RchiOBHm_Chr7g0178061

Chaperone protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
871277 .. 875109
3833 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ15867

Sequence Viewer

Length: 1614 bp
ATGCCCATAATTCAAACCCACTCACCTTACTCTTTCAGCTCCTCCACTCTCAGGCCCTCTTCCACATTCTTCACCGGAAAAGACCCAACTTTGAAACCCAATTTCGCTCCTTTCATCCGTACAAAACCTCCACGTTTGGTCCTCAGGGCCGCCGGAACCGATTACTATAAGACCCTCAACCTCGACAGAAATGCAACCCTGAAGGAGATAAAGACATCTTATCGAAAGCTCGCTCGACAGTACCATCCTGATTTGAACAAGGGCTCTGGAGCTGAAGACAAGTTCAAAGAGATTAGTGCTGCATATGAGGTCCTATCAGATGAGGAGAAAAGAGCTTCGTATGACCGCTTTGGCGAGGCAGGCTTACAGGGAGAATATGGTTCTTCAAACATGGGTTCAGCCGGGGTGGATCCTTTTGACGTTTTTGATGCGTACTTTGGGGGAAGGGGTGAATCAGGAGGCATGAACTTCAATTTTAACTTCAATACGCCAAACTCAGGAAATCAGGGCCTTGACATTCGGTATGAAATGCAACTGAGCTTTGAAGAATCCATTTTCGGAGGACAGAAGGAATTTGAAGTTTCTTGTGTTGAGACTTGTGATACGTGTGGTGGAAGTGGTGCTAAATCTGATAACTGCATCAAATCATGTACTGGTTGTGGAGGAAGAGGAGGGGTGACAAAAACTCAGAGAACACCATTTGGCATGATATCCATGGTATCTACCTGCTCAAAGTGTGACGGTCAAGGTACAATAATAACTGATCCCTGCAAAAAATGCAATGGCAAGGGACAAGTGCAGTCAAAAAGAGCAATGGTTGTAACCATTCCAGCTGGTGTTAGTGATGGAGACACAATGAAAGTTCAAGGGGAGGGGAATATTGATAAGAGAAGGGGTGTAGTTGGTGATGTCTACATAATGCTTCGTATAAATGAAAGGACTGGAATTCGGAGGGAGGGTGTCAATCTATTTTCAACTATAAATATTGATTATACTGAGGCTATTTTAGGAACTGTGATAAAGGTAGAAACTGTTGAAGGCATGAAAGAGCTTGAAATTCCTTCTGGAATTCAGCCTGGAGAAACAGTAAAGTTGTCCCGTATGGGGGTTCCAAACATGCGTAAACCTTCTGTTAGAGGAGATCATCACTTTGTTGTGAATGTACTTATTCCAAAGAGAATCAGTGGCGCAGAACGCACACTTGTTGAAGAACTCGCTTCACTTAGGACCTCTAAAAAGGGCCACTCAGGTGCTTCAAAAGGCACTGGGACACAAGATGCGCATAAAAGCAGAAACCACGCAACTAGTACTTCAAGGCAGGGGAAAAAATGTGTTTCGTCCTTGTGGAACTCTATAAAAGGCGTATTGGGGGGGAGGCAGTCGCAGGAGAGATTTGCATCAGTTACCATGGACAGACCGGCACTTTTGTGGGGTTCAAGCAAGCCTGATTCCTTTTATATGGCATCAATTTTTGGAGTTTTAGTTGTAACTTGTATTTGTACCGCGATAGGAAAGACTCGAAACCTCACTTTATCACAACACAAGGATAGTTCTCGTACTCATAGAACAAACAACAATGCTGACGGAAATACTCGATCTGACATAGATGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

537

Amino Acids

58.42

Weight (kDa)

9.16

Isoelectric Point (pI)

