Rmu_sc0020809.1_g000002

Acts as a Mg(2 ) transporter. Can also transport other divalent cations such as Fe(2 ), Sr(2 ), Ba(2 ), Mn(2 ) and Co(2 ) but to a much less extent than Mg(2 )

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020809.1
Physical Location & Seq
Reverse (-)
3068 .. 4918
1851 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020809.1_g000002.1.cds

Sequence Viewer

Length: 435 bp
atgggctctctcactgttatgagtgtgaaagcagtgggtatcgctctgaagctgtccttttcaggaacaaaccaatttaaatactatgagacatgggtttttgcagtgatagtggcagtctgttgtatttttcagattaactatttaaacaaggctctggacacctttaacactgctgtaatatctccagtctactatgtgatgtttacaatattcaccattcttgccagcgttatcatgtttaaggactgggagtcgcaaagtgcgtctcagattgtgactgaattgtgtggttttgttactatcctatctggtacctttctacttcacaaaaccagagatatgggaaatgatccacctaaggaacctcctgtcttccaaagtcctcgtgcgtcagaagcaccttcatctccacttcctattagccagagatag

Protein Analysis

144

Amino Acids

15.96

Weight (kDa)

7.68

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 314
AccB1I GGYRCC 1 cut(s) 314
AccI GTMKAC 1 cut(s) 192
AclWI GGATC 1 cut(s) 347
AcuI CTGAAG 1 cut(s) 68
AfaI GTAC 1 cut(s) 316
AhdI GACNNNNNGTC 1 cut(s) 253
AluBI AGCT 1 cut(s) 52
AluI AGCT 1 cut(s) 52
Alw26I GTCTC 2 cut(s) 83, 273
AlwI GGATC 1 cut(s) 347
Asp718I GGTACC 1 cut(s) 314
AsuHPI GGTGA 1 cut(s) 208
AxyI CCTNAGG 1 cut(s) 360
BanI GGYRCC 1 cut(s) 314
BanII GRGCYC 1 cut(s) 8
BauI CACGAG 1 cut(s) 387
BbsI GAAGAC 1 cut(s) 367
BcoDI GTCTC 2 cut(s) 83, 273
BmeRI GACNNNNNGTC 1 cut(s) 253
BmiI GGNNCC 2 cut(s) 316, 366
BmrI ACTGGG 1 cut(s) 259
BmuI ACTGGG 1 cut(s) 259
BpiI GAAGAC 1 cut(s) 367
BpmI CTGGAG 1 cut(s) 171
Bse1I ACTGG 2 cut(s) 188, 254
Bse21I CCTNAGG 1 cut(s) 360
BseMII CTCAG 1 cut(s) 284
BseNI ACTGG 2 cut(s) 188, 254
BshNI GGYRCC 1 cut(s) 314
BsmAI GTCTC 2 cut(s) 83, 273
BsmBI CGTCTC 1 cut(s) 273
Bsp1286I GDGCHC 1 cut(s) 8
Bsp143I GATC 1 cut(s) 352
BspCNI CTCAG 1 cut(s) 283
BspLI GGNNCC 2 cut(s) 316, 366
BspPI GGATC 1 cut(s) 347
BspT107I GGYRCC 1 cut(s) 314
BsrI ACTGG 2 cut(s) 188, 254
BssMI GATC 1 cut(s) 352
BssSI CACGAG 1 cut(s) 387
Bst2BI CACGAG 1 cut(s) 387
Bst4CI ACNGT 1 cut(s) 16
BstC8I GCNNGC 1 cut(s) 229
BstDEI CTNAG 2 cut(s) 270, 360
BstKTI GATC 1 cut(s) 355
BstMAI GTCTC 2 cut(s) 83, 273
BstMBI GATC 1 cut(s) 352
BstMWI GCNNNNNNNGC 1 cut(s) 398
BstV2I GAAGAC 1 cut(s) 367
BstXI CCANNNNNNTGG 1 cut(s) 343
Bsu36I CCTNAGG 1 cut(s) 360
BtsI GCAGTG 3 cut(s) 39, 111, 171
BtsIMutI CAGTG 4 cut(s) 12, 39, 111, 171
Cac8I GCNNGC 1 cut(s) 229
