Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011344.1

Orthogroup ID

OG0006265

Physical Location & Seq

Genomic Coordinates Forward (+)

958 .. 7467

Gene Structure 6510 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011344.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3045 bp

atgctagaggaatcctttccctgctcatatatcatggttgacaagcatccatttcgtcacgatccttctcatattgtaactcatagagtccacagtaacatttttgaatttgctgattatatcctaaaagctgaatttccccatctcagcaaggaatggagcacttatcttcaaatgataaatgcaatggttgaaagggagttgtcatttcaaatttctgctagacactccttgacagaaccgcaagtcgcatacctaatttcagaagcactttcagctgaatctgctcttttcattgggaacagtatggcaatacgtgatgcagatatgtatgggtgtggttggtcagagtatacacgtagtattgttgccatgaattataaactaccctgtcaaatgattcgggtggctgggaatagaggtgcaagtggtattgatgggttactcagtacagctgttggctttgctataggatgcaataaacgagtactttgcgtgattggggatgtttccttcctccatgatacaaatggcttagcaattgtgaaccagaggacgttccggaaaccaatgacaatagttgtgattaacaatcatggtggtgcaatattcagtctccttcctcttgcagatagagtcagaccaagaatactaaaccaatatttctacacctctcacaacatatcaatccgtgagctttgtgtagcacatggtgtgatgcatctacatgcgacgacaaagttggattttgaagaagcattattcacatctcaacatggagggatggattgtgtcattgaagttgagagctgcatagataccaatgccagctttcacagtactttaaaaacatttgcatgccaagcagcagatcaagtcataaagccttctagtcaagactcgatattagatggcactttactctgcagagtccatagaatggagtactcactgtttagaatgccactgtgtgctcctcatactatggtttctgttgaaggcggtaccaccagcttccacagggaagggtttattttaactttgtattttgaagatggaagctttgggcttggcgaggtttcacccctagacatctacaaagaaaaccttctagatgtagaagagcaactgaggtttctcatccatatgatgaaaggagctcatatcagttgcttccttcctctgctaaggggctcgttttcatcttggatatggtccaaccttggaatcctgccatgtacactctttcctagtgtgagatgtggtttggaaatggcaattctcaatgccatagcaaatagaaaaggttccaatttattaggaatactccatccccagatagttggagatatatttaaatcgtcgtcaacagttcagatttgtgcccttgttgattccagtgggacacccacacaagtagctgatgctattgctacacttgttgaagaaggatttactgcagtaaagattaaggatgctgcagttatacaagaagtaagaaaaaaagttggataccatattaaaattcgtgcagatgccaatcggaactggacctatgaagaagctatccagtttggttccttggtaaaggattgtgatctgcagtatatcgaggaacctgttcaaattgaagaagatattatcaagttttgcaaagaaagtgggttgcctgtggcactggatgaaactattgacaatattggagaacatccacttataaagctctcaaagtatgcccatccaggaatagtagctgttgtcatcaagccaagtgttgttggtggctttgaaaatgcagcaataattgcccaatgggcccagcagcaccagaaaatggctgttgttagtgctgcatttgaaagcagcctaggtttatcagcatatattcagttttcctgttatctcaaccagatgaattcagagatttgtacaatgatgaactatccattagcctcatccatagcccatggtttaggaacttaccgctggctaaaagaagatttgacgactactcctctcaagataaatcgtaatccacgtagtgggtttgtagaagcatctgttgctgattctgatcgagttctgcagcaatttcaaatcaatggaaacataattcatagaaaggttactggagagcaagtttgtatataccagttgcctttagattcaaagggtttatcttgctccatcaaaattcaggagattggacaaggatatgatgataatgtatttgtatttcttcatgggtttcttggaactggtgaagattggattgctatcatgaaggccttatcaggatgtggaagatgtgtttctattgaccttcctggtcatggtggaaccaagatactaggtcatggtgataaggatgctgtacaggcttcaggtttgagtgttgaggtagttgccgatcttttatgtaaagtgattgagcatattactcctgggaaggttacccttgtcggatattctatgggagccaggatcgccctttgcatggctctgaagcttaataaaaaagttaagggagctattatcatatctggcagccctggattaaatgatggaatggcaagaaaaattcgtagagctgaagatgactctagagcacgcttccttgttgcatatggcttaaagcactttctagacacctggtatgctggagagctttggaacagcttaagggaacatcctcactttcatcagatagccgccgaccgcctgcatcatggagatgtgcagagtcttgcaaaagttctgtctgctttaagtgttgggaggcagctgccattgtgggaagacttgaagcactgcaaaacgcctcttttgctcattgttggagagaaagataaaaaattcaagacaatagctcaggatatgttccttgcgattggtagtggcaatggcaaattgactggagatgatggcgcacccaacgacctttgtgagattgttgagatcccagattgtggacatgctgctcatctggaaaaccctctccctgtaatcagggcattaaggcaatttgtgacgaaactgaactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006732 GO:0006766 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009987 GO:0010109 GO:0019222 GO:0031323 GO:0042180 GO:0042181 GO:0042372 GO:0042374 GO:0042548 GO:0042550 GO:0043467 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0050789 GO:0050794 GO:0051186 GO:0051188 GO:0065007 GO:0071704 GO:1901576 GO:1901661 GO:1901663