33.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 54 - 115 4.8e-25 DnaJ domain
DnaJ_C PF01556 173 - 391 2.4e-36 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 200 - 264 1.4e-14 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1281
Acc36I ACCTGC 1 cut(s) 734
AccI GTMKAC 1 cut(s) 912
AccII CGCG 1 cut(s) 1505
AciI CCGC 3 cut(s) 150, 346, 1503
AclWI GGATC 3 cut(s) 404, 417, 758
AcsI RAATTY 4 cut(s) 572, 945, 1056, 1068
AcuI CTGAAG 2 cut(s) 221, 294
AfaI GTAC 9 cut(s) 121, 242, 434, 652, 751, 1164, 1309, 1501, 1558
AfiI CCNNNNNNNGG 4 cut(s) 51, 497, 1104, 1105
AflIII ACRYGT 1 cut(s) 605
AhlI ACTAGT 1 cut(s) 1304
AjnI CCWGG 1 cut(s) 1075
AleI CACNNNNGTG 2 cut(s) 1248, 1426
AluBI AGCT 7 cut(s) 39, 229, 272, 335, 540, 833, 1051
AluI AGCT 7 cut(s) 39, 229, 272, 335, 540, 833, 1051
Alw26I GTCTC 2 cut(s) 587, 843
AlwI GGATC 3 cut(s) 404, 417, 758
AoxI GGCC 4 cut(s) 53, 147, 508, 1240
ApeKI GCWGC 1 cut(s) 299
ApoI RAATTY 4 cut(s) 572, 945, 1056, 1068
AspLEI GCGC 2 cut(s) 1190, 1282
AspS9I GGNCC 7 cut(s) 54, 139, 147, 310, 508, 1227, 1240
AsuC2I CCSGG 1 cut(s) 403
AsuHPI GGTGA 5 cut(s) 15, 64, 461, 688, 917
AvaII GGWCC 3 cut(s) 139, 310, 1227
AxyI CCTNAGG 1 cut(s) 143
BamHI GGATCC 1 cut(s) 409
BanII GRGCYC 1 cut(s) 266
BbsI GAAGAC 1 cut(s) 282
BbvI GCAGC 1 cut(s) 286
BccI CCATC 2 cut(s) 252, 839
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciT130I CCWGG 1 cut(s) 1077
BcnI CCSGG 1 cut(s) 403
BcoDI GTCTC 2 cut(s) 587, 843
BcuI ACTAGT 1 cut(s) 1304
BfaI CTAG 1 cut(s) 1305
BfuAI ACCTGC 1 cut(s) 734
BisI GCNGC 2 cut(s) 150, 300
BlsI GCNGC 2 cut(s) 151, 301
BmcAI AGTACT 1 cut(s) 1309
Bme1390I CCNGG 2 cut(s) 403, 1077
Bme18I GGWCC 3 cut(s) 139, 310, 1227
BmgT120I GGNCC 7 cut(s) 54, 139, 147, 310, 508, 1227, 1240
BmiI GGNNCC 3 cut(s) 157, 411, 1110
BmrFI CCNGG 2 cut(s) 403, 1077
BmrI ACTGGG 1 cut(s) 1275
BmsI GCATC 5 cut(s) 418, 648, 1267, 1406, 1472
BmuI ACTGGG 1 cut(s) 1275
BpiI GAAGAC 1 cut(s) 282
BpmI CTGGAG 2 cut(s) 288, 1098
BpuMI CCSGG 1 cut(s) 403
BsaAI YACGTR 1 cut(s) 606
BsaBI GATNNNNATC 1 cut(s) 1396
BsaJI CCNNGG 3 cut(s) 402, 714, 1407
BsaWI WCCGGW 1 cut(s) 74
BsaXI ACNNNNNCTCC 8 cut(s) 112, 142, 943, 973, 1071, 1101, 1467, 1497
Bsc4I CCNNNNNNNGG 4 cut(s) 51, 497, 1104, 1105
Bse118I RCCGGY 1 cut(s) 1417
Bse1I ACTGG 3 cut(s) 658, 946, 1270
Bse21I CCTNAGG 1 cut(s) 143
Bse3DI GCAATG 2 cut(s) 787, 819
Bse8I GATNNNNATC 1 cut(s) 1396
BseBI CCWGG 1 cut(s) 1077
BseDI CCNNGG 3 cut(s) 402, 714, 1407
BseGI GGATG 2 cut(s) 114, 244
BseJI GATNNNNATC 1 cut(s) 1396
BseLI CCNNNNNNNGG 4 cut(s) 51, 497, 1104, 1105
