Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0001723

Physical Location & Seq

Genomic Coordinates Reverse (-)

31765261 .. 31769268

Gene Structure 4008 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1238500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGCCCGTACTCCAAACCACCTGCATCTCCAATTTCCCGCCAAATCCCAACTCCGCGGTTCCACTTCCGCCCTATTCTTTGAGCTGCTCCGCCCTCAGCTCCGCCGCTTCTACATTCTTCGCCAGAAGTAAAAACCCAATCTTCCAACCCAATTCCGCTTCTTTCCTCCGCGCCAATCCCCCGCGCGGGGCTCGTTTGGCCATCAGAGCCGCCGGAACCGATTACTATAAGACTCTCAACGTCCCCAGAACCGCCACGCTGCAGGAGATCAAGTCCGCTTATCGAAATCTCGCCCGAAAGTATCATCCGGACAAGGGCGGTGGAGCTGAGGACAAGTTCAAAGAGATTAGTGCTGCATATGAGGTCCTATCAGATGATGGGAAAAGGTCTTTATATGATCGCTTTGGTGAAGCAGGTTTACAGGGAGACTATGGTTCCTCAACCATGGGTCCATCAGGGGTGGATCCTTTTGACATTTTTGATACATTCTTTGGAGGTTCGGATGGGATGTTTGGAGGAAGGGGTGAATCAGGAGGCATGAACTTCAATTTCAGCAACAGGGGAAACCAGGGTCTTGACATTCGGTACGATCTGTATTTGAGCTTTGAAGAATCCATTTTTGGGGTACAGAGAGAAATCCAAGTTTCTTGTGTTGAGACATGTGATGACTGCGGTGGAACAGGTGCTAAATCTGATAAAGGCATAAAATCATGTACTGGTTGTGGAGGAAGAGGAGGGGTGATGAAAACTCAGAAAACACCATTTGGAATGATTTCGCAGGTATCAACCTGCTCAAAGTGTGGTGGTGATGGTAGAATAATCACTGATCCTTGCCAAAGATGCAGTGGCAAAGGACAAGTGCAGTCAAAAAGAGCTATGAGCATAAGCATTCCAGCCGGTGTTAATGATGGAGCCACAATGCAAATTCAAGGGGAGGGGAATTTGGATAAGAAAAGGGGTAAAGTTGGAGATGTCTACATAGTACTCCATGTAGATGAAAAGGCTGGAATTCGAAGAGATGGTCTCAATCTGTACTCAAAAATCAATATTGATTATACCGAAGCCATTTTAGGGACCGTTATAAAGGTTGAAACTGTTGAAGGCTTGAAAGAGCTTCAGATTCCTTCTGGAATTCAGCCTGGAGAGACGGTAAAGTTGCGACGCATGGGGGTTCCAGACATCAACAGACCTTCTTCTCGAGGAGATCATCATTTTACTGTCAATGTTCTGATCCCAAAGATAATCAGTGATAAGGAACGTGCACTTGTCGAAGAACTGGCTTCGCTTAAAGCATCTAGAGAAGGTCATTCAGCTGCTTCTAAAGGCACCGGGATACGAGATAGGAACTTTGGCAAGCATAGAACCAATGCGTCAAGCCAGGCAACTAAACGTTCTGCATCCCTGTGGGACTCGATAAAGGGCGTGTTGGGGAAGAGGCAGTCGGGAGAGGGATTTGCATCAGTCAGCGTGGACAGGCCACCGTTATTATGGGGCTCATTCCAGCCGGATCCGTTGCATATGGCATCAATTTTTACAGTTTTAGTCGTAACTTGTATTTGTACCGTCATGGGAAAGACCGGTAACCTCACTTTATTACAGCAAAAAGATGGTTCTCCTCGCACTCGTAGAACAAAAAAAGAACAACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

550

Amino Acids

59.16

Weight (kDa)

9.31

Isoelectric Point (pI)

35.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	74 - 133	6.3e-24	DnaJ domain
DnaJ_C	PF01556	194 - 412	2.9e-38	DnaJ C terminal domain
DnaJ_CXXCXGXG	PF00684	221 - 285	1e-13	DnaJ central domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001723)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17830
