Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0008647

Physical Location & Seq

Genomic Coordinates Reverse (-)

62017250 .. 62022207

Gene Structure 4958 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G037730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGCAGCTTCGGGAGATGATGGTGGTGTTCCTCGTGGCGCGGTAGGGCTGCCTTGTTTTACTATTGGCGGCTTTGCACAATGCGATAAGGGCTTGGTTAGGCTACTTATTACGAGCAACAGCAGCCGAGTTTATATTGTGTACATGGGATCTGCAGCTCCAAACTCTTTAACCAGCACTACAGCTTCCTTGAGGACTGACCATGCTCACCTCCTTGCTTCTCTGTCGAGACGGAAAGCAAATGCGTTGGTGCACATTTACAGGCATGGTTTCGCAGGATTCGCGGCTCGGCTATCAGAGGAGGAGGCACAGTCGATGGCTCAAAAACCTGGAGTTATATCTGTTTTTCCTGACCACTTACTGAAACTCCACACCACTCATTCCTGGGATTTCCTCAAGTATCAGACTGAGTTAGAAATCGACTCATTTCCTAACAGCATCTCCGAGAATGATGATGGTGCTGCTGATGACACAGCACCGGACTCTAATGGATCTGACACTATTATCGGCATTTTAGACACAGGTATTTGGCCGGAGTCGGAGAGTTTTAATGACAAGGATATGGGTCCGATTCCATCAAGGTGGAAGGGAGCATGCATGAAAGGACCTGATTTTACTTCATCCAGCTGTAATAGGAAGTTAATAGGAGCAAGATTTTACAACTCCAGCGATCTAATCACAGACAACGATTCACCAAGGGATTTAGTGGGGCATGGTACGCATGTTGCAGGCACAGCGGCAGGGAGTTTTGCACCGGGTGCATCCTACTATGGCTTAGCTGCTGGGACAGCCAAGGGAGGCTCCCCAGGTTCAAGGATCGCCATGTATAAAGTATGCACAGCAGAGGGTTGCTATGGATCGGCAATTTTAGCAGCATTCGATGATGCTATCAGTGATGGGGTGGATGTTCTATCTGTGTCCCTTGGTTCGTCAAGTTATCAGCCGGAGCTGAGCAGTGACCCCATTGCAATAGGAGCTTTCCATGCAGTGGAGCAGGGGATTATAGTCGTGTCCTCGGCAGGGAATGATGGACCGAACCGAGAAACAGTTGCGAACTTTGCGCCTTGGCTATTGACTGTTGCTGCCTCTACCATTGACCGGAACTTTGAGTCTAATGTGGTCTTGGGGGGAAACAAAGTGATCAAGGGAAAAGGCATAAATTTTTCTAGTCTCCAGAAAGTTCCTGTGTACCCACTGATATATGCACCATCTGCCAAGACAGCAGACGCTGAGGAACCCGAAGCAAGAAACTGCGACAGACATTCATTGGACGAAAAAATGATCAAGGGAAAGATTGTAATCTGCGACACAGATGTTCCTTTTTATACTACTGACAACCAAATTGAGGCCGTGAAGAGTCTTGGCGGAATAGGTGTAATTTTTAACAGGGATGATCATATCGGGATAATAGCAGACACATATGGAGCAGTTCCTGCAACCGCGATCAGTTTAAAGGATGCCAAAGATATCTTCTCCTATATCAACTCAACCAGAAACCCAGTTGCAACAATCTTACCAGCAGAGACTGTGACAAAGTATAAACCAGCGCCAACAGTTGCATATTTTTCATCCAGGGGCCCTTCAGCTGCCACAAATAACATACTCAAGCCTGATATTGCAGCTCCTGGCGTGGACATTCTTGCAGCTTGGACGGGCAATGACACTGTGGTTACTCCATCTGGAAAAGAGGCCCCAAAATTCAATGTGCTCTCAGGGACTTCAATGGCATGCCCACATGTTTCTGGGATAGCAGCCACCGTCAAATCTCAAAACCCCACATGGAGTCCATCAGCCATCAGATCAGCCATCATGACAACAGCAACTCAAATAAACAATTTGAAAACCCCAATCACTACAGATTCAAGTTCAATAGCCACACCATACGATTATGGTGCGGGGGAAGTAACAGTAACTGGACCGCTACGTCCAGGTCTGGTATATGAAACTGACACCATTGACTACTTGAACTACCTCTGCTATTATGGGTTTGATACATCCAAACTCAAAACCATCGCTAGAACTGCTCCAATCGGTTTTGCTTGCCCCAAAGACTCCAAGGCTGATTACATATCCAACATCAACTACCCATCAATAGCAATTTCCAAATTCAATGGAAAAGAAAGCAGGAATATAAGCAGGAAGGTTACAAATGTTGCAGGAGATGGTGAAGTGGTTTTCACAGCGATCGTGGATACACCTAGAGGTCTAAGCGTCAAAGTGATTCCTGATAAACTACATTTTTCAAAGAACAACCAGAAGCTCAGTTATCAAATGGTTTTCTCTTCAACCACATCTGTTCCCAAGGAAGACATGTTTGGGTCTCTTACATGGAGCAATGGAAAGTATAAAGTCCGAAGTCCATTTGTTGTAAGTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002832 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0010033 GO:0010037 GO:0016787 GO:0017171 GO:0019538 GO:0030312 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0042221 GO:0042493 GO:0043170 GO:0043900 GO:0043901 GO:0044238 GO:0044464 GO:0048046 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0065007 GO:0070011 GO:0071704 GO:0071944 GO:0072347 GO:0080134 GO:0140096 GO:1900424 GO:1900425 GO:1901564 GO:1901700 GO:2000026 GO:2000038 GO:2000122

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

792

Amino Acids

84.0

Weight (kDa)

6.0

Isoelectric Point (pI)

33.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	44 - 124	1.5e-17	Peptidase inhibitor I9
Peptidase_S8	PF00082	164 - 619	2.7e-50	Subtilase family
fn3_6	PF17766	692 - 790	2.7e-26	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008647)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20150 AT1G20160 AT1G20160 AT1G20160
fragaria_vesca	FvH4_2g38090
malus_domestica	MD08G1009400.v1.1
prunus_persica	Prupe.1G361300_v2.0.a1
pyrus_communis	pycom08g00790 pycom15g00680 pycom15g00690
rosa_chinensis	RchiOBHm_Chr3g0451701 RchiOBHm_Chr6g0303461
rosa_laevigata	RLG00000011082
rosa_multiflora	Rmu_ssc0000114.1_g000050
rosa_roxburghii	Rroxscaffold_7G00164720 Rroxscaffold_7G00164730
rosa_rugosa	Rorug06G0321400 Rorug06G0321500
rosa_samantha	Rh6AG436000 Rh6BG467600 Rh6CG447900 Rh6DG434600
rosa_wichuraiana	Rw6G037730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1923
AccB7I	CCANNNNNTGG	1 cut(s)	988
AccII	CGCG	3 cut(s)	41, 284, 1442
AciI	CCGC	8 cut(s)	41, 69, 284, 737, 1365, 1440, 1895, 1919
AclWI	GGATC	4 cut(s)	157, 499, 824, 865
AcoI	YGGCCR	1 cut(s)	530
AcsI	RAATTY	3 cut(s)	1159, 1697, 2105
AcuI	CTGAAG	1 cut(s)	1566
AdeI	CACNNNGTG	1 cut(s)	758
