Rorug03G0034200

Golgi vesicle prefusion complex stabilization

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0001723
Physical Location & Seq
Reverse (-)
2750564 .. 2753185
2622 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0034200.1

Sequence Viewer

Length: 1926 bp
ATGTTCGATGGAGTCCCAGCTGAGCAATTGCACCAATTCATAGCAGCCTCAAGAACTTCACTCCCTCTCCCTCTTCCCAATATTCCTCTCTCTTCCTTCCCTAATCTCCAACCCTTCGATCATCATCATCATCATCATAACTACAACATCATCAACCCTCCTCCCCCAACACCTCAAGAACTTGTGCAGCTTCAGCCACCACCTCACAATCAGCTTCTGCTTCCGTCCGTAGTACTTCACCGCCGCGCAAATGATCAAGAGAAGCAAGAAAACAGCACTACCTTGGTCTTGCCCTCATCGAATTTGGAGATCGAAAGAGAACGAACCGCATCGATGCCACCTGAATTGCCTAGCGATCCCTGGAGTAACGATGAGCTGCTTGCACTGCTCCGGATCAGATCTACCATGGAGAATTGGTTCCCTGAGTTCACTTGGGAACATGTCTCAAGTTTCTTTATTTATTTAGGGGATCGAGATCGAATGCTTAAGAGTCGTGAAATAAATGCTTTGCTCAATAATATTCTGCTCTTACTGAACGAGTTTGTGATGGGATGGATGAGCTGCAGAAAGCTGGCAGAGGTTGGCTTTAAAAGGAGTGCAGAGAAGTGCAAGGAGAAGTTTGAAGAGGAAAGCAGGTACTTCAACAATATCAACTTCAACAAGAACTTCAGGTTTCTTAGTGAGCTTGAGCAGCTCTATCAACCACCAGTTGAGCCACCTCAAAACGTAGCTGAAGATCAACCAGAAAAGAATACCGAAAAAGTAGTAGAAGTTGAAAAGCCAAGTGAAGAACTAGGAAACCAAGATAAAGGCCAAACAGCTTTGGATCCTCAAGAGTCACCAAGCAATGATCAAACAGTTAGTGAGACACAGGTAGAGATTGGTAGAGCAAAGAGCAACAACAAGAAGAGGAAGAGGCAGAGGAGATTTGAAATGCTGAAAGGTTTCTGTGAAGACATAGTGAACAAGTTGATGGCTCAGCAAGAAGAGACTCACAGTAAGCTACTTGAAGACATGGTGAGGAGAGATGAAGAGAAGCTTGCAAAGGAAGAAGCTTGGAAGAAGCAAGAGATGGATAGGATGAACAAGGAGCTTGAAACCATGGCACATGAACAAGCTGTTGCAGGAGATAGACAAGCTACAATTATTCAGTTCTTGAAGAAATTCACATCATCAGCTAGTACTAGTAGTAGTACTAACCCTAGTAATGGCCAAAAGGAAAATGATCAAGAACCAATTACATCATCCACAATGGTCCCATCTGCAAGCAATGTTCACAAGTCTACTACTACTACTACTTCTTTCCACACCCAAAATAATCCAAGCACACCCACTTCACTGACCGAAGCCATTGCACCCCAAAGCCCTAGTTCAAGCACCCTAAGCATCAATCCAAAACTGCCCATTTCATCTCCGCCTCCTGAAAACCCTAGCTCCGATCATCTCAAAACCCAAAACCCTAGCTCGAACGACAAAGCGCAAGACCTTGGAAAGAGGTGGCCGAGGGACGAAGTCTTGGCTCTGATCAACCTCCGGTGCAGTCTCTTCAACAATGGCGATCAACAAGACAAGGATAAAGATGGAGGAGCCGTCAAGGCTCCACTGTGGGAGAGAATCTCACAAGGGATGTCAGAGTTGGGTTACAAGAGAAACGCCAAGAGGTGTAAAGAGAAATGGGAGAATATCAATAAGTACTTTAGGAAAACAAAGGATGTGAACAAGAAGAGGTCGCTTGACTCGAGGACTTGCCCTTATTTTCATCAACTAAGCACTTTGTACAACCAAGGCATACTCGTACCGCCTTCCGATCACCAAGCGGCGGCGCCGGAAAACCGCTCACCGGAGAACCAATCGTCTCTAGCTGAAGGTGAGAAAAACAATATGGTACAGCAAGCTGTACCGGCAGCTTTTGATTTTGAATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

