Rmu_sc0014208.1_g000008

Golgi vesicle prefusion complex stabilization

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014208.1
Physical Location & Seq
Reverse (-)
16672 .. 18523
1852 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014208.1_g000008.1.cds

Sequence Viewer

Length: 1416 bp
atggcaagctcaaggtcaaggtccaaaaccaaaacccagactacgattaaggttaacagcccccacattggtagcattgtgtttgacagtaacagccttcctccatctctttgggaagacggctacaggccaggcatcgtggctggcccaggggacccggaggacttgcctgaagtttttgacaaggtgatgaacagccctgaaggctttatgaagaattttgtgaagatgtttgataacctgttaacagacggctacaaggacttggctgtggagattgggaatagtcttacggaagagggtgttataccccagattgtgatcgtgacagggattattgatgagtatgctgaggctggcaagaccatggaggctctttatgtgttcaggatgatttgggaacattgtgccctcaatgcttacacttacagtgttatcatcaaagcactagctgcggatccggagcccaattttcttggggttgccaaggaatgtgtgatggagatgatggggaagggaatgcagcccaatgccaagacttacacggccgtgcttgaggcgtatgcagggcatgagaagatggaggagggcaagatgtttctgcaggagatgaaagctaatgggtttgtggcagacaggaaggcaatgagggagatgagaaatgttctcaagactaaacgatctctggtcaaaaccatcattgagattctgtttgataactcggaagactattcaggtgactcagaagatgatgatgatgctataaagaagtccaacaaaatgatggaatattttaactgccctcctgatggctatgttggcagcaaacacgtcattgaggacgatccagaaaaccccaaagatttggaacgagtcttcgacataatgtgcaagacagaacccctcatccacactttcaccaggatggtgaacatgctaaaaaaagatggatttctgtcccaagcccaggagataagggctgagtttgacttgggagtatatatacctgaagtcgtgacccacaccggcgtcattgagatctatgccaagagtgatcaagccaaggaggctcacaaggttttcctgcgcatgttatccctcggagttgctccaaatgcatacacttatagtgttatcattaaggcacttgctaaagactccaacttccttgaagatgctaagaagtacttgctggaaatgatggataagggaatgcagcctaatgccaggacatacacccctgtgtttaaagcctttgctcggctggaggaggataatgtgaagaaagggaaggagtttctgatggagatgaaagccaagggattcagggctaaaaagaaggctgtgatggaggttgtcaagggaagaaaaggaccagtggttgaaaccgttatcagtattctcttcggcaagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

471

Amino Acids

52.96

Weight (kDa)

5.64

Isoelectric Point (pI)

