Rmu_sc0014208.1_g000003

Golgi vesicle prefusion complex stabilization

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014208.1
Physical Location & Seq
Reverse (-)
5097 .. 6958
1862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014208.1_g000003.1.cds

Sequence Viewer

Length: 1419 bp
atggcgagcaaaagctccaaatccaacaccaagattagcacgatcaagattaacagcccccactgtagcgatatagtctttgatacccccattccttcatgtccttggaaaggtcaccggttcaccattggccttggaccaggagaccccgaggacttgccggaagttttcgacaaggttaggaacaccagtgaaggctttttcaagagttttgtcaagatgttcgacaatttgggtacagacggctacagggacttggctatggagattggggatctatacgctgaccatggtgttttactcccggttgtgaccatgaccggcatcattgatgagtatgctgaagccggcaagaccgctgaggctctccatgtgtaccggataatgttggattctgaaaattgcgcccccaatgcttacacttatagtgtgatcatcagggctctggccaaagaccccaaccccaattttcatggtgttgctaaggagtttgtgatggagatgatcgggaagggatggcagccgaatgccagcacatacaccactgtgtttgaggcatttgcaggtcaggagaagatggaggaggccaagcagtttcttgaggagatgaaaactagtgggtttgtggctgacaagaaagcaatgagggctttcagaaaggttcttaaggttaaagggcctgttgtcaaaagcattttcgatattctatttgataactttgatgactattcagacgagtcagacgatgatgatgatgttgtaaggaagcgcaccaaagacattgactggtcgaagtacccccctgagagctatgctcctttcagcaagaaacaagtcatcgaggacgacccagaaaacccaaaagatttggagcaaatgttcgacacaatgcgcaggactggagcccttgtcagcactgtgaccaagatgctcaacatgctacaaaatgatggattcttgtcccaagtcgaggagatcaggactgctttagaagtggatcataatctgcctgaagtcgtgactcatactggtgtcatcgagatctatggcaggcatgatgaggccaagcatgctctcaaggtgtttttgcgcatgttatcccttggagtttgcccaaacgcatacacttacagtgttttgattaaggcactcgctaaagactccaactttcttggtgatgccaagaattacttactggaaatgatgggtaagggaatgcagcccaatgccaggacatacaccccagtgttcaaggcctttgcccggctagaggaggataatgtgaagaaggggaaggagtttcttatggagatggaagctatggggtttaaggcaaacaagaaggctgtgatggaggttctcaaggacagaaaagggcctgttattaaaacagtcatcaaaattctctttggcaagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

472

Amino Acids

53.17

Weight (kDa)

5.75

Isoelectric Point (pI)

