Subtilisin-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G20150 AT1G20160 AT1G20160 AT1G20160 |
| fragaria_vesca | FvH4_2g38090 |
| malus_domestica | MD08G1009400.v1.1 |
| prunus_persica | Prupe.1G361300_v2.0.a1 |
| pyrus_communis | pycom08g00790 pycom15g00680 pycom15g00690 |
| rosa_chinensis | RchiOBHm_Chr3g0451701 RchiOBHm_Chr6g0303461 |
| rosa_laevigata | RLG00000011082 |
| rosa_multiflora | Rmu_ssc0000114.1_g000050 |
| rosa_roxburghii | Rroxscaffold_7G00164720 Rroxscaffold_7G00164730 |
| rosa_rugosa | Rorug06G0321400 Rorug06G0321500 |
| rosa_samantha | Rh6AG436000 Rh6BG467600 Rh6CG447900 Rh6DG434600 |
| rosa_wichuraiana | Rw6G037730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1069 |
| AccBSI | CCGCTC | 1 cut(s) | 368 |
| AccII | CGCG | 3 cut(s) | 41, 1122, 1523 |
| AccIII | TCCGGA | 1 cut(s) | 1994 |
| AciI | CCGC | 9 cut(s) | 41, 69, 117, 366, 818, 1120, 1446, 1521, 2000 |
| AclWI | GGATC | 4 cut(s) | 238, 580, 905, 946 |
| AcoI | YGGCCR | 1 cut(s) | 611 |
| AcsI | RAATTY | 3 cut(s) | 1240, 1778, 2186 |
| AcuI | CTGAAG | 1 cut(s) | 1647 |
| AfaI | GTAC | 4 cut(s) | 224, 799, 834, 1271 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1069, 1101, 1179, 1426 |
| AflIII | ACRYGT | 2 cut(s) | 1816, 2391 |
| AhlI | ACTAGT | 1 cut(s) | 167 |
| AjnI | CCWGG | 6 cut(s) | 409, 464, 886, 1652, 1705, 2008 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1535, 1567, 2379, 2411 |
| Alw21I | GWGCWC | 2 cut(s) | 336, 1791 |
| Alw26I | GTCTC | 4 cut(s) | 304, 1256, 1598, 2406 |
| Alw44I | GTGCAC | 1 cut(s) | 332 |
| AlwI | GGATC | 4 cut(s) | 238, 580, 905, 946 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1310, 1514, 1607, 1706 |
| Aor13HI | TCCGGA | 1 cut(s) | 1994 |
| AoxI | GGCC | 4 cut(s) | 611, 1428, 1657, 1770 |
| ApaI | GGGCCC | 1 cut(s) | 1661 |
| ApaLI | GTGCAC | 1 cut(s) | 332 |
| ApoI | RAATTY | 3 cut(s) | 1240, 1778, 2186 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1169, 1201 |
| AspLEI | GCGC | 3 cut(s) | 41, 1144, 1630 |
| AspS9I | GGNCC | 7 cut(s) | 647, 686, 1112, 1657, 1658, 1771, 1997 |
| AsuC2I | CCSGG | 1 cut(s) | 837 |
| AsuHPI | GGTGA | 3 cut(s) | 281, 765, 2258 |
| AsuNHI | GCTAGC | 1 cut(s) | 179 |
| AvaII | GGWCC | 4 cut(s) | 647, 686, 1112, 1997 |
| BaeGI | GKGCMC | 2 cut(s) | 336, 1661 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 789, 822 |
| BanII | GRGCYC | 1 cut(s) | 1661 |
| BauI | CACGAG | 1 cut(s) | 33 |
| BbsI | GAAGAC | 1 cut(s) | 2394 |
| Bbv12I | GWGCWC | 2 cut(s) | 336, 1791 |
| BbvCI | CCTCAGC | 1 cut(s) | 1311 |
| BceAI | ACGGC | 1 cut(s) | 1415 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1112, 1146, 1955, 1989 |
| BciT130I | CCWGG | 6 cut(s) | 411, 466, 888, 1654, 1707, 2010 |
