Rmu_sc0006629.1_g000002

Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic 2Fe-2S and 4Fe-4S proteins

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006629.1
Physical Location & Seq
Forward (+)
24149 .. 26837
2689 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006629.1_g000002.1.cds

Sequence Viewer

Length: 1332 bp
atgaatagcagtgggttgtctgagaagaggcgcggtctgggaaagaaggctgggttttcaaccttgggttggacagacggatcccgttctgtccctctcggattggagatgaaggcagttgtggaacaacgactcaatggccctctccggtggtgggatctaacgccaccattctggcgttctgtgatgcggcggacgagatcgaatcgaggccagcatcggttgcggttttggatctggttgtggtctgatgcaggtggtcggatctgtctgctacgtggccaagaggcgcagtggcgtagggatgctgggcgtggcgtggtggtgcgtggcagcagagctcgctggcggtgggaaggactgtctggggcgtttgctctctggtggggaaaagggtgtttgggctgggcttcttttcatgggcctcaattgggttgggtgtttctgggtagggtcgatgccattgttatggtgtcatggtctggtcttttgtcagtgttttttggttatcaacgtgatggtgaatcaccctcacacgtggcttggcggttttgggttgcggtgtccgaactggtgaaaacagttcatcttaatgttggtggctgggttgtatcggtacaggtttggttggtactcattgtaactcgcgggagccatctccaccgtccacgtacccccaacccgccaaaccgcccttctccgtctcaatccctaatattcatcactatccccaccagagcttcctctcctgtccttcacaaaatcgaatcacctgaaacgtttcgcgaacaaagaagaaaagaagaaagaagaaacccaacaatgttgaggctggtatcgaagaggctgctccaagggtcccgcgaggcccagctgcctgcggccctgactctgccgcgtctctaccacgagagggtggtcgaccactacgacaacccccgcaacgtcggctccttcgacaaaaacgacccctccgtcggcaccggactcgtcggcgcacccgcctgcggtgacgtcatgaagctccagattaaggtcggcgacgatggcaagattactgacgccgtcttcaagacctttggctgtggatccgccatcgcctcctcttccgtcgctactgaatgggtgaaggggaagcaaatggaggaggtcctgactattaagaacacggaaattgcgaaacatctctctcttcctccagtcaagctacactgcagcatgcttgctgaggatgccatcaaggcagctgttaaagactatcaaacaaagctggctaaatcatcaaatggcagctcagaggcctcacctgtggagaaggctgctaatgcttga

Protein Analysis

443

Amino Acids

49.42

Weight (kDa)

10.41

Isoelectric Point (pI)