641

Amino Acids

73.12

Weight (kDa)

5.94

Isoelectric Point (pI)

67.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 498 - 591 9.4e-21 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 624
AccB1I GGYRCC 1 cut(s) 1822
AccBSI CCGCTC 1 cut(s) 1836
AccI GTMKAC 1 cut(s) 1283
AccII CGCG 1 cut(s) 246
AccIII TCCGGA 1 cut(s) 390
AciI CCGC 8 cut(s) 241, 244, 327, 1415, 1799, 1817, 1820, 1834
AclWI GGATC 5 cut(s) 350, 401, 477, 821, 834
AcoI YGGCCR 2 cut(s) 1210, 1499
AcsI RAATTY 3 cut(s) 301, 1163, 1919
AcuI CTGAAG 4 cut(s) 176, 652, 753, 1884
AcyI GRCGYC 1 cut(s) 1823
AfaI GTAC 9 cut(s) 234, 638, 1183, 1195, 1694, 1778, 1797, 1887, 1899
AfiI CCNNNNNNNGG 3 cut(s) 1208, 1819, 1840
AflII CTTAAG 1 cut(s) 485
AflIII ACRYGT 1 cut(s) 439
AhlI ACTAGT 1 cut(s) 1184
AjnI CCWGG 1 cut(s) 359
AloI GAACNNNNNNTCC 2 cut(s) 401, 433
Alw26I GTCTC 5 cut(s) 448, 860, 983, 1547, 1860
AlwI GGATC 5 cut(s) 350, 401, 477, 821, 834
AlwNI CAGNNNCTG 1 cut(s) 217
Ama87I CYCGRG 1 cut(s) 1738
Aor13HI TCCGGA 1 cut(s) 390
AoxI GGCC 3 cut(s) 811, 1210, 1499
ApeKI GCWGC 6 cut(s) 44, 187, 376, 561, 691, 1904
ApoI RAATTY 3 cut(s) 301, 1163, 1919
Asp700I GAANNNNTTC 3 cut(s) 416, 944, 1163
AspLEI GCGC 3 cut(s) 248, 1480, 1825
AspS9I GGNCC 1 cut(s) 1255
AsuHPI GGTGA 6 cut(s) 230, 831, 1030, 1802, 1830, 1880
AvaI CYCGRG 1 cut(s) 1738
AvaII GGWCC 1 cut(s) 1255
BalI TGGCCA 1 cut(s) 1212
BamHI GGATCC 1 cut(s) 826
BanI GGYRCC 1 cut(s) 1822
BbsI GAAGAC 2 cut(s) 960, 1017
BbvI GCAGC 6 cut(s) 56, 199, 363, 548, 703, 1916
BccI CCATC 7 cut(s) 2, 541, 546, 967, 1066, 1267, 1574
BceAI ACGGC 1 cut(s) 1574
BcgI CGANNNNNNTGC 2 cut(s) 1334, 1368
BciT130I CCWGG 1 cut(s) 361
BclI TGATCA 4 cut(s) 253, 850, 1225, 1524
BcoDI GTCTC 5 cut(s) 448, 860, 983, 1547, 1860
BcuI ACTAGT 1 cut(s) 1184
BfaI CTAG 9 cut(s) 351, 794, 1179, 1185, 1203, 1368, 1431, 1461, 1859
BfmI CTRYAG 1 cut(s) 562
BfoI RGCGCY 1 cut(s) 1826
BfrI CTTAAG 1 cut(s) 485
BfuAI ACCTGC 1 cut(s) 624
BglI GCCNNNNNGGC 1 cut(s) 1595
BglII AGATCT 1 cut(s) 398
BisI GCNGC 9 cut(s) 45, 188, 244, 377, 562, 692, 1818, 1821, 1905
BlpI GCTNAGC 2 cut(s) 21, 978