29.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 893, 1091
Acc36I ACCTGC 1 cut(s) 554
AciI CCGC 1 cut(s) 357
AclWI GGATC 2 cut(s) 282, 1005
AcoI YGGCCR 1 cut(s) 447
AcsI RAATTY 1 cut(s) 1401
AcuI CTGAAG 2 cut(s) 363, 1032
AfaI GTAC 3 cut(s) 238, 377, 797
AfiI CCNNNNNNNGG 5 cut(s) 110, 970, 1230, 1263, 1270
AflII CTTAAG 1 cut(s) 665
AgeI ACCGGT 1 cut(s) 117
AgsI TTSAA 2 cut(s) 205, 1252
AhlI ACTAGT 1 cut(s) 614
AjnI CCWGG 2 cut(s) 139, 1229
AleI CACNNNNGTG 2 cut(s) 545, 1244
AloI GAACNNNNNNTCC 2 cut(s) 863, 895
AluBI AGCT 3 cut(s) 15, 810, 1319
AluI AGCT 3 cut(s) 15, 810, 1319
Alw26I GTCTC 1 cut(s) 138
AlwI GGATC 2 cut(s) 282, 1005
Ama87I CYCGRG 1 cut(s) 149
AoxI GGCC 7 cut(s) 130, 447, 585, 677, 1062, 1254, 1376
ApeKI GCWGC 2 cut(s) 520, 1219
ApoI RAATTY 1 cut(s) 1401
AsiGI ACCGGT 1 cut(s) 117
AspLEI GCGC 4 cut(s) 407, 771, 894, 1092
AspS9I GGNCC 3 cut(s) 137, 677, 1376
AsuC2I CCSGG 2 cut(s) 305, 1264
AsuHPI GGTGA 3 cut(s) 107, 115, 1187
AvaI CYCGRG 1 cut(s) 149
AvaII GGWCC 1 cut(s) 137
BalI TGGCCA 1 cut(s) 449
BanII GRGCYC 2 cut(s) 445, 907
BbvCI CCTCAGC 1 cut(s) 360
BbvI GCAGC 2 cut(s) 532, 1231
BccI CCATC 7 cut(s) 490, 510, 571, 944, 1198, 1306, 1345
BceAI ACGGC 1 cut(s) 259
BciT130I CCWGG 2 cut(s) 141, 1231
BclI TGATCA 1 cut(s) 432
BcnI CCSGG 2 cut(s) 305, 1264
BcoDI GTCTC 1 cut(s) 138
BcuI ACTAGT 1 cut(s) 614
BfaI CTAG 2 cut(s) 615, 1268
BfmI CTRYAG 2 cut(s) 64, 247
BfrI CTTAAG 1 cut(s) 665
BfuAI ACCTGC 1 cut(s) 554
BglII AGATCT 1 cut(s) 1041
BisI GCNGC 2 cut(s) 521, 1220
BlsI GCNGC 2 cut(s) 522, 1221
Bme1390I CCNGG 4 cut(s) 141, 305, 1231, 1264
Bme18I GGWCC 1 cut(s) 137
BmeT110I CYCGRG 1 cut(s) 149
BmgT120I GGNCC 3 cut(s) 137, 677, 1376
BmiI GGNNCC 1 cut(s) 904
BmrFI CCNGG 4 cut(s) 141, 305, 1231, 1264
BmrI ACTGGG 1 cut(s) 1238
BmsI GCATC 3 cut(s) 333, 918, 1168
BmuI ACTGGG 1 cut(s) 1238
BplI GAGNNNNNCTC 2 cut(s) 799, 831
BpmI CTGGAG 1 cut(s) 921
Bpu10I CCTNAGC 2 cut(s) 360, 483
BpuEI CTTGAG 3 cut(s) 620, 1061, 1346
BpuMI CCSGG 2 cut(s) 305, 1264
BsaBI GATNNNNATC 1 cut(s) 1002
BsaI GGTCTC 1 cut(s) 138
BsaJI CCNNGG 5 cut(s) 104, 133, 150, 289, 1102
BsaWI WCCGGW 2 cut(s) 117, 378
BsaXI ACNNNNNCTCC 4 cut(s) 863, 893, 894, 924
