Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013275.1

Orthogroup ID

OG0010853

Physical Location & Seq

Genomic Coordinates Forward (+)

7862 .. 12877

Gene Structure 5016 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013275.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

atgaagttccaaatggacgacgtcaccgtgtacttcccctacgaccacatctacccggagcaatacgcctacatgctggaactgaaacgcgccctggacgcgcgaggccactgcctcctggaaatgccgacgggcaccggaaaaaccatcgccctcctctcgctcatcaccagctacagtctctcgaagccctacaaccccgtcaagctcatctactgcacccgcaccgtccacgagatggagaagacgctcgccgagctcaagctcctccataaataccaggtccagcatctcggaaaacaggcggagatcctcgccatcgggctctctagtcgcaagaacctctgcgttaaccctaatgtgcttgccgccgagaatcgcgactccgtggacgccgcttgccgcaaattgaccgccagctgggtccgcgccgccgcgatcgggaaccctaatgtgccgagctgtgagttttttgagcagtttgagagggccgggcaaggtgtcgtcttgcctcctggggtttacaccttgcaggatttgagggcgtttggcaaggccgaagggtggtgcccttactttttggcgaggagaatggtcgaggcggccaatgtggtggtttatagttatcagtatttgcttgatcccaaagtggctgggattatatctaaggagttgcagaaggagtcggttgtggtgttcgatgaggctcacaatatagacaatgtgtgtatcgaggcgcttagtgttagtgtgaggaggcagacgcttgagggggctagaaggaatctcagtaagatgcagcaggatattgaaaggttcaaggccacagacgcaggaagattgcgacaagaatacaaccggcttgttgagggtttggcacaaggaggaaacctacccatcacggatgcttggcttcagaaccctgccctacctgacgatattctgaaggaggctgtgcccggaaatattcgcaaagcagaccattttctgcatgtcttacgaagattggtccagtatctcgaagggcgtcttgaaaccgagaacgttgagaaggagcttcctgttggctttgttaactcgattaatacccaagctggaattgaccagaaaactctcaagttctgctatgatcgtctacactcactcatgatgacattagaaattaccgacacagacgagttcttacacatccaaactatatgcgactttgcgacgcttgtgggaacatatgcccgtggtttctctatcataattgagccatttgacgagagaatgccacacattcctgatcctgttttgcagcttagttgtcatgatgcttctcttgctataaagcctgtatttgatcgatttcaatcggttgtgattacatctggaaccttgagcccgattgatctctacccccgtcttctcaattttaaccctgttgtgagtcgaagctttacaatgtcactaacgagagaatgcatatgcccaatggttctcacccggggaagtgatcagcttcctgtaagtacaaaatttgatatgagaagtgatctcggagtggtaaggaattatgggaggctgctgctggagatggtttctgttgttccagatggggtcgtatgttttttcgtcagctactcatatatggacggtatagtgaacagttggaatgaaagtggaatattaaaggaaataatgcagcataagcttgtgttcattgagacccaagatgtggtagagacaactttggctttggacaactaccgcaaagcttgcgattgtgggagaggtgctgtcttcttttctgtggccaggggaaaagtagctgaaggaatagacttcgatcgtcattatggacgattggtcatcatgtacggcgttccatttcagtacacgttaagcaagattttgcttgcacggcttgagtacttgagggagacctttcagataaaggaaggagatttcttgacctttgacgctttgagacaagctgcccaatgtgtcggccgggttatccggtcaaaagcggactacggcatgatgattttcgcggataaaaggtatagccgtcatgacaagcggtctaagctgccaggatggatcctctcccatctgagggatgcgcacctcaacttgagcactgatatggctcttcatatagcacgagagttcctcagaaagatggcccagccatatgacaggactggtggcagcagcggcaggaagacactcctatcccaggacgacttggagaggatgggccaaggaatcacttatgaaatgttgttttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009266 GO:0009314 GO:0009408 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03022 ko03420 map03022 map03420

Pfam Domains

Protein Families

DEAD_2 HBB Helicase_C_2

Protein Analysis

759

Amino Acids

86.13

Weight (kDa)

