Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0008647

Physical Location & Seq

Genomic Coordinates Reverse (-)

61315724 .. 61318844

Gene Structure 3121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG434600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGGGCATGGCAGGCATCTCAATTTTCTTGACATTTGTGGTTCTCTTCCTTACTAGTACTAAAGCTAGCACTGATCAGACGAGCAACAGCAGCCGAGTTTATATTGTGTACATGGGATCTGCAGCTCCAAACTCTTTAACCAGCACTACAGCTTCCTTGAGGACTGACCATGCTCGCCTCCTTACTTCTCTGTCGAGACGGAAAGCAAATGCGTTGGTGCACATTTACAGGCATGGTTTCGCAGGATTCGCGGCTCGGCTATCAGAGGAGGAGGCACAGTCGATGGCTCAAAAACCTGGAGTTATATCTGTTTTTCCTGATCACTTACTGAAACTCCACACCACTCATTCCTGGGATTTCCTCAAGTATCAGACTGAGTTAGAAATCGACTCATTTCCTAACAGCATCTCCGAGAATGATGATGGTGCTGCTGATGACACAGCACCGGACTCTAATGGATCTGACACCATTATCGGCATTTTAGACACAGGTATTTGGCCGGAGTCGGAGAGTTTTAATGACAAGGATATGGGTCCGATTCCATCAAGGTGGAAGGGAGCATGCATGAAAGGACCTGATTTTACTTCATCCAGCTGTAATAGGAAGTTAATAGGAGCAAGATTTTACAACTCCAGCGATCTAATCACAGACAACGATTCACCAAGGGATTTAGTGGGGCATGGTACGCATGTTGCAGGCACAGCGGCAGGGAGTTTTGTACCGGGTGCATCCTACTATGGCTTAGCTGCTGGGATAGCCAAGGGAGGCTCCCCAGGTTCAAGGATCGCCATGTATAAAGTATGCACAACAGAGGGTTGCTATGGATCGGCAATTTTAGCAGCATTCGATGATGCTATCAGTGATGGGGTGGATGTTCTATCTGTGTCCCTTGGTTCGTCAAGTTATCAGCCGGAGCTGAGCAGTGACCCCATTGCAATAGGAGCTTTCCATGCAGTGGAGCAGGGGATTATAGTCGTGTCCTCGGCAGGGAATGATGGACCGAACCGCGAAACAGTTGCGAACTTTGCGCCTTGGCTATTGACTGTTGCTGCCTCTACCATTGACCGGAACTTTGAGTCTAATGTGGTCTTGGGGGGAAACAAAGTGATCAAGGGAGAAGGCATAAATTTTTCTAGTCTCCAGAAAGTTCCTGTGTACCCACTGATATATGCACCATCTGCCAAGACAGCAGACGCTGAGGAACCCGAAGCAAGAAACTGCGACAGACATTCATTGGACGAAAAAATGATCAAGGGAAAGATTGTAATCTGCGACACAGATGTACCTTTTTATACTACTGACAACCAAATTGAGGCCGTGAAGAGTCTTGGCGGAATAGGTGTAATTTTTAACAGGGATGATCATATCGGGATAATAGCAGACACATATGGAGCAGTTCCTGCAACCGCGATCAGTTTAAAGGATGCCAAAGATATCTTCTCCTATATCAACTCAACCAGAAACCCAGTTGCAACAATCTTACCAACAGAGACTGTGACAAAGTATAAACCAGCGCCCACAGTTGCATATTTTTCATCCAGGGGCCCTTCAGCTGCCACAAATAACATACTCAAGCCTGATATTGCAGCTCCTGGTGTGGACATTCTTGCAGCTTGGACGGGCAATGACATGGTGGTTACTCCATCTGGAAAAGAGGCCCCAAAATTCAATGTGCTCTCAGGGACTTCAATGGCATGCCCACATGTTTCTGGGATAGCAACCACCGTCAAATCTCAAAACCCCACATGGAGTCCATCAGCCATCAGATCAGCCATCATGACAACAGCAACTCGAATAAACAATTTGAAAACCGCAATCACTACAGATTCAAGTTCAATAGCCACACCATACGATTATGGTGCGGGGGAAGTAACAGTAACTGGACCGCTACATCCAGGTCTGGTATATGAAACTGACACCATTGATTACTTGAACTACCTCTGCTATTATGGGTTTGATACATCCAAACTCAAAACCATCGCTAGAACTGCTCCAATAGGTTTTGCTTGCCCCAAAGACTCCAAGGCTGATTACATATCCAACATCAACTACCCATCAATAGCAATTTCCAAATTCAATGGAAAAGAAAGCAGGAATATAAGCAGGAAGGTTACAAATGTTGCAGGAGATGGTGAAGTGGTTTTCACAGCGATCGTGGATACACCTAGAGGTCTAAGCGTCAAAGTGATTCCTGATAAACTACATTTTTCAAAGAACAACCAGAAGCTCAGTTATCAAATGGTTTTCTCTTCAACCGCATATGTTCCCAAGGAAGACATGTTTGGGTCTCTTACATGGAGCAATGGAAAGTATAAAGTCCGAAGTCCATTTGTTGTAAGTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002832 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0010033 GO:0010037 GO:0016787 GO:0017171 GO:0019538 GO:0030312 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0042221 GO:0042493 GO:0043170 GO:0043900 GO:0043901 GO:0044238 GO:0044464 GO:0048046 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0065007 GO:0070011 GO:0071704 GO:0071944 GO:0072347 GO:0080134 GO:0140096 GO:1900424 GO:1900425 GO:1901564 GO:1901700 GO:2000026 GO:2000038 GO:2000122