52.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 245
AasI GACNNNNNNGTC 1 cut(s) 974
AatII GACGTC 1 cut(s) 1017
Acc36I ACCTGC 1 cut(s) 245
AccB1I GGYRCC 1 cut(s) 980
AccI GTMKAC 1 cut(s) 921
AccII CGCG 5 cut(s) 33, 648, 786, 864, 898
AclI AACGTT 1 cut(s) 779
AclWI GGATC 7 cut(s) 75, 88, 165, 242, 272, 1083, 1096
AcoI YGGCCR 1 cut(s) 280
AcvI CACGTG 1 cut(s) 538
AcyI GRCGYC 2 cut(s) 1014, 1062
AfaI GTAC 3 cut(s) 618, 633, 673
AfiI CCNNNNNNNGG 7 cut(s) 69, 154, 431, 913, 977, 1007, 1033
AflIII ACRYGT 1 cut(s) 535
AgsI TTSAA 2 cut(s) 60, 1072
AjuI GAANNNNNNNTTGG 2 cut(s) 679, 711
AluBI AGCT 8 cut(s) 341, 740, 874, 1024, 1207, 1247, 1270, 1293
AluI AGCT 8 cut(s) 341, 740, 874, 1024, 1207, 1247, 1270, 1293
Alw21I GWGCWC 1 cut(s) 343
Alw26I GTCTC 2 cut(s) 708, 905
AlwI GGATC 7 cut(s) 75, 88, 165, 242, 272, 1083, 1096
AoxI GGCC 7 cut(s) 139, 211, 280, 422, 867, 882, 1299
ApeKI GCWGC 7 cut(s) 333, 847, 874, 1215, 1244, 1290, 1319
Asp700I GAANNNNTTC 1 cut(s) 780
AspLEI GCGC 3 cut(s) 33, 292, 998
AspS9I GGNCC 6 cut(s) 140, 422, 858, 868, 883, 1150
AsuHPI GGTGA 7 cut(s) 519, 533, 586, 762, 1022, 1138, 1296
AvaII GGWCC 2 cut(s) 858, 1150
BalI TGGCCA 1 cut(s) 282
BamHI GGATCC 2 cut(s) 80, 1088
BanI GGYRCC 1 cut(s) 980
BanII GRGCYC 1 cut(s) 343
BauI CACGAG 1 cut(s) 908
BbrPI CACGTG 1 cut(s) 538
BbsI GAAGAC 1 cut(s) 1060
Bbv12I GWGCWC 1 cut(s) 343
BbvCI CCTCAGC 1 cut(s) 1227
BbvI GCAGC 7 cut(s) 345, 834, 861, 1227, 1256, 1302, 1306
BccI CCATC 5 cut(s) 512, 663, 1040, 1103, 1244
BceAI ACGGC 1 cut(s) 1049
BcgI CGANNNNNNTGC 4 cut(s) 829, 863, 970, 1004
BcoDI GTCTC 2 cut(s) 708, 905
BfmI CTRYAG 1 cut(s) 1213
BfuAI ACCTGC 1 cut(s) 245
BglI GCCNNNNNGGC 1 cut(s) 1241
Bme18I GGWCC 2 cut(s) 858, 1150
BmgT120I GGNCC 6 cut(s) 140, 422, 858, 868, 883, 1150
BmiI GGNNCC 7 cut(s) 82, 653, 859, 860, 952, 982, 1090
BmsI GCATC 6 cut(s) 177, 226, 241, 295, 448, 1222
BpiI GAAGAC 1 cut(s) 1060
BpmI CTGGAG 2 cut(s) 1010, 1182
Bpu10I CCTNAGC 1 cut(s) 1227
BsaAI YACGTR 3 cut(s) 278, 538, 671
BsaHI GRCGYC 2 cut(s) 1014, 1062
BsaJI CCNNGG 2 cut(s) 63, 853
BsaWI WCCGGW 2 cut(s) 147, 983
BsaXI ACNNNNNCTCC 4 cut(s) 935, 956, 965, 986
Bsc4I CCNNNNNNNGG 7 cut(s) 69, 154, 431, 913, 977, 1007, 1033
Bse1I ACTGG 2 cut(s) 576, 1199
