Tobamovirus multiplication protein 1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G21790 |
| fragaria_vesca | FvH4_3g02360 FvH4_3g02360 |
| malus_domestica | MD05G1343500.v1.1 MD10G1318600.v1.1 |
| prunus_persica | Prupe.4G023400_v2.0.a1 |
| pyrus_communis | pycom05g31290 |
| rosa_chinensis | RchiOBHm_Chr5g0003581 |
| rosa_laevigata | RLG00000031154 |
| rosa_multiflora | Rmu_sc0004279.1_g000004 Rmu_sc0015897.1_g000002 Rmu_sc0022447.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00072380 |
| rosa_rugosa | Rorug04G0404700 Rorug04G0404800 |
| rosa_samantha | Rh5AG031600 Rh5BG030500 Rh5CG034200 |
| rosa_wichuraiana | Rw5G002940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 117 |
| AccII | CGCG | 1 cut(s) | 387 |
| AciI | CCGC | 2 cut(s) | 29, 385 |
| AclWI | GGATC | 1 cut(s) | 128 |
| AcuI | CTGAAG | 1 cut(s) | 284 |
| AcyI | GRCGYC | 1 cut(s) | 375 |
| AdeI | CACNNNGTG | 1 cut(s) | 124 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 534 |
| AgsI | TTSAA | 3 cut(s) | 94, 146, 199 |
| AjnI | CCWGG | 1 cut(s) | 582 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 65, 97 |
| AluBI | AGCT | 3 cut(s) | 52, 79, 313 |
| AluI | AGCT | 3 cut(s) | 52, 79, 313 |
| Alw26I | GTCTC | 1 cut(s) | 343 |
| AlwI | GGATC | 1 cut(s) | 128 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 583 |
| AoxI | GGCC | 1 cut(s) | 413 |
| ApeKI | GCWGC | 2 cut(s) | 26, 332 |
| AspS9I | GGNCC | 1 cut(s) | 414 |
| AsuC2I | CCSGG | 1 cut(s) | 535 |
| BanI | GGYRCC | 1 cut(s) | 117 |
| BbvI | GCAGC | 2 cut(s) | 13, 319 |
| BccI | CCATC | 1 cut(s) | 389 |
| BceAI | ACGGC | 1 cut(s) | 320 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 461, 495 |
| BciT130I | CCWGG | 1 cut(s) | 584 |
| BcnI | CCSGG | 1 cut(s) | 535 |
| BcoDI | GTCTC | 1 cut(s) | 343 |
| BfmI | CTRYAG | 1 cut(s) | 544 |
| BisI | GCNGC | 2 cut(s) | 27, 333 |
| BlsI | GCNGC | 2 cut(s) | 28, 334 |
| Bme1390I | CCNGG | 2 cut(s) | 535, 584 |
| BmgT120I | GGNCC | 1 cut(s) | 414 |
| BmiI | GGNNCC | 1 cut(s) | 119 |
| BmrFI | CCNGG | 2 cut(s) | 535, 584 |
| BmsI | GCATC | 1 cut(s) | 469 |
| BpmI | CTGGAG | 1 cut(s) | 605 |
| BpuMI | CCSGG | 1 cut(s) | 535 |
| BsaBI | GATNNNNATC | 1 cut(s) | 291 |
| BsaHI | GRCGYC | 1 cut(s) | 375 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 534 |
| Bse3DI | GCAATG | 1 cut(s) | 565 |
| Bse8I | GATNNNNATC | 1 cut(s) | 291 |
| BseBI | CCWGG | 1 cut(s) | 584 |
| BseGI | GGATG | 1 cut(s) | 292 |
| BseJI | GATNNNNATC | 1 cut(s) | 291 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 534 |
| BseMI | GCAATG | 1 cut(s) | 565 |
| BseRI | GAGGAG | 1 cut(s) | 83 |
| BseXI | GCAGC | 2 cut(s) | 13, 319 |
| BseYI | CCCAGC | 1 cut(s) | 48 |
| Bsh1236I | CGCG | 1 cut(s) | 387 |
