No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000131.1_g000034 Rmu_sc0000133.1_g000033 Rmu_sc0000806.1_g000028 Rmu_sc0001464.1_g000015 Rmu_sc0002460.1_g000047 Rmu_sc0002914.1_g000022 Rmu_sc0005142.1_g000029 Rmu_sc0005446.1_g000022 Rmu_sc0007727.1_g000007 Rmu_sc0012995.1_g000002 Rmu_sc0013240.1_g000002 Rmu_ssc0000434.1_g000034 Rmu_ssc0000436.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00013370 |
| rosa_samantha | Rh2BG200500 Rh6AG141400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 145 |
| AclWI | GGATC | 1 cut(s) | 47 |
| AfaI | GTAC | 1 cut(s) | 32 |
| AgsI | TTSAA | 1 cut(s) | 160 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 72, 104 |
| Alw26I | GTCTC | 2 cut(s) | 76, 280 |
| AlwI | GGATC | 1 cut(s) | 47 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 189 |
| BbsI | GAAGAC | 1 cut(s) | 260 |
| BccI | CCATC | 2 cut(s) | 126, 280 |
| BcoDI | GTCTC | 2 cut(s) | 76, 280 |
| BfaI | CTAG | 3 cut(s) | 57, 77, 122 |
| BpiI | GAAGAC | 1 cut(s) | 260 |
| BpmI | CTGGAG | 1 cut(s) | 11 |
| BsaI | GGTCTC | 1 cut(s) | 76 |
| Bse1I | ACTGG | 1 cut(s) | 28 |
| BseGI | GGATG | 1 cut(s) | 22 |
| BseNI | ACTGG | 1 cut(s) | 28 |
| BsmAI | GTCTC | 2 cut(s) | 76, 280 |
| BsmBI | CGTCTC | 1 cut(s) | 280 |
| Bso31I | GGTCTC | 1 cut(s) | 76 |
| Bsp143I | GATC | 2 cut(s) | 52, 228 |
| BspACI | CCGC | 1 cut(s) | 145 |
| BspPI | GGATC | 1 cut(s) | 47 |
| BspTNI | GGTCTC | 1 cut(s) | 76 |
| BsrI | ACTGG | 1 cut(s) | 28 |
| BssMI | GATC | 2 cut(s) | 52, 228 |
| BstDEI | CTNAG | 1 cut(s) | 294 |
| BstF5I | GGATG | 1 cut(s) | 22 |
| BstKTI | GATC | 2 cut(s) | 55, 231 |
| BstMAI | GTCTC | 2 cut(s) | 76, 280 |
| BstMBI | GATC | 2 cut(s) | 52, 228 |
| BstV2I | GAAGAC | 1 cut(s) | 260 |
| BstX2I | RGATCY | 1 cut(s) | 52 |
| BstYI | RGATCY | 1 cut(s) | 52 |
| BtgZI | GCGATG | 1 cut(s) | 254 |
| BtsCI | GGATG | 1 cut(s) | 22 |
| Csp6I | GTAC | 1 cut(s) | 31 |
| CviAII | CATG | 1 cut(s) | 101 |
| CviJI | RGCY | 2 cut(s) | 64, 141 |
| CviKI_1 | RGCY | 2 cut(s) | 64, 141 |
| CviQI | GTAC | 1 cut(s) | 31 |
| DdeI | CTNAG | 1 cut(s) | 294 |
| DpnI | GATC | 2 cut(s) | 54, 230 |
| DpnII | GATC | 2 cut(s) | 52, 228 |
| Eco31I | GGTCTC | 1 cut(s) | 76 |
| Esp3I | CGTCTC | 1 cut(s) | 280 |
| FaeI | CATG | 1 cut(s) | 104 |
| FaiI | YATR | 6 cut(s) | 12, 14, 41, 102, 138, 217 |
| FatI | CATG | 1 cut(s) | 100 |
| FauNDI | CATATG | 1 cut(s) | 12 |
| FokI | GGATG | 1 cut(s) | 29 |
| FspBI | CTAG | 3 cut(s) | 57, 77, 122 |
| GsuI | CTGGAG | 1 cut(s) | 11 |
| Hin1II | CATG | 1 cut(s) | 104 |
| HinfI | GANTC | 3 cut(s) | 20, 104, 256 |
| Hpy188I | TCNGA | 1 cut(s) | 184 |
| Hpy188III | TCNNGA | 2 cut(s) | 116, 170 |
| HpyAV | CCTTC | 1 cut(s) | 54 |
| HpyCH4IV | ACGT | 1 cut(s) | 96 |
| HpyCH4V | TGCA | 1 cut(s) | 281 |
| HpyF3I | CTNAG | 1 cut(s) | 294 |
| HpySE526I | ACGT | 1 cut(s) | 96 |
| Hsp92II | CATG | 1 cut(s) | 104 |
| Kzo9I | GATC | 2 cut(s) | 52, 228 |
| LmnI | GCTCC | 1 cut(s) | 30 |
| LpnPI | CCDG | 3 cut(s) | 41, 122, 129 |
| MaeI | CTAG | 3 cut(s) | 57, 77, 122 |
| MaeII | ACGT | 1 cut(s) | 96 |
| MalI | GATC | 2 cut(s) | 54, 230 |
| MboI | GATC | 2 cut(s) | 52, 228 |
| MboII | GAAGA | 4 cut(s) | 59, 62, 92, 265 |
| MflI | RGATCY | 1 cut(s) | 52 |
| MluCI | AATT | 1 cut(s) | 212 |
| MlyI | GAGTC | 2 cut(s) | 98, 250 |
| MnlI | CCTC | 1 cut(s) | 152 |
| MroXI | GAANNNNTTC | 1 cut(s) | 189 |
| MseI | TTAA | 2 cut(s) | 198, 206 |
| MslI | CAYNNNNRTG | 1 cut(s) | 15 |
| NdeI | CATATG | 1 cut(s) | 12 |
| NdeII | GATC | 2 cut(s) | 52, 228 |
| NlaIII | CATG | 1 cut(s) | 104 |
| PdmI | GAANNNNTTC | 1 cut(s) | 189 |
| PfeI | GAWTC | 1 cut(s) | 20 |
| PleI | GAGTC | 2 cut(s) | 98, 250 |
| PpsI | GAGTC | 2 cut(s) | 98, 250 |
| PsuI | RGATCY | 1 cut(s) | 52 |
| RsaI | GTAC | 1 cut(s) | 32 |
| RsaNI | GTAC | 1 cut(s) | 31 |
| RseI | CAYNNNNRTG | 1 cut(s) | 15 |
| SaqAI | TTAA | 2 cut(s) | 198, 206 |
| Sau3AI | GATC | 2 cut(s) | 52, 228 |
| SchI | GAGTC | 2 cut(s) | 98, 250 |
| SetI | ASST | 2 cut(s) | 99, 123 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 15 |
| Sse9I | AATT | 1 cut(s) | 212 |
| SsiI | CCGC | 1 cut(s) | 145 |
| SspMI | CTAG | 3 cut(s) | 57, 77, 122 |
| TaiI | ACGT | 1 cut(s) | 99 |
| TasI | AATT | 1 cut(s) | 212 |
| TfiI | GAWTC | 1 cut(s) | 20 |
| Tru1I | TTAA | 2 cut(s) | 198, 206 |
| Tru9I | TTAA | 2 cut(s) | 198, 206 |
| TspDTI | ATGAA | 2 cut(s) | 56, 60 |
| XmnI | GAANNNNTTC | 1 cut(s) | 189 |
| XspI | CTAG | 3 cut(s) | 57, 77, 122 |