fragaria_vesca	FvH4_5g17580 FvH4_5g17580 FvH4_5g17580 FvH4_5g17580 FvH4_5g17580 FvH4_5g17580 FvH4_5g17580 FvH4_5g17580 FvH4_5g17580 FvH4_5g17580 FvH4_6g08920 FvH4_6g08920 FvH4_6g08920 FvH4_6g08920 FvH4_6g08920
malus_domestica	MD14G1238500.v1.1
prunus_persica	Prupe.5G235700_v2.0.a1 Prupe.5G235700_v2.0.a1 Prupe.5G235700_v2.0.a1 Prupe.5G235700_v2.0.a1 Prupe.5G235700_v2.0.a1 Prupe.5G235700_v2.0.a1
pyrus_communis	pycom06g20580 pycom14g19960
rosa_chinensis	RchiOBHm_Chr3g0459211 RchiOBHm_Chr7g0178061
rosa_laevigata	RLG00000005475 RLG00000025103
rosa_multiflora	Rmu_co8457643.1_g000001 Rmu_sc0002435.1_g000013 Rmu_sc0014208.1_g000009 Rmu_sc0025216.1_g000001 Rmu_sc0025217.1_g000001
rosa_roxburghii	Rroxscaffold_3G00275210 Rroxscaffold_6G00420410
rosa_rugosa	Rorug03G0034200 Rorug06G0413200
rosa_samantha	Rh3AG092300 Rh3BG095100 Rh3CG096200 Rh3DG096000 Rh7AG012400 Rh7BG012300 Rh7CG012300 Rh7DG012600
rosa_wichuraiana	Rw3G007920 Rw7G000980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1082
AarI	CACCTGC	1 cut(s)	29
Acc36I	ACCTGC	4 cut(s)	29, 404, 769, 797
AccB1I	GGYRCC	1 cut(s)	1325
AccI	GTMKAC	1 cut(s)	975
AccII	CGCG	4 cut(s)	56, 171, 184, 186
AccIII	TCCGGA	1 cut(s)	307
AclI	AACGTT	2 cut(s)	1390, 1645
AclWI	GGATC	6 cut(s)	458, 471, 821, 1225, 1502, 1515
AcoI	YGGCCR	1 cut(s)	198
AcsI	RAATTY	4 cut(s)	924, 940, 1008, 1131
AcuI	CTGAAG	1 cut(s)	1100
AfaI	GTAC	7 cut(s)	9, 587, 627, 715, 984, 1034, 1561
AfiI	CCNNNNNNNGG	6 cut(s)	185, 186, 187, 314, 621, 1071
AflIII	ACRYGT	1 cut(s)	659
AgeI	ACCGGT	1 cut(s)	1577
AgsI	TTSAA	7 cut(s)	340, 547, 608, 929, 1091, 1100, 1108
AjnI	CCWGG	3 cut(s)	567, 1138, 1377
AjuI	GAANNNNNNNTTGG	2 cut(s)	603, 635
AluBI	AGCT	7 cut(s)	84, 99, 326, 603, 875, 1114, 1313
AluI	AGCT	7 cut(s)	84, 99, 326, 603, 875, 1114, 1313
Alw21I	GWGCWC	1 cut(s)	1264
Alw26I	GTCTC	4 cut(s)	420, 650, 1028, 1139
Alw44I	GTGCAC	1 cut(s)	1260
AlwI	GGATC	6 cut(s)	458, 471, 821, 1225, 1502, 1515
Ama87I	CYCGRG	1 cut(s)	1197
Aor13HI	TCCGGA	1 cut(s)	307
AoxI	GGCC	2 cut(s)	198, 1475
ApaLI	GTGCAC	1 cut(s)	1260
ApeKI	GCWGC	4 cut(s)	84, 259, 353, 1313
ApoI	RAATTY	4 cut(s)	924, 940, 1008, 1131
ArsI	GACNNNNNNTTYG	2 cut(s)	1006, 1038
AsiGI	ACCGGT	1 cut(s)	1577
Asp700I	GAANNNNTTC	1 cut(s)	772