KEGG Pathways

Metabolic & Signaling

ko00130 ko01100 ko01110 map00130 map01100 map01110

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 MR_MLE_C TPP_enzyme_C TPP_enzyme_M_2 TPP_enzyme_N

Protein Analysis

1014

Amino Acids

111.89

Weight (kDa)

6.29

Isoelectric Point (pI)

31.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006265)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68890 AT1G68890
fragaria_vesca	FvH4_4g28800 FvH4_4g28800 FvH4_4g28800 FvH4_4g28800 FvH4_4g28800
malus_domestica	MD13G1054200.v1.1 MD16G1052600.v1.1
prunus_persica	Prupe.1G298000_v2.0.a1 Prupe.1G298000_v2.0.a1 Prupe.1G298000_v2.0.a1 Prupe.1G298000_v2.0.a1
pyrus_communis	pycom16g04620
rosa_chinensis	RchiOBHm_Chr4g0436931 RchiOBHm_Chr4g0436941
rosa_laevigata	RLG00000006485
rosa_multiflora	Rmu_sc0011344.1_g000001 Rmu_ssc0000302.1_g000001 Rmu_ssc0000328.1_g000001
rosa_roxburghii	Rroxscaffold_5G00378000
rosa_rugosa	Rorug04G0297600
rosa_samantha	Rh4AG351800 Rh4BG360800 Rh4CG375100 Rh4DG355000
rosa_wichuraiana	Rw4G030790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	381, 1718
Acc65I	GGTACC	1 cut(s)	1004
AccB1I	GGYRCC	1 cut(s)	1004
AccB7I	CCANNNNNTGG	4 cut(s)	940, 1834, 2042, 2969
AccI	GTMKAC	1 cut(s)	353
AccIII	TCCGGA	1 cut(s)	561
AciI	CCGC	5 cut(s)	242, 1002, 1984, 2712, 2719
AclWI	GGATC	3 cut(s)	56, 2492, 2953
AcsI	RAATTY	8 cut(s)	107, 134, 213, 1524, 1915, 2193, 2580, 2855
AcuI	CTGAAG	3 cut(s)	2367, 2525, 2613
AdeI	CACNNNGTG	3 cut(s)	713, 971, 2042
AfaI	GTAC	8 cut(s)	451, 489, 841, 947, 1006, 1240, 1930, 2376
AfiI	CCNNNNNNNGG	6 cut(s)	940, 1834, 2042, 2333, 2497, 2969
AflII	CTTAAG	1 cut(s)	2680
AflIII	ACRYGT	1 cut(s)	356
AjnI	CCWGG	6 cut(s)	1741, 2326, 2443, 2480, 2551, 2651
Alw21I	GWGCWC	4 cut(s)	164, 976, 1162, 2611
Alw26I	GTCTC	1 cut(s)	620
AlwI	GGATC	3 cut(s)	56, 2492, 2953
Aor13HI	TCCGGA	1 cut(s)	561
AoxI	GGCC	2 cut(s)	1815, 2286
ApaI	GGGCCC	1 cut(s)	1819
ApoI	RAATTY	8 cut(s)	107, 134, 213, 1524, 1915, 2193, 2580, 2855
