Tobamovirus multiplication protein 1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G21790 |
| fragaria_vesca | FvH4_3g02360 FvH4_3g02360 |
| malus_domestica | MD05G1343500.v1.1 MD10G1318600.v1.1 |
| prunus_persica | Prupe.4G023400_v2.0.a1 |
| pyrus_communis | pycom05g31290 |
| rosa_chinensis | RchiOBHm_Chr5g0003581 |
| rosa_laevigata | RLG00000031154 |
| rosa_multiflora | Rmu_sc0004279.1_g000004 Rmu_sc0015897.1_g000002 Rmu_sc0022447.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00072380 |
| rosa_rugosa | Rorug04G0404700 Rorug04G0404800 |
| rosa_samantha | Rh5AG031600 Rh5BG030500 Rh5CG034200 |
| rosa_wichuraiana | Rw5G002940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 557 |
| Acc36I | ACCTGC | 1 cut(s) | 419 |
| AclWI | GGATC | 4 cut(s) | 63, 394, 489, 517 |
| AfaI | GTAC | 3 cut(s) | 86, 188, 195 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 106 |
| AgsI | TTSAA | 3 cut(s) | 28, 350, 496 |
| AjnI | CCWGG | 3 cut(s) | 30, 61, 123 |
| AluBI | AGCT | 3 cut(s) | 151, 272, 584 |
| AluI | AGCT | 3 cut(s) | 151, 272, 584 |
| Alw26I | GTCTC | 1 cut(s) | 328 |
| AlwI | GGATC | 4 cut(s) | 63, 394, 489, 517 |
| ApeKI | GCWGC | 3 cut(s) | 18, 269, 287 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 500 |
| AspLEI | GCGC | 1 cut(s) | 558 |
| AsuHPI | GGTGA | 1 cut(s) | 113 |
| BbvCI | CCTCAGC | 1 cut(s) | 532 |
| BbvI | GCAGC | 3 cut(s) | 5, 274, 281 |
| BccI | CCATC | 1 cut(s) | 8 |
| BciT130I | CCWGG | 3 cut(s) | 32, 63, 125 |
| BcoDI | GTCTC | 1 cut(s) | 328 |
| BfaI | CTAG | 1 cut(s) | 293 |
| BfuAI | ACCTGC | 1 cut(s) | 419 |
| BisI | GCNGC | 3 cut(s) | 19, 270, 288 |
| BlsI | GCNGC | 3 cut(s) | 20, 271, 289 |
| Bme1390I | CCNGG | 3 cut(s) | 32, 63, 125 |
| BmrFI | CCNGG | 3 cut(s) | 32, 63, 125 |
| BmsI | GCATC | 3 cut(s) | 416, 451, 473 |
| Bpu10I | CCTNAGC | 2 cut(s) | 152, 532 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseBI | CCWGG | 3 cut(s) | 32, 63, 125 |
| BseGI | GGATG | 4 cut(s) | 19, 442, 484, 592 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseMII | CTCAG | 4 cut(s) | 166, 323, 546, 599 |
| BseXI | GCAGC | 3 cut(s) | 5, 274, 281 |
| BsgI | GTGCAG | 1 cut(s) | 273 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BsmAI | GTCTC | 1 cut(s) | 328 |
| BsmBI | CGTCTC | 1 cut(s) | 328 |
| BsmI | GAATGC | 1 cut(s) | 502 |
| Bsp143I | GATC | 4 cut(s) | 55, 386, 481, 522 |
| BspCNI | CTCAG | 4 cut(s) | 165, 324, 545, 598 |
| BspHI | TCATGA | 1 cut(s) | 376 |
| BspMI | ACCTGC | 1 cut(s) | 419 |
| BspPI | GGATC | 4 cut(s) | 63, 394, 489, 517 |