AspLEI	GCGC	2 cut(s)	173, 186
AspS9I	GGNCC	3 cut(s)	364, 449, 1074
AsuC2I	CCSGG	1 cut(s)	1330
AsuHPI	GGTGA	4 cut(s)	419, 536, 751, 818
AsuII	TTCGAA	1 cut(s)	1012
AvaI	CYCGRG	1 cut(s)	1197
AvaII	GGWCC	3 cut(s)	364, 449, 1074
BaeGI	GKGCMC	1 cut(s)	1264
BalI	TGGCCA	1 cut(s)	200
BamHI	GGATCC	2 cut(s)	463, 1507
BanI	GGYRCC	1 cut(s)	1325
BanII	GRGCYC	2 cut(s)	193, 1496
BarI	GAAGNNNNNNTAC	2 cut(s)	402, 434
Bbv12I	GWGCWC	1 cut(s)	1264
BbvCI	CCTCAGC	2 cut(s)	95, 327
BbvI	GCAGC	4 cut(s)	71, 246, 340, 1300
BccI	CCATC	8 cut(s)	209, 371, 460, 497, 803, 902, 1013, 1601
BciT130I	CCWGG	3 cut(s)	569, 1140, 1379
BciVI	GTATCC	1 cut(s)	1326
BcnI	CCSGG	1 cut(s)	1330
BcoDI	GTCTC	4 cut(s)	420, 650, 1028, 1139
BfaI	CTAG	1 cut(s)	1296
BfmI	CTRYAG	1 cut(s)	260
BfuAI	ACCTGC	4 cut(s)	29, 404, 769, 797
BfuI	GTATCC	1 cut(s)	1326
BisI	GCNGC	6 cut(s)	85, 105, 210, 260, 354, 1314
BlsI	GCNGC	6 cut(s)	86, 106, 211, 261, 355, 1315
BmcAI	AGTACT	1 cut(s)	984
Bme1390I	CCNGG	4 cut(s)	569, 1140, 1330, 1379
Bme18I	GGWCC	3 cut(s)	364, 449, 1074
BmeT110I	CYCGRG	1 cut(s)	1197
BmgT120I	GGNCC	3 cut(s)	364, 449, 1074
BmrFI	CCNGG	4 cut(s)	569, 1140, 1330, 1379
BmsI	GCATC	6 cut(s)	33, 830, 1301, 1406, 1466, 1532
BplI	GAGNNNNNCTC	2 cut(s)	1008, 1040
BpmI	CTGGAG	1 cut(s)	1161
Bpu10I	CCTNAGC	2 cut(s)	95, 327
Bpu14I	TTCGAA	1 cut(s)	1012
BpuMI	CCSGG	1 cut(s)	1330
BsaBI	GATNNNNATC	1 cut(s)	1456
BsaI	GGTCTC	1 cut(s)	1028
BsaJI	CCNNGG	3 cut(s)	54, 444, 568
BsaWI	WCCGGW	2 cut(s)	307, 1577
BsaXI	ACNNNNNCTCC	4 cut(s)	257, 287, 1134, 1164
Bsc4I	CCNNNNNNNGG	6 cut(s)	185, 186, 187, 314, 621, 1071
Bse118I	RCCGGY	2 cut(s)	896, 1577
Bse1I	ACTGG	2 cut(s)	721, 1281
Bse8I	GATNNNNATC	1 cut(s)	1456
BseAI	TCCGGA	1 cut(s)	307
BseBI	CCWGG	3 cut(s)	569, 1140, 1379
BseDI	CCNNGG	3 cut(s)	54, 444, 568
BseGI	GGATG	4 cut(s)	304, 508, 513, 1397
BseJI	GATNNNNATC	1 cut(s)	1456
BseLI	CCNNNNNNNGG	6 cut(s)	185, 186, 187, 314, 621, 1071
BseMII	CTCAG	3 cut(s)	109, 318, 764
BseNI	ACTGG	2 cut(s)	721, 1281
BseRI	GAGGAG	3 cut(s)	747, 1215, 1605
BseSI	GKGCMC	1 cut(s)	1264
BseXI	GCAGC	4 cut(s)	71, 246, 340, 1300
BsgI	GTGCAG	1 cut(s)	881
Bsh1236I	CGCG	4 cut(s)	56, 171, 184, 186
BshFI	GGCC	2 cut(s)	200, 1477
BshNI	GGYRCC	1 cut(s)	1325
BshTI	ACCGGT	1 cut(s)	1577
BsiHKAI	GWGCWC	1 cut(s)	1264
BsiHKCI	CYCGRG	1 cut(s)	1197