ArsI	GACNNNNNNTTYG	2 cut(s)	2744, 2776
Asp700I	GAANNNNTTC	4 cut(s)	15, 1107, 1306, 1620
Asp718I	GGTACC	1 cut(s)	1004
AspA2I	CCTAGG	1 cut(s)	1867
AspLEI	GCGC	1 cut(s)	2930
AspS9I	GGNCC	4 cut(s)	1215, 1551, 1815, 1816
AsuHPI	GGTGA	3 cut(s)	1074, 2273, 2372
AvaII	GGWCC	2 cut(s)	1215, 1551
AvrII	CCTAGG	1 cut(s)	1867
BaeGI	GKGCMC	2 cut(s)	1387, 1819
BanI	GGYRCC	1 cut(s)	1004
BanII	GRGCYC	3 cut(s)	1162, 1196, 1819
BbsI	GAAGAC	1 cut(s)	2805
Bbv12I	GWGCWC	4 cut(s)	164, 976, 1162, 2611
BcgI	CGANNNNNNTGC	4 cut(s)	35, 69, 474, 508
BciT130I	CCWGG	6 cut(s)	1743, 2328, 2445, 2482, 2553, 2653
BciVI	GTATCC	1 cut(s)	1505
BcoDI	GTCTC	1 cut(s)	620
BfmI	CTRYAG	6 cut(s)	468, 925, 1458, 1479, 1601, 2084
BfrI	CTTAAG	1 cut(s)	2680
BfuI	GTATCC	1 cut(s)	1505
BglI	GCCNNNNNGGC	1 cut(s)	1814
BlnI	CCTAGG	1 cut(s)	1867
BlpI	GCTNAGC	1 cut(s)	535
BmcAI	AGTACT	3 cut(s)	489, 841, 947
Bme1390I	CCNGG	6 cut(s)	1743, 2328, 2445, 2482, 2553, 2653
Bme18I	GGWCC	2 cut(s)	1215, 1551
BmgT120I	GGNCC	4 cut(s)	1215, 1551, 1815, 1816
BmiI	GGNNCC	7 cut(s)	1006, 1309, 1579, 1617, 1817, 2341, 2479
BmrFI	CCNGG	6 cut(s)	1743, 2328, 2445, 2482, 2553, 2653
BpiI	GAAGAC	1 cut(s)	2805
BpmI	CTGGAG	3 cut(s)	2151, 2682, 2937
Bpu10I	CCTNAGC	2 cut(s)	1187, 2871
Bpu1102I	GCTNAGC	1 cut(s)	535
BpuEI	CTTGAG	1 cut(s)	2003
BsaAI	YACGTR	3 cut(s)	317, 359, 2039
BsaBI	GATNNNNATC	4 cut(s)	1539, 1596, 2073, 2276
BsaJI	CCNNGG	6 cut(s)	1222, 1581, 1867, 1966, 2444, 2551
BsaWI	WCCGGW	1 cut(s)	561
BsaXI	ACNNNNNCTCC	4 cut(s)	1996, 2026, 2124, 2154
Bsc4I	CCNNNNNNNGG	6 cut(s)	940, 1834, 2042, 2333, 2497, 2969
Bse1I	ACTGG	8 cut(s)	1398, 1553, 1570, 1683, 2134, 2152, 2263, 2920
Bse3DI	GCAATG	2 cut(s)	192, 2908
Bse8I	GATNNNNATC	4 cut(s)	1539, 1596, 2073, 2276
BseAI	TCCGGA	1 cut(s)	561
BseBI	CCWGG	6 cut(s)	1743, 2328, 2445, 2482, 2553, 2653
BseDI	CCNNGG	6 cut(s)	1222, 1581, 1867, 1966, 2444, 2551
BseJI	GATNNNNATC	4 cut(s)	1539, 1596, 2073, 2276