AfaI	GTAC	3 cut(s)	143, 718, 1190
AfiI	CCNNNNNNNGG	4 cut(s)	988, 1020, 1098, 1345
AflIII	ACRYGT	2 cut(s)	1735, 2310
AjnI	CCWGG	6 cut(s)	328, 383, 805, 1571, 1624, 1927
AjuI	GAANNNNNNNTTGG	4 cut(s)	1454, 1486, 2298, 2330
Alw21I	GWGCWC	2 cut(s)	255, 1710
Alw26I	GTCTC	4 cut(s)	223, 1175, 1517, 2325
Alw44I	GTGCAC	1 cut(s)	251
AlwI	GGATC	4 cut(s)	157, 499, 824, 865
AlwNI	CAGNNNCTG	5 cut(s)	1229, 1433, 1526, 1625, 1913
AoxI	GGCC	4 cut(s)	530, 1347, 1576, 1689
ApaI	GGGCCC	1 cut(s)	1580
ApaLI	GTGCAC	1 cut(s)	251
ApoI	RAATTY	3 cut(s)	1159, 1697, 2105
ArsI	GACNNNNNNTTYG	2 cut(s)	1088, 1120
AspLEI	GCGC	3 cut(s)	41, 1063, 1549
AspS9I	GGNCC	7 cut(s)	566, 605, 1031, 1576, 1577, 1690, 1916
AsuC2I	CCSGG	1 cut(s)	756
AsuHPI	GGTGA	3 cut(s)	200, 684, 2177
AvaII	GGWCC	4 cut(s)	566, 605, 1031, 1916
BaeGI	GKGCMC	2 cut(s)	255, 1580
BaeI	ACNNNNGTAYC	2 cut(s)	708, 741
BanII	GRGCYC	1 cut(s)	1580
BauI	CACGAG	1 cut(s)	33
BbsI	GAAGAC	1 cut(s)	2313
Bbv12I	GWGCWC	2 cut(s)	255, 1710
BbvCI	CCTCAGC	1 cut(s)	1230
BceAI	ACGGC	1 cut(s)	1334
BcgI	CGANNNNNNTGC	2 cut(s)	1874, 1908
BciT130I	CCWGG	6 cut(s)	330, 385, 807, 1573, 1626, 1929
BciVI	GTATCC	1 cut(s)	2185
BclI	TGATCA	3 cut(s)	1140, 1281, 1393
BcnI	CCSGG	1 cut(s)	756
BcoDI	GTCTC	4 cut(s)	223, 1175, 1517, 2325
BfaI	CTAG	3 cut(s)	1167, 2016, 2199
BfmI	CTRYAG	3 cut(s)	153, 180, 1854
BfoI	RGCGCY	1 cut(s)	1550
BfuI	GTATCC	1 cut(s)	2185
BlpI	GCTNAGC	2 cut(s)	775, 950
Bme1390I	CCNGG	7 cut(s)	330, 385, 756, 807, 1573, 1626, 1929
Bme18I	GGWCC	4 cut(s)	566, 605, 1031, 1916
BmgT120I	GGNCC	7 cut(s)	566, 605, 1031, 1576, 1577, 1690, 1916
BmiI	GGNNCC	6 cut(s)	567, 802, 1236, 1577, 1578, 1692
BmrFI	CCNGG	7 cut(s)	330, 385, 756, 807, 1573, 1626, 1929
BmrI	ACTGGG	1 cut(s)	1493
BmsI	GCATC	4 cut(s)	447, 770, 874, 1447
BmuI	ACTGGG	1 cut(s)	1493
BpiI	GAAGAC	1 cut(s)	2313
BpmI	CTGGAG	3 cut(s)	351, 649, 1157
Bpu10I	CCTNAGC	1 cut(s)	1230
Bpu1102I	GCTNAGC	2 cut(s)	775, 950
BpuEI	CTTGAG	3 cut(s)	211, 380, 1589
BpuMI	CCSGG	1 cut(s)	756
BsaBI	GATNNNNATC	1 cut(s)	1298
BsaI	GGTCTC	1 cut(s)	2325
BsaWI	WCCGGW	2 cut(s)	478, 1098
BsaXI	ACNNNNNCTCC	6 cut(s)	296, 326, 351, 381, 425, 455
Bsc4I	CCNNNNNNNGG	4 cut(s)	988, 1020, 1098, 1345
Bse1I	ACTGG	2 cut(s)	1499, 1918
Bse3DI	GCAATG	3 cut(s)	963, 1663, 2341