BsiSI	CCGG	6 cut(s)	213, 308, 897, 1329, 1505, 1578
BslFI	GGGAC	3 cut(s)	227, 1087, 1421
BslI	CCNNNNNNNGG	6 cut(s)	185, 186, 187, 314, 621, 1071
BsmAI	GTCTC	4 cut(s)	420, 650, 1028, 1139
BsmBI	CGTCTC	1 cut(s)	1139
BsmFI	GGGAC	3 cut(s)	227, 1087, 1421
BsmI	GAATGC	1 cut(s)	888
BsnI	GGCC	2 cut(s)	200, 1477
Bso31I	GGTCTC	1 cut(s)	1028
BsoBI	CYCGRG	1 cut(s)	1197
Bsp119I	TTCGAA	1 cut(s)	1012
Bsp1286I	GDGCHC	3 cut(s)	193, 1264, 1496
Bsp13I	TCCGGA	1 cut(s)	307
Bsp143I	GATC	8 cut(s)	267, 397, 463, 589, 826, 1204, 1230, 1507
Bsp19I	CCATGG	1 cut(s)	444
BspANI	GGCC	2 cut(s)	200, 1477
BspCNI	CTCAG	3 cut(s)	108, 319, 763
BspEI	TCCGGA	1 cut(s)	307
BspFNI	CGCG	4 cut(s)	56, 171, 184, 186
BspMAI	CTGCAG	1 cut(s)	264
BspMI	ACCTGC	4 cut(s)	29, 404, 769, 797
BspPI	GGATC	6 cut(s)	458, 471, 821, 1225, 1502, 1515
BspT104I	TTCGAA	1 cut(s)	1012
BspT107I	GGYRCC	1 cut(s)	1325
BspTNI	GGTCTC	1 cut(s)	1028
BsrFI	RCCGGY	2 cut(s)	896, 1577
BsrI	ACTGG	2 cut(s)	721, 1281
BssAI	RCCGGY	2 cut(s)	896, 1577
BssECI	CCNNGG	3 cut(s)	54, 444, 568
BssMI	GATC	8 cut(s)	267, 397, 463, 589, 826, 1204, 1230, 1507
BssT1I	CCWWGG	1 cut(s)	444
Bst2UI	CCWGG	3 cut(s)	569, 1140, 1379
Bst4CI	ACNGT	7 cut(s)	1078, 1096, 1150, 1219, 1482, 1537, 1564
Bst6I	CTCTTC	3 cut(s)	724, 1009, 1427
BstBI	TTCGAA	1 cut(s)	1012
BstC8I	GCNNGC	1 cut(s)	1355
BstDEI	CTNAG	3 cut(s)	95, 327, 750
BstDSI	CCRYGG	2 cut(s)	54, 444
BstEII	GGTNACC	1 cut(s)	1580
BstF5I	GGATG	4 cut(s)	304, 508, 513, 1397
BstFNI	CGCG	4 cut(s)	56, 171, 184, 186
BstHHI	GCGC	2 cut(s)	173, 186
BstKTI	GATC	8 cut(s)	270, 400, 466, 592, 829, 1207, 1233, 1510
BstMAI	GTCTC	4 cut(s)	420, 650, 1028, 1139
BstMBI	GATC	8 cut(s)	267, 397, 463, 589, 826, 1204, 1230, 1507
BstMWI	GCNNNNNNNGC	3 cut(s)	197, 206, 840
BstNI	CCWGG	3 cut(s)	569, 1140, 1379
BstNSI	RCATGY	1 cut(s)	663
BstPI	GGTNACC	1 cut(s)	1580
BstSCI	CCNGG	4 cut(s)	567, 1138, 1328, 1377
BstSFI	CTRYAG	1 cut(s)	260
BstSLI	GKGCMC	1 cut(s)	1264
BstUI	CGCG	4 cut(s)	56, 171, 184, 186
BstV1I	GCAGC	4 cut(s)	71, 246, 340, 1300
BstX2I	RGATCY	2 cut(s)	463, 1507
BstYI	RGATCY	2 cut(s)	463, 1507
BsuI	GTATCC	1 cut(s)	1326
BsuRI	GGCC	2 cut(s)	200, 1477
BtgI	CCRYGG	2 cut(s)	54, 444
BtsCI	GGATG	4 cut(s)	304, 508, 513, 1397
BtsI	GCAGTG	1 cut(s)	850
BtsIMutI	CAGTG	3 cut(s)	822, 850, 1252
BveI	ACCTGC	4 cut(s)	29, 404, 769, 797