BlsI GCNGC 9 cut(s) 46, 189, 245, 378, 563, 693, 1819, 1822, 1906
BmcAI AGTACT 4 cut(s) 234, 1183, 1195, 1694
Bme1390I CCNGG 1 cut(s) 361
Bme18I GGWCC 1 cut(s) 1255
BmeT110I CYCGRG 1 cut(s) 1738
BmgT120I GGNCC 1 cut(s) 1255
BmiI GGNNCC 6 cut(s) 419, 828, 1257, 1588, 1599, 1824
BmrFI CCNGG 1 cut(s) 361
BmsI GCATC 3 cut(s) 324, 338, 1395
BpiI GAAGAC 2 cut(s) 960, 1017
BplI GAGNNNNNCTC 2 cut(s) 1601, 1633
BpmI CTGGAG 1 cut(s) 382
Bpu10I CCTNAGC 1 cut(s) 1382
Bpu1102I GCTNAGC 2 cut(s) 21, 978
BpuEI CTTGAG 5 cut(s) 34, 159, 430, 707, 816
Bsa29I ATCGAT 1 cut(s) 332
BsaBI GATNNNNATC 2 cut(s) 123, 474
BsaHI GRCGYC 1 cut(s) 1823
BsaJI CCNNGG 7 cut(s) 282, 359, 405, 1101, 1486, 1502, 1783
BsaWI WCCGGW 3 cut(s) 390, 1533, 1840
BsaXI ACNNNNNCTCC 8 cut(s) 51, 81, 401, 431, 1418, 1448, 1575, 1605
Bsc4I CCNNNNNNNGG 3 cut(s) 1208, 1819, 1840
Bse118I RCCGGY 1 cut(s) 1900
Bse1I ACTGG 1 cut(s) 707
Bse3DI GCAATG 3 cut(s) 853, 1276, 1350
Bse8I GATNNNNATC 2 cut(s) 123, 474
BseAI TCCGGA 1 cut(s) 390
BseBI CCWGG 1 cut(s) 361
BseCI ATCGAT 1 cut(s) 332
BseDI CCNNGG 7 cut(s) 282, 359, 405, 1101, 1486, 1502, 1783
BseGI GGATG 6 cut(s) 557, 561, 1086, 1244, 1632, 1717
BseJI GATNNNNATC 2 cut(s) 123, 474
BseLI CCNNNNNNNGG 3 cut(s) 1208, 1819, 1840
BseMI GCAATG 3 cut(s) 853, 1276, 1350
BseMII CTCAG 3 cut(s) 12, 414, 992
BseNI ACTGG 1 cut(s) 707
BseRI GAGGAG 4 cut(s) 150, 937, 1036, 1599
BseXI GCAGC 6 cut(s) 56, 199, 363, 548, 703, 1916
BseYI CCCAGC 1 cut(s) 16
BsgI GTGCAG 3 cut(s) 206, 618, 1558
Bsh1236I CGCG 1 cut(s) 246
BshFI GGCC 3 cut(s) 813, 1212, 1501
BshNI GGYRCC 1 cut(s) 1822
BshVI ATCGAT 1 cut(s) 332
BsiHKCI CYCGRG 1 cut(s) 1738
BsiSI CCGG 5 cut(s) 391, 1534, 1826, 1841, 1901
BslFI GGGAC 2 cut(s) 1241, 1520
BslI CCNNNNNNNGG 3 cut(s) 1208, 1819, 1840
BsmAI GTCTC 5 cut(s) 448, 860, 983, 1547, 1860
BsmBI CGTCTC 1 cut(s) 1860
BsmFI GGGAC 2 cut(s) 1241, 1520
BsmI GAATGC 1 cut(s) 486
BsnI GGCC 3 cut(s) 813, 1212, 1501
BsoBI CYCGRG 1 cut(s) 1738
Bsp13I TCCGGA 1 cut(s) 390
Bsp1407I TGTACA 1 cut(s) 1776
Bsp1720I GCTNAGC 2 cut(s) 21, 978
Bsp19I CCATGG 2 cut(s) 405, 1101
BspACI CCGC 8 cut(s) 241, 244, 327, 1415, 1799, 1817, 1820, 1834
BspANI GGCC 3 cut(s) 813, 1212, 1501