BseLI	CCNNNNNNNGG	6 cut(s)	940, 1834, 2042, 2333, 2497, 2969
BseMI	GCAATG	2 cut(s)	192, 2908
BseMII	CTCAG	4 cut(s)	160, 460, 1121, 2885
BseNI	ACTGG	8 cut(s)	1398, 1553, 1570, 1683, 2134, 2152, 2263, 2920
BseRI	GAGGAG	2 cut(s)	966, 2004
BseSI	GKGCMC	2 cut(s)	1387, 1819
BseYI	CCCAGC	2 cut(s)	410, 1818
BsgI	GTGCAG	2 cut(s)	1551, 2759
Bsh1285I	CGRYCG	1 cut(s)	2719
BshFI	GGCC	2 cut(s)	1817, 2288
BshNI	GGYRCC	1 cut(s)	1004
BsiEI	CGRYCG	1 cut(s)	2719
BsiHKAI	GWGCWC	4 cut(s)	164, 976, 1162, 2611
BsiSI	CCGG	1 cut(s)	562
BslFI	GGGAC	1 cut(s)	1417
BslI	CCNNNNNNNGG	6 cut(s)	940, 1834, 2042, 2333, 2497, 2969
BsmAI	GTCTC	1 cut(s)	620
BsmFI	GGGAC	1 cut(s)	1417
BsmI	GAATGC	1 cut(s)	966
BsnI	GGCC	2 cut(s)	1817, 2288
Bsp120I	GGGCCC	1 cut(s)	1815
Bsp1286I	GDGCHC	7 cut(s)	164, 976, 1162, 1196, 1387, 1819, 2611
Bsp13I	TCCGGA	1 cut(s)	561
Bsp1407I	TGTACA	3 cut(s)	1238, 1928, 2374
Bsp143I	GATC	7 cut(s)	61, 871, 1597, 2074, 2410, 2484, 2958
Bsp1720I	GCTNAGC	1 cut(s)	535
Bsp19I	CCATGG	1 cut(s)	1966
BspACI	CCGC	5 cut(s)	242, 1002, 1984, 2712, 2719
BspANI	GGCC	2 cut(s)	1817, 2288
BspCNI	CTCAG	4 cut(s)	159, 459, 1122, 2884
BspEI	TCCGGA	1 cut(s)	561
BspHI	TCATGA	1 cut(s)	2280
BspLI	GGNNCC	7 cut(s)	1006, 1309, 1579, 1617, 1817, 2341, 2479
BspMAI	CTGCAG	5 cut(s)	929, 1462, 1483, 1605, 2088
BspPI	GGATC	3 cut(s)	56, 2492, 2953
BspQI	GCTCTTC	1 cut(s)	1116
BspT107I	GGYRCC	1 cut(s)	1004
BspTI	CTTAAG	1 cut(s)	2680
BsrDI	GCAATG	2 cut(s)	192, 2908
BsrGI	TGTACA	3 cut(s)	1238, 1928, 2374
BsrI	ACTGG	8 cut(s)	1398, 1553, 1570, 1683, 2134, 2152, 2263, 2920
BssECI	CCNNGG	6 cut(s)	1222, 1581, 1867, 1966, 2444, 2551
BssMI	GATC	7 cut(s)	61, 871, 1597, 2074, 2410, 2484, 2958
BssNAI	GTATAC	1 cut(s)	354
BssT1I	CCWWGG	4 cut(s)	1222, 1581, 1867, 1966
Bst1107I	GTATAC	1 cut(s)	354
Bst2UI	CCWGG	6 cut(s)	1743, 2328, 2445, 2482, 2553, 2653
Bst4CI	ACNGT	6 cut(s)	95, 305, 839, 954, 969, 1372
Bst6I	CTCTTC	1 cut(s)	1116
BstAFI	CTTAAG	1 cut(s)	2680
BstAPI	GCANNNNNTGC	2 cut(s)	1805, 2063