Cac8I	GCNNGC	1 cut(s)	1355
CfoI	GCGC	2 cut(s)	173, 186
Cfr10I	RCCGGY	2 cut(s)	896, 1577
Cfr13I	GGNCC	3 cut(s)	364, 449, 1074
Cfr42I	CCGCGG	1 cut(s)	57
CseI	GACGC	2 cut(s)	1170, 1359
Csp6I	GTAC	7 cut(s)	8, 586, 626, 714, 983, 1033, 1560
CspAI	ACCGGT	1 cut(s)	1577
CspCI	CAANNNNNGTGG	2 cut(s)	301, 336
CviAII	CATG	7 cut(s)	445, 538, 660, 711, 989, 1165, 1567
CviQI	GTAC	7 cut(s)	8, 586, 626, 714, 983, 1033, 1560
DdeI	CTNAG	3 cut(s)	95, 327, 750
DpnI	GATC	8 cut(s)	269, 399, 465, 591, 828, 1206, 1232, 1509
DpnII	GATC	8 cut(s)	267, 397, 463, 589, 826, 1204, 1230, 1507
EaeI	YGGCCR	1 cut(s)	198
Eam1104I	CTCTTC	3 cut(s)	724, 1009, 1427
EarI	CTCTTC	3 cut(s)	724, 1009, 1427
EciI	GGCGGA	3 cut(s)	57, 79, 91
Eco130I	CCWWGG	1 cut(s)	444
Eco24I	GRGCYC	2 cut(s)	193, 1496
Eco31I	GGTCTC	1 cut(s)	1028
Eco47I	GGWCC	3 cut(s)	364, 449, 1074
Eco57I	CTGAAG	1 cut(s)	1100
Eco88I	CYCGRG	1 cut(s)	1197
Eco91I	GGTNACC	1 cut(s)	1580
EcoO109I	RGGNCCY	1 cut(s)	364
EcoO65I	GGTNACC	1 cut(s)	1580
EcoRI	GAATTC	2 cut(s)	1008, 1131
EcoRII	CCWGG	3 cut(s)	567, 1138, 1377
EcoT14I	CCWWGG	1 cut(s)	444
EcoT38I	GRGCYC	2 cut(s)	193, 1496
ErhI	CCWWGG	1 cut(s)	444
Esp3I	CGTCTC	1 cut(s)	1139
FaeI	CATG	7 cut(s)	448, 541, 663, 714, 992, 1168, 1570
FaqI	GGGAC	3 cut(s)	227, 1087, 1421
FatI	CATG	7 cut(s)	444, 537, 659, 710, 988, 1164, 1566
FauI	CCCGC	3 cut(s)	45, 179, 189
FauNDI	CATATG	2 cut(s)	358, 1518
FblI	GTMKAC	1 cut(s)	975
Fnu4HI	GCNGC	6 cut(s)	85, 105, 210, 260, 354, 1314
FokI	GGATG	4 cut(s)	291, 515, 520, 1384
FriOI	GRGCYC	2 cut(s)	193, 1496
Fsp4HI	GCNGC	6 cut(s)	85, 105, 210, 260, 354, 1314
FspBI	CTAG	1 cut(s)	1296
GlaI	GCGC	2 cut(s)	172, 185
GluI	GCNGC	6 cut(s)	85, 105, 210, 260, 354, 1314
GsuI	CTGGAG	1 cut(s)	1161
HaeIII	GGCC	2 cut(s)	200, 1477
HapII	CCGG	6 cut(s)	213, 308, 897, 1329, 1505, 1578
HgaI	GACGC	2 cut(s)	1170, 1359
HhaI	GCGC	2 cut(s)	173, 186
Hin1II	CATG	7 cut(s)	448, 541, 663, 714, 992, 1168, 1570
Hin6I	GCGC	2 cut(s)	171, 184
HinP1I	GCGC	2 cut(s)	171, 184
HinfI	GANTC	5 cut(s)	232, 527, 611, 1120, 1409
HpaII	CCGG	6 cut(s)	213, 308, 897, 1329, 1505, 1578
HphI	GGTGA	4 cut(s)	419, 536, 751, 818
Hpy166II	GTNNAC	4 cut(s)	419, 976, 1262, 1471
Hpy188I	TCNGA	7 cut(s)	206, 373, 502, 694, 753, 1119, 1230
Hpy188III	TCNNGA	8 cut(s)	308, 531, 575, 1128, 1175, 1197, 1296, 1443