7.0

Isoelectric Point (pI)

45.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010853)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03190 AT1G03190
fragaria_vesca	FvH4_2g23690
malus_domestica	MD03G1266200.v1.1 MD11G1286800.v1.1
prunus_persica	Prupe.8G242000_v2.0.a1 Prupe.8G242000_v2.0.a1
pyrus_communis	pycom03g21270
rosa_chinensis	RchiOBHm_Chr6g0291151
rosa_laevigata	RLG00000012140
rosa_multiflora	Rmu_co8311277.1_g000001 Rmu_sc0004642.1_g000023 Rmu_sc0013275.1_g000002
rosa_roxburghii	Rroxscaffold_7G00176340
rosa_rugosa	Rorug06G0218000
rosa_samantha	Rh6AG328400 Rh6BG336000 Rh6CG342000 Rh6DG329300
rosa_wichuraiana	Rw6G028570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	24
Acc16I	TGCGCA	1 cut(s)	2112
AccB1I	GGYRCC	2 cut(s)	134, 567
AccB7I	CCANNNNNTGG	2 cut(s)	238, 1720
AccI	GTMKAC	1 cut(s)	1135
AccII	CGCG	7 cut(s)	90, 101, 103, 381, 429, 437, 2039
AclI	AACGTT	1 cut(s)	1044
AclWI	GGATC	5 cut(s)	304, 635, 1283, 2083, 2096
AcoI	YGGCCR	3 cut(s)	603, 1797, 1993
AcsI	RAATTY	1 cut(s)	1520
AcuI	CTGAAG	3 cut(s)	899, 965, 1836
AcyI	GRCGYC	3 cut(s)	21, 393, 1027
AfaI	GTAC	5 cut(s)	32, 1516, 1862, 1880, 1916
AfiI	CCNNNNNNNGG	8 cut(s)	238, 420, 441, 564, 1720, 2103, 2104, 2227
AflIII	ACRYGT	1 cut(s)	1881
AgsI	TTSAA	4 cut(s)	812, 820, 1034, 1355
AhdI	GACNNNNNGTC	2 cut(s)	1850, 2068
AjnI	CCWGG	7 cut(s)	93, 117, 279, 514, 1799, 2080, 2226
Alw21I	GWGCWC	2 cut(s)	261, 2129
Alw26I	GTCTC	5 cut(s)	185, 1703, 1721, 1919, 1966
AlwI	GGATC	5 cut(s)	304, 635, 1283, 2083, 2096
Ama87I	CYCGRG	1 cut(s)	1488
AoxI	GGCC	9 cut(s)	106, 489, 555, 603, 822, 1797, 1993, 2172, 2248
ApeKI	GCWGC	9 cut(s)	799, 1300, 1567, 1570, 1687, 1979, 2077, 2199, 2202
ApoI	RAATTY	1 cut(s)	1520
AseI	ATTAAT	1 cut(s)	1083
AspLEI	GCGC	5 cut(s)	92, 103, 431, 739, 2113
AspS9I	GGNCC	6 cut(s)	283, 424, 489, 1009, 2173, 2248
AsuC2I	CCSGG	6 cut(s)	56, 493, 960, 1489, 1490, 1997
AsuHPI	GGTGA	3 cut(s)	16, 160, 1477
AvaI	CYCGRG	1 cut(s)	1488
AvaII	GGWCC	3 cut(s)	283, 424, 1009
BaeGI	GKGCMC	3 cut(s)	137, 572, 960
BalI	TGGCCA	1 cut(s)	1799
BamHI	GGATCC	1 cut(s)	2088
BanI	GGYRCC	2 cut(s)	134, 567
BanII	GRGCYC	3 cut(s)	261, 327, 1388