| BssMI | GATC | 4 cut(s) | 55, 386, 481, 522 |
| Bst2UI | CCWGG | 3 cut(s) | 32, 63, 125 |
| Bst6I | CTCTTC | 1 cut(s) | 551 |
| BstDEI | CTNAG | 5 cut(s) | 152, 332, 532, 538, 585 |
| BstF5I | GGATG | 4 cut(s) | 19, 442, 484, 592 |
| BstHHI | GCGC | 1 cut(s) | 558 |
| BstKTI | GATC | 4 cut(s) | 58, 389, 484, 525 |
| BstMAI | GTCTC | 1 cut(s) | 328 |
| BstMBI | GATC | 4 cut(s) | 55, 386, 481, 522 |
| BstNI | CCWGG | 3 cut(s) | 32, 63, 125 |
| BstNSI | RCATGY | 2 cut(s) | 25, 514 |
| BstSCI | CCNGG | 3 cut(s) | 30, 61, 123 |
| BstV1I | GCAGC | 3 cut(s) | 5, 274, 281 |
| BstX2I | RGATCY | 3 cut(s) | 55, 386, 522 |
| BstYI | RGATCY | 3 cut(s) | 55, 386, 522 |
| BtsCI | GGATG | 4 cut(s) | 19, 442, 484, 592 |
| BveI | ACCTGC | 1 cut(s) | 419 |
| CciI | TCATGA | 1 cut(s) | 376 |
| CfoI | GCGC | 1 cut(s) | 558 |
| CsiI | ACCWGGT | 1 cut(s) | 30 |
| Csp6I | GTAC | 3 cut(s) | 85, 187, 194 |
| CviAII | CATG | 4 cut(s) | 22, 328, 377, 511 |
| CviJI | RGCY | 7 cut(s) | 18, 151, 272, 287, 398, 536, 584 |
| CviKI_1 | RGCY | 7 cut(s) | 18, 151, 272, 287, 398, 536, 584 |
| CviQI | GTAC | 3 cut(s) | 85, 187, 194 |
| DdeI | CTNAG | 5 cut(s) | 152, 332, 532, 538, 585 |
| DpnI | GATC | 4 cut(s) | 57, 388, 483, 524 |
| DpnII | GATC | 4 cut(s) | 55, 386, 481, 522 |
| Eam1104I | CTCTTC | 1 cut(s) | 551 |
| EarI | CTCTTC | 1 cut(s) | 551 |
| EcoRII | CCWGG | 3 cut(s) | 30, 61, 123 |
| EcoT22I | ATGCAT | 1 cut(s) | 466 |
| Esp3I | CGTCTC | 1 cut(s) | 328 |
| FaeI | CATG | 4 cut(s) | 25, 331, 380, 514 |
| FatI | CATG | 4 cut(s) | 21, 327, 376, 510 |
| FauNDI | CATATG | 1 cut(s) | 401 |
| Fnu4HI | GCNGC | 3 cut(s) | 19, 270, 288 |
| FokI | GGATG | 4 cut(s) | 26, 449, 471, 579 |
| Fsp4HI | GCNGC | 3 cut(s) | 19, 270, 288 |
| FspBI | CTAG | 1 cut(s) | 293 |
| FspI | TGCGCA | 1 cut(s) | 557 |
| GlaI | GCGC | 1 cut(s) | 557 |
| GluI | GCNGC | 3 cut(s) | 19, 270, 288 |
| HhaI | GCGC | 1 cut(s) | 558 |
| Hin1II | CATG | 4 cut(s) | 25, 331, 380, 514 |
| Hin6I | GCGC | 1 cut(s) | 556 |
| HinP1I | GCGC | 1 cut(s) | 556 |
| HinfI | GANTC | 1 cut(s) | 350 |
| HphI | GGTGA | 1 cut(s) | 113 |
| Hpy166II | GTNNAC | 2 cut(s) | 87, 137 |
| Hpy188III | TCNNGA | 3 cut(s) | 154, 208, 377 |
| Hpy8I | GTNNAC | 2 cut(s) | 87, 137 |
| HpyAV | CCTTC | 2 cut(s) | 309, 357 |
| HpyCH4IV | ACGT | 3 cut(s) | 83, 337, 601 |
| HpyCH4V | TGCA | 4 cut(s) | 21, 269, 290, 464 |
| HpyF3I | CTNAG | 5 cut(s) | 152, 332, 532, 538, 585 |
| HpySE526I | ACGT | 3 cut(s) | 83, 337, 601 |
| Hsp92II | CATG | 4 cut(s) | 25, 331, 380, 514 |