Hpy8I	GTNNAC	4 cut(s)	419, 976, 1262, 1471
Hpy99I	CGWCG	1 cut(s)	1164
HpyAV	CCTTC	5 cut(s)	513, 1094, 1134, 1200, 1295
HpyCH4III	ACNGT	7 cut(s)	1078, 1096, 1150, 1219, 1482, 1537, 1564
HpyCH4IV	ACGT	4 cut(s)	240, 1258, 1390, 1645
HpyF10VI	GCNNNNNNNGC	3 cut(s)	197, 206, 840
HpyF3I	CTNAG	3 cut(s)	95, 327, 750
HpySE526I	ACGT	4 cut(s)	240, 1258, 1390, 1645
Hsp92II	CATG	7 cut(s)	448, 541, 663, 714, 992, 1168, 1570
HspAI	GCGC	2 cut(s)	171, 184
Kpn2I	TCCGGA	1 cut(s)	307
KspI	CCGCGG	1 cut(s)	57
Kzo9I	GATC	8 cut(s)	267, 397, 463, 589, 826, 1204, 1230, 1507
LmnI	GCTCC	4 cut(s)	92, 104, 323, 911
Lsp1109I	GCAGC	4 cut(s)	71, 246, 340, 1300
LweI	GCATC	6 cut(s)	33, 830, 1301, 1406, 1466, 1532
MaeI	CTAG	1 cut(s)	1296
MaeII	ACGT	4 cut(s)	240, 1258, 1390, 1645
MaeIII	GTNAC	2 cut(s)	1546, 1580
MalI	GATC	8 cut(s)	269, 399, 465, 591, 828, 1206, 1232, 1509
MboI	GATC	8 cut(s)	267, 397, 463, 589, 826, 1204, 1230, 1507
MboII	GAAGA	8 cut(s)	109, 133, 620, 741, 1026, 1185, 1283, 1444
MflI	RGATCY	2 cut(s)	463, 1507
MhlI	GDGCHC	3 cut(s)	193, 1264, 1496
MlsI	TGGCCA	1 cut(s)	200
MluCI	AATT	8 cut(s)	31, 151, 547, 924, 940, 1008, 1131, 1527
MluNI	TGGCCA	1 cut(s)	200
MlyI	GAGTC	2 cut(s)	226, 1403
MmeI	TCCRAC	2 cut(s)	169, 946
Mox20I	TGGCCA	1 cut(s)	200
MroI	TCCGGA	1 cut(s)	307
MroXI	GAANNNNTTC	1 cut(s)	772
MscI	TGGCCA	1 cut(s)	200
MseI	TTAA	2 cut(s)	903, 1287
MslI	CAYNNNNRTG	2 cut(s)	993, 1402
Msp20I	TGGCCA	1 cut(s)	200
MspA1I	CMGCKG	2 cut(s)	56, 1313
MspI	CCGG	6 cut(s)	213, 308, 897, 1329, 1505, 1578
MspR9I	CCNGG	4 cut(s)	569, 1140, 1330, 1379
Mva1269I	GAATGC	1 cut(s)	888
MvaI	CCWGG	3 cut(s)	569, 1140, 1379
MvnI	CGCG	4 cut(s)	56, 171, 184, 186
MwoI	GCNNNNNNNGC	3 cut(s)	197, 206, 840
NciI	CCSGG	1 cut(s)	1330
NcoI	CCATGG	1 cut(s)	444
NdeI	CATATG	2 cut(s)	358, 1518
NdeII	GATC	8 cut(s)	267, 397, 463, 589, 826, 1204, 1230, 1507
NlaIII	CATG	7 cut(s)	448, 541, 663, 714, 992, 1168, 1570
NspI	RCATGY	1 cut(s)	663
NspV	TTCGAA	1 cut(s)	1012
PaeR7I	CTCGAG	1 cut(s)	1197
PaqCI	CACCTGC	1 cut(s)	29
PciI	ACATGT	1 cut(s)	659
PctI	GAATGC	1 cut(s)	888
PdmI	GAANNNNTTC	1 cut(s)	772
PfeI	GAWTC	3 cut(s)	527, 611, 1120
PinAI	ACCGGT	1 cut(s)	1577
PkrI	GCNGC	6 cut(s)	86, 106, 211, 261, 355, 1315
PleI	GAGTC	2 cut(s)	226, 1403
PpsI	GAGTC	2 cut(s)	226, 1403
PpuMI	RGGWCCY	1 cut(s)	364