38.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1088
AccIII TCCGGA 1 cut(s) 460
AciI CCGC 1 cut(s) 455
AclWI GGATC 3 cut(s) 452, 465, 839
AcoI YGGCCR 1 cut(s) 546
AcsI RAATTY 1 cut(s) 217
AcuI CTGAAG 3 cut(s) 192, 222, 1029
AcyI GRCGYC 1 cut(s) 1029
AfaI GTAC 1 cut(s) 1187
AfiI CCNNNNNNNGG 4 cut(s) 68, 809, 967, 1260
AflIII ACRYGT 1 cut(s) 829
AgsI TTSAA 2 cut(s) 1172, 1385
AjiI CACGTC 1 cut(s) 832
AjnI CCWGG 5 cut(s) 130, 148, 920, 966, 1226
AleI CACNNNNGTG 2 cut(s) 548, 1241
AloI GAACNNNNNNTCC 2 cut(s) 891, 923
AluBI AGCT 3 cut(s) 9, 452, 617
AluI AGCT 3 cut(s) 9, 452, 617
AlwI GGATC 3 cut(s) 452, 465, 839
Aor13HI TCCGGA 1 cut(s) 460
AoxI GGCC 3 cut(s) 128, 145, 546
ApeKI GCWGC 4 cut(s) 452, 523, 822, 1216
ApoI RAATTY 1 cut(s) 217
AspLEI GCGC 1 cut(s) 1089
AspS9I GGNCC 4 cut(s) 21, 146, 154, 1373
AsuC2I CCSGG 1 cut(s) 158
AsuHPI GGTGA 4 cut(s) 199, 749, 910, 940
AvaII GGWCC 3 cut(s) 21, 154, 1373
BaeGI GKGCMC 1 cut(s) 412
BamHI GGATCC 1 cut(s) 457
BanII GRGCYC 1 cut(s) 468
BbsI GAAGAC 3 cut(s) 123, 732, 868
BbvCI CCTCAGC 1 cut(s) 351
BbvI GCAGC 4 cut(s) 439, 535, 834, 1228
BceAI ACGGC 4 cut(s) 136, 268, 533, 561
BciT130I CCWGG 5 cut(s) 132, 150, 922, 968, 1228
BclI TGATCA 1 cut(s) 1054
BcnI CCSGG 1 cut(s) 158
BfaI CTAG 1 cut(s) 449
BfmI CTRYAG 2 cut(s) 124, 602
BglI GCCNNNNNGGC 2 cut(s) 204, 1067
BglII AGATCT 1 cut(s) 1038
BisI GCNGC 4 cut(s) 453, 524, 823, 1217
BlsI GCNGC 4 cut(s) 454, 525, 824, 1218
BmcAI AGTACT 1 cut(s) 1187
Bme1390I CCNGG 6 cut(s) 132, 150, 158, 922, 968, 1228
Bme18I GGWCC 3 cut(s) 21, 154, 1373
BmgBI CACGTC 1 cut(s) 832
BmgT120I GGNCC 4 cut(s) 21, 146, 154, 1373
BmiI GGNNCC 4 cut(s) 155, 156, 459, 465
BmrFI CCNGG 6 cut(s) 132, 150, 158, 922, 968, 1228
BmsI GCATC 3 cut(s) 144, 748, 1165
BpiI GAAGAC 3 cut(s) 123, 732, 868
BpmI CTGGAG 1 cut(s) 1286
Bpu10I CCTNAGC 1 cut(s) 351
BpuEI CTTGAG 2 cut(s) 575, 653
BpuMI CCSGG 1 cut(s) 158
BsaBI GATNNNNATC 1 cut(s) 320
BsaHI GRCGYC 1 cut(s) 1029
BsaJI CCNNGG 8 cut(s) 148, 149, 366, 486, 966, 1062, 1099, 1317
BsaWI WCCGGW 1 cut(s) 460
Bsc4I CCNNNNNNNGG 4 cut(s) 68, 809, 967, 1260
Bse118I RCCGGY 1 cut(s) 1025
Bse1I ACTGG 1 cut(s) 1376
Bse3DI GCAATG 1 cut(s) 651
Bse8I GATNNNNATC 1 cut(s) 320
BseAI TCCGGA 1 cut(s) 460
BseBI CCWGG 5 cut(s) 132, 150, 922, 968, 1228
BseDI CCNNGG 8 cut(s) 148, 149, 366, 486, 966, 1062, 1099, 1317
BseGI GGATG 3 cut(s) 396, 906, 930
BseJI GATNNNNATC 1 cut(s) 320
BseLI CCNNNNNNNGG 4 cut(s) 68, 809, 967, 1260
BseMI GCAATG 1 cut(s) 651
BseMII CTCAG 3 cut(s) 342, 756, 972
BseNI ACTGG 1 cut(s) 1376
BseRI GAGGAG 2 cut(s) 599, 1283
BseSI GKGCMC 1 cut(s) 412
BseX3I CGGCCG 1 cut(s) 546
BseXI GCAGC 4 cut(s) 439, 535, 834, 1228