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

781

Amino Acids

83.36

Weight (kDa)

5.91

Isoelectric Point (pI)

33.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	33 - 113	5.7e-18	Peptidase inhibitor I9
Peptidase_S8	PF00082	153 - 608	2.7e-49	Subtilase family
fn3_6	PF17766	681 - 779	6.7e-26	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008647)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20150 AT1G20160 AT1G20160 AT1G20160
fragaria_vesca	FvH4_2g38090
malus_domestica	MD08G1009400.v1.1
prunus_persica	Prupe.1G361300_v2.0.a1
pyrus_communis	pycom08g00790 pycom15g00680 pycom15g00690
rosa_chinensis	RchiOBHm_Chr3g0451701 RchiOBHm_Chr6g0303461
rosa_laevigata	RLG00000011082
rosa_multiflora	Rmu_ssc0000114.1_g000050
rosa_roxburghii	Rroxscaffold_7G00164720 Rroxscaffold_7G00164730
rosa_rugosa	Rorug06G0321400 Rorug06G0321500
rosa_samantha	Rh6AG436000 Rh6BG467600 Rh6CG447900 Rh6DG434600
rosa_wichuraiana	Rw6G037730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	955
AccII	CGCG	3 cut(s)	251, 1008, 1409
AciI	CCGC	9 cut(s)	251, 704, 1006, 1332, 1407, 1812, 1862, 1886, 2256
AclWI	GGATC	4 cut(s)	124, 466, 791, 832
AcoI	YGGCCR	1 cut(s)	497
AcsI	RAATTY	3 cut(s)	1126, 1664, 2072
AcuI	CTGAAG	1 cut(s)	1533
AfaI	GTAC	6 cut(s)	58, 110, 685, 720, 1157, 1284
AfiI	CCNNNNNNNGG	4 cut(s)	955, 987, 1065, 1312
AflIII	ACRYGT	2 cut(s)	1702, 2277
AhlI	ACTAGT	1 cut(s)	53
AjnI	CCWGG	6 cut(s)	295, 350, 772, 1538, 1591, 1894
AjuI	GAANNNNNNNTTGG	4 cut(s)	1421, 1453, 2265, 2297
Alw21I	GWGCWC	2 cut(s)	222, 1677
Alw26I	GTCTC	4 cut(s)	190, 1142, 1484, 2292
Alw44I	GTGCAC	1 cut(s)	218
AlwI	GGATC	4 cut(s)	124, 466, 791, 832
AlwNI	CAGNNNCTG	5 cut(s)	1196, 1400, 1493, 1592, 1880
AoxI	GGCC	4 cut(s)	497, 1314, 1543, 1656
ApaI	GGGCCC	1 cut(s)	1547
ApaLI	GTGCAC	1 cut(s)	218
ApeKI	GCWGC	9 cut(s)	90, 122, 428, 746, 839, 1049, 1553, 1586, 1610
ApoI	RAATTY	3 cut(s)	1126, 1664, 2072
ArsI	GACNNNNNNTTYG	2 cut(s)	1055, 1087