BauI	CACGAG	2 cut(s)	233, 2151
BbsI	GAAGAC	4 cut(s)	251, 1400, 1777, 2219
Bbv12I	GWGCWC	2 cut(s)	261, 2129
BbvI	GCAGC	9 cut(s)	811, 1312, 1554, 1557, 1699, 1966, 2064, 2211, 2214
BceAI	ACGGC	4 cut(s)	1879, 1922, 2038, 2040
BcgI	CGANNNNNNTGC	2 cut(s)	93, 127
BciT130I	CCWGG	7 cut(s)	95, 119, 281, 516, 1801, 2082, 2228
BclI	TGATCA	1 cut(s)	1498
BcnI	CCSGG	6 cut(s)	56, 493, 960, 1489, 1490, 1997
BcoDI	GTCTC	5 cut(s)	185, 1703, 1721, 1919, 1966
BfaI	CTAG	2 cut(s)	330, 777
BfmI	CTRYAG	1 cut(s)	175
BfoI	RGCGCY	1 cut(s)	740
BmcAI	AGTACT	1 cut(s)	1916
Bme18I	GGWCC	3 cut(s)	283, 424, 1009
BmeRI	GACNNNNNGTC	2 cut(s)	1850, 2068
BmeT110I	CYCGRG	1 cut(s)	1488
BmgT120I	GGNCC	6 cut(s)	283, 424, 489, 1009, 2173, 2248
BmiI	GGNNCC	6 cut(s)	136, 425, 446, 569, 1378, 2090
BmsI	GCATC	5 cut(s)	298, 786, 895, 1306, 2098
BpiI	GAAGAC	4 cut(s)	251, 1400, 1777, 2219
BplI	GAGNNNNNCTC	2 cut(s)	2145, 2177
BpmI	CTGGAG	1 cut(s)	1595
BpuEI	CTTGAG	7 cut(s)	245, 788, 1100, 1402, 1931, 1939, 2143
BpuMI	CCSGG	6 cut(s)	56, 493, 960, 1489, 1490, 1997
Bsa29I	ATCGAT	1 cut(s)	1348
BsaBI	GATNNNNATC	1 cut(s)	1354
BsaHI	GRCGYC	3 cut(s)	21, 393, 1027
BsaI	GGTCTC	2 cut(s)	1703, 1919
BsaJI	CCNNGG	9 cut(s)	93, 387, 515, 1234, 1488, 1489, 1800, 2226, 2251
BsaWI	WCCGGW	2 cut(s)	137, 2004
Bsc4I	CCNNNNNNNGG	8 cut(s)	238, 420, 441, 564, 1720, 2103, 2104, 2227
Bse118I	RCCGGY	1 cut(s)	858
Bse1I	ACTGG	2 cut(s)	1012, 2197
Bse8I	GATNNNNATC	1 cut(s)	1354
BseBI	CCWGG	7 cut(s)	95, 119, 281, 516, 1801, 2082, 2228
BseCI	ATCGAT	1 cut(s)	1348
BseDI	CCNNGG	9 cut(s)	93, 387, 515, 1234, 1488, 1489, 1800, 2226, 2251
BseGI	GGATG	5 cut(s)	910, 1188, 2090, 2113, 2250
BseJI	GATNNNNATC	1 cut(s)	1354
BseLI	CCNNNNNNNGG	8 cut(s)	238, 420, 441, 564, 1720, 2103, 2104, 2227
BseMII	CTCAG	3 cut(s)	802, 2093, 2176
BseNI	ACTGG	2 cut(s)	1012, 2197
BseRI	GAGGAG	4 cut(s)	146, 257, 601, 769
BseSI	GKGCMC	3 cut(s)	137, 572, 960
BseX3I	CGGCCG	1 cut(s)	1993
BseXI	GCAGC	9 cut(s)	811, 1312, 1554, 1557, 1699, 1966, 2064, 2211, 2214
BseYI	CCCAGC	3 cut(s)	420, 653, 2175
BsgI	GTGCAG	1 cut(s)	202
Bsh1236I	CGCG	7 cut(s)	90, 101, 103, 381, 429, 437, 2039