| BciVI | GTATCC | 2 cut(s) | 2002, 2266 |
| BclI | TGATCA | 5 cut(s) | 187, 433, 1221, 1362, 1474 |
| BcnI | CCSGG | 1 cut(s) | 837 |
| BcoDI | GTCTC | 4 cut(s) | 304, 1256, 1598, 2406 |
| BcuI | ACTAGT | 1 cut(s) | 167 |
| BfaI | CTAG | 5 cut(s) | 168, 180, 1248, 2097, 2280 |
| BfmI | CTRYAG | 3 cut(s) | 234, 261, 1935 |
| BfoI | RGCGCY | 1 cut(s) | 1631 |
| BfuI | GTATCC | 2 cut(s) | 2002, 2266 |
| BlpI | GCTNAGC | 2 cut(s) | 856, 1031 |
| Bme1390I | CCNGG | 7 cut(s) | 411, 466, 837, 888, 1654, 1707, 2010 |
| Bme18I | GGWCC | 4 cut(s) | 647, 686, 1112, 1997 |
| BmgT120I | GGNCC | 7 cut(s) | 647, 686, 1112, 1657, 1658, 1771, 1997 |
| BmiI | GGNNCC | 6 cut(s) | 648, 883, 1317, 1658, 1659, 1773 |
| BmrFI | CCNGG | 7 cut(s) | 411, 466, 837, 888, 1654, 1707, 2010 |
| BmrI | ACTGGG | 1 cut(s) | 1574 |
| BmsI | GCATC | 6 cut(s) | 138, 528, 566, 851, 955, 1528 |
| BmtI | GCTAGC | 1 cut(s) | 183 |
| BmuI | ACTGGG | 1 cut(s) | 1574 |
| BpiI | GAAGAC | 1 cut(s) | 2394 |
| BpmI | CTGGAG | 3 cut(s) | 432, 730, 1238 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1311 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 856, 1031 |
| BpuEI | CTTGAG | 3 cut(s) | 292, 461, 1670 |
| BpuMI | CCSGG | 1 cut(s) | 837 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1379 |
| BsaI | GGTCTC | 1 cut(s) | 2406 |
| BsaWI | WCCGGW | 2 cut(s) | 1179, 1994 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 377, 407, 432, 462, 506, 536 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1069, 1101, 1179, 1426 |
| Bse1I | ACTGG | 1 cut(s) | 1580 |
| Bse3DI | GCAATG | 3 cut(s) | 1044, 1744, 2422 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1379 |
| BseAI | TCCGGA | 1 cut(s) | 1994 |
| BseBI | CCWGG | 6 cut(s) | 411, 466, 888, 1654, 1707, 2010 |
| BseGI | GGATG | 7 cut(s) | 701, 842, 1477, 1543, 1649, 2005, 2075 |
| BseJI | GATNNNNATC | 1 cut(s) | 1379 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1069, 1101, 1179, 1426 |
| BseMI | GCAATG | 3 cut(s) | 1044, 1744, 2422 |
| BseMII | CTCAG | 5 cut(s) | 480, 1022, 1302, 1806, 2356 |
| BseNI | ACTGG | 1 cut(s) | 1580 |
| BseRI | GAGGAG | 2 cut(s) | 395, 398 |
| BseSI | GKGCMC | 2 cut(s) | 336, 1661 |
| BseYI | CCCAGC | 1 cut(s) | 863 |
| BsgI | GTGCAG | 1 cut(s) | 1995 |
| Bsh1236I | CGCG | 3 cut(s) | 41, 1122, 1523 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2268 |
| BshFI | GGCC | 4 cut(s) | 613, 1430, 1659, 1772 |
| BsiEI | CGRYCG | 1 cut(s) | 2268 |
| BsiHKAI | GWGCWC | 2 cut(s) | 336, 1791 |
| BsiSI | CCGG | 5 cut(s) | 614, 836, 1025, 1180, 1995 |
| BslFI | GGGAC | 3 cut(s) | 880, 985, 1810 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1069, 1101, 1179, 1426 |