Bsh1285I CGRYCG 1 cut(s) 549
BshFI GGCC 3 cut(s) 130, 147, 548
BsiEI CGRYCG 1 cut(s) 549
BsiSI CCGG 3 cut(s) 158, 461, 1026
BslFI GGGAC 2 cut(s) 167, 943
BslI CCNNNNNNNGG 4 cut(s) 68, 809, 967, 1260
BsmFI GGGAC 2 cut(s) 167, 943
BsmI GAATGC 2 cut(s) 525, 1218
BsnI GGCC 3 cut(s) 130, 147, 548
Bsp1286I GDGCHC 2 cut(s) 412, 468
Bsp13I TCCGGA 1 cut(s) 460
Bsp143I GATC 6 cut(s) 321, 457, 680, 844, 1038, 1054
Bsp19I CCATGG 1 cut(s) 366
BspACI CCGC 1 cut(s) 455
BspANI GGCC 3 cut(s) 130, 147, 548
BspCNI CTCAG 3 cut(s) 343, 755, 973
BspEI TCCGGA 1 cut(s) 460
BspLI GGNNCC 4 cut(s) 155, 156, 459, 465
BspMAI CTGCAG 1 cut(s) 606
BspPI GGATC 3 cut(s) 452, 465, 839
BsrDI GCAATG 1 cut(s) 651
BsrFI RCCGGY 1 cut(s) 1025
BsrI ACTGG 1 cut(s) 1376
BssAI RCCGGY 1 cut(s) 1025
BssECI CCNNGG 8 cut(s) 148, 149, 366, 486, 966, 1062, 1099, 1317
BssMI GATC 6 cut(s) 321, 457, 680, 844, 1038, 1054
BssNI GRCGYC 1 cut(s) 1029
BssT1I CCWWGG 4 cut(s) 366, 486, 1062, 1317
Bst2UI CCWGG 5 cut(s) 132, 150, 922, 968, 1228
Bst4CI ACNGT 3 cut(s) 89, 431, 1390
Bst6I CTCTTC 2 cut(s) 291, 1409
BstACI GRCGYC 1 cut(s) 1029
BstAPI GCANNNNNTGC 1 cut(s) 452
BstC8I GCNNGC 3 cut(s) 7, 145, 358
BstDEI CTNAG 4 cut(s) 351, 742, 981, 1179
BstDSI CCRYGG 1 cut(s) 366
BstF5I GGATG 3 cut(s) 396, 906, 930
BstHHI GCGC 1 cut(s) 1089
BstKTI GATC 6 cut(s) 324, 460, 683, 847, 1041, 1057
BstMBI GATC 6 cut(s) 321, 457, 680, 844, 1038, 1054
BstMCI CGRYCG 1 cut(s) 549
BstMWI GCNNNNNNNGC 6 cut(s) 204, 416, 452, 819, 1067, 1115
BstNI CCWGG 5 cut(s) 132, 150, 922, 968, 1228
BstNSI RCATGY 2 cut(s) 937, 1093
BstSCI CCNGG 6 cut(s) 130, 148, 156, 920, 966, 1226
BstSFI CTRYAG 2 cut(s) 124, 602
BstSLI GKGCMC 1 cut(s) 412
BstV1I GCAGC 4 cut(s) 439, 535, 834, 1228
BstV2I GAAGAC 3 cut(s) 123, 732, 868
BstX2I RGATCY 2 cut(s) 457, 1038
BstXI CCANNNNNNTGG 2 cut(s) 111, 865
BstYI RGATCY 2 cut(s) 457, 1038
BstZI CGGCCG 1 cut(s) 546
BsuRI GGCC 3 cut(s) 130, 147, 548
BtgI CCRYGG 1 cut(s) 366
BtrI CACGTC 1 cut(s) 832
BtsCI GGATG 3 cut(s) 396, 906, 930
BtsIMutI CAGTG 2 cut(s) 436, 1383
Cac8I GCNNGC 3 cut(s) 7, 145, 358
CfoI GCGC 1 cut(s) 1089
Cfr10I RCCGGY 1 cut(s) 1025
Cfr13I GGNCC 4 cut(s) 21, 146, 154, 1373
CseI GACGC 1 cut(s) 1018
Csp6I GTAC 1 cut(s) 1186
CviAII CATG 4 cut(s) 367, 572, 934, 1090
CviQI GTAC 1 cut(s) 1186
DdeI CTNAG 4 cut(s) 351, 742, 981, 1179
DpnI GATC 6 cut(s) 323, 459, 682, 846, 1040, 1056
DpnII GATC 6 cut(s) 321, 457, 680, 844, 1038, 1054
DraI TTTAAA 1 cut(s) 1249
EaeI YGGCCR 1 cut(s) 546
EagI CGGCCG 1 cut(s) 546
Eam1104I CTCTTC 2 cut(s) 291, 1409
EarI CTCTTC 2 cut(s) 291, 1409
EclXI CGGCCG 1 cut(s) 546
Eco130I CCWWGG 4 cut(s) 366, 486, 1062, 1317