BseDI CCNNGG 2 cut(s) 63, 853
BseGI GGATG 2 cut(s) 310, 1237
BseLI CCNNNNNNNGG 7 cut(s) 69, 154, 431, 913, 977, 1007, 1033
BseMII CTCAG 3 cut(s) 12, 1218, 1308
BseNI ACTGG 2 cut(s) 576, 1199
BseRI GAGGAG 2 cut(s) 1093, 1160
BseXI GCAGC 7 cut(s) 345, 834, 861, 1227, 1256, 1302, 1306
BseYI CCCAGC 5 cut(s) 50, 308, 405, 603, 870
Bsh1236I CGCG 5 cut(s) 33, 648, 786, 864, 898
BshFI GGCC 7 cut(s) 141, 213, 282, 424, 869, 884, 1301
BshNI GGYRCC 1 cut(s) 980
BsiHKAI GWGCWC 1 cut(s) 343
BsiSI CCGG 2 cut(s) 148, 984
BslFI GGGAC 2 cut(s) 77, 844
BslI CCNNNNNNNGG 7 cut(s) 69, 154, 431, 913, 977, 1007, 1033
BsmAI GTCTC 2 cut(s) 708, 905
BsmBI CGTCTC 2 cut(s) 708, 905
BsmFI GGGAC 2 cut(s) 77, 844
BsnI GGCC 7 cut(s) 141, 213, 282, 424, 869, 884, 1301
Bsp1286I GDGCHC 1 cut(s) 343
Bsp143I GATC 6 cut(s) 80, 157, 200, 234, 264, 1088
Bsp68I TCGCGA 1 cut(s) 786
BspANI GGCC 7 cut(s) 141, 213, 282, 424, 869, 884, 1301
BspCNI CTCAG 3 cut(s) 13, 1219, 1307
BspFNI CGCG 5 cut(s) 33, 648, 786, 864, 898
BspHI TCATGA 1 cut(s) 1017
BspLI GGNNCC 7 cut(s) 82, 653, 859, 860, 952, 982, 1090
BspMAI CTGCAG 1 cut(s) 1217
BspMI ACCTGC 1 cut(s) 245
BspPI GGATC 7 cut(s) 75, 88, 165, 242, 272, 1083, 1096
BspT107I GGYRCC 1 cut(s) 980
BsrI ACTGG 2 cut(s) 576, 1199
BssECI CCNNGG 2 cut(s) 63, 853
BssMI GATC 6 cut(s) 80, 157, 200, 234, 264, 1088
BssNI GRCGYC 2 cut(s) 1014, 1062
BssSI CACGAG 1 cut(s) 908
BssT1I CCWWGG 2 cut(s) 63, 853
Bst2BI CACGAG 1 cut(s) 908
Bst4CI ACNGT 3 cut(s) 363, 583, 665
Bst6I CTCTTC 4 cut(s) 20, 836, 1111, 1197
BstACI GRCGYC 2 cut(s) 1014, 1062
BstAPI GCANNNNNTGC 1 cut(s) 223
BstBAI YACGTR 3 cut(s) 278, 538, 671
BstC8I GCNNGC 8 cut(s) 215, 343, 347, 879, 1006, 1220, 1224, 1272
BstDEI CTNAG 3 cut(s) 21, 1227, 1294
BstF5I GGATG 2 cut(s) 310, 1237
BstFNI CGCG 5 cut(s) 33, 648, 786, 864, 898
BstHHI GCGC 3 cut(s) 33, 292, 998
BstKTI GATC 6 cut(s) 83, 160, 203, 237, 267, 1091
BstMAI GTCTC 2 cut(s) 708, 905
BstMBI GATC 6 cut(s) 80, 157, 200, 234, 264, 1088
BstMWI GCNNNNNNNGC 7 cut(s) 223, 342, 948, 1047, 1232, 1241, 1325
BstNSI RCATGY 1 cut(s) 1222
BstSFI CTRYAG 1 cut(s) 1213
BstUI CGCG 5 cut(s) 33, 648, 786, 864, 898
BstV1I GCAGC 7 cut(s) 345, 834, 861, 1227, 1256, 1302, 1306
BstV2I GAAGAC 1 cut(s) 1060