BstAUI	TGTACA	3 cut(s)	1238, 1928, 2374
BstBAI	YACGTR	3 cut(s)	317, 359, 2039
BstC8I	GCNNGC	5 cut(s)	829, 859, 1988, 2611, 2723
BstDEI	CTNAG	6 cut(s)	146, 446, 535, 1130, 1187, 2871
BstDSI	CCRYGG	1 cut(s)	1966
BstEII	GGTNACC	1 cut(s)	2452
BstHHI	GCGC	1 cut(s)	2930
BstKTI	GATC	7 cut(s)	64, 874, 1600, 2077, 2413, 2487, 2961
BstMAI	GTCTC	1 cut(s)	620
BstMBI	GATC	7 cut(s)	61, 871, 1597, 2074, 2410, 2484, 2958
BstMCI	CGRYCG	1 cut(s)	2719
BstMWI	GCNNNNNNNGC	9 cut(s)	275, 284, 863, 1805, 1814, 2063, 2378, 2486, 2827
BstNI	CCWGG	6 cut(s)	1743, 2328, 2445, 2482, 2553, 2653
BstNSI	RCATGY	3 cut(s)	731, 861, 2978
BstPI	GGTNACC	1 cut(s)	2452
BstSCI	CCNGG	6 cut(s)	1741, 2326, 2443, 2480, 2551, 2651
BstSFI	CTRYAG	6 cut(s)	468, 925, 1458, 1479, 1601, 2084
BstSLI	GKGCMC	2 cut(s)	1387, 1819
BstV2I	GAAGAC	1 cut(s)	2805
BstX2I	RGATCY	1 cut(s)	2958
BstXI	CCANNNNNNTGG	1 cut(s)	1343
BstYI	RGATCY	1 cut(s)	2958
BstZ17I	GTATAC	1 cut(s)	354
BsuI	GTATCC	1 cut(s)	1505
BsuRI	GGCC	2 cut(s)	1817, 2288
BtgI	CCRYGG	1 cut(s)	1966
BtsI	GCAGTG	1 cut(s)	2809
BtsIMutI	CAGTG	5 cut(s)	950, 965, 1405, 1676, 2809
Cac8I	GCNNGC	5 cut(s)	829, 859, 1988, 2611, 2723
CciI	TCATGA	1 cut(s)	2280
CfoI	GCGC	1 cut(s)	2930
Cfr13I	GGNCC	4 cut(s)	1215, 1551, 1815, 1816
CsiI	ACCWGGT	1 cut(s)	2651
Csp6I	GTAC	8 cut(s)	450, 488, 840, 946, 1005, 1239, 1929, 2375
CspCI	CAANNNNNGTGG	4 cut(s)	580, 615, 1642, 1677
CviQI	GTAC	8 cut(s)	450, 488, 840, 946, 1005, 1239, 1929, 2375
DdeI	CTNAG	6 cut(s)	146, 446, 535, 1130, 1187, 2871
DpnI	GATC	7 cut(s)	63, 873, 1599, 2076, 2412, 2486, 2960
DpnII	GATC	7 cut(s)	61, 871, 1597, 2074, 2410, 2484, 2958
DraI	TTTAAA	2 cut(s)	846, 1357
DraIII	CACNNNGTG	3 cut(s)	713, 971, 2042
Eam1104I	CTCTTC	1 cut(s)	1116
EarI	CTCTTC	1 cut(s)	1116
Ecl136II	GAGCTC	1 cut(s)	1160
Eco130I	CCWWGG	4 cut(s)	1222, 1581, 1867, 1966
Eco147I	AGGCCT	1 cut(s)	2288
Eco24I	GRGCYC	3 cut(s)	1162, 1196, 1819
Eco47I	GGWCC	2 cut(s)	1215, 1551