Bse8I	GATNNNNATC	1 cut(s)	1298
BseBI	CCWGG	6 cut(s)	330, 385, 807, 1573, 1626, 1929
BseGI	GGATG	7 cut(s)	620, 761, 910, 1396, 1462, 1568, 1994
BseJI	GATNNNNATC	1 cut(s)	1298
BseLI	CCNNNNNNNGG	4 cut(s)	988, 1020, 1098, 1345
BseMI	GCAATG	3 cut(s)	963, 1663, 2341
BseMII	CTCAG	5 cut(s)	399, 941, 1221, 1725, 2275
BseNI	ACTGG	2 cut(s)	1499, 1918
BseRI	GAGGAG	2 cut(s)	314, 317
BseSI	GKGCMC	2 cut(s)	255, 1580
BseYI	CCCAGC	1 cut(s)	782
Bsh1236I	CGCG	3 cut(s)	41, 284, 1442
Bsh1285I	CGRYCG	1 cut(s)	2187
BshFI	GGCC	4 cut(s)	532, 1349, 1578, 1691
BsiEI	CGRYCG	1 cut(s)	2187
BsiHKAI	GWGCWC	2 cut(s)	255, 1710
BsiSI	CCGG	5 cut(s)	479, 533, 755, 944, 1099
BslFI	GGGAC	3 cut(s)	799, 904, 1729
BslI	CCNNNNNNNGG	4 cut(s)	988, 1020, 1098, 1345
BsmAI	GTCTC	4 cut(s)	223, 1175, 1517, 2325
BsmBI	CGTCTC	1 cut(s)	223
BsmFI	GGGAC	3 cut(s)	799, 904, 1729
BsmI	GAATGC	1 cut(s)	875
BsnI	GGCC	4 cut(s)	532, 1349, 1578, 1691
Bso31I	GGTCTC	1 cut(s)	2325
Bsp120I	GGGCCC	1 cut(s)	1576
Bsp1286I	GDGCHC	3 cut(s)	255, 1580, 1710
Bsp1407I	TGTACA	1 cut(s)	141
Bsp1720I	GCTNAGC	2 cut(s)	775, 950
BspACI	CCGC	8 cut(s)	41, 69, 284, 737, 1365, 1440, 1895, 1919
BspANI	GGCC	4 cut(s)	532, 1349, 1578, 1691
BspCNI	CTCAG	5 cut(s)	400, 942, 1222, 1724, 2274
BspFNI	CGCG	3 cut(s)	41, 284, 1442
BspHI	TCATGA	1 cut(s)	1809
BspLI	GGNNCC	6 cut(s)	567, 802, 1236, 1577, 1578, 1692
BspMAI	CTGCAG	1 cut(s)	157
BspPI	GGATC	4 cut(s)	157, 499, 824, 865
BspTNI	GGTCTC	1 cut(s)	2325
BsrDI	GCAATG	3 cut(s)	963, 1663, 2341
BsrGI	TGTACA	1 cut(s)	141
BsrI	ACTGG	2 cut(s)	1499, 1918
BssSI	CACGAG	1 cut(s)	33
BssT1I	CCWWGG	6 cut(s)	695, 792, 922, 1064, 2055, 2301
Bst2BI	CACGAG	1 cut(s)	33
Bst2UI	CCWGG	6 cut(s)	330, 385, 807, 1573, 1626, 1929
Bst4CI	ACNGT	8 cut(s)	312, 1048, 1078, 1528, 1555, 1666, 1759, 1909
Bst6I	CTCTTC	2 cut(s)	1349, 2287
BstAPI	GCANNNNNTGC	3 cut(s)	758, 1211, 1433
BstAUI	TGTACA	1 cut(s)	141
BstC8I	GCNNGC	4 cut(s)	595, 730, 1729, 2041
BstDEI	CTNAG	7 cut(s)	408, 775, 950, 1230, 1711, 2207, 2261
BstF5I	GGATG	7 cut(s)	620, 761, 910, 1396, 1462, 1568, 1994
BstFNI	CGCG	3 cut(s)	41, 284, 1442
BstH2I	RGCGCY	1 cut(s)	1550
BstHHI	GCGC	3 cut(s)	41, 1063, 1549
BstMAI	GTCTC	4 cut(s)	223, 1175, 1517, 2325
BstMCI	CGRYCG	1 cut(s)	2187
BstNI	CCWGG	6 cut(s)	330, 385, 807, 1573, 1626, 1929