| HspAI | GCGC | 1 cut(s) | 556 |
| Kzo9I | GATC | 4 cut(s) | 55, 386, 481, 522 |
| Lsp1109I | GCAGC | 3 cut(s) | 5, 274, 281 |
| LweI | GCATC | 3 cut(s) | 416, 451, 473 |
| MabI | ACCWGGT | 1 cut(s) | 30 |
| MaeI | CTAG | 1 cut(s) | 293 |
| MaeII | ACGT | 3 cut(s) | 83, 337, 601 |
| MaeIII | GTNAC | 1 cut(s) | 391 |
| MalI | GATC | 4 cut(s) | 57, 388, 483, 524 |
| MboI | GATC | 4 cut(s) | 55, 386, 481, 522 |
| MboII | GAAGA | 4 cut(s) | 50, 67, 379, 538 |
| MfeI | CAATTG | 1 cut(s) | 345 |
| MflI | RGATCY | 3 cut(s) | 55, 386, 522 |
| MluCI | AATT | 3 cut(s) | 303, 345, 560 |
| MmeI | TCCRAC | 1 cut(s) | 364 |
| MnlI | CCTC | 6 cut(s) | 215, 227, 305, 373, 541, 554 |
| Mph1103I | ATGCAT | 1 cut(s) | 466 |
| MroXI | GAANNNNTTC | 1 cut(s) | 500 |
| MseI | TTAA | 1 cut(s) | 302 |
| MspA1I | CMGCKG | 1 cut(s) | 272 |
| MspR9I | CCNGG | 3 cut(s) | 32, 63, 125 |
| MunI | CAATTG | 1 cut(s) | 345 |
| Mva1269I | GAATGC | 1 cut(s) | 502 |
| MvaI | CCWGG | 3 cut(s) | 32, 63, 125 |
| NdeI | CATATG | 1 cut(s) | 401 |
| NdeII | GATC | 4 cut(s) | 55, 386, 481, 522 |
| NlaIII | CATG | 4 cut(s) | 25, 331, 380, 514 |
| NsbI | TGCGCA | 1 cut(s) | 557 |
| NsiI | ATGCAT | 1 cut(s) | 466 |
| NspI | RCATGY | 2 cut(s) | 25, 514 |
| PagI | TCATGA | 1 cut(s) | 376 |
| PctI | GAATGC | 1 cut(s) | 502 |
| PdmI | GAANNNNTTC | 1 cut(s) | 500 |
| PfeI | GAWTC | 1 cut(s) | 350 |
| PfoI | TCCNGGA | 1 cut(s) | 61 |
| PkrI | GCNGC | 3 cut(s) | 20, 271, 289 |
| Psp6I | CCWGG | 3 cut(s) | 30, 61, 123 |
| PspGI | CCWGG | 3 cut(s) | 30, 61, 123 |
| PsuI | RGATCY | 3 cut(s) | 55, 386, 522 |
| PvuII | CAGCTG | 1 cut(s) | 272 |
| RsaI | GTAC | 3 cut(s) | 86, 188, 195 |
| RsaNI | GTAC | 3 cut(s) | 85, 187, 194 |
| SaqAI | TTAA | 1 cut(s) | 302 |
| SatI | GCNGC | 3 cut(s) | 19, 270, 288 |
| Sau3AI | GATC | 4 cut(s) | 55, 386, 481, 522 |
| ScrFI | CCNGG | 3 cut(s) | 32, 63, 125 |
| SexAI | ACCWGGT | 1 cut(s) | 30 |
| SfaNI | GCATC | 3 cut(s) | 416, 451, 473 |
| Sse9I | AATT | 3 cut(s) | 303, 345, 560 |
| SspMI | CTAG | 1 cut(s) | 293 |
| StyD4I | CCNGG | 3 cut(s) | 30, 61, 123 |
| TaiI | ACGT | 3 cut(s) | 86, 340, 604 |
| TasI | AATT | 3 cut(s) | 303, 345, 560 |
| TatI | WGTACW | 1 cut(s) | 186 |
| TfiI | GAWTC | 1 cut(s) | 350 |
| Tru1I | TTAA | 1 cut(s) | 302 |
| Tru9I | TTAA | 1 cut(s) | 302 |
| TseI | GCWGC | 3 cut(s) | 18, 269, 287 |
| TspDTI | ATGAA | 4 cut(s) | 238, 316, 365, 538 |
| XceI | RCATGY | 2 cut(s) | 25, 514 |
| XmnI | GAANNNNTTC | 1 cut(s) | 500 |
| XspI | CTAG | 1 cut(s) | 293 |
| Zsp2I | ATGCAT | 1 cut(s) | 466 |