BseMI GCAATG 2 cut(s) 787, 819
BseMII CTCAG 7 cut(s) 64, 157, 510, 527, 701, 987, 1260
BseNI ACTGG 3 cut(s) 658, 946, 1270
BseRI GAGGAG 4 cut(s) 31, 338, 684, 1152
BseXI GCAGC 1 cut(s) 286
BsgI GTGCAG 1 cut(s) 818
Bsh1236I CGCG 1 cut(s) 1505
BshFI GGCC 4 cut(s) 55, 149, 510, 1242
BsiSI CCGG 4 cut(s) 75, 153, 402, 1418
BslFI GGGAC 3 cut(s) 804, 1081, 1282
BslI CCNNNNNNNGG 4 cut(s) 51, 497, 1104, 1105
BsmAI GTCTC 2 cut(s) 587, 843
BsmFI GGGAC 3 cut(s) 804, 1081, 1282
BsnI GGCC 4 cut(s) 55, 149, 510, 1242
Bsp1286I GDGCHC 1 cut(s) 266
Bsp143I GATC 4 cut(s) 409, 763, 1141, 1595
Bsp19I CCATGG 2 cut(s) 714, 1407
BspACI CCGC 3 cut(s) 150, 346, 1503
BspANI GGCC 4 cut(s) 55, 149, 510, 1242
BspCNI CTCAG 7 cut(s) 63, 156, 509, 528, 700, 988, 1259
BspFNI CGCG 1 cut(s) 1505
BspLI GGNNCC 3 cut(s) 157, 411, 1110
BspMI ACCTGC 1 cut(s) 734
BspPI GGATC 3 cut(s) 404, 417, 758
BsrDI GCAATG 2 cut(s) 787, 819
BsrFI RCCGGY 1 cut(s) 1417
BsrI ACTGG 3 cut(s) 658, 946, 1270
BssAI RCCGGY 1 cut(s) 1417
BssECI CCNNGG 3 cut(s) 402, 714, 1407
BssMI GATC 4 cut(s) 409, 763, 1141, 1595
BssT1I CCWWGG 2 cut(s) 714, 1407
Bst2UI CCWGG 1 cut(s) 1077
Bst4CI ACNGT 5 cut(s) 240, 743, 1015, 1033, 1087
Bst6I CTCTTC 2 cut(s) 64, 661
BstAPI GCANNNNNTGC 1 cut(s) 777
BstBAI YACGTR 1 cut(s) 606
BstC8I GCNNGC 3 cut(s) 231, 361, 1442
BstDEI CTNAG 8 cut(s) 50, 143, 496, 536, 687, 996, 1223, 1246
BstDSI CCRYGG 2 cut(s) 714, 1407
BstF5I GGATG 2 cut(s) 114, 244
BstFNI CGCG 1 cut(s) 1505
BstHHI GCGC 2 cut(s) 1190, 1282
BstKTI GATC 4 cut(s) 412, 766, 1144, 1598
BstMAI GTCTC 2 cut(s) 587, 843
BstMBI GATC 4 cut(s) 409, 763, 1141, 1595
BstMWI GCNNNNNNNGC 3 cut(s) 360, 777, 1194
BstNI CCWGG 1 cut(s) 1077
BstNSI RCATGY 1 cut(s) 1120
BstSCI CCNGG 2 cut(s) 401, 1075
BstUI CGCG 1 cut(s) 1505
BstV1I GCAGC 1 cut(s) 286
BstV2I GAAGAC 1 cut(s) 282
BstX2I RGATCY 1 cut(s) 409
BstYI RGATCY 1 cut(s) 409
Bsu36I CCTNAGG 1 cut(s) 143
BsuRI GGCC 4 cut(s) 55, 149, 510, 1242
BtgI CCRYGG 2 cut(s) 714, 1407
BtsCI GGATG 2 cut(s) 114, 244
BtsIMutI CAGTG 2 cut(s) 1189, 1263
BveI ACCTGC 1 cut(s) 734
Cac8I GCNNGC 3 cut(s) 231, 361, 1442
CfoI GCGC 2 cut(s) 1190, 1282
Cfr10I RCCGGY 1 cut(s) 1417
Cfr13I GGNCC 7 cut(s) 54, 139, 147, 310, 508, 1227, 1240
Csp6I GTAC 9 cut(s) 120, 241, 433, 651, 750, 1163, 1308, 1500, 1557
CviAII CATG 8 cut(s) 391, 463, 648, 706, 715, 1042, 1117, 1408
CviQI GTAC 9 cut(s) 120, 241, 433, 651, 750, 1163, 1308, 1500, 1557
DdeI CTNAG 8 cut(s) 50, 143, 496, 536, 687, 996, 1223, 1246
DpnI GATC 4 cut(s) 411, 765, 1143, 1597
DpnII GATC 4 cut(s) 409, 763, 1141, 1595