BstNSI	RCATGY	5 cut(s)	597, 725, 1731, 1739, 2314
BstSCI	CCNGG	7 cut(s)	328, 383, 754, 805, 1571, 1624, 1927
BstSFI	CTRYAG	3 cut(s)	153, 180, 1854
BstSLI	GKGCMC	2 cut(s)	255, 1580
BstUI	CGCG	3 cut(s)	41, 284, 1442
BstV2I	GAAGAC	1 cut(s)	2313
BstX2I	RGATCY	2 cut(s)	149, 491
BstXI	CCANNNNNNTGG	1 cut(s)	582
BstYI	RGATCY	2 cut(s)	149, 491
BsuI	GTATCC	1 cut(s)	2185
BsuRI	GGCC	4 cut(s)	532, 1349, 1578, 1691
BtgZI	GCGATG	1 cut(s)	1996
BtsCI	GGATG	7 cut(s)	620, 761, 910, 1396, 1462, 1568, 1994
BtsI	GCAGTG	2 cut(s)	961, 993
BtsIMutI	CAGTG	5 cut(s)	898, 961, 993, 1193, 1662
Cac8I	GCNNGC	4 cut(s)	595, 730, 1729, 2041
CaiI	CAGNNNCTG	5 cut(s)	1229, 1433, 1526, 1625, 1913
CciI	TCATGA	1 cut(s)	1809
CfoI	GCGC	3 cut(s)	41, 1063, 1549
Cfr13I	GGNCC	7 cut(s)	566, 605, 1031, 1576, 1577, 1690, 1916
CseI	GACGC	2 cut(s)	1235, 2200
Csp6I	GTAC	3 cut(s)	142, 717, 1189
CviQI	GTAC	3 cut(s)	142, 717, 1189
DdeI	CTNAG	7 cut(s)	408, 775, 950, 1230, 1711, 2207, 2261
DraI	TTTAAA	1 cut(s)	1452
DraIII	CACNNNGTG	1 cut(s)	758
DrdI	GACNNNNNNGTC	1 cut(s)	1923
DseDI	GACNNNNNNGTC	1 cut(s)	1923
EaeI	YGGCCR	1 cut(s)	530
Eam1104I	CTCTTC	2 cut(s)	1349, 2287
EarI	CTCTTC	2 cut(s)	1349, 2287
EciI	GGCGGA	1 cut(s)	1380
Eco130I	CCWWGG	6 cut(s)	695, 792, 922, 1064, 2055, 2301
Eco24I	GRGCYC	1 cut(s)	1580
Eco31I	GGTCTC	1 cut(s)	2325
Eco32I	GATATC	1 cut(s)	1468
Eco47I	GGWCC	4 cut(s)	566, 605, 1031, 1916
Eco57I	CTGAAG	1 cut(s)	1566
EcoO109I	RGGNCCY	4 cut(s)	605, 1576, 1577, 1690
EcoRII	CCWGG	6 cut(s)	328, 383, 805, 1571, 1624, 1927
EcoRV	GATATC	1 cut(s)	1468
EcoT14I	CCWWGG	6 cut(s)	695, 792, 922, 1064, 2055, 2301
EcoT22I	ATGCAT	1 cut(s)	599
EcoT38I	GRGCYC	1 cut(s)	1580
ErhI	CCWWGG	6 cut(s)	695, 792, 922, 1064, 2055, 2301
Esp3I	CGTCTC	1 cut(s)	223
FaqI	GGGAC	3 cut(s)	799, 904, 1729
FauI	CCCGC	1 cut(s)	1888
FauNDI	CATATG	1 cut(s)	1420
FbaI	TGATCA	3 cut(s)	1140, 1281, 1393
FokI	GGATG	7 cut(s)	607, 748, 917, 1403, 1469, 1555, 1981
FriOI	GRGCYC	1 cut(s)	1580
FspBI	CTAG	3 cut(s)	1167, 2016, 2199
GlaI	GCGC	3 cut(s)	40, 1062, 1548
GsaI	CCCAGC	1 cut(s)	786
GsuI	CTGGAG	3 cut(s)	351, 649, 1157
HaeII	RGCGCY	1 cut(s)	1550
HaeIII	GGCC	4 cut(s)	532, 1349, 1578, 1691
HapII	CCGG	5 cut(s)	479, 533, 755, 944, 1099
HgaI	GACGC	2 cut(s)	1235, 2200