Eco24I GRGCYC 1 cut(s) 468
Eco47I GGWCC 3 cut(s) 21, 154, 1373
Eco52I CGGCCG 1 cut(s) 546
Eco57I CTGAAG 3 cut(s) 192, 222, 1029
EcoO109I RGGNCCY 1 cut(s) 154
EcoRII CCWGG 5 cut(s) 130, 148, 920, 966, 1226
EcoT14I CCWWGG 4 cut(s) 366, 486, 1062, 1317
EcoT22I ATGCAT 1 cut(s) 1120
EcoT38I GRGCYC 1 cut(s) 468
ErhI CCWWGG 4 cut(s) 366, 486, 1062, 1317
FaeI CATG 4 cut(s) 370, 575, 937, 1093
FalI AAGNNNNNCTT 2 cut(s) 1172, 1204
FaqI GGGAC 2 cut(s) 167, 943
FatI CATG 4 cut(s) 366, 571, 933, 1089
FbaI TGATCA 1 cut(s) 1054
Fnu4HI GCNGC 4 cut(s) 453, 524, 823, 1217
FokI GGATG 3 cut(s) 403, 893, 937
FriOI GRGCYC 1 cut(s) 468
Fsp4HI GCNGC 4 cut(s) 453, 524, 823, 1217
FspBI CTAG 1 cut(s) 449
FspI TGCGCA 1 cut(s) 1088
GlaI GCGC 1 cut(s) 1088
GluI GCNGC 4 cut(s) 453, 524, 823, 1217
GsuI CTGGAG 1 cut(s) 1286
HaeIII GGCC 3 cut(s) 130, 147, 548
HapII CCGG 3 cut(s) 158, 461, 1026
HgaI GACGC 1 cut(s) 1018
HhaI GCGC 1 cut(s) 1089
Hin1I GRCGYC 1 cut(s) 1029
Hin1II CATG 4 cut(s) 370, 575, 937, 1093
Hin6I GCGC 1 cut(s) 1087
HinP1I GCGC 1 cut(s) 1087
HincII GTYRAC 2 cut(s) 55, 246
HindII GTYRAC 2 cut(s) 55, 246
HinfI GANTC 5 cut(s) 706, 740, 873, 1157, 1323
HpaI GTTAAC 2 cut(s) 55, 246
HpaII CCGG 3 cut(s) 158, 461, 1026
HphI GGTGA 4 cut(s) 199, 749, 910, 940
Hpy166II GTNNAC 3 cut(s) 55, 246, 931
Hpy188I TCNGA 4 cut(s) 724, 745, 1103, 1302
Hpy188III TCNNGA 7 cut(s) 325, 388, 461, 670, 806, 848, 1015
Hpy8I GTNNAC 3 cut(s) 55, 246, 931
HpyAV CCTTC 6 cut(s) 107, 197, 508, 634, 1285, 1333
HpyCH4III ACNGT 3 cut(s) 89, 431, 1390
HpyCH4IV ACGT 1 cut(s) 831
HpyCH4V TGCA 6 cut(s) 523, 566, 604, 891, 1118, 1216
HpyF10VI GCNNNNNNNGC 6 cut(s) 204, 416, 452, 819, 1067, 1115
HpyF3I CTNAG 4 cut(s) 351, 742, 981, 1179
HpySE526I ACGT 1 cut(s) 831
Hsp92I GRCGYC 1 cut(s) 1029
Hsp92II CATG 4 cut(s) 370, 575, 937, 1093
HspAI GCGC 1 cut(s) 1087
KflI GGGWCCC 1 cut(s) 154
Kpn2I TCCGGA 1 cut(s) 460
Ksp22I TGATCA 1 cut(s) 1054
KspAI GTTAAC 2 cut(s) 55, 246
Kzo9I GATC 6 cut(s) 321, 457, 680, 844, 1038, 1054
LmnI GCTCC 2 cut(s) 463, 1114
Lsp1109I GCAGC 4 cut(s) 439, 535, 834, 1228
LweI GCATC 3 cut(s) 144, 748, 1165
MaeI CTAG 1 cut(s) 449
MaeII ACGT 1 cut(s) 831
MaeIII GTNAC 4 cut(s) 89, 325, 737, 1015
MalI GATC 6 cut(s) 323, 459, 682, 846, 1040, 1056
MboI GATC 6 cut(s) 321, 457, 680, 844, 1038, 1054
MflI RGATCY 2 cut(s) 457, 1038
MhlI GDGCHC 2 cut(s) 412, 468
MluCI AATT 2 cut(s) 217, 469
MlyI GAGTC 3 cut(s) 734, 882, 1151
MmeI TCCRAC 2 cut(s) 798, 1185
Mph1103I ATGCAT 1 cut(s) 1120
MroI TCCGGA 1 cut(s) 460
MseI TTAA 6 cut(s) 48, 54, 245, 795, 1140, 1248
MslI CAYNNNNRTG 3 cut(s) 548, 923, 1241
MspI CCGG 3 cut(s) 158, 461, 1026
MspR9I CCNGG 6 cut(s) 132, 150, 158, 922, 968, 1228