Bsh1285I	CGRYCG	3 cut(s)	441, 1834, 1996
BshFI	GGCC	9 cut(s)	108, 491, 557, 605, 824, 1799, 1995, 2174, 2250
BshNI	GGYRCC	2 cut(s)	134, 567
BshVI	ATCGAT	1 cut(s)	1348
BsiEI	CGRYCG	3 cut(s)	441, 1834, 1996
BsiHKAI	GWGCWC	2 cut(s)	261, 2129
BsiHKCI	CYCGRG	1 cut(s)	1488
BsiSI	CCGG	8 cut(s)	56, 138, 492, 859, 960, 1489, 1996, 2005
BslI	CCNNNNNNNGG	8 cut(s)	238, 420, 441, 564, 1720, 2103, 2104, 2227
BsmAI	GTCTC	5 cut(s)	185, 1703, 1721, 1919, 1966
BsmI	GAATGC	2 cut(s)	1278, 1469
BsnI	GGCC	9 cut(s)	108, 491, 557, 605, 824, 1799, 1995, 2174, 2250
Bso31I	GGTCTC	2 cut(s)	1703, 1919
BsoBI	CYCGRG	1 cut(s)	1488
Bsp1286I	GDGCHC	7 cut(s)	137, 261, 327, 572, 960, 1388, 2129
Bsp68I	TCGCGA	1 cut(s)	381
BspANI	GGCC	9 cut(s)	108, 491, 557, 605, 824, 1799, 1995, 2174, 2250
BspCNI	CTCAG	3 cut(s)	801, 2094, 2175
BspDI	ATCGAT	1 cut(s)	1348
BspFNI	CGCG	7 cut(s)	90, 101, 103, 381, 429, 437, 2039
BspHI	TCATGA	3 cut(s)	1146, 1312, 2059
BspLI	GGNNCC	6 cut(s)	136, 425, 446, 569, 1378, 2090
BspPI	GGATC	5 cut(s)	304, 635, 1283, 2083, 2096
BspQI	GCTCTTC	1 cut(s)	2145
BspT107I	GGYRCC	2 cut(s)	134, 567
BspTNI	GGTCTC	2 cut(s)	1703, 1919
BsrFI	RCCGGY	1 cut(s)	858
BsrI	ACTGG	2 cut(s)	1012, 2197
BssAI	RCCGGY	1 cut(s)	858
BssECI	CCNNGG	9 cut(s)	93, 387, 515, 1234, 1488, 1489, 1800, 2226, 2251
BssNI	GRCGYC	3 cut(s)	21, 393, 1027
BssSI	CACGAG	2 cut(s)	233, 2151
BssT1I	CCWWGG	1 cut(s)	2251
Bst2BI	CACGAG	2 cut(s)	233, 2151
Bst2UI	CCWGG	7 cut(s)	95, 119, 281, 516, 1801, 2082, 2228
Bst4CI	ACNGT	5 cut(s)	28, 179, 229, 1640, 1652
Bst6I	CTCTTC	1 cut(s)	2145
BstACI	GRCGYC	3 cut(s)	21, 393, 1027
BstAPI	GCANNNNNTGC	1 cut(s)	1761
BstC8I	GCNNGC	6 cut(s)	252, 366, 400, 418, 1762, 1902
BstDEI	CTNAG	7 cut(s)	666, 740, 788, 1304, 2073, 2102, 2162
BstDSI	CCRYGG	2 cut(s)	387, 1234
BstENI	CCTNNNNNAGG	1 cut(s)	2225
BstF5I	GGATG	5 cut(s)	910, 1188, 2090, 2113, 2250
BstFNI	CGCG	7 cut(s)	90, 101, 103, 381, 429, 437, 2039
BstH2I	RGCGCY	1 cut(s)	740
BstHHI	GCGC	5 cut(s)	92, 103, 431, 739, 2113
BstMAI	GTCTC	5 cut(s)	185, 1703, 1721, 1919, 1966
BstMCI	CGRYCG	3 cut(s)	441, 1834, 1996
BstNI	CCWGG	7 cut(s)	95, 119, 281, 516, 1801, 2082, 2228