| BsmAI | GTCTC | 4 cut(s) | 304, 1256, 1598, 2406 |
| BsmBI | CGTCTC | 1 cut(s) | 304 |
| BsmFI | GGGAC | 3 cut(s) | 880, 985, 1810 |
| BsmI | GAATGC | 1 cut(s) | 956 |
| BsnI | GGCC | 4 cut(s) | 613, 1430, 1659, 1772 |
| Bso31I | GGTCTC | 1 cut(s) | 2406 |
| Bsp120I | GGGCCC | 1 cut(s) | 1657 |
| Bsp1286I | GDGCHC | 3 cut(s) | 336, 1661, 1791 |
| Bsp13I | TCCGGA | 1 cut(s) | 1994 |
| Bsp1407I | TGTACA | 1 cut(s) | 222 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 856, 1031 |
| BspACI | CCGC | 9 cut(s) | 41, 69, 117, 366, 818, 1120, 1446, 1521, 2000 |
| BspANI | GGCC | 4 cut(s) | 613, 1430, 1659, 1772 |
| BspCNI | CTCAG | 5 cut(s) | 481, 1023, 1303, 1805, 2355 |
| BspEI | TCCGGA | 1 cut(s) | 1994 |
| BspFNI | CGCG | 3 cut(s) | 41, 1122, 1523 |
| BspHI | TCATGA | 1 cut(s) | 1890 |
| BspLI | GGNNCC | 6 cut(s) | 648, 883, 1317, 1658, 1659, 1773 |
| BspMAI | CTGCAG | 1 cut(s) | 238 |
| BspOI | GCTAGC | 1 cut(s) | 183 |
| BspPI | GGATC | 4 cut(s) | 238, 580, 905, 946 |
| BspTNI | GGTCTC | 1 cut(s) | 2406 |
| BsrBI | CCGCTC | 1 cut(s) | 368 |
| BsrDI | GCAATG | 3 cut(s) | 1044, 1744, 2422 |
| BsrGI | TGTACA | 1 cut(s) | 222 |
| BsrI | ACTGG | 1 cut(s) | 1580 |
| BssSI | CACGAG | 1 cut(s) | 33 |
| BssT1I | CCWWGG | 6 cut(s) | 776, 873, 1003, 1145, 2136, 2382 |
| Bst2BI | CACGAG | 1 cut(s) | 33 |
| Bst2UI | CCWGG | 6 cut(s) | 411, 466, 888, 1654, 1707, 2010 |
| Bst4CI | ACNGT | 9 cut(s) | 64, 81, 393, 1129, 1159, 1609, 1636, 1840, 1990 |
| Bst6I | CTCTTC | 3 cut(s) | 164, 1430, 2368 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1292, 1514 |
| BstAUI | TGTACA | 1 cut(s) | 222 |
| BstC8I | GCNNGC | 5 cut(s) | 127, 181, 676, 811, 1810 |
| BstDEI | CTNAG | 7 cut(s) | 489, 856, 1031, 1311, 1792, 2288, 2342 |
| BstDSI | CCRYGG | 1 cut(s) | 1632 |
| BstF5I | GGATG | 7 cut(s) | 701, 842, 1477, 1543, 1649, 2005, 2075 |
| BstFNI | CGCG | 3 cut(s) | 41, 1122, 1523 |
| BstH2I | RGCGCY | 1 cut(s) | 1631 |
| BstHHI | GCGC | 3 cut(s) | 41, 1144, 1630 |
| BstMAI | GTCTC | 4 cut(s) | 304, 1256, 1598, 2406 |
| BstMCI | CGRYCG | 1 cut(s) | 2268 |
| BstNI | CCWGG | 6 cut(s) | 411, 466, 888, 1654, 1707, 2010 |
| BstNSI | RCATGY | 5 cut(s) | 678, 806, 1812, 1820, 2395 |
| BstSCI | CCNGG | 7 cut(s) | 409, 464, 835, 886, 1652, 1705, 2008 |
| BstSFI | CTRYAG | 3 cut(s) | 234, 261, 1935 |
| BstSLI | GKGCMC | 2 cut(s) | 336, 1661 |
| BstUI | CGCG | 3 cut(s) | 41, 1122, 1523 |
| BstV2I | GAAGAC | 1 cut(s) | 2394 |
| BstX2I | RGATCY | 2 cut(s) | 230, 572 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 663 |
| BstYI | RGATCY | 2 cut(s) | 230, 572 |
| BsuI | GTATCC | 2 cut(s) | 2002, 2266 |
| BsuRI | GGCC | 4 cut(s) | 613, 1430, 1659, 1772 |
