
HindII	GTYRAC	1 cut(s)	981
HindIII	AAGCTT	1 cut(s)	1785
HpaII	CCGG	3 cut(s)	123, 296, 1400
HphI	GGTGA	6 cut(s)	697, 1150, 1336, 1343, 1574, 1718
Hpy166II	GTNNAC	6 cut(s)	404, 741, 785, 981, 1150, 1501
Hpy8I	GTNNAC	6 cut(s)	404, 741, 785, 981, 1150, 1501
Hpy99I	CGWCG	2 cut(s)	1508, 1535
HpyAV	CCTTC	9 cut(s)	312, 325, 657, 676, 758, 1008, 1256, 1537, 1801
HpyCH4III	ACNGT	1 cut(s)	436
HpyCH4IV	ACGT	5 cut(s)	406, 419, 473, 1503, 1530
HpyCH4V	TGCA	9 cut(s)	248, 446, 458, 511, 577, 590, 860, 1007, 1250
HpyF10VI	GCNNNNNNNGC	1 cut(s)	212
HpyF3I	CTNAG	7 cut(s)	723, 813, 1127, 1190, 1622, 1746, 1777
HpySE526I	ACGT	5 cut(s)	406, 419, 473, 1503, 1530
Hsp92I	GRCGYC	2 cut(s)	240, 406
HspAI	GCGC	4 cut(s)	148, 261, 315, 1672
Ksp22I	TGATCA	2 cut(s)	1377, 1852
Kzo9I	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
LmnI	GCTCC	4 cut(s)	41, 125, 293, 445
Lsp1109I	GCAGC	3 cut(s)	115, 470, 1316
LweI	GCATC	5 cut(s)	520, 869, 994, 1302, 1683
MabI	ACCWGGT	1 cut(s)	787
MaeI	CTAG	4 cut(s)	285, 1073, 1112, 1176
MaeII	ACGT	5 cut(s)	406, 419, 473, 1503, 1530
MaeIII	GTNAC	4 cut(s)	136, 387, 1051, 1193
MalI	GATC	9 cut(s)	197, 565, 1071, 1167, 1236, 1281, 1379, 1463, 1854
MbiI	CCGCTC	1 cut(s)	325
MboI	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
MflI	RGATCY	2 cut(s)	1165, 1234
MhlI	GDGCHC	1 cut(s)	123
MlsI	TGGCCA	1 cut(s)	185
MluCI	AATT	7 cut(s)	91, 270, 478, 948, 1035, 1077, 1317
MluNI	TGGCCA	1 cut(s)	185
MlyI	GAGTC	4 cut(s)	20, 499, 550, 1627
Mox20I	TGGCCA	1 cut(s)	185
MroXI	GAANNNNTTC	2 cut(s)	646, 1338
MscI	TGGCCA	1 cut(s)	185
MseI	TTAA	4 cut(s)	398, 654, 849, 1448
MslI	CAYNNNNRTG	4 cut(s)	296, 877, 1665, 1704
Msp20I	TGGCCA	1 cut(s)	185
MspA1I	CMGCKG	2 cut(s)	1474, 1591
MspCI	CTTAAG	1 cut(s)	397
MspI	CCGG	3 cut(s)	123, 296, 1400
MspR9I	CCNGG	3 cut(s)	123, 411, 789
MvaI	CCWGG	2 cut(s)	411, 789
MvnI	CGCG	2 cut(s)	150, 1760
MwoI	GCNNNNNNNGC	1 cut(s)	212
NciI	CCSGG	1 cut(s)	123
NcoI	CCATGG	2 cut(s)	102, 1699
NdeII	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
NheI	GCTAGC	1 cut(s)	284
NlaIV	GGNNCC	5 cut(s)	37, 121, 300, 1628, 1658
NmuCI	GTSAC	3 cut(s)	136, 1051, 1193
NspI	RCATGY	1 cut(s)	529
OliI	CACNNNNGTG	1 cut(s)	296
PaeI	GCATGC	1 cut(s)	529
PaeR7I	CTCGAG	1 cut(s)	762
PagI	TCATGA	2 cut(s)	1801, 1855
PceI	AGGCCT	1 cut(s)	18
PdmI	GAANNNNTTC	2 cut(s)	646, 1338
PfeI	GAWTC	7 cut(s)	50, 581, 830, 1609, 1684, 1816, 1915
PkrI	GCNGC	5 cut(s)	130, 460, 1306, 1473, 1759
PleI	GAGTC	4 cut(s)	20, 499, 549, 1626