Eam1104I CTCTTC 2 cut(s) 64, 661
EarI CTCTTC 2 cut(s) 64, 661
Eco130I CCWWGG 2 cut(s) 714, 1407
Eco24I GRGCYC 1 cut(s) 266
Eco32I GATATC 1 cut(s) 711
Eco47I GGWCC 3 cut(s) 139, 310, 1227
Eco57I CTGAAG 2 cut(s) 221, 294
Eco81I CCTNAGG 1 cut(s) 143
EcoO109I RGGNCCY 4 cut(s) 54, 310, 508, 1227
EcoRI GAATTC 2 cut(s) 945, 1068
EcoRII CCWGG 1 cut(s) 1075
EcoRV GATATC 1 cut(s) 711
EcoT14I CCWWGG 2 cut(s) 714, 1407
EcoT38I GRGCYC 1 cut(s) 266
ErhI CCWWGG 2 cut(s) 714, 1407
FaeI CATG 8 cut(s) 394, 466, 651, 709, 718, 1045, 1120, 1411
FaqI GGGAC 3 cut(s) 804, 1081, 1282
FatI CATG 8 cut(s) 390, 462, 647, 705, 714, 1041, 1116, 1407
FauNDI CATATG 1 cut(s) 304
FblI GTMKAC 1 cut(s) 912
Fnu4HI GCNGC 2 cut(s) 150, 300
FokI GGATG 2 cut(s) 101, 231
FriOI GRGCYC 1 cut(s) 266
Fsp4HI GCNGC 2 cut(s) 150, 300
FspAI RTGCGCAY 1 cut(s) 1281
FspBI CTAG 1 cut(s) 1305
FspI TGCGCA 1 cut(s) 1281
GlaI GCGC 2 cut(s) 1189, 1281
GluI GCNGC 2 cut(s) 150, 300
GsuI CTGGAG 2 cut(s) 288, 1098
HaeIII GGCC 4 cut(s) 55, 149, 510, 1242
HapII CCGG 4 cut(s) 75, 153, 402, 1418
HhaI GCGC 2 cut(s) 1190, 1282
Hin1II CATG 8 cut(s) 394, 466, 651, 709, 718, 1045, 1120, 1411
Hin6I GCGC 2 cut(s) 1188, 1280
HinP1I GCGC 2 cut(s) 1188, 1280
HinfI GANTC 5 cut(s) 452, 548, 1179, 1448, 1516
HpaII CCGG 4 cut(s) 75, 153, 402, 1418
HphI GGTGA 5 cut(s) 15, 64, 461, 688, 917
Hpy166II GTNNAC 2 cut(s) 913, 1124
Hpy188I TCNGA 6 cut(s) 319, 560, 631, 690, 951, 1600
Hpy188III TCNNGA 5 cut(s) 248, 267, 456, 498, 1065
Hpy8I GTNNAC 2 cut(s) 913, 1124
HpyAV CCTTC 7 cut(s) 196, 438, 562, 885, 1031, 1071, 1137
HpyCH4III ACNGT 5 cut(s) 240, 743, 1015, 1033, 1087
HpyCH4IV ACGT 3 cut(s) 133, 420, 605
HpyCH4V TGCA 8 cut(s) 194, 302, 532, 639, 771, 780, 799, 1397
HpyF10VI GCNNNNNNNGC 3 cut(s) 360, 777, 1194
HpyF3I CTNAG 8 cut(s) 50, 143, 496, 536, 687, 996, 1223, 1246
HpySE526I ACGT 3 cut(s) 133, 420, 605
Hsp92II CATG 8 cut(s) 394, 466, 651, 709, 718, 1045, 1120, 1411
HspAI GCGC 2 cut(s) 1188, 1280
Kzo9I GATC 4 cut(s) 409, 763, 1141, 1595
LmnI GCTCC 3 cut(s) 44, 112, 269
Lsp1109I GCAGC 1 cut(s) 286
LweI GCATC 5 cut(s) 418, 648, 1267, 1406, 1472
MaeI CTAG 1 cut(s) 1305
MaeII ACGT 3 cut(s) 133, 420, 605
MaeIII GTNAC 5 cut(s) 676, 737, 820, 1402, 1486
MalI GATC 4 cut(s) 411, 765, 1143, 1597
MboI GATC 4 cut(s) 409, 763, 1141, 1595
MboII GAAGA 7 cut(s) 51, 61, 287, 375, 557, 678, 1220
MflI RGATCY 1 cut(s) 409
MhlI GDGCHC 1 cut(s) 266
MluCI AATT 8 cut(s) 9, 100, 472, 572, 945, 1056, 1068, 1467
MlyI GAGTC 1 cut(s) 1510
MseI TTAA 2 cut(s) 477, 1612
MslI CAYNNNNRTG 2 cut(s) 1248, 1426
MspA1I CMGCKG 1 cut(s) 833