BstX2I RGATCY 5 cut(s) 80, 157, 234, 264, 1088
BstXI CCANNNNNNTGG 2 cut(s) 174, 469
BstYI RGATCY 5 cut(s) 80, 157, 234, 264, 1088
BsuRI GGCC 7 cut(s) 141, 213, 282, 424, 869, 884, 1301
BtgZI GCGATG 1 cut(s) 1081
BtsCI GGATG 2 cut(s) 310, 1237
BtsI GCAGTG 3 cut(s) 16, 299, 1210
BtsIMutI CAGTG 4 cut(s) 16, 299, 501, 1210
BtuMI TCGCGA 1 cut(s) 786
BveI ACCTGC 1 cut(s) 245
Cac8I GCNNGC 8 cut(s) 215, 343, 347, 879, 1006, 1220, 1224, 1272
CciI TCATGA 1 cut(s) 1017
CfoI GCGC 3 cut(s) 33, 292, 998
Cfr13I GGNCC 6 cut(s) 140, 422, 858, 868, 883, 1150
CseI GACGC 2 cut(s) 887, 1070
Csp6I GTAC 3 cut(s) 617, 632, 672
CviAII CATG 4 cut(s) 419, 477, 1018, 1219
CviQI GTAC 3 cut(s) 617, 632, 672
DdeI CTNAG 3 cut(s) 21, 1227, 1294
DpnI GATC 6 cut(s) 82, 159, 202, 236, 266, 1090
DpnII GATC 6 cut(s) 80, 157, 200, 234, 264, 1088
DrdI GACNNNNNNGTC 1 cut(s) 974
DseDI GACNNNNNNGTC 1 cut(s) 974
EaeI YGGCCR 1 cut(s) 280
Eam1104I CTCTTC 4 cut(s) 20, 836, 1111, 1197
EarI CTCTTC 4 cut(s) 20, 836, 1111, 1197
EciI GGCGGA 2 cut(s) 208, 1081
Ecl136II GAGCTC 1 cut(s) 341
Eco130I CCWWGG 2 cut(s) 63, 853
Eco147I AGGCCT 1 cut(s) 1301
Eco24I GRGCYC 1 cut(s) 343
Eco47I GGWCC 2 cut(s) 858, 1150
Eco53kI GAGCTC 1 cut(s) 341
Eco72I CACGTG 1 cut(s) 538
EcoICRI GAGCTC 1 cut(s) 341
EcoO109I RGGNCCY 2 cut(s) 858, 1150
EcoT14I CCWWGG 2 cut(s) 63, 853
EcoT38I GRGCYC 1 cut(s) 343
ErhI CCWWGG 2 cut(s) 63, 853
Esp3I CGTCTC 2 cut(s) 708, 905
FaeI CATG 4 cut(s) 422, 480, 1021, 1222
FaiI YATR 5 cut(s) 420, 470, 478, 1019, 1220
FaqI GGGAC 2 cut(s) 77, 844
FatI CATG 4 cut(s) 418, 476, 1017, 1218
FauI CCCGC 5 cut(s) 641, 690, 869, 947, 1009
FblI GTMKAC 1 cut(s) 921
FokI GGATG 2 cut(s) 317, 1244
FriOI GRGCYC 1 cut(s) 343
GlaI GCGC 3 cut(s) 32, 291, 997
GsaI CCCAGC 5 cut(s) 54, 312, 409, 607, 874
GsuI CTGGAG 2 cut(s) 1010, 1182
HaeIII GGCC 7 cut(s) 141, 213, 282, 424, 869, 884, 1301
HapII CCGG 2 cut(s) 148, 984
HgaI GACGC 2 cut(s) 887, 1070
HhaI GCGC 3 cut(s) 33, 292, 998
Hin1I GRCGYC 2 cut(s) 1014, 1062
Hin1II CATG 4 cut(s) 422, 480, 1021, 1222
Hin6I GCGC 3 cut(s) 31, 290, 996
HinP1I GCGC 3 cut(s) 31, 290, 996
HincII GTYRAC 1 cut(s) 922
HindII GTYRAC 1 cut(s) 922
HinfI GANTC 6 cut(s) 132, 205, 524, 767, 889, 987
HpaII CCGG 2 cut(s) 148, 984