Bsc4I CCNNNNNNNGG 5 cut(s) 110, 970, 1230, 1263, 1270
Bse118I RCCGGY 3 cut(s) 117, 320, 347
Bse1I ACTGG 6 cut(s) 189, 791, 904, 1033, 1200, 1244
Bse3DI GCAATG 1 cut(s) 648
Bse8I GATNNNNATC 1 cut(s) 1002
BseBI CCWGG 2 cut(s) 141, 1231
BseDI CCNNGG 5 cut(s) 104, 133, 150, 289, 1102
BseGI GGATG 1 cut(s) 521
BseJI GATNNNNATC 1 cut(s) 1002
BseLI CCNNNNNNNGG 5 cut(s) 110, 970, 1230, 1263, 1270
BseMI GCAATG 1 cut(s) 648
BseMII CTCAG 2 cut(s) 351, 795
BseNI ACTGG 6 cut(s) 189, 791, 904, 1033, 1200, 1244
BseRI GAGGAG 4 cut(s) 596, 617, 986, 1286
BseXI GCAGC 2 cut(s) 532, 1231
BshFI GGCC 7 cut(s) 132, 449, 587, 679, 1064, 1256, 1378
BshTI ACCGGT 1 cut(s) 117
BsiHKCI CYCGRG 1 cut(s) 149
BsiSI CCGG 7 cut(s) 118, 161, 305, 321, 348, 379, 1264
BslFI GGGAC 2 cut(s) 266, 946
BslI CCNNNNNNNGG 5 cut(s) 110, 970, 1230, 1263, 1270
BsmAI GTCTC 1 cut(s) 138
BsmFI GGGAC 2 cut(s) 266, 946
BsmI GAATGC 2 cut(s) 532, 1221
BsnI GGCC 7 cut(s) 132, 449, 587, 679, 1064, 1256, 1378
Bso31I GGTCTC 1 cut(s) 138
BsoBI CYCGRG 1 cut(s) 149
Bsp1286I GDGCHC 2 cut(s) 445, 907
Bsp143I GATC 7 cut(s) 42, 274, 432, 504, 975, 997, 1041
Bsp19I CCATGG 1 cut(s) 289
BspACI CCGC 1 cut(s) 357
BspANI GGCC 7 cut(s) 132, 449, 587, 679, 1064, 1256, 1378
BspCNI CTCAG 2 cut(s) 352, 796
BspLI GGNNCC 1 cut(s) 904
BspMI ACCTGC 1 cut(s) 554
BspPI GGATC 2 cut(s) 282, 1005
BspTI CTTAAG 1 cut(s) 665
BspTNI GGTCTC 1 cut(s) 138
BsrDI GCAATG 1 cut(s) 648
BsrFI RCCGGY 3 cut(s) 117, 320, 347
BsrI ACTGG 6 cut(s) 189, 791, 904, 1033, 1200, 1244
BssAI RCCGGY 3 cut(s) 117, 320, 347
BssECI CCNNGG 5 cut(s) 104, 133, 150, 289, 1102
BssMI GATC 7 cut(s) 42, 274, 432, 504, 975, 997, 1041
BssT1I CCWWGG 4 cut(s) 104, 133, 289, 1102
Bst2UI CCWGG 2 cut(s) 141, 1231
Bst4CI ACNGT 5 cut(s) 65, 547, 919, 1133, 1393
BstAFI CTTAAG 1 cut(s) 665
BstC8I GCNNGC 5 cut(s) 7, 349, 532, 1052, 1071
BstDEI CTNAG 3 cut(s) 360, 483, 804
BstDSI CCRYGG 1 cut(s) 289
BstEII GGTNACC 1 cut(s) 113
BstENI CCTNNNNNAGG 1 cut(s) 108
BstF5I GGATG 1 cut(s) 521
BstHHI GCGC 4 cut(s) 407, 771, 894, 1092
BstKTI GATC 7 cut(s) 45, 277, 435, 507, 978, 1000, 1044
BstMAI GTCTC 1 cut(s) 138
BstMBI GATC 7 cut(s) 42, 274, 432, 504, 975, 997, 1041
BstMWI GCNNNNNNNGC 4 cut(s) 413, 647, 937, 1070