AspLEI	GCGC	2 cut(s)	1030, 1516
AspS9I	GGNCC	7 cut(s)	533, 572, 998, 1543, 1544, 1657, 1883
AsuC2I	CCSGG	1 cut(s)	723
AsuHPI	GGTGA	2 cut(s)	651, 2144
AsuNHI	GCTAGC	1 cut(s)	65
AvaII	GGWCC	4 cut(s)	533, 572, 998, 1883
BaeGI	GKGCMC	2 cut(s)	222, 1547
BaeI	ACNNNNGTAYC	4 cut(s)	675, 708, 1266, 1299
BanII	GRGCYC	1 cut(s)	1547
BbsI	GAAGAC	1 cut(s)	2280
Bbv12I	GWGCWC	2 cut(s)	222, 1677
BbvCI	CCTCAGC	1 cut(s)	1197
BbvI	GCAGC	9 cut(s)	102, 134, 415, 733, 851, 1036, 1540, 1598, 1622
BceAI	ACGGC	1 cut(s)	1301
BcgI	CGANNNNNNTGC	4 cut(s)	998, 1032, 1841, 1875
BciT130I	CCWGG	6 cut(s)	297, 352, 774, 1540, 1593, 1896
BciVI	GTATCC	1 cut(s)	2152
BclI	TGATCA	5 cut(s)	73, 319, 1107, 1248, 1360
BcnI	CCSGG	1 cut(s)	723
BcoDI	GTCTC	4 cut(s)	190, 1142, 1484, 2292
BcuI	ACTAGT	1 cut(s)	53
BfaI	CTAG	5 cut(s)	54, 66, 1134, 1983, 2166
BfmI	CTRYAG	3 cut(s)	120, 147, 1821
BfoI	RGCGCY	1 cut(s)	1517
BfuI	GTATCC	1 cut(s)	2152
BlpI	GCTNAGC	2 cut(s)	742, 917
BmcAI	AGTACT	1 cut(s)	58
Bme1390I	CCNGG	7 cut(s)	297, 352, 723, 774, 1540, 1593, 1896
Bme18I	GGWCC	4 cut(s)	533, 572, 998, 1883
BmgT120I	GGNCC	7 cut(s)	533, 572, 998, 1543, 1544, 1657, 1883
BmiI	GGNNCC	6 cut(s)	534, 769, 1203, 1544, 1545, 1659
BmrFI	CCNGG	7 cut(s)	297, 352, 723, 774, 1540, 1593, 1896
BmrI	ACTGGG	1 cut(s)	1460
BmsI	GCATC	5 cut(s)	24, 414, 737, 841, 1414
BmtI	GCTAGC	1 cut(s)	69
BmuI	ACTGGG	1 cut(s)	1460
BpiI	GAAGAC	1 cut(s)	2280
BpmI	CTGGAG	3 cut(s)	318, 616, 1124
Bpu10I	CCTNAGC	1 cut(s)	1197
Bpu1102I	GCTNAGC	2 cut(s)	742, 917
BpuEI	CTTGAG	3 cut(s)	178, 347, 1556
BpuMI	CCSGG	1 cut(s)	723
BsaBI	GATNNNNATC	1 cut(s)	1265
BsaI	GGTCTC	1 cut(s)	2292
BsaWI	WCCGGW	2 cut(s)	445, 1065
BsaXI	ACNNNNNCTCC	6 cut(s)	263, 293, 318, 348, 392, 422
Bsc4I	CCNNNNNNNGG	4 cut(s)	955, 987, 1065, 1312
Bse1I	ACTGG	2 cut(s)	1466, 1885
Bse3DI	GCAATG	3 cut(s)	930, 1630, 2308
Bse8I	GATNNNNATC	1 cut(s)	1265
BseBI	CCWGG	6 cut(s)	297, 352, 774, 1540, 1593, 1896
BseGI	GGATG	8 cut(s)	587, 728, 877, 1363, 1429, 1535, 1891, 1961
