Rmu_sc0006661.1_g000001

Ammonium transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006661.1
Physical Location & Seq
Reverse (-)
2 .. 1401
1400 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006661.1_g000001.1.cds

Sequence Viewer

Length: 476 bp
atggcttctcttctcttcctccaacctctcaccaatctctcttcctccaccaccctcgtctttctccgtaatccccaccacatccccacttcaacctcccttaaaccctccaacacccccaaacccctcacattcaaatccttcactacttccttctccctcgccgaatccgactcccccaaatctttacaacccgaaatccgacccgtcctccaagaactcgctgacagctttgatcttcctccggactactttgctaagctgcctaacgatcttcgtctcgacctgaatgacgctgcttttgacctttcaaatggaaagatcattgacgagtgtggtcaagagttgggggagacattgttaaatctctctcgtgcatgggaagtagctgacacatcaacgtcgcatagtttagctagcaagctccctgacttggaagaatctttgacagacaatgccaaatcaggcaataatag

Protein Analysis

158

Amino Acids

17.27

Weight (kDa)

4.63

Isoelectric Point (pI)

45.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 244
AfiI CCNNNNNNNGG 1 cut(s) 433
AgsI TTSAA 3 cut(s) 93, 136, 312
AluBI AGCT 5 cut(s) 231, 262, 389, 416, 424
AluI AGCT 5 cut(s) 231, 262, 389, 416, 424
Alw26I GTCTC 2 cut(s) 284, 347
Aor13HI TCCGGA 1 cut(s) 244
ApeKI GCWGC 2 cut(s) 262, 296
ArsI GACNNNNNNTTYG 2 cut(s) 284, 316
AsuHPI GGTGA 1 cut(s) 22
AsuNHI GCTAGC 1 cut(s) 416
BauI CACGAG 1 cut(s) 372
BbvI GCAGC 2 cut(s) 249, 283
BcoDI GTCTC 2 cut(s) 284, 347
BfaI CTAG 1 cut(s) 417
BisI GCNGC 2 cut(s) 263, 297
BlpI GCTNAGC 1 cut(s) 258
BlsI GCNGC 2 cut(s) 264, 298
BmtI GCTAGC 1 cut(s) 420
Bpu1102I GCTNAGC 1 cut(s) 258
BsaWI WCCGGW 1 cut(s) 244
BsaXI ACNNNNNCTCC 4 cut(s) 195, 225, 344, 374
Bsc4I CCNNNNNNNGG 1 cut(s) 433
BseAI TCCGGA 1 cut(s) 244
BseGI GGATG 1 cut(s) 81
BseLI CCNNNNNNNGG 1 cut(s) 433
BseXI GCAGC 2 cut(s) 249, 283
BsiSI CCGG 1 cut(s) 245
BslI CCNNNNNNNGG 1 cut(s) 433
BsmAI GTCTC 2 cut(s) 284, 347
BsmBI CGTCTC 1 cut(s) 284
Bsp13I TCCGGA 1 cut(s) 244
Bsp143I GATC 3 cut(s) 235, 271, 321
Bsp1720I GCTNAGC 1 cut(s) 258
BspEI TCCGGA 1 cut(s) 244
BspOI GCTAGC 1 cut(s) 420
BssMI GATC 3 cut(s) 235, 271, 321
BssSI CACGAG 1 cut(s) 372
Bst2BI CACGAG 1 cut(s) 372
Bst6I CTCTTC 3 cut(s) 15, 20, 46
BstC8I GCNNGC 2 cut(s) 418, 422
BstDEI CTNAG 1 cut(s) 258
BstF5I GGATG 1 cut(s) 81
BstKTI GATC 3 cut(s) 238, 274, 324