PscI	ACATGT	1 cut(s)	659
PsiI	TTATAA	1 cut(s)	1082
Psp1406I	AACGTT	2 cut(s)	1390, 1645
Psp5II	RGGWCCY	1 cut(s)	364
Psp6I	CCWGG	3 cut(s)	567, 1138, 1377
PspEI	GGTNACC	1 cut(s)	1580
PspGI	CCWGG	3 cut(s)	567, 1138, 1377
PspPI	GGNCC	3 cut(s)	364, 449, 1074
PspPPI	RGGWCCY	1 cut(s)	364
PstI	CTGCAG	1 cut(s)	264
PsuI	RGATCY	2 cut(s)	463, 1507
PvuII	CAGCTG	1 cut(s)	1313
RsaI	GTAC	7 cut(s)	9, 587, 627, 715, 984, 1034, 1561
RsaNI	GTAC	7 cut(s)	8, 586, 626, 714, 983, 1033, 1560
RseI	CAYNNNNRTG	2 cut(s)	993, 1402
SacII	CCGCGG	1 cut(s)	57
SaqAI	TTAA	2 cut(s)	903, 1287
SatI	GCNGC	6 cut(s)	85, 105, 210, 260, 354, 1314
Sau3AI	GATC	8 cut(s)	267, 397, 463, 589, 826, 1204, 1230, 1507
Sau96I	GGNCC	3 cut(s)	364, 449, 1074
ScaI	AGTACT	1 cut(s)	984
SchI	GAGTC	2 cut(s)	226, 1403
ScrFI	CCNGG	4 cut(s)	569, 1140, 1330, 1379
SduI	GDGCHC	3 cut(s)	193, 1264, 1496
SfaNI	GCATC	6 cut(s)	33, 830, 1301, 1406, 1466, 1532
SfcI	CTRYAG	1 cut(s)	260
Sfr274I	CTCGAG	1 cut(s)	1197
Sfr303I	CCGCGG	1 cut(s)	57
SfuI	TTCGAA	1 cut(s)	1012
SgrBI	CCGCGG	1 cut(s)	57
SinI	GGWCC	3 cut(s)	364, 449, 1074
SlaI	CTCGAG	1 cut(s)	1197
SmiMI	CAYNNNNRTG	2 cut(s)	993, 1402
SmlI	CTYRAG	1 cut(s)	1197
SmoI	CTYRAG	1 cut(s)	1197
Sse9I	AATT	8 cut(s)	31, 151, 547, 924, 940, 1008, 1131, 1527
SspI	AATATT	1 cut(s)	1048
SspMI	CTAG	1 cut(s)	1296
StyD4I	CCNGG	4 cut(s)	567, 1138, 1328, 1377
StyI	CCWWGG	1 cut(s)	444
TaaI	ACNGT	7 cut(s)	1078, 1096, 1150, 1219, 1482, 1537, 1564
TaiI	ACGT	4 cut(s)	243, 1261, 1393, 1648
TaqI	TCGA	5 cut(s)	283, 1012, 1198, 1269, 1412
TasI	AATT	8 cut(s)	31, 151, 547, 924, 940, 1008, 1131, 1527
TatI	WGTACW	3 cut(s)	713, 982, 1032
TauI	GCSGC	2 cut(s)	107, 212
TfiI	GAWTC	3 cut(s)	527, 611, 1120
Tru1I	TTAA	2 cut(s)	903, 1287
Tru9I	TTAA	2 cut(s)	903, 1287
TscAI	CASTG	3 cut(s)	829, 850, 1252
TseI	GCWGC	4 cut(s)	84, 259, 353, 1313
TspDTI	ATGAA	3 cut(s)	554, 758, 1011
TspGWI	ACGGA	1 cut(s)	1500
TspRI	CASTG	3 cut(s)	829, 850, 1252
VneI	GTGCAC	1 cut(s)	1260
VpaK11BI	GGWCC	3 cut(s)	364, 449, 1074
XapI	RAATTY	4 cut(s)	924, 940, 1008, 1131
XbaI	TCTAGA	1 cut(s)	1295
XceI	RCATGY	1 cut(s)	663
XcmI	CCANNNNNNNNNTGG	2 cut(s)	842, 1485
XhoI	CTCGAG	1 cut(s)	1197
XmiI	GTMKAC	1 cut(s)	975
XmnI	GAANNNNTTC	1 cut(s)	772
XspI	CTAG	1 cut(s)	1296
ZrmI	AGTACT	1 cut(s)	984

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.