BstNI CCWGG 2 cut(s) 141, 1231
BstNSI RCATGY 3 cut(s) 940, 1073, 1096
BstPI GGTNACC 1 cut(s) 113
BstSCI CCNGG 4 cut(s) 139, 303, 1229, 1262
BstSFI CTRYAG 2 cut(s) 64, 247
BstV1I GCAGC 2 cut(s) 532, 1231
BstX2I RGATCY 2 cut(s) 274, 1041
BstYI RGATCY 2 cut(s) 274, 1041
BsuRI GGCC 7 cut(s) 132, 449, 587, 679, 1064, 1256, 1378
BtgI CCRYGG 1 cut(s) 289
BtsCI GGATG 1 cut(s) 521
BtsIMutI CAGTG 6 cut(s) 61, 196, 543, 915, 1138, 1251
BveI ACCTGC 1 cut(s) 554
Cac8I GCNNGC 5 cut(s) 7, 349, 532, 1052, 1071
CfoI GCGC 4 cut(s) 407, 771, 894, 1092
Cfr10I RCCGGY 3 cut(s) 117, 320, 347
Cfr13I GGNCC 3 cut(s) 137, 677, 1376
Csp6I GTAC 3 cut(s) 237, 376, 796
CspAI ACCGGT 1 cut(s) 117
CspCI CAANNNNNGTGG 2 cut(s) 532, 567
CviAII CATG 9 cut(s) 99, 290, 316, 371, 473, 937, 1055, 1070, 1093
CviQI GTAC 3 cut(s) 237, 376, 796
DdeI CTNAG 3 cut(s) 360, 483, 804
DpnI GATC 7 cut(s) 44, 276, 434, 506, 977, 999, 1043
DpnII GATC 7 cut(s) 42, 274, 432, 504, 975, 997, 1041
EaeI YGGCCR 1 cut(s) 447
Eco130I CCWWGG 4 cut(s) 104, 133, 289, 1102
Eco147I AGGCCT 1 cut(s) 1256
Eco24I GRGCYC 2 cut(s) 445, 907
Eco31I GGTCTC 1 cut(s) 138
Eco47I GGWCC 1 cut(s) 137
Eco57I CTGAAG 2 cut(s) 363, 1032
Eco88I CYCGRG 1 cut(s) 149
Eco91I GGTNACC 1 cut(s) 113
EcoNI CCTNNNNNAGG 1 cut(s) 108
EcoO109I RGGNCCY 2 cut(s) 677, 1376
EcoO65I GGTNACC 1 cut(s) 113
EcoRII CCWGG 2 cut(s) 139, 1229
EcoT14I CCWWGG 4 cut(s) 104, 133, 289, 1102
EcoT38I GRGCYC 2 cut(s) 445, 907
ErhI CCWWGG 4 cut(s) 104, 133, 289, 1102
FaeI CATG 9 cut(s) 102, 293, 319, 374, 476, 940, 1058, 1073, 1096
FalI AAGNNNNNCTT 2 cut(s) 1175, 1207
FaqI GGGAC 2 cut(s) 266, 946
FatI CATG 9 cut(s) 98, 289, 315, 370, 472, 936, 1054, 1069, 1092
FbaI TGATCA 1 cut(s) 432
Fnu4HI GCNGC 2 cut(s) 521, 1220
FokI GGATG 1 cut(s) 528
FriOI GRGCYC 2 cut(s) 445, 907
Fsp4HI GCNGC 2 cut(s) 521, 1220
FspBI CTAG 2 cut(s) 615, 1268
FspI TGCGCA 2 cut(s) 893, 1091
GlaI GCGC 4 cut(s) 406, 770, 893, 1091
GluI GCNGC 2 cut(s) 521, 1220
GsuI CTGGAG 1 cut(s) 921
HaeIII GGCC 7 cut(s) 132, 449, 587, 679, 1064, 1256, 1378
HapII CCGG 7 cut(s) 118, 161, 305, 321, 348, 379, 1264
HhaI GCGC 4 cut(s) 407, 771, 894, 1092
Hin1II CATG 9 cut(s) 102, 293, 319, 374, 476, 940, 1058, 1073, 1096