BspCNI CTCAG 3 cut(s) 13, 415, 991
BspDI ATCGAT 1 cut(s) 332
BspEI TCCGGA 1 cut(s) 390
BspFNI CGCG 1 cut(s) 246
BspLI GGNNCC 6 cut(s) 419, 828, 1257, 1588, 1599, 1824
BspMAI CTGCAG 1 cut(s) 566
BspMI ACCTGC 1 cut(s) 624
BspPI GGATC 5 cut(s) 350, 401, 477, 821, 834
BspT107I GGYRCC 1 cut(s) 1822
BspTI CTTAAG 1 cut(s) 485
BsrBI CCGCTC 1 cut(s) 1836
BsrDI GCAATG 3 cut(s) 853, 1276, 1350
BsrFI RCCGGY 1 cut(s) 1900
BsrGI TGTACA 1 cut(s) 1776
BsrI ACTGG 1 cut(s) 707
BssAI RCCGGY 1 cut(s) 1900
BssECI CCNNGG 7 cut(s) 282, 359, 405, 1101, 1486, 1502, 1783
BssNI GRCGYC 1 cut(s) 1823
BssT1I CCWWGG 5 cut(s) 282, 405, 1101, 1486, 1783
Bst2UI CCWGG 1 cut(s) 361
Bst4CI ACNGT 3 cut(s) 859, 998, 1605
Bst6I CTCTTC 9 cut(s) 78, 97, 618, 902, 908, 981, 1026, 1550, 1718
BstACI GRCGYC 1 cut(s) 1823
BstAFI CTTAAG 1 cut(s) 485
BstAUI TGTACA 1 cut(s) 1776
BstC8I GCNNGC 5 cut(s) 381, 573, 1041, 1267, 1893
BstDEI CTNAG 6 cut(s) 21, 423, 677, 978, 1382, 1766
BstDSI CCRYGG 2 cut(s) 405, 1101
BstF5I GGATG 6 cut(s) 557, 561, 1086, 1244, 1632, 1717
BstFNI CGCG 1 cut(s) 246
BstH2I RGCGCY 1 cut(s) 1826
BstHHI GCGC 3 cut(s) 248, 1480, 1825
BstMAI GTCTC 5 cut(s) 448, 860, 983, 1547, 1860
BstMWI GCNNNNNNNGC 6 cut(s) 193, 385, 691, 1383, 1595, 1901
BstNI CCWGG 1 cut(s) 361
BstNSI RCATGY 1 cut(s) 443
BstSCI CCNGG 1 cut(s) 359
BstSFI CTRYAG 1 cut(s) 562
BstUI CGCG 1 cut(s) 246
BstV1I GCAGC 6 cut(s) 56, 199, 363, 548, 703, 1916
BstV2I GAAGAC 2 cut(s) 960, 1017
BstX2I RGATCY 2 cut(s) 398, 826
BstYI RGATCY 2 cut(s) 398, 826
Bsu15I ATCGAT 1 cut(s) 332
BsuRI GGCC 3 cut(s) 813, 1212, 1501
BsuTUI ATCGAT 1 cut(s) 332
BtgI CCRYGG 2 cut(s) 405, 1101
BtsCI GGATG 6 cut(s) 557, 561, 1086, 1244, 1632, 1717
BtsI GCAGTG 1 cut(s) 383
BtsIMutI CAGTG 3 cut(s) 383, 1337, 1601
BveI ACCTGC 1 cut(s) 624
Cac8I GCNNGC 5 cut(s) 381, 573, 1041, 1267, 1893
CaiI CAGNNNCTG 1 cut(s) 217
CfoI GCGC 3 cut(s) 248, 1480, 1825
Cfr10I RCCGGY 1 cut(s) 1900
Cfr13I GGNCC 1 cut(s) 1255
ClaI ATCGAT 1 cut(s) 332
Csp6I GTAC 9 cut(s) 233, 637, 1182, 1194, 1693, 1777, 1796, 1886, 1898
CspCI CAANNNNNGTGG 2 cut(s) 327, 362
CviAII CATG 5 cut(s) 406, 440, 1015, 1102, 1109