CseI GACGC 2 cut(s) 255, 381
Csp6I GTAC 1 cut(s) 315
CviAII CATG 2 cut(s) 93, 238
CviJI RGCY 4 cut(s) 6, 52, 155, 426
CviKI_1 RGCY 4 cut(s) 6, 52, 155, 426
CviQI GTAC 1 cut(s) 315
DdeI CTNAG 2 cut(s) 270, 360
DpnI GATC 1 cut(s) 354
DpnII GATC 1 cut(s) 352
DraI TTTAAA 2 cut(s) 79, 147
DriI GACNNNNNGTC 1 cut(s) 253
Eam1105I GACNNNNNGTC 1 cut(s) 253
Eco24I GRGCYC 1 cut(s) 8
Eco57I CTGAAG 1 cut(s) 68
Eco81I CCTNAGG 1 cut(s) 360
EcoT38I GRGCYC 1 cut(s) 8
Esp3I CGTCTC 1 cut(s) 273
FaeI CATG 2 cut(s) 96, 241
FaiI YATR 6 cut(s) 20, 87, 94, 198, 239, 344
FalI AAGNNNNNCTT 2 cut(s) 41, 73
FatI CATG 2 cut(s) 92, 237
FblI GTMKAC 1 cut(s) 192
FriOI GRGCYC 1 cut(s) 8
GsuI CTGGAG 1 cut(s) 171
HgaI GACGC 2 cut(s) 255, 381
Hin1II CATG 2 cut(s) 96, 241
HinfI GANTC 1 cut(s) 254
HphI GGTGA 1 cut(s) 208
Hpy166II GTNNAC 2 cut(s) 193, 207
Hpy188I TCNGA 4 cut(s) 48, 135, 273, 397
Hpy188III TCNNGA 2 cut(s) 63, 158
Hpy8I GTNNAC 2 cut(s) 193, 207
HpyAV CCTTC 1 cut(s) 414
HpyCH4III ACNGT 1 cut(s) 16
HpyCH4V TGCA 1 cut(s) 104
HpyF10VI GCNNNNNNNGC 1 cut(s) 398
HpyF3I CTNAG 2 cut(s) 270, 360
Hsp92II CATG 2 cut(s) 96, 241
KpnI GGTACC 1 cut(s) 318
Kzo9I GATC 1 cut(s) 352
LpnPI CCDG 8 cut(s) 48, 143, 201, 235, 241, 297, 349, 384
MaeIII GTNAC 2 cut(s) 277, 298
MalI GATC 1 cut(s) 354
MboI GATC 1 cut(s) 352
MboII GAAGA 1 cut(s) 367
MhlI GDGCHC 1 cut(s) 8
MluCI AATT 2 cut(s) 74, 284
MlyI GAGTC 1 cut(s) 263
MnlI CCTC 2 cut(s) 378, 396
MseI TTAA 5 cut(s) 78, 138, 146, 168, 243
MslI CAYNNNNRTG 1 cut(s) 17
MwoI GCNNNNNNNGC 1 cut(s) 398
NdeII GATC 1 cut(s) 352
NlaIII CATG 2 cut(s) 96, 241
NlaIV GGNNCC 2 cut(s) 316, 366
NmuCI GTSAC 1 cut(s) 277
PcsI WCGNNNNNNNCGW 1 cut(s) 263
PleI GAGTC 1 cut(s) 262
PpsI GAGTC 1 cut(s) 262
PspN4I GGNNCC 2 cut(s) 316, 366
RsaI GTAC 1 cut(s) 316
RsaNI GTAC 1 cut(s) 315
RseI CAYNNNNRTG 1 cut(s) 17
SaqAI TTAA 5 cut(s) 78, 138, 146, 168, 243
Sau3AI GATC 1 cut(s) 352
SchI GAGTC 1 cut(s) 263
SduI GDGCHC 1 cut(s) 8
SetI ASST 6 cut(s) 54, 167, 320, 361, 370, 406
SmiI ATTTAAAT 1 cut(s) 79
SmiMI CAYNNNNRTG 1 cut(s) 17
Sse9I AATT 2 cut(s) 74, 284
SspI AATATT 1 cut(s) 213
SwaI ATTTAAAT 1 cut(s) 79
TaaI ACNGT 1 cut(s) 16
TasI AATT 2 cut(s) 74, 284
Tru1I TTAA 5 cut(s) 78, 138, 146, 168, 243
Tru9I TTAA 5 cut(s) 78, 138, 146, 168, 243
TscAI CASTG 4 cut(s) 19, 39, 111, 178
TseFI GTSAC 1 cut(s) 277
Tsp45I GTSAC 1 cut(s) 277
TspDTI ATGAA 1 cut(s) 396
TspRI CASTG 4 cut(s) 19, 39, 111, 178
XmiI GTMKAC 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.