Rh4DG178200

Acts as a Mg(2 ) transporter. Can also transport other divalent cations such as Fe(2 ), Sr(2 ), Ba(2 ), Mn(2 ) and Co(2 ) but to a much less extent than Mg(2 )

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
35253262 .. 35257835
4574 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG178200.1

Sequence Viewer

Length: 855 bp
ATGGGATTGTCGCCTGACAATGTTCATGGACTCACTCTAGCGGTTTCTTCAAGCGTTTTTATTGGGACTAGCTTTATAATCAAGAAGAAAGGCCTCAAAAAAGCAGGCACTACAGGAGTTAGAGCAGGGTCTGGAGGGCATACATACTTGTATGAACCCTTATGGTGGGCTGGGATGATATCAATGATTGTGGGGGAGATAGCTAATTTTGCTGCTTATGCATTTGCTCCAGCAATTCTTGTAACTCCCTTGGGAGCATTAAGTATTATCGTCAGTGCAGTGCTTGCTCATTTTGTTTTGGAGGAAAAACTGCATATATTTGGGGTGCTTGGTTGTGTTCTTTGCATGGTGGGCTCTACAACTATTGTTTTGAATGCTCCACAAGAGAGACAAATAAATTCTGTTAAGCAAGTGTGGCATCATGCTACACAGCCAGGTTTTATTGTCTACACAGTTTTCGTACTGATTCTCGTTGCCGTCCTCATTTTCCAATTTGTTCCACGTTATGGGAAGACCCACCTGATCGTATATGTTGGAATTTGTTCTCTTATGGGCTCTCTCACGGTTATGAGTGTGAAAGCAGTGGGTATCGCTCTGAAGCTGTCCTTTTCAGGAACAAACCAATTTAAATACTATGAGACATGGGTTTTTGCAGTGATAGTGGCAGACTGGGAGTCGCAAAGTGCGTCTCAGATTGTGACTGAATTGTGTGGTTTTGTTACTATCCTATCTGGTACCTTTCTACTTCACAAAACCAGAGATATGGGAAATGATCCACCTAAGGAACCTCCTGTCTTCCAAAGTCCTCGTGCGTCAGAAGCACCTTCATCTCCACTTCCTATTAGCCAGAGATAG

Protein Analysis

284

Amino Acids

30.65

Weight (kDa)

9.02

Isoelectric Point (pI)