| BshFI | GGCC | 1 cut(s) | 415 |
| BshNI | GGYRCC | 1 cut(s) | 117 |
| BsiSI | CCGG | 2 cut(s) | 281, 535 |
| BslFI | GGGAC | 2 cut(s) | 386, 588 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 534 |
| BsmAI | GTCTC | 1 cut(s) | 343 |
| BsmBI | CGTCTC | 1 cut(s) | 343 |
| BsmFI | GGGAC | 2 cut(s) | 386, 588 |
| BsnI | GGCC | 1 cut(s) | 415 |
| Bsp143I | GATC | 3 cut(s) | 133, 437, 588 |
| BspACI | CCGC | 2 cut(s) | 29, 385 |
| BspANI | GGCC | 1 cut(s) | 415 |
| BspFNI | CGCG | 1 cut(s) | 387 |
| BspLI | GGNNCC | 1 cut(s) | 119 |
| BspMAI | CTGCAG | 1 cut(s) | 548 |
| BspPI | GGATC | 1 cut(s) | 128 |
| BspT107I | GGYRCC | 1 cut(s) | 117 |
| BsrDI | GCAATG | 1 cut(s) | 565 |
| BssMI | GATC | 3 cut(s) | 133, 437, 588 |
| BssNI | GRCGYC | 1 cut(s) | 375 |
| Bst2UI | CCWGG | 1 cut(s) | 584 |
| Bst4CI | ACNGT | 2 cut(s) | 122, 227 |
| Bst6I | CTCTTC | 1 cut(s) | 260 |
| BstACI | GRCGYC | 1 cut(s) | 375 |
| BstC8I | GCNNGC | 1 cut(s) | 433 |
| BstF5I | GGATG | 1 cut(s) | 292 |
| BstFNI | CGCG | 1 cut(s) | 387 |
| BstKTI | GATC | 3 cut(s) | 136, 440, 591 |
| BstMAI | GTCTC | 1 cut(s) | 343 |
| BstMBI | GATC | 3 cut(s) | 133, 437, 588 |
| BstNI | CCWGG | 1 cut(s) | 584 |
| BstSCI | CCNGG | 2 cut(s) | 533, 582 |
| BstSFI | CTRYAG | 1 cut(s) | 544 |
| BstUI | CGCG | 1 cut(s) | 387 |
| BstV1I | GCAGC | 2 cut(s) | 13, 319 |
| BsuRI | GGCC | 1 cut(s) | 415 |
| BtsCI | GGATG | 1 cut(s) | 292 |
| BtsIMutI | CAGTG | 1 cut(s) | 584 |
| Cac8I | GCNNGC | 1 cut(s) | 433 |
| CaiI | CAGNNNCTG | 1 cut(s) | 583 |
| Cfr13I | GGNCC | 1 cut(s) | 414 |
| CseI | GACGC | 3 cut(s) | 359, 376, 383 |
| CviAII | CATG | 2 cut(s) | 401, 560 |
| CviJI | RGCY | 8 cut(s) | 52, 60, 79, 111, 164, 313, 332, 415 |
| CviKI_1 | RGCY | 8 cut(s) | 52, 60, 79, 111, 164, 313, 332, 415 |
| DpnI | GATC | 3 cut(s) | 135, 439, 590 |
| DpnII | GATC | 3 cut(s) | 133, 437, 588 |
| DraIII | CACNNNGTG | 1 cut(s) | 124 |
| Eam1104I | CTCTTC | 1 cut(s) | 260 |
| EarI | CTCTTC | 1 cut(s) | 260 |
| Eco57I | CTGAAG | 1 cut(s) | 284 |
| EcoRII | CCWGG | 1 cut(s) | 582 |
| Esp3I | CGTCTC | 1 cut(s) | 343 |
| FaeI | CATG | 2 cut(s) | 404, 563 |
| FaiI | YATR | 7 cut(s) | 56, 240, 272, 402, 409, 411, 561 |
| FaqI | GGGAC | 2 cut(s) | 386, 588 |
| FatI | CATG | 2 cut(s) | 400, 559 |
| Fnu4HI | GCNGC | 2 cut(s) | 27, 333 |
| FokI | GGATG | 1 cut(s) | 279 |
| Fsp4HI | GCNGC | 2 cut(s) | 27, 333 |
| GluI | GCNGC | 2 cut(s) | 27, 333 |
| GsaI | CCCAGC | 1 cut(s) | 52 |
| GsuI | CTGGAG | 1 cut(s) | 605 |
| HaeIII | GGCC | 1 cut(s) | 415 |
| HapII | CCGG | 2 cut(s) | 281, 535 |
| HgaI | GACGC | 3 cut(s) | 359, 376, 383 |
| Hin1I | GRCGYC | 1 cut(s) | 375 |
| Hin1II | CATG | 2 cut(s) | 404, 563 |
| HincII | GTYRAC | 1 cut(s) | 307 |