Eco53kI	GAGCTC	1 cut(s)	1160
Eco57I	CTGAAG	3 cut(s)	2367, 2525, 2613
Eco91I	GGTNACC	1 cut(s)	2452
EcoICRI	GAGCTC	1 cut(s)	1160
EcoO65I	GGTNACC	1 cut(s)	2452
EcoRI	GAATTC	1 cut(s)	1915
EcoRII	CCWGG	6 cut(s)	1741, 2326, 2443, 2480, 2551, 2651
EcoT14I	CCWWGG	4 cut(s)	1222, 1581, 1867, 1966
EcoT22I	ATGCAT	1 cut(s)	723
EcoT38I	GRGCYC	3 cut(s)	1162, 1196, 1819
ErhI	CCWWGG	4 cut(s)	1222, 1581, 1867, 1966
FalI	AAGNNNNNCTT	2 cut(s)	1092, 1124
FaqI	GGGAC	1 cut(s)	1417
FauNDI	CATATG	2 cut(s)	1146, 2626
FblI	GTMKAC	1 cut(s)	353
FriOI	GRGCYC	3 cut(s)	1162, 1196, 1819
GlaI	GCGC	1 cut(s)	2929
GsaI	CCCAGC	2 cut(s)	414, 1822
GsuI	CTGGAG	3 cut(s)	2151, 2682, 2937
HaeIII	GGCC	2 cut(s)	1817, 2288
HapII	CCGG	1 cut(s)	562
HhaI	GCGC	1 cut(s)	2930
Hin6I	GCGC	1 cut(s)	2928
HinP1I	GCGC	1 cut(s)	2928
HincII	GTYRAC	2 cut(s)	40, 1368
HindII	GTYRAC	2 cut(s)	40, 1368
HindIII	AAGCTT	2 cut(s)	1060, 2507
HpaII	CCGG	1 cut(s)	562
HphI	GGTGA	3 cut(s)	1074, 2273, 2372
Hpy166II	GTNNAC	7 cut(s)	40, 91, 354, 547, 1241, 1368, 2972
Hpy8I	GTNNAC	7 cut(s)	40, 91, 354, 547, 1241, 1368, 2972
Hpy99I	CGWCG	2 cut(s)	736, 1366
HpyCH4III	ACNGT	6 cut(s)	95, 305, 839, 954, 969, 1372
HpyCH4IV	ACGT	4 cut(s)	316, 358, 557, 2038
HpyF10VI	GCNNNNNNNGC	9 cut(s)	275, 284, 863, 1805, 1814, 2063, 2378, 2486, 2827
HpyF3I	CTNAG	6 cut(s)	146, 446, 535, 1130, 1187, 2871
HpySE526I	ACGT	4 cut(s)	316, 358, 557, 2038
HspAI	GCGC	1 cut(s)	2928
Kpn2I	TCCGGA	1 cut(s)	561
KpnI	GGTACC	1 cut(s)	1008
Kzo9I	GATC	7 cut(s)	61, 871, 1597, 2074, 2410, 2484, 2958
LguI	GCTCTTC	1 cut(s)	1116
LmnI	GCTCC	6 cut(s)	159, 979, 1157, 2189, 2477, 2528
MabI	ACCWGGT	1 cut(s)	2651
MaeII	ACGT	4 cut(s)	316, 358, 557, 2038
MaeIII	GTNAC	7 cut(s)	56, 76, 95, 441, 2125, 2452, 3028
MalI	GATC	7 cut(s)	63, 873, 1599, 2076, 2412, 2486, 2960
MboI	GATC	7 cut(s)	61, 871, 1597, 2074, 2410, 2484, 2958
MfeI	CAATTG	1 cut(s)	540
MflI	RGATCY	1 cut(s)	2958
MhlI	GDGCHC	7 cut(s)	164, 976, 1162, 1196, 1387, 1819, 2611