BseJI	GATNNNNATC	1 cut(s)	1265
BseLI	CCNNNNNNNGG	4 cut(s)	955, 987, 1065, 1312
BseMI	GCAATG	3 cut(s)	930, 1630, 2308
BseMII	CTCAG	5 cut(s)	366, 908, 1188, 1692, 2242
BseNI	ACTGG	2 cut(s)	1466, 1885
BseRI	GAGGAG	2 cut(s)	281, 284
BseSI	GKGCMC	2 cut(s)	222, 1547
BseXI	GCAGC	9 cut(s)	102, 134, 415, 733, 851, 1036, 1540, 1598, 1622
BseYI	CCCAGC	1 cut(s)	749
Bsh1236I	CGCG	3 cut(s)	251, 1008, 1409
Bsh1285I	CGRYCG	1 cut(s)	2154
BshFI	GGCC	4 cut(s)	499, 1316, 1545, 1658
BsiEI	CGRYCG	1 cut(s)	2154
BsiHKAI	GWGCWC	2 cut(s)	222, 1677
BsiSI	CCGG	5 cut(s)	446, 500, 722, 911, 1066
BslFI	GGGAC	2 cut(s)	871, 1696
BslI	CCNNNNNNNGG	4 cut(s)	955, 987, 1065, 1312
BsmAI	GTCTC	4 cut(s)	190, 1142, 1484, 2292
BsmBI	CGTCTC	1 cut(s)	190
BsmFI	GGGAC	2 cut(s)	871, 1696
BsmI	GAATGC	1 cut(s)	842
BsnI	GGCC	4 cut(s)	499, 1316, 1545, 1658
Bso31I	GGTCTC	1 cut(s)	2292
Bsp120I	GGGCCC	1 cut(s)	1543
Bsp1286I	GDGCHC	3 cut(s)	222, 1547, 1677
Bsp1407I	TGTACA	1 cut(s)	108
Bsp1720I	GCTNAGC	2 cut(s)	742, 917
BspACI	CCGC	9 cut(s)	251, 704, 1006, 1332, 1407, 1812, 1862, 1886, 2256
BspANI	GGCC	4 cut(s)	499, 1316, 1545, 1658
BspCNI	CTCAG	5 cut(s)	367, 909, 1189, 1691, 2241
BspFNI	CGCG	3 cut(s)	251, 1008, 1409
BspHI	TCATGA	1 cut(s)	1776
BspLI	GGNNCC	6 cut(s)	534, 769, 1203, 1544, 1545, 1659
BspMAI	CTGCAG	1 cut(s)	124
BspOI	GCTAGC	1 cut(s)	69
BspPI	GGATC	4 cut(s)	124, 466, 791, 832
BspTNI	GGTCTC	1 cut(s)	2292
BsrDI	GCAATG	3 cut(s)	930, 1630, 2308
BsrGI	TGTACA	1 cut(s)	108
BsrI	ACTGG	2 cut(s)	1466, 1885
BssT1I	CCWWGG	6 cut(s)	662, 759, 889, 1031, 2022, 2268
Bst2UI	CCWGG	6 cut(s)	297, 352, 774, 1540, 1593, 1896
Bst4CI	ACNGT	7 cut(s)	279, 1015, 1045, 1495, 1522, 1726, 1876
Bst6I	CTCTTC	3 cut(s)	50, 1316, 2254
BstAPI	GCANNNNNTGC	2 cut(s)	1178, 1400
BstAUI	TGTACA	1 cut(s)	108
BstC8I	GCNNGC	7 cut(s)	13, 67, 175, 562, 697, 1696, 2008
BstDEI	CTNAG	7 cut(s)	375, 742, 917, 1197, 1678, 2174, 2228
BstF5I	GGATG	8 cut(s)	587, 728, 877, 1363, 1429, 1535, 1891, 1961