BstNSI	RCATGY	2 cut(s)	76, 995
BstSFI	CTRYAG	1 cut(s)	175
BstSLI	GKGCMC	3 cut(s)	137, 572, 960
BstUI	CGCG	7 cut(s)	90, 101, 103, 381, 429, 437, 2039
BstV1I	GCAGC	9 cut(s)	811, 1312, 1554, 1557, 1699, 1966, 2064, 2211, 2214
BstV2I	GAAGAC	4 cut(s)	251, 1400, 1777, 2219
BstX2I	RGATCY	2 cut(s)	309, 2088
BstXI	CCANNNNNNTGG	1 cut(s)	613
BstYI	RGATCY	2 cut(s)	309, 2088
BstZI	CGGCCG	1 cut(s)	1993
Bsu15I	ATCGAT	1 cut(s)	1348
BsuRI	GGCC	9 cut(s)	108, 491, 557, 605, 824, 1799, 1995, 2174, 2250
BsuTUI	ATCGAT	1 cut(s)	1348
BtgI	CCRYGG	2 cut(s)	387, 1234
BtgZI	GCGATG	1 cut(s)	133
BtsCI	GGATG	5 cut(s)	910, 1188, 2090, 2113, 2250
BtsI	GCAGTG	1 cut(s)	109
BtsIMutI	CAGTG	2 cut(s)	109, 2127
BtuMI	TCGCGA	1 cut(s)	381
Cac8I	GCNNGC	6 cut(s)	252, 366, 400, 418, 1762, 1902
CciI	TCATGA	3 cut(s)	1146, 1312, 2059
CfoI	GCGC	5 cut(s)	92, 103, 431, 739, 2113
Cfr10I	RCCGGY	1 cut(s)	858
Cfr13I	GGNCC	6 cut(s)	283, 424, 489, 1009, 2173, 2248
Cfr9I	CCCGGG	1 cut(s)	1488
ClaI	ATCGAT	1 cut(s)	1348
CseI	GACGC	8 cut(s)	107, 256, 401, 772, 839, 1016, 1222, 1973
CsiI	ACCWGGT	1 cut(s)	279
Csp6I	GTAC	5 cut(s)	31, 1515, 1861, 1879, 1915
CviAII	CATG	7 cut(s)	73, 992, 1147, 1313, 1858, 2026, 2060
CviQI	GTAC	5 cut(s)	31, 1515, 1861, 1879, 1915
DdeI	CTNAG	7 cut(s)	666, 740, 788, 1304, 2073, 2102, 2162
DriI	GACNNNNNGTC	2 cut(s)	1850, 2068
EaeI	YGGCCR	3 cut(s)	603, 1797, 1993
EagI	CGGCCG	1 cut(s)	1993
Eam1104I	CTCTTC	1 cut(s)	2145
Eam1105I	GACNNNNNGTC	2 cut(s)	1850, 2068
EarI	CTCTTC	1 cut(s)	2145
EciI	GGCGGA	1 cut(s)	320
Ecl136II	GAGCTC	1 cut(s)	259
EclXI	CGGCCG	1 cut(s)	1993
Eco130I	CCWWGG	1 cut(s)	2251
Eco24I	GRGCYC	3 cut(s)	261, 327, 1388
Eco31I	GGTCTC	2 cut(s)	1703, 1919
Eco47I	GGWCC	3 cut(s)	283, 424, 1009
Eco52I	CGGCCG	1 cut(s)	1993
Eco53kI	GAGCTC	1 cut(s)	259
Eco57I	CTGAAG	3 cut(s)	899, 965, 1836
Eco88I	CYCGRG	1 cut(s)	1488
EcoICRI	GAGCTC	1 cut(s)	259
EcoNI	CCTNNNNNAGG	1 cut(s)	2225
EcoRII	CCWGG	7 cut(s)	93, 117, 279, 514, 1799, 2080, 2226
EcoT14I	CCWWGG	1 cut(s)	2251
EcoT22I	ATGCAT	1 cut(s)	1469
EcoT38I	GRGCYC	3 cut(s)	261, 327, 1388
ErhI	CCWWGG	1 cut(s)	2251
FaeI	CATG	7 cut(s)	76, 995, 1150, 1316, 1861, 2029, 2063