HphI GGTGA 7 cut(s) 519, 533, 586, 762, 1022, 1138, 1296
Hpy166II GTNNAC 2 cut(s) 668, 922
Hpy188I TCNGA 6 cut(s) 22, 101, 250, 264, 568, 1297
Hpy188III TCNNGA 5 cut(s) 785, 1018, 1027, 1072, 1153
Hpy8I GTNNAC 2 cut(s) 668, 922
Hpy99I CGWCG 5 cut(s) 950, 980, 995, 1046, 1115
HpyAV CCTTC 8 cut(s) 40, 106, 350, 705, 764, 964, 1123, 1309
HpyCH4III ACNGT 3 cut(s) 363, 583, 665
HpyCH4IV ACGT 7 cut(s) 277, 514, 537, 670, 779, 945, 1014
HpyCH4V TGCA 2 cut(s) 254, 1215
HpyF10VI GCNNNNNNNGC 7 cut(s) 223, 342, 948, 1047, 1232, 1241, 1325
HpyF3I CTNAG 3 cut(s) 21, 1227, 1294
HpySE526I ACGT 7 cut(s) 277, 514, 537, 670, 779, 945, 1014
Hsp92I GRCGYC 2 cut(s) 1014, 1062
Hsp92II CATG 4 cut(s) 422, 480, 1021, 1222
HspAI GCGC 3 cut(s) 31, 290, 996
KflI GGGWCCC 1 cut(s) 858
Kzo9I GATC 6 cut(s) 80, 157, 200, 234, 264, 1088
LmnI GCTCC 4 cut(s) 651, 855, 956, 1029
Lsp1109I GCAGC 7 cut(s) 345, 834, 861, 1227, 1256, 1302, 1306
LweI GCATC 6 cut(s) 177, 226, 241, 295, 448, 1222
MaeII ACGT 7 cut(s) 277, 514, 537, 670, 779, 945, 1014
MaeIII GTNAC 2 cut(s) 640, 1010
MalI GATC 6 cut(s) 82, 159, 202, 236, 266, 1090
MboI GATC 6 cut(s) 80, 157, 200, 234, 264, 1088
MboII GAAGA 8 cut(s) 37, 807, 815, 822, 853, 1060, 1098, 1184
MfeI CAATTG 1 cut(s) 428
MflI RGATCY 5 cut(s) 80, 157, 234, 264, 1088
MhlI GDGCHC 1 cut(s) 343
MlsI TGGCCA 1 cut(s) 282
MluCI AATT 2 cut(s) 428, 1173
MluNI TGGCCA 1 cut(s) 282
MlyI GAGTC 3 cut(s) 126, 883, 981
MmeI TCCRAC 2 cut(s) 50, 242
Mox20I TGGCCA 1 cut(s) 282
MroXI GAANNNNTTC 1 cut(s) 780
MscI TGGCCA 1 cut(s) 282
MseI TTAA 4 cut(s) 591, 1032, 1161, 1251
MslI CAYNNNNRTG 2 cut(s) 467, 591
Msp20I TGGCCA 1 cut(s) 282
MspA1I CMGCKG 2 cut(s) 874, 1247
MspI CCGG 2 cut(s) 148, 984
MunI CAATTG 1 cut(s) 428
MvnI CGCG 5 cut(s) 33, 648, 786, 864, 898
MwoI GCNNNNNNNGC 7 cut(s) 223, 342, 948, 1047, 1232, 1241, 1325
NdeII GATC 6 cut(s) 80, 157, 200, 234, 264, 1088
NlaIII CATG 4 cut(s) 422, 480, 1021, 1222
NlaIV GGNNCC 7 cut(s) 82, 653, 859, 860, 952, 982, 1090
NmuCI GTSAC 1 cut(s) 1010
NruI TCGCGA 1 cut(s) 786
NspI RCATGY 1 cut(s) 1222
PaeI GCATGC 1 cut(s) 1222
PagI TCATGA 1 cut(s) 1017
PaqCI CACCTGC 1 cut(s) 245
PceI AGGCCT 1 cut(s) 1301
PcsI WCGNNNNNNNCGW 5 cut(s) 927, 954, 963, 972, 1175
PdmI GAANNNNTTC 1 cut(s) 780