BstMAI GTCTC 2 cut(s) 284, 347
BstMBI GATC 3 cut(s) 235, 271, 321
BstV1I GCAGC 2 cut(s) 249, 283
BtsCI GGATG 1 cut(s) 81
Cac8I GCNNGC 2 cut(s) 418, 422
CseI GACGC 1 cut(s) 302
CviAII CATG 1 cut(s) 378
CviJI RGCY 6 cut(s) 5, 231, 262, 389, 416, 424
CviKI_1 RGCY 6 cut(s) 5, 231, 262, 389, 416, 424
DdeI CTNAG 1 cut(s) 258
DpnI GATC 3 cut(s) 237, 273, 323
DpnII GATC 3 cut(s) 235, 271, 321
Eam1104I CTCTTC 3 cut(s) 15, 20, 46
EarI CTCTTC 3 cut(s) 15, 20, 46
Esp3I CGTCTC 1 cut(s) 284
FaeI CATG 1 cut(s) 381
FaiI YATR 2 cut(s) 379, 408
FatI CATG 1 cut(s) 377
Fnu4HI GCNGC 2 cut(s) 263, 297
FokI GGATG 1 cut(s) 68
Fsp4HI GCNGC 2 cut(s) 263, 297
FspBI CTAG 1 cut(s) 417
GluI GCNGC 2 cut(s) 263, 297
HapII CCGG 1 cut(s) 245
HgaI GACGC 1 cut(s) 302
Hin1II CATG 1 cut(s) 381
HinfI GANTC 3 cut(s) 167, 173, 440
HpaII CCGG 1 cut(s) 245
HphI GGTGA 1 cut(s) 22
Hpy188I TCNGA 2 cut(s) 172, 203
Hpy188III TCNNGA 3 cut(s) 245, 281, 341
Hpy99I CGWCG 1 cut(s) 406
HpyAV CCTTC 2 cut(s) 151, 163
HpyCH4IV ACGT 1 cut(s) 401
HpyCH4V TGCA 1 cut(s) 377
HpyF3I CTNAG 1 cut(s) 258
HpySE526I ACGT 1 cut(s) 401
Hsp92II CATG 1 cut(s) 381
Kpn2I TCCGGA 1 cut(s) 244
Kzo9I GATC 3 cut(s) 235, 271, 321
LmnI GCTCC 1 cut(s) 429
LpnPI CCDG 4 cut(s) 258, 299, 441, 450
Lsp1109I GCAGC 2 cut(s) 249, 283
MaeI CTAG 1 cut(s) 417
MaeII ACGT 1 cut(s) 401
MalI GATC 3 cut(s) 237, 273, 323
MboI GATC 3 cut(s) 235, 271, 321
MboII GAAGA 5 cut(s) 7, 33, 230, 266, 449
MlyI GAGTC 1 cut(s) 167
MmeI TCCRAC 4 cut(s) 46, 135, 195, 226
MroI TCCGGA 1 cut(s) 244
MseI TTAA 2 cut(s) 102, 362
MspI CCGG 1 cut(s) 245
NdeII GATC 3 cut(s) 235, 271, 321
NheI GCTAGC 1 cut(s) 416
NlaIII CATG 1 cut(s) 381
PcsI WCGNNNNNNNCGW 1 cut(s) 168
PfeI GAWTC 2 cut(s) 167, 440
PkrI GCNGC 2 cut(s) 264, 298
PleI GAGTC 1 cut(s) 167
PpsI GAGTC 1 cut(s) 167
SaqAI TTAA 2 cut(s) 102, 362
SatI GCNGC 2 cut(s) 263, 297
Sau3AI GATC 3 cut(s) 235, 271, 321
SchI GAGTC 1 cut(s) 167
SspMI CTAG 1 cut(s) 417
TaiI ACGT 1 cut(s) 404
TaqI TCGA 1 cut(s) 282
TfiI GAWTC 2 cut(s) 167, 440
Tru1I TTAA 2 cut(s) 102, 362
Tru9I TTAA 2 cut(s) 102, 362
TseI GCWGC 2 cut(s) 262, 296
TspGWI ACGGA 1 cut(s) 56
XspI CTAG 1 cut(s) 417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.