CviQI GTAC 9 cut(s) 233, 637, 1182, 1194, 1693, 1777, 1796, 1886, 1898
DdeI CTNAG 6 cut(s) 21, 423, 677, 978, 1382, 1766
DinI GGCGCC 1 cut(s) 1824
DraI TTTAAA 1 cut(s) 589
EaeI YGGCCR 2 cut(s) 1210, 1499
Eam1104I CTCTTC 9 cut(s) 78, 97, 618, 902, 908, 981, 1026, 1550, 1718
EarI CTCTTC 9 cut(s) 78, 97, 618, 902, 908, 981, 1026, 1550, 1718
EciI GGCGGA 1 cut(s) 1404
Eco130I CCWWGG 5 cut(s) 282, 405, 1101, 1486, 1783
Eco47I GGWCC 1 cut(s) 1255
Eco57I CTGAAG 4 cut(s) 176, 652, 753, 1884
Eco88I CYCGRG 1 cut(s) 1738
EcoRI GAATTC 1 cut(s) 1919
EcoRII CCWGG 1 cut(s) 359
EcoT14I CCWWGG 5 cut(s) 282, 405, 1101, 1486, 1783
EgeI GGCGCC 1 cut(s) 1824
EheI GGCGCC 1 cut(s) 1824
ErhI CCWWGG 5 cut(s) 282, 405, 1101, 1486, 1783
Esp3I CGTCTC 1 cut(s) 1860
FaeI CATG 5 cut(s) 409, 443, 1018, 1105, 1112
FalI AAGNNNNNCTT 2 cut(s) 1023, 1055
FaqI GGGAC 2 cut(s) 1241, 1520
FatI CATG 5 cut(s) 405, 439, 1014, 1101, 1108
FbaI TGATCA 4 cut(s) 253, 850, 1225, 1524
FblI GTMKAC 1 cut(s) 1283
Fnu4HI GCNGC 9 cut(s) 45, 188, 244, 377, 562, 692, 1818, 1821, 1905
FokI GGATG 6 cut(s) 564, 568, 1093, 1231, 1639, 1724
Fsp4HI GCNGC 9 cut(s) 45, 188, 244, 377, 562, 692, 1818, 1821, 1905
FspBI CTAG 9 cut(s) 351, 794, 1179, 1185, 1203, 1368, 1431, 1461, 1859
GlaI GCGC 3 cut(s) 247, 1479, 1824
GluI GCNGC 9 cut(s) 45, 188, 244, 377, 562, 692, 1818, 1821, 1905
GsaI CCCAGC 1 cut(s) 20
GsuI CTGGAG 1 cut(s) 382
HaeII RGCGCY 1 cut(s) 1826
HaeIII GGCC 3 cut(s) 813, 1212, 1501
HapII CCGG 5 cut(s) 391, 1534, 1826, 1841, 1901
HhaI GCGC 3 cut(s) 248, 1480, 1825
Hin1I GRCGYC 1 cut(s) 1823
Hin1II CATG 5 cut(s) 409, 443, 1018, 1105, 1112
Hin6I GCGC 3 cut(s) 246, 1478, 1823
HinP1I GCGC 3 cut(s) 246, 1478, 1823
HindIII AAGCTT 2 cut(s) 1037, 1053
HinfI GANTC 6 cut(s) 12, 490, 836, 991, 1614, 1736
HpaII CCGG 5 cut(s) 391, 1534, 1826, 1841, 1901
HphI GGTGA 6 cut(s) 230, 831, 1030, 1802, 1830, 1880
Hpy166II GTNNAC 5 cut(s) 429, 964, 1276, 1284, 1717
Hpy188I TCNGA 6 cut(s) 398, 1438, 1524, 1633, 1807, 1925
Hpy8I GTNNAC 5 cut(s) 429, 964, 1276, 1284, 1717
HpyAV CCTTC 4 cut(s) 106, 124, 1812, 1859
HpyCH4III ACNGT 3 cut(s) 859, 998, 1605
HpyCH4IV ACGT 1 cut(s) 726
HpyF10VI GCNNNNNNNGC 6 cut(s) 193, 385, 691, 1383, 1595, 1901