PpsI	GAGTC	4 cut(s)	20, 499, 549, 1626
Psp1406I	AACGTT	1 cut(s)	473
Psp6I	CCWGG	2 cut(s)	409, 787
PspFI	CCCAGC	2 cut(s)	116, 1474
PspGI	CCWGG	2 cut(s)	409, 787
PspN4I	GGNNCC	5 cut(s)	37, 121, 300, 1628, 1658
PspOMI	GGGCCC	1 cut(s)	119
PspPI	GGNCC	5 cut(s)	119, 120, 782, 1443, 1876
PspXI	VCTCGAGB	1 cut(s)	762
PstI	CTGCAG	1 cut(s)	460
PsuI	RGATCY	2 cut(s)	1165, 1234
PvuII	CAGCTG	1 cut(s)	1591
RsaI	GTAC	7 cut(s)	158, 173, 418, 520, 1574, 1694, 1735
RsaNI	GTAC	7 cut(s)	157, 172, 417, 519, 1573, 1693, 1734
RseI	CAYNNNNRTG	4 cut(s)	296, 877, 1665, 1704
SaqAI	TTAA	4 cut(s)	398, 654, 849, 1448
SatI	GCNGC	5 cut(s)	129, 459, 1305, 1472, 1758
Sau3AI	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
Sau96I	GGNCC	5 cut(s)	119, 120, 782, 1443, 1876
SchI	GAGTC	4 cut(s)	20, 499, 550, 1627
ScrFI	CCNGG	3 cut(s)	123, 411, 789
SduI	GDGCHC	1 cut(s)	123
SexAI	ACCWGGT	1 cut(s)	787
SfaNI	GCATC	5 cut(s)	520, 869, 994, 1302, 1683
SfcI	CTRYAG	1 cut(s)	456
Sfr274I	CTCGAG	1 cut(s)	762
SinI	GGWCC	3 cut(s)	782, 1443, 1876
SlaI	CTCGAG	1 cut(s)	762
SmiMI	CAYNNNNRTG	4 cut(s)	296, 877, 1665, 1704
SmlI	CTYRAG	6 cut(s)	164, 397, 677, 762, 1104, 1688
SmoI	CTYRAG	6 cut(s)	164, 397, 677, 762, 1104, 1688
SphI	GCATGC	1 cut(s)	529
Sse9I	AATT	7 cut(s)	91, 270, 478, 948, 1035, 1077, 1317
SseBI	AGGCCT	1 cut(s)	18
SspI	AATATT	1 cut(s)	556
SspMI	CTAG	4 cut(s)	285, 1073, 1112, 1176
StuI	AGGCCT	1 cut(s)	18
StyD4I	CCNGG	3 cut(s)	121, 409, 787
StyI	CCWWGG	4 cut(s)	102, 186, 201, 1699
TaaI	ACNGT	1 cut(s)	436
TaiI	ACGT	5 cut(s)	409, 422, 476, 1506, 1533
TaqI	TCGA	3 cut(s)	24, 763, 1458
TaqII	GACCGA	2 cut(s)	124, 1409
TasI	AATT	7 cut(s)	91, 270, 478, 948, 1035, 1077, 1317
TatI	WGTACW	2 cut(s)	518, 1572
TauI	GCSGC	2 cut(s)	1474, 1760
TfiI	GAWTC	7 cut(s)	50, 581, 830, 1609, 1684, 1816, 1915
Tru1I	TTAA	4 cut(s)	398, 654, 849, 1448
Tru9I	TTAA	4 cut(s)	398, 654, 849, 1448
TscAI	CASTG	4 cut(s)	325, 748, 873, 1264
TseFI	GTSAC	3 cut(s)	136, 1051, 1193
TseI	GCWGC	3 cut(s)	128, 458, 1304
Tsp45I	GTSAC	3 cut(s)	136, 1051, 1193
TspDTI	ATGAA	4 cut(s)	615, 907, 943, 1808
TspGWI	ACGGA	1 cut(s)	28
TspRI	CASTG	4 cut(s)	325, 748, 873, 1264
Vha464I	CTTAAG	1 cut(s)	397
VpaK11BI	GGWCC	3 cut(s)	782, 1443, 1876
XapI	RAATTY	2 cut(s)	270, 478
XceI	RCATGY	1 cut(s)	529
XhoI	CTCGAG	1 cut(s)	762
XmiI	GTMKAC	3 cut(s)	403, 1149, 1500
XmnI	GAANNNNTTC	2 cut(s)	646, 1338
XspI	CTAG	4 cut(s)	285, 1073, 1112, 1176
ZraI	GACGTC	1 cut(s)	407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.