MlyI	GAGTC	6 cut(s)	96, 645, 893, 939, 2594, 2752
MmeI	TCCRAC	6 cut(s)	723, 1242, 1324, 1489, 2443, 2818
Mph1103I	ATGCAT	1 cut(s)	723
MroI	TCCGGA	1 cut(s)	561
MroXI	GAANNNNTTC	4 cut(s)	15, 1107, 1306, 1620
MslI	CAYNNNNRTG	5 cut(s)	600, 726, 856, 1145, 2733
MspA1I	CMGCKG	4 cut(s)	278, 455, 1986, 2785
MspCI	CTTAAG	1 cut(s)	2680
MspI	CCGG	1 cut(s)	562
MspR9I	CCNGG	6 cut(s)	1743, 2328, 2445, 2482, 2553, 2653
MunI	CAATTG	1 cut(s)	540
Mva1269I	GAATGC	1 cut(s)	966
MvaI	CCWGG	6 cut(s)	1743, 2328, 2445, 2482, 2553, 2653
MwoI	GCNNNNNNNGC	9 cut(s)	275, 284, 863, 1805, 1814, 2063, 2378, 2486, 2827
NcoI	CCATGG	1 cut(s)	1966
NdeI	CATATG	2 cut(s)	1146, 2626
NdeII	GATC	7 cut(s)	61, 871, 1597, 2074, 2410, 2484, 2958
NlaIV	GGNNCC	7 cut(s)	1006, 1309, 1579, 1617, 1817, 2341, 2479
NmuCI	GTSAC	2 cut(s)	56, 3028
NsiI	ATGCAT	1 cut(s)	723
NspI	RCATGY	3 cut(s)	731, 861, 2978
PaeI	GCATGC	1 cut(s)	861
PagI	TCATGA	1 cut(s)	2280
PceI	AGGCCT	1 cut(s)	2288
PciSI	GCTCTTC	1 cut(s)	1116
PcsI	WCGNNNNNNNCGW	1 cut(s)	2035
PctI	GAATGC	1 cut(s)	966
PdmI	GAANNNNTTC	4 cut(s)	15, 1107, 1306, 1620
PfeI	GAWTC	7 cut(s)	11, 281, 400, 1227, 1394, 2069, 2165
PflMI	CCANNNNNTGG	4 cut(s)	940, 1834, 2042, 2969
PfoI	TCCNGGA	1 cut(s)	1741
PleI	GAGTC	6 cut(s)	95, 644, 893, 938, 2594, 2751
PpsI	GAGTC	6 cut(s)	95, 644, 893, 938, 2594, 2751
Ppu21I	YACGTR	3 cut(s)	317, 359, 2039
PsiI	TTATAA	2 cut(s)	381, 1718
Psp124BI	GAGCTC	1 cut(s)	1162
Psp6I	CCWGG	6 cut(s)	1741, 2326, 2443, 2480, 2551, 2651
PspEI	GGTNACC	1 cut(s)	2452
PspFI	CCCAGC	2 cut(s)	410, 1818
PspGI	CCWGG	6 cut(s)	1741, 2326, 2443, 2480, 2551, 2651
PspN4I	GGNNCC	7 cut(s)	1006, 1309, 1579, 1617, 1817, 2341, 2479
PspOMI	GGGCCC	1 cut(s)	1815
PspPI	GGNCC	4 cut(s)	1215, 1551, 1815, 1816
PstI	CTGCAG	5 cut(s)	929, 1462, 1483, 1605, 2088
PsuI	RGATCY	1 cut(s)	2958
PvuII	CAGCTG	3 cut(s)	278, 455, 2785
RsaI	GTAC	8 cut(s)	451, 489, 841, 947, 1006, 1240, 1930, 2376
RsaNI	GTAC	8 cut(s)	450, 488, 840, 946, 1005, 1239, 1929, 2375