FalI	AAGNNNNNCTT	2 cut(s)	1014, 1046
FatI	CATG	7 cut(s)	72, 991, 1146, 1312, 1857, 2025, 2059
FauI	CCCGC	1 cut(s)	230
FauNDI	CATATG	3 cut(s)	1228, 1469, 2182
FbaI	TGATCA	1 cut(s)	1498
FblI	GTMKAC	1 cut(s)	1135
FokI	GGATG	5 cut(s)	917, 1175, 2097, 2120, 2257
FriOI	GRGCYC	3 cut(s)	261, 327, 1388
FspAI	RTGCGCAY	1 cut(s)	2112
FspBI	CTAG	2 cut(s)	330, 777
FspI	TGCGCA	1 cut(s)	2112
GlaI	GCGC	5 cut(s)	91, 102, 430, 738, 2112
GsaI	CCCAGC	3 cut(s)	424, 657, 2179
GsuI	CTGGAG	1 cut(s)	1595
HaeII	RGCGCY	1 cut(s)	740
HaeIII	GGCC	9 cut(s)	108, 491, 557, 605, 824, 1799, 1995, 2174, 2250
HapII	CCGG	8 cut(s)	56, 138, 492, 859, 960, 1489, 1996, 2005
HgaI	GACGC	8 cut(s)	107, 256, 401, 772, 839, 1016, 1222, 1973
HhaI	GCGC	5 cut(s)	92, 103, 431, 739, 2113
Hin1I	GRCGYC	3 cut(s)	21, 393, 1027
Hin1II	CATG	7 cut(s)	76, 995, 1150, 1316, 1861, 2029, 2063
Hin6I	GCGC	5 cut(s)	90, 101, 429, 737, 2111
HinP1I	GCGC	5 cut(s)	90, 101, 429, 737, 2111
HincII	GTYRAC	2 cut(s)	352, 1075
HindII	GTYRAC	2 cut(s)	352, 1075
HindIII	AAGCTT	3 cut(s)	1438, 1694, 1758
HinfI	GANTC	6 cut(s)	376, 383, 683, 784, 1432, 2256
HpaI	GTTAAC	2 cut(s)	352, 1075
HpaII	CCGG	8 cut(s)	56, 138, 492, 859, 960, 1489, 1996, 2005
HphI	GGTGA	3 cut(s)	16, 160, 1477
Hpy166II	GTNNAC	9 cut(s)	31, 232, 352, 391, 523, 1075, 1136, 1648, 1881
Hpy188I	TCNGA	7 cut(s)	296, 918, 945, 1544, 1935, 2103, 2165
Hpy8I	GTNNAC	9 cut(s)	31, 232, 352, 391, 523, 1075, 1136, 1648, 1881
Hpy99I	CGWCG	3 cut(s)	23, 133, 1216
HpyAV	CCTTC	8 cut(s)	554, 673, 774, 940, 1016, 1045, 1811, 1937
HpyCH4III	ACNGT	5 cut(s)	28, 179, 229, 1640, 1652
HpyCH4IV	ACGT	3 cut(s)	21, 1044, 1883
HpyCH4V	TGCA	9 cut(s)	219, 532, 676, 799, 991, 1300, 1467, 1687, 1904
HpyF3I	CTNAG	7 cut(s)	666, 740, 788, 1304, 2073, 2102, 2162
HpySE526I	ACGT	3 cut(s)	21, 1044, 1883
Hsp92I	GRCGYC	3 cut(s)	21, 393, 1027
Hsp92II	CATG	7 cut(s)	76, 995, 1150, 1316, 1861, 2029, 2063
HspAI	GCGC	5 cut(s)	90, 101, 429, 737, 2111
Ksp22I	TGATCA	1 cut(s)	1498
KspAI	GTTAAC	2 cut(s)	352, 1075
LguI	GCTCTTC	1 cut(s)	2145
LmnI	GCTCC	3 cut(s)	58, 270, 1054
Lsp1109I	GCAGC	9 cut(s)	811, 1312, 1554, 1557, 1699, 1966, 2064, 2211, 2214