BstFNI	CGCG	3 cut(s)	251, 1008, 1409
BstH2I	RGCGCY	1 cut(s)	1517
BstHHI	GCGC	2 cut(s)	1030, 1516
BstMAI	GTCTC	4 cut(s)	190, 1142, 1484, 2292
BstMCI	CGRYCG	1 cut(s)	2154
BstNI	CCWGG	6 cut(s)	297, 352, 774, 1540, 1593, 1896
BstNSI	RCATGY	5 cut(s)	564, 692, 1698, 1706, 2281
BstSCI	CCNGG	7 cut(s)	295, 350, 721, 772, 1538, 1591, 1894
BstSFI	CTRYAG	3 cut(s)	120, 147, 1821
BstSLI	GKGCMC	2 cut(s)	222, 1547
BstUI	CGCG	3 cut(s)	251, 1008, 1409
BstV1I	GCAGC	9 cut(s)	102, 134, 415, 733, 851, 1036, 1540, 1598, 1622
BstV2I	GAAGAC	1 cut(s)	2280
BstX2I	RGATCY	2 cut(s)	116, 458
BstXI	CCANNNNNNTGG	1 cut(s)	549
BstYI	RGATCY	2 cut(s)	116, 458
BsuI	GTATCC	1 cut(s)	2152
BsuRI	GGCC	4 cut(s)	499, 1316, 1545, 1658
BtgZI	GCGATG	1 cut(s)	1963
BtsCI	GGATG	8 cut(s)	587, 728, 877, 1363, 1429, 1535, 1891, 1961
BtsI	GCAGTG	2 cut(s)	928, 960
BtsIMutI	CAGTG	5 cut(s)	69, 865, 928, 960, 1160
Cac8I	GCNNGC	7 cut(s)	13, 67, 175, 562, 697, 1696, 2008
CaiI	CAGNNNCTG	5 cut(s)	1196, 1400, 1493, 1592, 1880
CciI	TCATGA	1 cut(s)	1776
CfoI	GCGC	2 cut(s)	1030, 1516
Cfr13I	GGNCC	7 cut(s)	533, 572, 998, 1543, 1544, 1657, 1883
CseI	GACGC	2 cut(s)	1202, 2167
Csp6I	GTAC	6 cut(s)	57, 109, 684, 719, 1156, 1283
CviQI	GTAC	6 cut(s)	57, 109, 684, 719, 1156, 1283
DdeI	CTNAG	7 cut(s)	375, 742, 917, 1197, 1678, 2174, 2228
DraI	TTTAAA	1 cut(s)	1419
EaeI	YGGCCR	1 cut(s)	497
Eam1104I	CTCTTC	3 cut(s)	50, 1316, 2254
EarI	CTCTTC	3 cut(s)	50, 1316, 2254
EciI	GGCGGA	1 cut(s)	1347
Eco130I	CCWWGG	6 cut(s)	662, 759, 889, 1031, 2022, 2268
Eco24I	GRGCYC	1 cut(s)	1547
Eco31I	GGTCTC	1 cut(s)	2292
Eco32I	GATATC	1 cut(s)	1435
Eco47I	GGWCC	4 cut(s)	533, 572, 998, 1883
Eco57I	CTGAAG	1 cut(s)	1533
EcoO109I	RGGNCCY	4 cut(s)	572, 1543, 1544, 1657
EcoRII	CCWGG	6 cut(s)	295, 350, 772, 1538, 1591, 1894
EcoRV	GATATC	1 cut(s)	1435
EcoT14I	CCWWGG	6 cut(s)	662, 759, 889, 1031, 2022, 2268
EcoT22I	ATGCAT	1 cut(s)	566
EcoT38I	GRGCYC	1 cut(s)	1547
ErhI	CCWWGG	6 cut(s)	662, 759, 889, 1031, 2022, 2268