HhaI	GCGC	3 cut(s)	41, 1063, 1549
Hin6I	GCGC	3 cut(s)	39, 1061, 1547
HinP1I	GCGC	3 cut(s)	39, 1061, 1547
HpaII	CCGG	5 cut(s)	479, 533, 755, 944, 1099
HphI	GGTGA	3 cut(s)	200, 684, 2177
Hpy166II	GTNNAC	4 cut(s)	142, 253, 1189, 1633
Hpy188I	TCNGA	8 cut(s)	298, 405, 445, 496, 541, 570, 1799, 2354
Hpy188III	TCNNGA	8 cut(s)	12, 228, 350, 1174, 1402, 1680, 1810, 2225
Hpy8I	GTNNAC	4 cut(s)	142, 253, 1189, 1633
HpyAV	CCTTC	3 cut(s)	580, 1590, 2134
HpyCH4III	ACNGT	8 cut(s)	312, 1048, 1078, 1528, 1555, 1666, 1759, 1909
HpyCH4IV	ACGT	1 cut(s)	1924
HpyF3I	CTNAG	7 cut(s)	408, 775, 950, 1230, 1711, 2207, 2261
HpySE526I	ACGT	1 cut(s)	1924
HspAI	GCGC	3 cut(s)	39, 1061, 1547
Ksp22I	TGATCA	3 cut(s)	1140, 1281, 1393
LweI	GCATC	4 cut(s)	447, 770, 874, 1447
MaeI	CTAG	3 cut(s)	1167, 2016, 2199
MaeII	ACGT	1 cut(s)	1924
MaeIII	GTNAC	6 cut(s)	956, 1528, 1669, 1903, 1909, 2143
MboII	GAAGA	4 cut(s)	1366, 1462, 2274, 2318
MflI	RGATCY	2 cut(s)	149, 491
MhlI	GDGCHC	3 cut(s)	255, 1580, 1710
MluCI	AATT	8 cut(s)	864, 1159, 1341, 1377, 1697, 1834, 2097, 2105
MlyI	GAGTC	7 cut(s)	416, 476, 545, 1118, 1366, 1792, 2045
MmeI	TCCRAC	2 cut(s)	519, 2097
Mph1103I	ATGCAT	1 cut(s)	599
MseI	TTAA	5 cut(s)	170, 549, 641, 1383, 1451
MslI	CAYNNNNRTG	1 cut(s)	580
MspA1I	CMGCKG	3 cut(s)	627, 737, 1586
MspI	CCGG	5 cut(s)	479, 533, 755, 944, 1099
MspR9I	CCNGG	7 cut(s)	330, 385, 756, 807, 1573, 1626, 1929
Mva1269I	GAATGC	1 cut(s)	875
MvaI	CCWGG	6 cut(s)	330, 385, 807, 1573, 1626, 1929
MvnI	CGCG	3 cut(s)	41, 284, 1442
NciI	CCSGG	1 cut(s)	756
NdeI	CATATG	1 cut(s)	1420
NlaIV	GGNNCC	6 cut(s)	567, 802, 1236, 1577, 1578, 1692
NmeAIII	GCCGAG	3 cut(s)	152, 268, 995
NmuCI	GTSAC	2 cut(s)	956, 1528
NsiI	ATGCAT	1 cut(s)	599
NspI	RCATGY	5 cut(s)	597, 725, 1731, 1739, 2314
PaeI	GCATGC	2 cut(s)	597, 1731
PagI	TCATGA	1 cut(s)	1809
PciI	ACATGT	2 cut(s)	1735, 2310
PctI	GAATGC	1 cut(s)	875
PfeI	GAWTC	5 cut(s)	279, 571, 689, 1859, 2221
PflMI	CCANNNNNTGG	1 cut(s)	988
Ple19I	CGATCG	1 cut(s)	2187
PleI	GAGTC	7 cut(s)	416, 476, 544, 1117, 1365, 1791, 2045
PpsI	GAGTC	7 cut(s)	416, 476, 544, 1117, 1365, 1791, 2045
PpuMI	RGGWCCY	1 cut(s)	605
PscI	ACATGT	2 cut(s)	1735, 2310
Psp5II	RGGWCCY	1 cut(s)	605
Psp6I	CCWGG	6 cut(s)	328, 383, 805, 1571, 1624, 1927
PspFI	CCCAGC	1 cut(s)	782