| BtgI | CCRYGG | 1 cut(s) | 1632 |
| BtgZI | GCGATG | 1 cut(s) | 2077 |
| BtsCI | GGATG | 7 cut(s) | 701, 842, 1477, 1543, 1649, 2005, 2075 |
| BtsI | GCAGTG | 2 cut(s) | 1042, 1074 |
| BtsIMutI | CAGTG | 6 cut(s) | 86, 183, 979, 1042, 1074, 1274 |
| Cac8I | GCNNGC | 5 cut(s) | 127, 181, 676, 811, 1810 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1310, 1514, 1607, 1706 |
| CciI | TCATGA | 1 cut(s) | 1890 |
| CfoI | GCGC | 3 cut(s) | 41, 1144, 1630 |
| Cfr13I | GGNCC | 7 cut(s) | 647, 686, 1112, 1657, 1658, 1771, 1997 |
| CpoI | CGGWCCG | 1 cut(s) | 1997 |
| CseI | GACGC | 2 cut(s) | 1316, 2281 |
| Csp6I | GTAC | 4 cut(s) | 223, 798, 833, 1270 |
| CspI | CGGWCCG | 1 cut(s) | 1997 |
| CviQI | GTAC | 4 cut(s) | 223, 798, 833, 1270 |
| DdeI | CTNAG | 7 cut(s) | 489, 856, 1031, 1311, 1792, 2288, 2342 |
| DraI | TTTAAA | 1 cut(s) | 1533 |
| EaeI | YGGCCR | 1 cut(s) | 611 |
| Eam1104I | CTCTTC | 3 cut(s) | 164, 1430, 2368 |
| EarI | CTCTTC | 3 cut(s) | 164, 1430, 2368 |
| EciI | GGCGGA | 1 cut(s) | 1461 |
| Eco130I | CCWWGG | 6 cut(s) | 776, 873, 1003, 1145, 2136, 2382 |
| Eco24I | GRGCYC | 1 cut(s) | 1661 |
| Eco31I | GGTCTC | 1 cut(s) | 2406 |
| Eco32I | GATATC | 1 cut(s) | 1549 |
| Eco47I | GGWCC | 4 cut(s) | 647, 686, 1112, 1997 |
| Eco57I | CTGAAG | 1 cut(s) | 1647 |
| EcoO109I | RGGNCCY | 4 cut(s) | 686, 1657, 1658, 1771 |
| EcoRII | CCWGG | 6 cut(s) | 409, 464, 886, 1652, 1705, 2008 |
| EcoRV | GATATC | 1 cut(s) | 1549 |
| EcoT14I | CCWWGG | 6 cut(s) | 776, 873, 1003, 1145, 2136, 2382 |
| EcoT22I | ATGCAT | 1 cut(s) | 680 |
| EcoT38I | GRGCYC | 1 cut(s) | 1661 |
| ErhI | CCWWGG | 6 cut(s) | 776, 873, 1003, 1145, 2136, 2382 |
| Esp3I | CGTCTC | 1 cut(s) | 304 |
| FaqI | GGGAC | 3 cut(s) | 880, 985, 1810 |
| FauNDI | CATATG | 1 cut(s) | 1501 |
| FbaI | TGATCA | 5 cut(s) | 187, 433, 1221, 1362, 1474 |
| FokI | GGATG | 7 cut(s) | 688, 829, 1484, 1550, 1636, 1992, 2062 |
| FriOI | GRGCYC | 1 cut(s) | 1661 |
| FspBI | CTAG | 5 cut(s) | 168, 180, 1248, 2097, 2280 |
| GlaI | GCGC | 3 cut(s) | 40, 1143, 1629 |
| GsaI | CCCAGC | 1 cut(s) | 867 |
| GsuI | CTGGAG | 3 cut(s) | 432, 730, 1238 |
| HaeII | RGCGCY | 1 cut(s) | 1631 |
| HaeIII | GGCC | 4 cut(s) | 613, 1430, 1659, 1772 |
| HapII | CCGG | 5 cut(s) | 614, 836, 1025, 1180, 1995 |
| HgaI | GACGC | 2 cut(s) | 1316, 2281 |
| HhaI | GCGC | 3 cut(s) | 41, 1144, 1630 |
| Hin6I | GCGC | 3 cut(s) | 39, 1142, 1628 |
| HinP1I | GCGC | 3 cut(s) | 39, 1142, 1628 |
| HpaII | CCGG | 5 cut(s) | 614, 836, 1025, 1180, 1995 |
| HphI | GGTGA | 3 cut(s) | 281, 765, 2258 |
| Hpy166II | GTNNAC | 4 cut(s) | 223, 334, 1270, 1714 |
| Hpy8I | GTNNAC | 4 cut(s) | 223, 334, 1270, 1714 |
| HpyAV | CCTTC | 4 cut(s) | 661, 1226, 1671, 2215 |