Mva1269I GAATGC 2 cut(s) 525, 1218
MvaI CCWGG 5 cut(s) 132, 150, 922, 968, 1228
MwoI GCNNNNNNNGC 6 cut(s) 204, 416, 452, 819, 1067, 1115
NciI CCSGG 1 cut(s) 158
NcoI CCATGG 1 cut(s) 366
NdeII GATC 6 cut(s) 321, 457, 680, 844, 1038, 1054
NlaIII CATG 4 cut(s) 370, 575, 937, 1093
NlaIV GGNNCC 4 cut(s) 155, 156, 459, 465
NmeAIII GCCGAG 1 cut(s) 1240
NmuCI GTSAC 3 cut(s) 325, 737, 1015
NsbI TGCGCA 1 cut(s) 1088
NsiI ATGCAT 1 cut(s) 1120
NspI RCATGY 2 cut(s) 937, 1093
OliI CACNNNNGTG 2 cut(s) 548, 1241
PasI CCCWGGG 1 cut(s) 149
PctI GAATGC 2 cut(s) 525, 1218
PfeI GAWTC 2 cut(s) 706, 1323
PkrI GCNGC 4 cut(s) 454, 525, 824, 1218
PleI GAGTC 3 cut(s) 734, 881, 1151
PpsI GAGTC 3 cut(s) 734, 881, 1151
PpuMI RGGWCCY 1 cut(s) 154
Psp5II RGGWCCY 1 cut(s) 154
Psp6I CCWGG 5 cut(s) 130, 148, 920, 966, 1226
PspGI CCWGG 5 cut(s) 130, 148, 920, 966, 1226
PspN4I GGNNCC 4 cut(s) 155, 156, 459, 465
PspPI GGNCC 4 cut(s) 21, 146, 154, 1373
PspPPI RGGWCCY 1 cut(s) 154
PstI CTGCAG 1 cut(s) 606
PsuI RGATCY 2 cut(s) 457, 1038
RsaI GTAC 1 cut(s) 1187
RsaNI GTAC 1 cut(s) 1186
RseI CAYNNNNRTG 3 cut(s) 548, 923, 1241
SaqAI TTAA 6 cut(s) 48, 54, 245, 795, 1140, 1248
SatI GCNGC 4 cut(s) 453, 524, 823, 1217
Sau3AI GATC 6 cut(s) 321, 457, 680, 844, 1038, 1054
Sau96I GGNCC 4 cut(s) 21, 146, 154, 1373
ScaI AGTACT 1 cut(s) 1187
SchI GAGTC 3 cut(s) 734, 882, 1151
ScrFI CCNGG 6 cut(s) 132, 150, 158, 922, 968, 1228
SduI GDGCHC 2 cut(s) 412, 468
SfaNI GCATC 3 cut(s) 144, 748, 1165
SfcI CTRYAG 2 cut(s) 124, 602
SgrAI CRCCGGYG 1 cut(s) 1025
SinI GGWCC 3 cut(s) 21, 154, 1373
SmiMI CAYNNNNRTG 3 cut(s) 548, 923, 1241
SmlI CTYRAG 3 cut(s) 10, 554, 668
SmoI CTYRAG 3 cut(s) 10, 554, 668
Sse9I AATT 2 cut(s) 217, 469
SsiI CCGC 1 cut(s) 455
SspI AATATT 1 cut(s) 791
SspMI CTAG 1 cut(s) 449
StyD4I CCNGG 6 cut(s) 130, 148, 156, 920, 966, 1226
StyI CCWWGG 4 cut(s) 366, 486, 1062, 1317
TaaI ACNGT 3 cut(s) 89, 431, 1390
TaiI ACGT 1 cut(s) 834
TaqI TCGA 1 cut(s) 879
TasI AATT 2 cut(s) 217, 469
TatI WGTACW 1 cut(s) 1185
TfiI GAWTC 2 cut(s) 706, 1323
Tru1I TTAA 6 cut(s) 48, 54, 245, 795, 1140, 1248
Tru9I TTAA 6 cut(s) 48, 54, 245, 795, 1140, 1248
TscAI CASTG 2 cut(s) 436, 1383
TseFI GTSAC 3 cut(s) 325, 737, 1015
TseI GCWGC 4 cut(s) 452, 523, 822, 1216
Tsp45I GTSAC 3 cut(s) 325, 737, 1015
TspDTI ATGAA 4 cut(s) 206, 227, 626, 1325
TspGWI ACGGA 1 cut(s) 308
TspRI CASTG 2 cut(s) 436, 1383
VpaK11BI GGWCC 3 cut(s) 21, 154, 1373
XapI RAATTY 1 cut(s) 217
XceI RCATGY 2 cut(s) 937, 1093
XcmI CCANNNNNNNNNTGG 1 cut(s) 781
XspI CTAG 1 cut(s) 449
ZrmI AGTACT 1 cut(s) 1187
Zsp2I ATGCAT 1 cut(s) 1120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.