Hin6I GCGC 4 cut(s) 405, 769, 892, 1090
HinP1I GCGC 4 cut(s) 405, 769, 892, 1090
HinfI GANTC 5 cut(s) 392, 737, 954, 1021, 1160
HpaII CCGG 7 cut(s) 118, 161, 305, 321, 348, 379, 1264
HphI GGTGA 3 cut(s) 107, 115, 1187
Hpy166II GTNNAC 2 cut(s) 123, 376
Hpy188I TCNGA 4 cut(s) 397, 656, 733, 742
Hpy188III TCNNGA 9 cut(s) 46, 205, 217, 508, 569, 599, 979, 1018, 1039
Hpy8I GTNNAC 2 cut(s) 123, 376
HpyAV CCTTC 6 cut(s) 105, 188, 505, 1282, 1288, 1336
HpyCH4III ACNGT 5 cut(s) 65, 547, 919, 1133, 1393
HpyCH4V TGCA 2 cut(s) 563, 1219
HpyF10VI GCNNNNNNNGC 4 cut(s) 413, 647, 937, 1070
HpyF3I CTNAG 3 cut(s) 360, 483, 804
Hsp92II CATG 9 cut(s) 102, 293, 319, 374, 476, 940, 1058, 1073, 1096
HspAI GCGC 4 cut(s) 405, 769, 892, 1090
KroI GCCGGC 1 cut(s) 347
KroNI GCCGGC 1 cut(s) 349
Ksp22I TGATCA 1 cut(s) 432
Kzo9I GATC 7 cut(s) 42, 274, 432, 504, 975, 997, 1041
LmnI GCTCC 4 cut(s) 20, 820, 871, 902
Lsp1109I GCAGC 2 cut(s) 532, 1231
LweI GCATC 3 cut(s) 333, 918, 1168
MaeI CTAG 2 cut(s) 615, 1268
MaeIII GTNAC 4 cut(s) 113, 310, 919, 1018
MalI GATC 7 cut(s) 44, 276, 434, 506, 977, 999, 1043
MboI GATC 7 cut(s) 42, 274, 432, 504, 975, 997, 1041
MboII GAAGA 2 cut(s) 586, 1297
MflI RGATCY 2 cut(s) 274, 1041
MhlI GDGCHC 2 cut(s) 445, 907
MlsI TGGCCA 1 cut(s) 449
MluCI AATT 5 cut(s) 229, 400, 466, 1186, 1401
MluNI TGGCCA 1 cut(s) 449
MlyI GAGTC 3 cut(s) 746, 1015, 1154
MmeI TCCRAC 3 cut(s) 48, 369, 1188
Mox20I TGGCCA 1 cut(s) 449
MroNI GCCGGC 1 cut(s) 347
MscI TGGCCA 1 cut(s) 449
MseI TTAA 6 cut(s) 51, 666, 672, 1143, 1329, 1386
MslI CAYNNNNRTG 3 cut(s) 545, 1029, 1244
Msp20I TGGCCA 1 cut(s) 449
MspA1I CMGCKG 1 cut(s) 359
MspCI CTTAAG 1 cut(s) 665
MspI CCGG 7 cut(s) 118, 161, 305, 321, 348, 379, 1264
MspR9I CCNGG 4 cut(s) 141, 305, 1231, 1264
Mva1269I GAATGC 2 cut(s) 532, 1221
MvaI CCWGG 2 cut(s) 141, 1231
MwoI GCNNNNNNNGC 4 cut(s) 413, 647, 937, 1070
NaeI GCCGGC 1 cut(s) 349
NciI CCSGG 2 cut(s) 305, 1264
NcoI CCATGG 1 cut(s) 289
NdeII GATC 7 cut(s) 42, 274, 432, 504, 975, 997, 1041
NgoMIV GCCGGC 1 cut(s) 347
NlaIII CATG 9 cut(s) 102, 293, 319, 374, 476, 940, 1058, 1073, 1096
NlaIV GGNNCC 1 cut(s) 904
NmuCI GTSAC 4 cut(s) 113, 310, 919, 1018
NsbI TGCGCA 2 cut(s) 893, 1091