LweI	GCATC	5 cut(s)	298, 786, 895, 1306, 2098
MabI	ACCWGGT	1 cut(s)	279
MaeI	CTAG	2 cut(s)	330, 777
MaeII	ACGT	3 cut(s)	21, 1044, 1883
MaeIII	GTNAC	2 cut(s)	22, 1449
MboII	GAAGA	7 cut(s)	256, 849, 1014, 1400, 1777, 2132, 2224
MflI	RGATCY	2 cut(s)	309, 2088
MhlI	GDGCHC	7 cut(s)	137, 261, 327, 572, 960, 1388, 2129
MlsI	TGGCCA	1 cut(s)	1799
MluCI	AATT	7 cut(s)	407, 1098, 1161, 1251, 1414, 1520, 1555
MluNI	TGGCCA	1 cut(s)	1799
MlyI	GAGTC	3 cut(s)	377, 692, 1441
MmeI	TCCRAC	1 cut(s)	1634
Mox20I	TGGCCA	1 cut(s)	1799
Mph1103I	ATGCAT	1 cut(s)	1469
MscI	TGGCCA	1 cut(s)	1799
MseI	TTAA	6 cut(s)	351, 1074, 1083, 1419, 1673, 1886
MslI	CAYNNNNRTG	1 cut(s)	2132
Msp20I	TGGCCA	1 cut(s)	1799
MspA1I	CMGCKG	2 cut(s)	420, 2205
MspI	CCGG	8 cut(s)	56, 138, 492, 859, 960, 1489, 1996, 2005
Mva1269I	GAATGC	2 cut(s)	1278, 1469
MvaI	CCWGG	7 cut(s)	95, 119, 281, 516, 1801, 2082, 2228
MvnI	CGCG	7 cut(s)	90, 101, 103, 381, 429, 437, 2039
NciI	CCSGG	6 cut(s)	56, 493, 960, 1489, 1490, 1997
NdeI	CATATG	3 cut(s)	1228, 1469, 2182
NlaIII	CATG	7 cut(s)	76, 995, 1150, 1316, 1861, 2029, 2063
NlaIV	GGNNCC	6 cut(s)	136, 425, 446, 569, 1378, 2090
NmeAIII	GCCGAG	3 cut(s)	280, 397, 483
NmuCI	GTSAC	2 cut(s)	22, 1449
NruI	TCGCGA	1 cut(s)	381
NsbI	TGCGCA	1 cut(s)	2112
NsiI	ATGCAT	1 cut(s)	1469
NspI	RCATGY	2 cut(s)	76, 995
PagI	TCATGA	3 cut(s)	1146, 1312, 2059
PciSI	GCTCTTC	1 cut(s)	2145
PcsI	WCGNNNNNNNCGW	1 cut(s)	24
PctI	GAATGC	2 cut(s)	1278, 1469
PfeI	GAWTC	3 cut(s)	376, 784, 2256
PflFI	GACNNNGTC	1 cut(s)	20
PflMI	CCANNNNNTGG	2 cut(s)	238, 1720
PfoI	TCCNGGA	1 cut(s)	117
Ple19I	CGATCG	2 cut(s)	441, 1834
PleI	GAGTC	3 cut(s)	377, 691, 1440
PpsI	GAGTC	3 cut(s)	377, 691, 1440
PshBI	ATTAAT	1 cut(s)	1083
Psp124BI	GAGCTC	1 cut(s)	261
Psp1406I	AACGTT	1 cut(s)	1044
Psp6I	CCWGG	7 cut(s)	93, 117, 279, 514, 1799, 2080, 2226
PspFI	CCCAGC	3 cut(s)	420, 653, 2175
PspGI	CCWGG	7 cut(s)	93, 117, 279, 514, 1799, 2080, 2226
PspN4I	GGNNCC	6 cut(s)	136, 425, 446, 569, 1378, 2090
PspPI	GGNCC	6 cut(s)	283, 424, 489, 1009, 2173, 2248
PsuI	RGATCY	2 cut(s)	309, 2088
PsyI	GACNNNGTC	1 cut(s)	20
PvuI	CGATCG	2 cut(s)	441, 1834