29.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mg_trans_NIPA PF05653 6 - 221 5.4e-98 Magnesium transporter NIPA
Mg_trans_NIPA PF05653 219 - 255 4.7e-07 Magnesium transporter NIPA
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 77
Acc65I GGTACC 1 cut(s) 734
AccB1I GGYRCC 1 cut(s) 734
AccB7I CCANNNNNTGG 1 cut(s) 506
AccI GTMKAC 1 cut(s) 447
AciI CCGC 1 cut(s) 41
AclWI GGATC 1 cut(s) 767
AcsI RAATTY 2 cut(s) 397, 537
AcuI CTGAAG 1 cut(s) 617
AfaI GTAC 2 cut(s) 462, 736
AfiI CCNNNNNNNGG 2 cut(s) 165, 506
AgsI TTSAA 2 cut(s) 51, 373
AhdI GACNNNNNGTC 1 cut(s) 673
AjnI CCWGG 1 cut(s) 433
AluBI AGCT 3 cut(s) 72, 203, 601
AluI AGCT 3 cut(s) 72, 203, 601
Alw26I GTCTC 3 cut(s) 382, 632, 693
AlwI GGATC 1 cut(s) 767
AlwNI CAGNNNCTG 1 cut(s) 131
AoxI GGCC 1 cut(s) 91
ApeKI GCWGC 1 cut(s) 212
ApoI RAATTY 2 cut(s) 397, 537
Asp700I GAANNNNTTC 1 cut(s) 541
Asp718I GGTACC 1 cut(s) 734
AxyI CCTNAGG 1 cut(s) 780
BanI GGYRCC 1 cut(s) 734
BanII GRGCYC 2 cut(s) 356, 557
BauI CACGAG 1 cut(s) 807
BbsI GAAGAC 2 cut(s) 518, 787
BbvI GCAGC 1 cut(s) 199
BceAI ACGGC 1 cut(s) 461
BciT130I CCWGG 1 cut(s) 435
BcoDI GTCTC 3 cut(s) 382, 632, 693
BfaI CTAG 2 cut(s) 38, 69
BfmI CTRYAG 1 cut(s) 111
BisI GCNGC 1 cut(s) 213
BlsI GCNGC 1 cut(s) 214
Bme1390I CCNGG 1 cut(s) 435
BmeRI GACNNNNNGTC 1 cut(s) 673
BmiI GGNNCC 2 cut(s) 736, 786
BmrFI CCNGG 1 cut(s) 435
BmrI ACTGGG 1 cut(s) 679
BmsI GCATC 1 cut(s) 427
BmuI ACTGGG 1 cut(s) 679
BpiI GAAGAC 2 cut(s) 518, 787
BpmI CTGGAG 2 cut(s) 153, 213
BsaJI CCNNGG 1 cut(s) 249
Bsc4I CCNNNNNNNGG 2 cut(s) 165, 506
Bse1I ACTGG 1 cut(s) 674
Bse21I CCTNAGG 1 cut(s) 780
BseBI CCWGG 1 cut(s) 435
BseDI CCNNGG 1 cut(s) 249
BseGI GGATG 1 cut(s) 180
BseLI CCNNNNNNNGG 2 cut(s) 165, 506
BseMII CTCAG 1 cut(s) 704
BseNI ACTGG 1 cut(s) 674
BseXI GCAGC 1 cut(s) 199
BseYI CCCAGC 1 cut(s) 170
BsgI GTGCAG 1 cut(s) 297
BshFI GGCC 1 cut(s) 93
BshNI GGYRCC 1 cut(s) 734
BslFI GGGAC 1 cut(s) 79
BslI CCNNNNNNNGG 2 cut(s) 165, 506
BsmAI GTCTC 3 cut(s) 382, 632, 693
BsmBI CGTCTC 1 cut(s) 693
BsmFI GGGAC 1 cut(s) 79
BsmI GAATGC 1 cut(s) 379
BsnI GGCC 1 cut(s) 93
Bsp1286I GDGCHC 2 cut(s) 356, 557
Bsp143I GATC 2 cut(s) 522, 772
BspACI CCGC 1 cut(s) 41
BspANI GGCC 1 cut(s) 93
BspCNI CTCAG 1 cut(s) 703
BspLI GGNNCC 2 cut(s) 736, 786
BspPI GGATC 1 cut(s) 767
BspT107I GGYRCC 1 cut(s) 734
BsrI ACTGG 1 cut(s) 674
BssECI CCNNGG 1 cut(s) 249
BssMI GATC 2 cut(s) 522, 772
BssSI CACGAG 1 cut(s) 807
BssT1I CCWWGG 1 cut(s) 249
Bst2BI CACGAG 1 cut(s) 807