NspI RCATGY 3 cut(s) 940, 1073, 1096
OliI CACNNNNGTG 2 cut(s) 545, 1244
PaeI GCATGC 1 cut(s) 1073
PceI AGGCCT 1 cut(s) 1256
PcsI WCGNNNNNNNCGW 1 cut(s) 741
PctI GAATGC 2 cut(s) 532, 1221
PdiI GCCGGC 1 cut(s) 349
PfeI GAWTC 2 cut(s) 392, 954
PinAI ACCGGT 1 cut(s) 117
PkrI GCNGC 2 cut(s) 522, 1221
PleI GAGTC 3 cut(s) 745, 1015, 1154
PpsI GAGTC 3 cut(s) 745, 1015, 1154
Psp6I CCWGG 2 cut(s) 139, 1229
PspEI GGTNACC 1 cut(s) 113
PspGI CCWGG 2 cut(s) 139, 1229
PspN4I GGNNCC 1 cut(s) 904
PspPI GGNCC 3 cut(s) 137, 677, 1376
PsuI RGATCY 2 cut(s) 274, 1041
RsaI GTAC 3 cut(s) 238, 377, 797
RsaNI GTAC 3 cut(s) 237, 376, 796
RseI CAYNNNNRTG 3 cut(s) 545, 1029, 1244
SaqAI TTAA 6 cut(s) 51, 666, 672, 1143, 1329, 1386
SatI GCNGC 2 cut(s) 521, 1220
Sau3AI GATC 7 cut(s) 42, 274, 432, 504, 975, 997, 1041
Sau96I GGNCC 3 cut(s) 137, 677, 1376
SchI GAGTC 3 cut(s) 746, 1015, 1154
ScrFI CCNGG 4 cut(s) 141, 305, 1231, 1264
SduI GDGCHC 2 cut(s) 445, 907
SfaNI GCATC 3 cut(s) 333, 918, 1168
SfcI CTRYAG 2 cut(s) 64, 247
SinI GGWCC 1 cut(s) 137
SmiMI CAYNNNNRTG 3 cut(s) 545, 1029, 1244
SmlI CTYRAG 4 cut(s) 599, 665, 1076, 1361
SmoI CTYRAG 4 cut(s) 599, 665, 1076, 1361
SpeI ACTAGT 1 cut(s) 614
SphI GCATGC 1 cut(s) 1073
Sse9I AATT 5 cut(s) 229, 400, 466, 1186, 1401
SseBI AGGCCT 1 cut(s) 1256
SsiI CCGC 1 cut(s) 357
SspMI CTAG 2 cut(s) 615, 1268
StuI AGGCCT 1 cut(s) 1256
StyD4I CCNGG 4 cut(s) 139, 303, 1229, 1262
StyI CCWWGG 4 cut(s) 104, 133, 289, 1102
TaaI ACNGT 5 cut(s) 65, 547, 919, 1133, 1393
TaqI TCGA 8 cut(s) 171, 225, 699, 791, 840, 882, 969, 1038
TasI AATT 5 cut(s) 229, 400, 466, 1186, 1401
TfiI GAWTC 2 cut(s) 392, 954
Tru1I TTAA 6 cut(s) 51, 666, 672, 1143, 1329, 1386
Tru9I TTAA 6 cut(s) 51, 666, 672, 1143, 1329, 1386
TscAI CASTG 6 cut(s) 68, 196, 550, 922, 1138, 1251
TseFI GTSAC 4 cut(s) 113, 310, 919, 1018
TseI GCWGC 2 cut(s) 520, 1219
Tsp45I GTSAC 4 cut(s) 113, 310, 919, 1018
TspDTI ATGAA 3 cut(s) 87, 461, 623
TspRI CASTG 6 cut(s) 68, 196, 550, 922, 1138, 1251
Vha464I CTTAAG 1 cut(s) 665
VpaK11BI GGWCC 1 cut(s) 137
XagI CCTNNNNNAGG 1 cut(s) 108
XapI RAATTY 1 cut(s) 1401
XceI RCATGY 3 cut(s) 940, 1073, 1096
XspI CTAG 2 cut(s) 615, 1268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.