HpyF3I CTNAG 6 cut(s) 21, 423, 677, 978, 1382, 1766
HpySE526I ACGT 1 cut(s) 726
Hsp92I GRCGYC 1 cut(s) 1823
Hsp92II CATG 5 cut(s) 409, 443, 1018, 1105, 1112
HspAI GCGC 3 cut(s) 246, 1478, 1823
KasI GGCGCC 1 cut(s) 1822
Kpn2I TCCGGA 1 cut(s) 390
Ksp22I TGATCA 4 cut(s) 253, 850, 1225, 1524
LmnI GCTCC 5 cut(s) 393, 1090, 1439, 1586, 1603
Lsp1109I GCAGC 6 cut(s) 56, 199, 363, 548, 703, 1916
LweI GCATC 3 cut(s) 324, 338, 1395
MaeI CTAG 9 cut(s) 351, 794, 1179, 1185, 1203, 1368, 1431, 1461, 1859
MaeII ACGT 1 cut(s) 726
MaeIII GTNAC 3 cut(s) 365, 837, 1640
MbiI CCGCTC 1 cut(s) 1836
MfeI CAATTG 1 cut(s) 26
MflI RGATCY 2 cut(s) 398, 826
MlsI TGGCCA 1 cut(s) 1212
MluCI AATT 9 cut(s) 26, 35, 301, 344, 412, 1143, 1163, 1236, 1919
MluNI TGGCCA 1 cut(s) 1212
Mly113I GGCGCC 1 cut(s) 1823
MlyI GAGTC 5 cut(s) 21, 499, 845, 985, 1730
MmeI TCCRAC 1 cut(s) 133
Mox20I TGGCCA 1 cut(s) 1212
MroI TCCGGA 1 cut(s) 390
MroXI GAANNNNTTC 3 cut(s) 416, 944, 1163
MscI TGGCCA 1 cut(s) 1212
MseI TTAA 2 cut(s) 486, 588
Msp20I TGGCCA 1 cut(s) 1212
MspA1I CMGCKG 1 cut(s) 20
MspCI CTTAAG 1 cut(s) 485
MspI CCGG 5 cut(s) 391, 1534, 1826, 1841, 1901
MspR9I CCNGG 1 cut(s) 361
MunI CAATTG 1 cut(s) 26
Mva1269I GAATGC 1 cut(s) 486
MvaI CCWGG 1 cut(s) 361
MvnI CGCG 1 cut(s) 246
MwoI GCNNNNNNNGC 6 cut(s) 193, 385, 691, 1383, 1595, 1901
NarI GGCGCC 1 cut(s) 1823
NcoI CCATGG 2 cut(s) 405, 1101
NlaIII CATG 5 cut(s) 409, 443, 1018, 1105, 1112
NlaIV GGNNCC 6 cut(s) 419, 828, 1257, 1588, 1599, 1824
NmeAIII GCCGAG 1 cut(s) 1527
NmuCI GTSAC 1 cut(s) 837
NspI RCATGY 1 cut(s) 443
PaeR7I CTCGAG 1 cut(s) 1738
PciI ACATGT 1 cut(s) 439
PcsI WCGNNNNNNNCGW 1 cut(s) 1736
PctI GAATGC 1 cut(s) 486
PdmI GAANNNNTTC 3 cut(s) 416, 944, 1163
PfeI GAWTC 1 cut(s) 1614
PflFI GACNNNGTC 1 cut(s) 1511
PkrI GCNGC 9 cut(s) 46, 189, 245, 378, 563, 693, 1819, 1822, 1906
PleI GAGTC 5 cut(s) 20, 498, 844, 985, 1730
PluTI GGCGCC 1 cut(s) 1826
PpsI GAGTC 5 cut(s) 20, 498, 844, 985, 1730
PscI ACATGT 1 cut(s) 439
Psp6I CCWGG 1 cut(s) 359
PspFI CCCAGC 1 cut(s) 16
PspGI CCWGG 1 cut(s) 359
PspN4I GGNNCC 6 cut(s) 419, 828, 1257, 1588, 1599, 1824
PspPI GGNCC 1 cut(s) 1255
PspXI VCTCGAGB 1 cut(s) 1738
PstI CTGCAG 1 cut(s) 566