MspI CCGG 4 cut(s) 75, 153, 402, 1418
MspR9I CCNGG 2 cut(s) 403, 1077
MvaI CCWGG 1 cut(s) 1077
MvnI CGCG 1 cut(s) 1505
MwoI GCNNNNNNNGC 3 cut(s) 360, 777, 1194
NciI CCSGG 1 cut(s) 403
NcoI CCATGG 2 cut(s) 714, 1407
NdeI CATATG 1 cut(s) 304
NdeII GATC 4 cut(s) 409, 763, 1141, 1595
NlaIII CATG 8 cut(s) 394, 466, 651, 709, 718, 1045, 1120, 1411
NlaIV GGNNCC 3 cut(s) 157, 411, 1110
NmuCI GTSAC 2 cut(s) 676, 737
NsbI TGCGCA 1 cut(s) 1281
NspI RCATGY 1 cut(s) 1120
OliI CACNNNNGTG 2 cut(s) 1248, 1426
PfeI GAWTC 4 cut(s) 452, 548, 1179, 1448
PkrI GCNGC 2 cut(s) 151, 301
PleI GAGTC 1 cut(s) 1510
PpsI GAGTC 1 cut(s) 1510
Ppu21I YACGTR 1 cut(s) 606
PpuMI RGGWCCY 2 cut(s) 310, 1227
Psp5II RGGWCCY 2 cut(s) 310, 1227
Psp6I CCWGG 1 cut(s) 1075
PspGI CCWGG 1 cut(s) 1075
PspN4I GGNNCC 3 cut(s) 157, 411, 1110
PspPI GGNCC 7 cut(s) 54, 139, 147, 310, 508, 1227, 1240
PspPPI RGGWCCY 2 cut(s) 310, 1227
PsuI RGATCY 1 cut(s) 409
PvuII CAGCTG 1 cut(s) 833
RsaI GTAC 9 cut(s) 121, 242, 434, 652, 751, 1164, 1309, 1501, 1558
RsaNI GTAC 9 cut(s) 120, 241, 433, 651, 750, 1163, 1308, 1500, 1557
RseI CAYNNNNRTG 2 cut(s) 1248, 1426
SaqAI TTAA 2 cut(s) 477, 1612
SatI GCNGC 2 cut(s) 150, 300
Sau3AI GATC 4 cut(s) 409, 763, 1141, 1595
Sau96I GGNCC 7 cut(s) 54, 139, 147, 310, 508, 1227, 1240
ScaI AGTACT 1 cut(s) 1309
SchI GAGTC 1 cut(s) 1510
ScrFI CCNGG 2 cut(s) 403, 1077
SduI GDGCHC 1 cut(s) 266
SfaNI GCATC 5 cut(s) 418, 648, 1267, 1406, 1472
SinI GGWCC 3 cut(s) 139, 310, 1227
SmiMI CAYNNNNRTG 2 cut(s) 1248, 1426
SpeI ACTAGT 1 cut(s) 1304
Sse9I AATT 8 cut(s) 9, 100, 472, 572, 945, 1056, 1068, 1467
SsiI CCGC 3 cut(s) 150, 346, 1503
SspI AATATT 2 cut(s) 880, 985
SspMI CTAG 1 cut(s) 1305
StyD4I CCNGG 2 cut(s) 401, 1075
StyI CCWWGG 2 cut(s) 714, 1407
TaaI ACNGT 5 cut(s) 240, 743, 1015, 1033, 1087
TaiI ACGT 3 cut(s) 136, 423, 608
TaqI TCGA 5 cut(s) 183, 223, 235, 1519, 1594
TasI AATT 8 cut(s) 9, 100, 472, 572, 945, 1056, 1068, 1467
TatI WGTACW 3 cut(s) 650, 1162, 1307
TauI GCSGC 1 cut(s) 152
TfiI GAWTC 4 cut(s) 452, 548, 1179, 1448
Tru1I TTAA 2 cut(s) 477, 1612
Tru9I TTAA 2 cut(s) 477, 1612
TscAI CASTG 2 cut(s) 1189, 1270
TseFI GTSAC 2 cut(s) 676, 737
TseI GCWGC 1 cut(s) 299
Tsp45I GTSAC 2 cut(s) 676, 737
TspDTI ATGAA 6 cut(s) 103, 479, 540, 872, 948, 1058
TspGWI ACGGA 2 cut(s) 107, 1599
TspRI CASTG 2 cut(s) 1189, 1270
VpaK11BI GGWCC 3 cut(s) 139, 310, 1227
XapI RAATTY 4 cut(s) 572, 945, 1056, 1068
XceI RCATGY 1 cut(s) 1120
XmiI GTMKAC 1 cut(s) 912
XspI CTAG 1 cut(s) 1305
ZrmI AGTACT 1 cut(s) 1309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.