RseI	CAYNNNNRTG	5 cut(s)	600, 726, 856, 1145, 2733
SacI	GAGCTC	1 cut(s)	1162
SapI	GCTCTTC	1 cut(s)	1116
Sau3AI	GATC	7 cut(s)	61, 871, 1597, 2074, 2410, 2484, 2958
Sau96I	GGNCC	4 cut(s)	1215, 1551, 1815, 1816
ScaI	AGTACT	3 cut(s)	489, 841, 947
SchI	GAGTC	6 cut(s)	96, 645, 893, 939, 2594, 2752
ScrFI	CCNGG	6 cut(s)	1743, 2328, 2445, 2482, 2553, 2653
SduI	GDGCHC	7 cut(s)	164, 976, 1162, 1196, 1387, 1819, 2611
SexAI	ACCWGGT	1 cut(s)	2651
SfcI	CTRYAG	6 cut(s)	468, 925, 1458, 1479, 1601, 2084
SinI	GGWCC	2 cut(s)	1215, 1551
SmiI	ATTTAAAT	1 cut(s)	1357
SmiMI	CAYNNNNRTG	5 cut(s)	600, 726, 856, 1145, 2733
SmlI	CTYRAG	2 cut(s)	2018, 2680
SmoI	CTYRAG	2 cut(s)	2018, 2680
SphI	GCATGC	1 cut(s)	861
SseBI	AGGCCT	1 cut(s)	2288
SsiI	CCGC	5 cut(s)	242, 1002, 1984, 2712, 2719
SspI	AATATT	3 cut(s)	609, 662, 1699
SstI	GAGCTC	1 cut(s)	1162
StuI	AGGCCT	1 cut(s)	2288
StyD4I	CCNGG	6 cut(s)	1741, 2326, 2443, 2480, 2551, 2651
StyI	CCWWGG	4 cut(s)	1222, 1581, 1867, 1966
SwaI	ATTTAAAT	1 cut(s)	1357
TaaI	ACNGT	6 cut(s)	95, 305, 839, 954, 969, 1372
TaiI	ACGT	4 cut(s)	319, 361, 560, 2041
TaqI	TCGA	3 cut(s)	902, 1611, 2077
TatI	WGTACW	7 cut(s)	449, 487, 839, 945, 1238, 1928, 2374
TauI	GCSGC	1 cut(s)	2714
TfiI	GAWTC	7 cut(s)	11, 281, 400, 1227, 1394, 2069, 2165
TscAI	CASTG	5 cut(s)	957, 972, 1405, 1683, 2816
TseFI	GTSAC	2 cut(s)	56, 3028
Tsp45I	GTSAC	2 cut(s)	56, 3028
TspGWI	ACGGA	1 cut(s)	680
TspRI	CASTG	5 cut(s)	957, 972, 1405, 1683, 2816
Van91I	CCANNNNNTGG	4 cut(s)	940, 1834, 2042, 2969
Vha464I	CTTAAG	1 cut(s)	2680
VpaK11BI	GGWCC	2 cut(s)	1215, 1551
XapI	RAATTY	8 cut(s)	107, 134, 213, 1524, 1915, 2193, 2580, 2855
XbaI	TCTAGA	3 cut(s)	1111, 2603, 2644
XceI	RCATGY	3 cut(s)	731, 861, 2978
XcmI	CCANNNNNNNNNTGG	1 cut(s)	527
XmaJI	CCTAGG	1 cut(s)	1867
XmiI	GTMKAC	1 cut(s)	353
XmnI	GAANNNNTTC	4 cut(s)	15, 1107, 1306, 1620
ZrmI	AGTACT	3 cut(s)	489, 841, 947
Zsp2I	ATGCAT	1 cut(s)	723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.