| HpyCH4III | ACNGT | 9 cut(s) | 64, 81, 393, 1129, 1159, 1609, 1636, 1840, 1990 |
| HpyF3I | CTNAG | 7 cut(s) | 489, 856, 1031, 1311, 1792, 2288, 2342 |
| HspAI | GCGC | 3 cut(s) | 39, 1142, 1628 |
| Kpn2I | TCCGGA | 1 cut(s) | 1994 |
| Ksp22I | TGATCA | 5 cut(s) | 187, 433, 1221, 1362, 1474 |
| LweI | GCATC | 6 cut(s) | 138, 528, 566, 851, 955, 1528 |
| MaeI | CTAG | 5 cut(s) | 168, 180, 1248, 2097, 2280 |
| MaeIII | GTNAC | 5 cut(s) | 1037, 1609, 1750, 1984, 2224 |
| MbiI | CCGCTC | 1 cut(s) | 368 |
| MboII | GAAGA | 5 cut(s) | 151, 1447, 1543, 2355, 2399 |
| MflI | RGATCY | 2 cut(s) | 230, 572 |
| MhlI | GDGCHC | 3 cut(s) | 336, 1661, 1791 |
| MluCI | AATT | 9 cut(s) | 135, 945, 1240, 1422, 1458, 1778, 1915, 2178, 2186 |
| MlyI | GAGTC | 8 cut(s) | 497, 557, 626, 737, 1199, 1447, 1873, 2126 |
| MmeI | TCCRAC | 2 cut(s) | 600, 2178 |
| Mph1103I | ATGCAT | 1 cut(s) | 680 |
| MroI | TCCGGA | 1 cut(s) | 1994 |
| MseI | TTAA | 5 cut(s) | 251, 630, 722, 1464, 1532 |
| MslI | CAYNNNNRTG | 1 cut(s) | 661 |
| MspA1I | CMGCKG | 3 cut(s) | 708, 818, 1667 |
| MspI | CCGG | 5 cut(s) | 614, 836, 1025, 1180, 1995 |
| MspR9I | CCNGG | 7 cut(s) | 411, 466, 837, 888, 1654, 1707, 2010 |
| Mva1269I | GAATGC | 1 cut(s) | 956 |
| MvaI | CCWGG | 6 cut(s) | 411, 466, 888, 1654, 1707, 2010 |
| MvnI | CGCG | 3 cut(s) | 41, 1122, 1523 |
| NciI | CCSGG | 1 cut(s) | 837 |
| NdeI | CATATG | 1 cut(s) | 1501 |
| NheI | GCTAGC | 1 cut(s) | 179 |
| NlaIV | GGNNCC | 6 cut(s) | 648, 883, 1317, 1658, 1659, 1773 |
| NmeAIII | GCCGAG | 3 cut(s) | 233, 349, 1076 |
| NmuCI | GTSAC | 2 cut(s) | 1037, 1609 |
| NsiI | ATGCAT | 1 cut(s) | 680 |
| NspI | RCATGY | 5 cut(s) | 678, 806, 1812, 1820, 2395 |
| PaeI | GCATGC | 2 cut(s) | 678, 1812 |
| PagI | TCATGA | 1 cut(s) | 1890 |
| PciI | ACATGT | 2 cut(s) | 1816, 2391 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 747 |
| PctI | GAATGC | 1 cut(s) | 956 |
| PfeI | GAWTC | 5 cut(s) | 360, 652, 770, 1940, 2302 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1069 |
| Ple19I | CGATCG | 1 cut(s) | 2268 |
| PleI | GAGTC | 8 cut(s) | 497, 557, 625, 737, 1198, 1446, 1872, 2126 |
| PpsI | GAGTC | 8 cut(s) | 497, 557, 625, 737, 1198, 1446, 1872, 2126 |
| PpuMI | RGGWCCY | 1 cut(s) | 686 |
| PscI | ACATGT | 2 cut(s) | 1816, 2391 |
| Psp5II | RGGWCCY | 1 cut(s) | 686 |
| Psp6I | CCWGG | 6 cut(s) | 409, 464, 886, 1652, 1705, 2008 |
| PspFI | CCCAGC | 1 cut(s) | 863 |
| PspGI | CCWGG | 6 cut(s) | 409, 464, 886, 1652, 1705, 2008 |
| PspN4I | GGNNCC | 6 cut(s) | 648, 883, 1317, 1658, 1659, 1773 |
| PspOMI | GGGCCC | 1 cut(s) | 1657 |
| PspPI | GGNCC | 7 cut(s) | 647, 686, 1112, 1657, 1658, 1771, 1997 |