PspGI	CCWGG	6 cut(s)	328, 383, 805, 1571, 1624, 1927
PspN4I	GGNNCC	6 cut(s)	567, 802, 1236, 1577, 1578, 1692
PspOMI	GGGCCC	1 cut(s)	1576
PspPI	GGNCC	7 cut(s)	566, 605, 1031, 1576, 1577, 1690, 1916
PspPPI	RGGWCCY	1 cut(s)	605
PstI	CTGCAG	1 cut(s)	157
PstNI	CAGNNNCTG	5 cut(s)	1229, 1433, 1526, 1625, 1913
PsuI	RGATCY	2 cut(s)	149, 491
PvuI	CGATCG	1 cut(s)	2187
PvuII	CAGCTG	2 cut(s)	627, 1586
RsaI	GTAC	3 cut(s)	143, 718, 1190
RsaNI	GTAC	3 cut(s)	142, 717, 1189
RseI	CAYNNNNRTG	1 cut(s)	580
SaqAI	TTAA	5 cut(s)	170, 549, 641, 1383, 1451
Sau96I	GGNCC	7 cut(s)	566, 605, 1031, 1576, 1577, 1690, 1916
SchI	GAGTC	7 cut(s)	416, 476, 545, 1118, 1366, 1792, 2045
ScrFI	CCNGG	7 cut(s)	330, 385, 756, 807, 1573, 1626, 1929
SduI	GDGCHC	3 cut(s)	255, 1580, 1710
SfaNI	GCATC	4 cut(s)	447, 770, 874, 1447
SfcI	CTRYAG	3 cut(s)	153, 180, 1854
SinI	GGWCC	4 cut(s)	566, 605, 1031, 1916
SmiMI	CAYNNNNRTG	1 cut(s)	580
SmlI	CTYRAG	3 cut(s)	190, 395, 1604
SmoI	CTYRAG	3 cut(s)	190, 395, 1604
SphI	GCATGC	2 cut(s)	597, 1731
Sse9I	AATT	8 cut(s)	864, 1159, 1341, 1377, 1697, 1834, 2097, 2105
SsiI	CCGC	8 cut(s)	41, 69, 284, 737, 1365, 1440, 1895, 1919
SspMI	CTAG	3 cut(s)	1167, 2016, 2199
StyD4I	CCNGG	7 cut(s)	328, 383, 754, 805, 1571, 1624, 1927
StyI	CCWWGG	6 cut(s)	695, 792, 922, 1064, 2055, 2301
TaaI	ACNGT	8 cut(s)	312, 1048, 1078, 1528, 1555, 1666, 1759, 1909
TaiI	ACGT	1 cut(s)	1927
TaqI	TCGA	4 cut(s)	227, 314, 420, 879
TaqII	GACCGA	1 cut(s)	1048
TasI	AATT	8 cut(s)	864, 1159, 1341, 1377, 1697, 1834, 2097, 2105
TatI	WGTACW	1 cut(s)	141
TauI	GCSGC	3 cut(s)	72, 287, 740
TfiI	GAWTC	5 cut(s)	279, 571, 689, 1859, 2221
Tru1I	TTAA	5 cut(s)	170, 549, 641, 1383, 1451
Tru9I	TTAA	5 cut(s)	170, 549, 641, 1383, 1451
TscAI	CASTG	5 cut(s)	898, 961, 993, 1200, 1669
TseFI	GTSAC	2 cut(s)	956, 1528
Tsp45I	GTSAC	2 cut(s)	956, 1528
TspDTI	ATGAA	5 cut(s)	609, 614, 1254, 1557, 1956
TspGWI	ACGGA	1 cut(s)	247
TspRI	CASTG	5 cut(s)	898, 961, 993, 1200, 1669
Van91I	CCANNNNNTGG	1 cut(s)	988
VneI	GTGCAC	1 cut(s)	251
VpaK11BI	GGWCC	4 cut(s)	566, 605, 1031, 1916
XapI	RAATTY	3 cut(s)	1159, 1697, 2105
XceI	RCATGY	5 cut(s)	597, 725, 1731, 1739, 2314
XspI	CTAG	3 cut(s)	1167, 2016, 2199
Zsp2I	ATGCAT	1 cut(s)	599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.