Bst2UI CCWGG 1 cut(s) 435
Bst4CI ACNGT 2 cut(s) 454, 565
BstAPI GCANNNNNTGC 1 cut(s) 284
BstC8I GCNNGC 2 cut(s) 106, 285
BstDEI CTNAG 2 cut(s) 690, 780
BstF5I GGATG 1 cut(s) 180
BstKTI GATC 2 cut(s) 525, 775
BstMAI GTCTC 3 cut(s) 382, 632, 693
BstMBI GATC 2 cut(s) 522, 772
BstMWI GCNNNNNNNGC 6 cut(s) 209, 218, 284, 351, 415, 818
BstNI CCWGG 1 cut(s) 435
BstSCI CCNGG 1 cut(s) 433
BstSFI CTRYAG 1 cut(s) 111
BstV1I GCAGC 1 cut(s) 199
BstV2I GAAGAC 2 cut(s) 518, 787
BstXI CCANNNNNNTGG 1 cut(s) 763
Bsu36I CCTNAGG 1 cut(s) 780
BsuRI GGCC 1 cut(s) 93
BtsCI GGATG 1 cut(s) 180
BtsI GCAGTG 3 cut(s) 285, 588, 660
BtsIMutI CAGTG 4 cut(s) 280, 285, 588, 660
Cac8I GCNNGC 2 cut(s) 106, 285
CaiI CAGNNNCTG 1 cut(s) 131
CseI GACGC 2 cut(s) 675, 801
Csp6I GTAC 2 cut(s) 461, 735
CspCI CAANNNNNGTGG 2 cut(s) 171, 206
CviAII CATG 4 cut(s) 26, 346, 422, 642
CviJI RGCY 9 cut(s) 72, 93, 170, 203, 354, 433, 555, 601, 846
CviKI_1 RGCY 9 cut(s) 72, 93, 170, 203, 354, 433, 555, 601, 846
CviQI GTAC 2 cut(s) 461, 735
DdeI CTNAG 2 cut(s) 690, 780
DpnI GATC 2 cut(s) 524, 774
DpnII GATC 2 cut(s) 522, 772
DraI TTTAAA 1 cut(s) 628
DriI GACNNNNNGTC 1 cut(s) 673
Eam1105I GACNNNNNGTC 1 cut(s) 673
Eco130I CCWWGG 1 cut(s) 249
Eco147I AGGCCT 1 cut(s) 93
Eco24I GRGCYC 2 cut(s) 356, 557
Eco32I GATATC 1 cut(s) 180
Eco57I CTGAAG 1 cut(s) 617
Eco81I CCTNAGG 1 cut(s) 780
EcoRII CCWGG 1 cut(s) 433
EcoRV GATATC 1 cut(s) 180
EcoT14I CCWWGG 1 cut(s) 249
EcoT22I ATGCAT 1 cut(s) 223
EcoT38I GRGCYC 2 cut(s) 356, 557
ErhI CCWWGG 1 cut(s) 249
Esp3I CGTCTC 1 cut(s) 693
FaeI CATG 4 cut(s) 29, 349, 425, 645
FalI AAGNNNNNCTT 2 cut(s) 590, 622
FaqI GGGAC 1 cut(s) 79
FatI CATG 4 cut(s) 25, 345, 421, 641
FblI GTMKAC 1 cut(s) 447
Fnu4HI GCNGC 1 cut(s) 213
FokI GGATG 1 cut(s) 187
FriOI GRGCYC 2 cut(s) 356, 557
Fsp4HI GCNGC 1 cut(s) 213
FspBI CTAG 2 cut(s) 38, 69
GluI GCNGC 1 cut(s) 213
GsaI CCCAGC 1 cut(s) 174
GsuI CTGGAG 2 cut(s) 153, 213
HaeIII GGCC 1 cut(s) 93
HgaI GACGC 2 cut(s) 675, 801
Hin1II CATG 4 cut(s) 29, 349, 425, 645
HinfI GANTC 3 cut(s) 30, 466, 674
Hpy166II GTNNAC 1 cut(s) 448
Hpy188I TCNGA 3 cut(s) 597, 693, 817
Hpy188III TCNNGA 3 cut(s) 82, 132, 612
Hpy8I GTNNAC 1 cut(s) 448
HpyAV CCTTC 1 cut(s) 834
HpyCH4III ACNGT 2 cut(s) 454, 565
HpyCH4IV ACGT 1 cut(s) 502
HpyCH4V TGCA 5 cut(s) 221, 278, 313, 345, 653
HpyF10VI GCNNNNNNNGC 6 cut(s) 209, 218, 284, 351, 415, 818
HpyF3I CTNAG 2 cut(s) 690, 780
HpySE526I ACGT 1 cut(s) 502
Hsp92II CATG 4 cut(s) 29, 349, 425, 645
KpnI GGTACC 1 cut(s) 738