| HindII | GTYRAC | 1 cut(s) | 307 |
| HinfI | GANTC | 1 cut(s) | 424 |
| HpaII | CCGG | 2 cut(s) | 281, 535 |
| Hpy166II | GTNNAC | 2 cut(s) | 307, 349 |
| Hpy188I | TCNGA | 4 cut(s) | 89, 214, 264, 392 |
| Hpy8I | GTNNAC | 2 cut(s) | 307, 349 |
| Hpy99I | CGWCG | 1 cut(s) | 392 |
| HpyCH4III | ACNGT | 2 cut(s) | 122, 227 |
| HpyCH4V | TGCA | 3 cut(s) | 34, 546, 570 |
| Hsp92I | GRCGYC | 1 cut(s) | 375 |
| Hsp92II | CATG | 2 cut(s) | 404, 563 |
| Kzo9I | GATC | 3 cut(s) | 133, 437, 588 |
| LmnI | GCTCC | 1 cut(s) | 457 |
| Lsp1109I | GCAGC | 2 cut(s) | 13, 319 |
| LweI | GCATC | 1 cut(s) | 469 |
| MaeIII | GTNAC | 3 cut(s) | 124, 227, 463 |
| MalI | GATC | 3 cut(s) | 135, 439, 590 |
| MboI | GATC | 3 cut(s) | 133, 437, 588 |
| MboII | GAAGA | 2 cut(s) | 277, 296 |
| MfeI | CAATTG | 1 cut(s) | 138 |
| MluCI | AATT | 3 cut(s) | 138, 206, 444 |
| MmeI | TCCRAC | 2 cut(s) | 237, 370 |
| MnlI | CCTC | 7 cut(s) | 61, 64, 322, 493, 499, 502, 617 |
| MseI | TTAA | 1 cut(s) | 640 |
| MslI | CAYNNNNRTG | 1 cut(s) | 558 |
| MspI | CCGG | 2 cut(s) | 281, 535 |
| MspR9I | CCNGG | 2 cut(s) | 535, 584 |
| MunI | CAATTG | 1 cut(s) | 138 |
| MvaI | CCWGG | 1 cut(s) | 584 |
| MvnI | CGCG | 1 cut(s) | 387 |
| NciI | CCSGG | 1 cut(s) | 535 |
| NdeII | GATC | 3 cut(s) | 133, 437, 588 |
| NlaIII | CATG | 2 cut(s) | 404, 563 |
| NlaIV | GGNNCC | 1 cut(s) | 119 |
| NmuCI | GTSAC | 2 cut(s) | 124, 463 |
| PfeI | GAWTC | 1 cut(s) | 424 |
| PkrI | GCNGC | 2 cut(s) | 28, 334 |
| Psp6I | CCWGG | 1 cut(s) | 582 |
| PspFI | CCCAGC | 1 cut(s) | 48 |
| PspGI | CCWGG | 1 cut(s) | 582 |
| PspN4I | GGNNCC | 1 cut(s) | 119 |
| PspPI | GGNCC | 1 cut(s) | 414 |
| PstI | CTGCAG | 1 cut(s) | 548 |
| PstNI | CAGNNNCTG | 1 cut(s) | 583 |
| RseI | CAYNNNNRTG | 1 cut(s) | 558 |
| SaqAI | TTAA | 1 cut(s) | 640 |
| SatI | GCNGC | 2 cut(s) | 27, 333 |
| Sau3AI | GATC | 3 cut(s) | 133, 437, 588 |
| Sau96I | GGNCC | 1 cut(s) | 414 |
| ScrFI | CCNGG | 2 cut(s) | 535, 584 |
| SetI | ASST | 5 cut(s) | 9, 54, 81, 315, 602 |
| SfaNI | GCATC | 1 cut(s) | 469 |
| SfcI | CTRYAG | 1 cut(s) | 544 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 558 |
| Sse9I | AATT | 3 cut(s) | 138, 206, 444 |
| SsiI | CCGC | 2 cut(s) | 29, 385 |
| StyD4I | CCNGG | 2 cut(s) | 533, 582 |
| TaaI | ACNGT | 2 cut(s) | 122, 227 |
| TaqI | TCGA | 1 cut(s) | 471 |
| TasI | AATT | 3 cut(s) | 138, 206, 444 |
| TfiI | GAWTC | 1 cut(s) | 424 |
| Tru1I | TTAA | 1 cut(s) | 640 |
| Tru9I | TTAA | 1 cut(s) | 640 |
| TscAI | CASTG | 1 cut(s) | 584 |
| TseFI | GTSAC | 2 cut(s) | 124, 463 |
| TseI | GCWGC | 2 cut(s) | 26, 332 |
| Tsp45I | GTSAC | 2 cut(s) | 124, 463 |
| TspDTI | ATGAA | 5 cut(s) | 73, 255, 303, 417, 548 |
| TspRI | CASTG | 1 cut(s) | 584 |