PfeI GAWTC 3 cut(s) 205, 524, 767
PflFI GACNNNGTC 1 cut(s) 1064
PleI GAGTC 3 cut(s) 126, 883, 981
PmaCI CACGTG 1 cut(s) 538
PmlI CACGTG 1 cut(s) 538
PpsI GAGTC 3 cut(s) 126, 883, 981
Ppu21I YACGTR 3 cut(s) 278, 538, 671
PpuMI RGGWCCY 2 cut(s) 858, 1150
Psp124BI GAGCTC 1 cut(s) 343
Psp1406I AACGTT 1 cut(s) 779
Psp5II RGGWCCY 2 cut(s) 858, 1150
PspCI CACGTG 1 cut(s) 538
PspFI CCCAGC 5 cut(s) 50, 308, 405, 603, 870
PspN4I GGNNCC 7 cut(s) 82, 653, 859, 860, 952, 982, 1090
PspPI GGNCC 6 cut(s) 140, 422, 858, 868, 883, 1150
PspPPI RGGWCCY 2 cut(s) 858, 1150
PstI CTGCAG 1 cut(s) 1217
PsuI RGATCY 5 cut(s) 80, 157, 234, 264, 1088
PsyI GACNNNGTC 1 cut(s) 1064
PvuII CAGCTG 2 cut(s) 874, 1247
RruI TCGCGA 1 cut(s) 786
RsaI GTAC 3 cut(s) 618, 633, 673
RsaNI GTAC 3 cut(s) 617, 632, 672
RseI CAYNNNNRTG 2 cut(s) 467, 591
SacI GAGCTC 1 cut(s) 343
SalI GTCGAC 1 cut(s) 920
SaqAI TTAA 4 cut(s) 591, 1032, 1161, 1251
Sau3AI GATC 6 cut(s) 80, 157, 200, 234, 264, 1088
Sau96I GGNCC 6 cut(s) 140, 422, 858, 868, 883, 1150
SchI GAGTC 3 cut(s) 126, 883, 981
SduI GDGCHC 1 cut(s) 343
SfaNI GCATC 6 cut(s) 177, 226, 241, 295, 448, 1222
SfcI CTRYAG 1 cut(s) 1213
SinI GGWCC 2 cut(s) 858, 1150
SmiMI CAYNNNNRTG 2 cut(s) 467, 591
SphI GCATGC 1 cut(s) 1222
Sse9I AATT 2 cut(s) 428, 1173
SseBI AGGCCT 1 cut(s) 1301
SspI AATATT 1 cut(s) 717
SstI GAGCTC 1 cut(s) 343
StuI AGGCCT 1 cut(s) 1301
StyI CCWWGG 2 cut(s) 63, 853
TaaI ACNGT 3 cut(s) 363, 583, 665
TaiI ACGT 7 cut(s) 280, 517, 540, 673, 782, 948, 1017
TaqI TCGA 7 cut(s) 203, 208, 456, 765, 839, 921, 957
TasI AATT 2 cut(s) 428, 1173
TauI GCSGC 3 cut(s) 193, 884, 898
TfiI GAWTC 3 cut(s) 205, 524, 767
Tru1I TTAA 4 cut(s) 591, 1032, 1161, 1251
Tru9I TTAA 4 cut(s) 591, 1032, 1161, 1251
TscAI CASTG 4 cut(s) 16, 299, 501, 1217
TseFI GTSAC 1 cut(s) 1010
TseI GCWGC 7 cut(s) 333, 847, 874, 1215, 1244, 1290, 1319
Tsp45I GTSAC 1 cut(s) 1010
TspDTI ATGAA 6 cut(s) 17, 125, 407, 575, 709, 1034
TspGWI ACGGA 5 cut(s) 93, 690, 964, 1099, 1184
TspRI CASTG 4 cut(s) 16, 299, 501, 1217
Tth111I GACNNNGTC 1 cut(s) 1064
VpaK11BI GGWCC 2 cut(s) 858, 1150
XceI RCATGY 1 cut(s) 1222
XmiI GTMKAC 1 cut(s) 921
XmnI GAANNNNTTC 1 cut(s) 780
ZraI GACGTC 1 cut(s) 1015
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.