Kzo9I GATC 2 cut(s) 522, 772
LmnI GCTCC 3 cut(s) 232, 254, 382
Lsp1109I GCAGC 1 cut(s) 199
LweI GCATC 1 cut(s) 427
MaeI CTAG 2 cut(s) 38, 69
MaeII ACGT 1 cut(s) 502
MaeIII GTNAC 3 cut(s) 241, 697, 718
MalI GATC 2 cut(s) 524, 774
MboI GATC 2 cut(s) 522, 772
MboII GAAGA 4 cut(s) 39, 97, 523, 787
MhlI GDGCHC 2 cut(s) 356, 557
MluCI AATT 7 cut(s) 205, 234, 397, 491, 537, 623, 704
MlyI GAGTC 2 cut(s) 24, 683
MmeI TCCRAC 1 cut(s) 514
MnlI CCTC 6 cut(s) 104, 128, 295, 491, 798, 816
Mph1103I ATGCAT 1 cut(s) 223
MroXI GAANNNNTTC 1 cut(s) 541
MseI TTAA 3 cut(s) 260, 405, 627
MslI CAYNNNNRTG 1 cut(s) 566
MspR9I CCNGG 1 cut(s) 435
Mva1269I GAATGC 1 cut(s) 379
MvaI CCWGG 1 cut(s) 435
MwoI GCNNNNNNNGC 6 cut(s) 209, 218, 284, 351, 415, 818
NdeII GATC 2 cut(s) 522, 772
NlaIII CATG 4 cut(s) 29, 349, 425, 645
NlaIV GGNNCC 2 cut(s) 736, 786
NmuCI GTSAC 1 cut(s) 697
NsiI ATGCAT 1 cut(s) 223
PceI AGGCCT 1 cut(s) 93
PcsI WCGNNNNNNNCGW 1 cut(s) 683
PctI GAATGC 1 cut(s) 379
PdmI GAANNNNTTC 1 cut(s) 541
PfeI GAWTC 1 cut(s) 466
PflMI CCANNNNNTGG 1 cut(s) 506
PkrI GCNGC 1 cut(s) 214
PleI GAGTC 2 cut(s) 24, 682
PpsI GAGTC 2 cut(s) 24, 682
PsiI TTATAA 1 cut(s) 77
Psp6I CCWGG 1 cut(s) 433
PspFI CCCAGC 1 cut(s) 170
PspGI CCWGG 1 cut(s) 433
PspN4I GGNNCC 2 cut(s) 736, 786
PstNI CAGNNNCTG 1 cut(s) 131
RsaI GTAC 2 cut(s) 462, 736
RsaNI GTAC 2 cut(s) 461, 735
RseI CAYNNNNRTG 1 cut(s) 566
SaqAI TTAA 3 cut(s) 260, 405, 627
SatI GCNGC 1 cut(s) 213
Sau3AI GATC 2 cut(s) 522, 772
SchI GAGTC 2 cut(s) 24, 683
ScrFI CCNGG 1 cut(s) 435
SduI GDGCHC 2 cut(s) 356, 557
SfaNI GCATC 1 cut(s) 427
SfcI CTRYAG 1 cut(s) 111
SmiI ATTTAAAT 1 cut(s) 628
SmiMI CAYNNNNRTG 1 cut(s) 566
Sse9I AATT 7 cut(s) 205, 234, 397, 491, 537, 623, 704
SseBI AGGCCT 1 cut(s) 93
SsiI CCGC 1 cut(s) 41
SspMI CTAG 2 cut(s) 38, 69
StuI AGGCCT 1 cut(s) 93
StyD4I CCNGG 1 cut(s) 433
StyI CCWWGG 1 cut(s) 249
SwaI ATTTAAAT 1 cut(s) 628
TaaI ACNGT 2 cut(s) 454, 565
TaiI ACGT 1 cut(s) 505
TasI AATT 7 cut(s) 205, 234, 397, 491, 537, 623, 704
TfiI GAWTC 1 cut(s) 466
Tru1I TTAA 3 cut(s) 260, 405, 627
Tru9I TTAA 3 cut(s) 260, 405, 627
TscAI CASTG 4 cut(s) 280, 285, 588, 660
TseFI GTSAC 1 cut(s) 697
TseI GCWGC 1 cut(s) 212
Tsp45I GTSAC 1 cut(s) 697
TspDTI ATGAA 3 cut(s) 14, 168, 816
TspRI CASTG 4 cut(s) 280, 285, 588, 660
Van91I CCANNNNNTGG 1 cut(s) 506
XapI RAATTY 2 cut(s) 397, 537
XmiI GTMKAC 1 cut(s) 447
XmnI GAANNNNTTC 1 cut(s) 541
XspI CTAG 2 cut(s) 38, 69
Zsp2I ATGCAT 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.