PvuII	CAGCTG	1 cut(s)	420
RruI	TCGCGA	1 cut(s)	381
RsaI	GTAC	5 cut(s)	32, 1516, 1862, 1880, 1916
RsaNI	GTAC	5 cut(s)	31, 1515, 1861, 1879, 1915
RseI	CAYNNNNRTG	1 cut(s)	2132
SacI	GAGCTC	1 cut(s)	261
SapI	GCTCTTC	1 cut(s)	2145
SaqAI	TTAA	6 cut(s)	351, 1074, 1083, 1419, 1673, 1886
Sau96I	GGNCC	6 cut(s)	283, 424, 489, 1009, 2173, 2248
ScaI	AGTACT	1 cut(s)	1916
SchI	GAGTC	3 cut(s)	377, 692, 1441
SduI	GDGCHC	7 cut(s)	137, 261, 327, 572, 960, 1388, 2129
SexAI	ACCWGGT	1 cut(s)	279
SfaNI	GCATC	5 cut(s)	298, 786, 895, 1306, 2098
SfcI	CTRYAG	1 cut(s)	175
SinI	GGWCC	3 cut(s)	283, 424, 1009
SmaI	CCCGGG	1 cut(s)	1490
SmiMI	CAYNNNNRTG	1 cut(s)	2132
SmlI	CTYRAG	7 cut(s)	260, 767, 1115, 1381, 1910, 1918, 2122
SmoI	CTYRAG	7 cut(s)	260, 767, 1115, 1381, 1910, 1918, 2122
Sse9I	AATT	7 cut(s)	407, 1098, 1161, 1251, 1414, 1520, 1555
SspI	AATATT	2 cut(s)	967, 1671
SspMI	CTAG	2 cut(s)	330, 777
SstI	GAGCTC	1 cut(s)	261
StyI	CCWWGG	1 cut(s)	2251
TaaI	ACNGT	5 cut(s)	28, 179, 229, 1640, 1652
TaiI	ACGT	3 cut(s)	24, 1047, 1886
TaqI	TCGA	9 cut(s)	185, 597, 699, 732, 1020, 1079, 1348, 1435, 1830
TasI	AATT	7 cut(s)	407, 1098, 1161, 1251, 1414, 1520, 1555
TatI	WGTACW	4 cut(s)	30, 1514, 1878, 1914
TauI	GCSGC	7 cut(s)	371, 398, 405, 434, 437, 605, 2208
TfiI	GAWTC	3 cut(s)	376, 784, 2256
Tru1I	TTAA	6 cut(s)	351, 1074, 1083, 1419, 1673, 1886
Tru9I	TTAA	6 cut(s)	351, 1074, 1083, 1419, 1673, 1886
TscAI	CASTG	2 cut(s)	116, 2134
TseFI	GTSAC	2 cut(s)	22, 1449
TseI	GCWGC	9 cut(s)	799, 1300, 1567, 1570, 1687, 1979, 2077, 2199, 2202
Tsp45I	GTSAC	2 cut(s)	22, 1449
TspDTI	ATGAA	5 cut(s)	17, 1674, 1693, 2132, 2280
TspGWI	ACGGA	2 cut(s)	376, 917
TspMI	CCCGGG	1 cut(s)	1488
TspRI	CASTG	2 cut(s)	116, 2134
Tth111I	GACNNNGTC	1 cut(s)	20
Van91I	CCANNNNNTGG	2 cut(s)	238, 1720
VpaK11BI	GGWCC	3 cut(s)	283, 424, 1009
VspI	ATTAAT	1 cut(s)	1083
XagI	CCTNNNNNAGG	1 cut(s)	2225
XapI	RAATTY	1 cut(s)	1520
XceI	RCATGY	2 cut(s)	76, 995
XmaI	CCCGGG	1 cut(s)	1488
XmiI	GTMKAC	1 cut(s)	1135
XspI	CTAG	2 cut(s)	330, 777
ZraI	GACGTC	1 cut(s)	22
ZrmI	AGTACT	1 cut(s)	1916
Zsp2I	ATGCAT	1 cut(s)	1469

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.