| PspPPI | RGGWCCY | 1 cut(s) | 686 |
| PstI | CTGCAG | 1 cut(s) | 238 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1310, 1514, 1607, 1706 |
| PsuI | RGATCY | 2 cut(s) | 230, 572 |
| PvuI | CGATCG | 1 cut(s) | 2268 |
| PvuII | CAGCTG | 2 cut(s) | 708, 1667 |
| RsaI | GTAC | 4 cut(s) | 224, 799, 834, 1271 |
| RsaNI | GTAC | 4 cut(s) | 223, 798, 833, 1270 |
| RseI | CAYNNNNRTG | 1 cut(s) | 661 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1997 |
| RsrII | CGGWCCG | 1 cut(s) | 1997 |
| SaqAI | TTAA | 5 cut(s) | 251, 630, 722, 1464, 1532 |
| Sau96I | GGNCC | 7 cut(s) | 647, 686, 1112, 1657, 1658, 1771, 1997 |
| SchI | GAGTC | 8 cut(s) | 497, 557, 626, 737, 1199, 1447, 1873, 2126 |
| ScrFI | CCNGG | 7 cut(s) | 411, 466, 837, 888, 1654, 1707, 2010 |
| SduI | GDGCHC | 3 cut(s) | 336, 1661, 1791 |
| SfaNI | GCATC | 6 cut(s) | 138, 528, 566, 851, 955, 1528 |
| SfcI | CTRYAG | 3 cut(s) | 234, 261, 1935 |
| SinI | GGWCC | 4 cut(s) | 647, 686, 1112, 1997 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 661 |
| SmlI | CTYRAG | 3 cut(s) | 271, 476, 1685 |
| SmoI | CTYRAG | 3 cut(s) | 271, 476, 1685 |
| SpeI | ACTAGT | 1 cut(s) | 167 |
| SphI | GCATGC | 2 cut(s) | 678, 1812 |
| Sse9I | AATT | 9 cut(s) | 135, 945, 1240, 1422, 1458, 1778, 1915, 2178, 2186 |
| SsiI | CCGC | 9 cut(s) | 41, 69, 117, 366, 818, 1120, 1446, 1521, 2000 |
| SspMI | CTAG | 5 cut(s) | 168, 180, 1248, 2097, 2280 |
| StyD4I | CCNGG | 7 cut(s) | 409, 464, 835, 886, 1652, 1705, 2008 |
| StyI | CCWWGG | 6 cut(s) | 776, 873, 1003, 1145, 2136, 2382 |
| TaaI | ACNGT | 9 cut(s) | 64, 81, 393, 1129, 1159, 1609, 1636, 1840, 1990 |
| TaqI | TCGA | 5 cut(s) | 308, 395, 501, 960, 984 |
| TaqII | GACCGA | 1 cut(s) | 1129 |
| TasI | AATT | 9 cut(s) | 135, 945, 1240, 1422, 1458, 1778, 1915, 2178, 2186 |
| TatI | WGTACW | 1 cut(s) | 222 |
| TauI | GCSGC | 4 cut(s) | 72, 120, 368, 821 |
| TfiI | GAWTC | 5 cut(s) | 360, 652, 770, 1940, 2302 |
| Tru1I | TTAA | 5 cut(s) | 251, 630, 722, 1464, 1532 |
| Tru9I | TTAA | 5 cut(s) | 251, 630, 722, 1464, 1532 |
| TscAI | CASTG | 6 cut(s) | 86, 190, 979, 1042, 1074, 1281 |
| TseFI | GTSAC | 2 cut(s) | 1037, 1609 |
| Tsp45I | GTSAC | 2 cut(s) | 1037, 1609 |
| TspDTI | ATGAA | 7 cut(s) | 92, 96, 690, 695, 1335, 1638, 2037 |
| TspGWI | ACGGA | 1 cut(s) | 328 |
| TspRI | CASTG | 6 cut(s) | 86, 190, 979, 1042, 1074, 1281 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1069 |
| VneI | GTGCAC | 1 cut(s) | 332 |
| VpaK11BI | GGWCC | 4 cut(s) | 647, 686, 1112, 1997 |
| XapI | RAATTY | 3 cut(s) | 1240, 1778, 2186 |
| XceI | RCATGY | 5 cut(s) | 678, 806, 1812, 1820, 2395 |
| XspI | CTAG | 5 cut(s) | 168, 180, 1248, 2097, 2280 |
| Zsp2I | ATGCAT | 1 cut(s) | 680 |