PstNI CAGNNNCTG 1 cut(s) 217
PsuI RGATCY 2 cut(s) 398, 826
PsyI GACNNNGTC 1 cut(s) 1511
PvuII CAGCTG 1 cut(s) 20
RsaI GTAC 9 cut(s) 234, 638, 1183, 1195, 1694, 1778, 1797, 1887, 1899
RsaNI GTAC 9 cut(s) 233, 637, 1182, 1194, 1693, 1777, 1796, 1886, 1898
SaqAI TTAA 2 cut(s) 486, 588
SatI GCNGC 9 cut(s) 45, 188, 244, 377, 562, 692, 1818, 1821, 1905
Sau96I GGNCC 1 cut(s) 1255
ScaI AGTACT 4 cut(s) 234, 1183, 1195, 1694
SchI GAGTC 5 cut(s) 21, 499, 845, 985, 1730
ScrFI CCNGG 1 cut(s) 361
SfaNI GCATC 3 cut(s) 324, 338, 1395
SfcI CTRYAG 1 cut(s) 562
SfoI GGCGCC 1 cut(s) 1824
Sfr274I CTCGAG 1 cut(s) 1738
SinI GGWCC 1 cut(s) 1255
SlaI CTCGAG 1 cut(s) 1738
SmlI CTYRAG 7 cut(s) 49, 174, 445, 485, 686, 831, 1738
SmoI CTYRAG 7 cut(s) 49, 174, 445, 485, 686, 831, 1738
SpeI ACTAGT 1 cut(s) 1184
Sse9I AATT 9 cut(s) 26, 35, 301, 344, 412, 1143, 1163, 1236, 1919
SsiI CCGC 8 cut(s) 241, 244, 327, 1415, 1799, 1817, 1820, 1834
SspDI GGCGCC 1 cut(s) 1822
SspI AATATT 2 cut(s) 82, 520
SspMI CTAG 9 cut(s) 351, 794, 1179, 1185, 1203, 1368, 1431, 1461, 1859
StyD4I CCNGG 1 cut(s) 359
StyI CCWWGG 5 cut(s) 282, 405, 1101, 1486, 1783
TaaI ACNGT 3 cut(s) 859, 998, 1605
TaiI ACGT 1 cut(s) 729
TaqI TCGA 9 cut(s) 6, 117, 299, 312, 332, 472, 478, 1466, 1739
TaqII GACCGA 1 cut(s) 1358
TasI AATT 9 cut(s) 26, 35, 301, 344, 412, 1143, 1163, 1236, 1919
TatI WGTACW 5 cut(s) 232, 1181, 1193, 1692, 1776
TauI GCSGC 3 cut(s) 246, 1820, 1823
TfiI GAWTC 1 cut(s) 1614
Tru1I TTAA 2 cut(s) 486, 588
Tru9I TTAA 2 cut(s) 486, 588
TscAI CASTG 3 cut(s) 390, 1344, 1608
TseFI GTSAC 1 cut(s) 837
TseI GCWGC 6 cut(s) 44, 187, 376, 561, 691, 1904
Tsp45I GTSAC 1 cut(s) 837
TspDTI ATGAA 6 cut(s) 28, 1044, 1097, 1125, 1398, 1748
TspGWI ACGGA 2 cut(s) 213, 217
TspRI CASTG 3 cut(s) 390, 1344, 1608
Tth111I GACNNNGTC 1 cut(s) 1511
Vha464I CTTAAG 1 cut(s) 485
VpaK11BI GGWCC 1 cut(s) 1255
XapI RAATTY 3 cut(s) 301, 1163, 1919
XceI RCATGY 1 cut(s) 443
XhoI CTCGAG 1 cut(s) 1738
XmiI GTMKAC 1 cut(s) 1283
XmnI GAANNNNTTC 3 cut(s) 416, 944, 1163
XspI CTAG 9 cut(s) 351, 794, 1179, 1185, 1203, 1368, 1431, 1461, 1859
ZrmI AGTACT 4 cut(s) 234, 1183, 1195, 1694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.