Esp3I	CGTCTC	1 cut(s)	190
FaqI	GGGAC	2 cut(s)	871, 1696
FauI	CCCGC	1 cut(s)	1855
FauNDI	CATATG	2 cut(s)	1387, 2260
FbaI	TGATCA	5 cut(s)	73, 319, 1107, 1248, 1360
FokI	GGATG	8 cut(s)	574, 715, 884, 1370, 1436, 1522, 1878, 1948
FriOI	GRGCYC	1 cut(s)	1547
FspBI	CTAG	5 cut(s)	54, 66, 1134, 1983, 2166
GlaI	GCGC	2 cut(s)	1029, 1515
GsaI	CCCAGC	1 cut(s)	753
GsuI	CTGGAG	3 cut(s)	318, 616, 1124
HaeII	RGCGCY	1 cut(s)	1517
HaeIII	GGCC	4 cut(s)	499, 1316, 1545, 1658
HapII	CCGG	5 cut(s)	446, 500, 722, 911, 1066
HgaI	GACGC	2 cut(s)	1202, 2167
HhaI	GCGC	2 cut(s)	1030, 1516
Hin6I	GCGC	2 cut(s)	1028, 1514
HinP1I	GCGC	2 cut(s)	1028, 1514
HpaII	CCGG	5 cut(s)	446, 500, 722, 911, 1066
HphI	GGTGA	2 cut(s)	651, 2144
Hpy166II	GTNNAC	4 cut(s)	109, 220, 1156, 1600
Hpy188I	TCNGA	9 cut(s)	78, 265, 372, 412, 463, 508, 537, 1766, 2321
Hpy188III	TCNNGA	8 cut(s)	28, 195, 317, 1141, 1369, 1647, 1777, 2192
Hpy8I	GTNNAC	4 cut(s)	109, 220, 1156, 1600
HpyAV	CCTTC	4 cut(s)	547, 1112, 1557, 2101
HpyCH4III	ACNGT	7 cut(s)	279, 1015, 1045, 1495, 1522, 1726, 1876
HpyF3I	CTNAG	7 cut(s)	375, 742, 917, 1197, 1678, 2174, 2228
HspAI	GCGC	2 cut(s)	1028, 1514
Ksp22I	TGATCA	5 cut(s)	73, 319, 1107, 1248, 1360
Lsp1109I	GCAGC	9 cut(s)	102, 134, 415, 733, 851, 1036, 1540, 1598, 1622
LweI	GCATC	5 cut(s)	24, 414, 737, 841, 1414
MaeI	CTAG	5 cut(s)	54, 66, 1134, 1983, 2166
MaeIII	GTNAC	6 cut(s)	923, 1495, 1636, 1870, 1876, 2110
MboII	GAAGA	5 cut(s)	37, 1333, 1429, 2241, 2285
MflI	RGATCY	2 cut(s)	116, 458
MhlI	GDGCHC	3 cut(s)	222, 1547, 1677
MluCI	AATT	9 cut(s)	21, 831, 1126, 1308, 1344, 1664, 1801, 2064, 2072
MlyI	GAGTC	7 cut(s)	383, 443, 512, 1085, 1333, 1759, 2012
MmeI	TCCRAC	2 cut(s)	486, 2064
Mph1103I	ATGCAT	1 cut(s)	566
MseI	TTAA	5 cut(s)	137, 516, 608, 1350, 1418
MslI	CAYNNNNRTG	1 cut(s)	547
MspA1I	CMGCKG	3 cut(s)	594, 704, 1553
MspI	CCGG	5 cut(s)	446, 500, 722, 911, 1066
MspR9I	CCNGG	7 cut(s)	297, 352, 723, 774, 1540, 1593, 1896
Mva1269I	GAATGC	1 cut(s)	842
MvaI	CCWGG	6 cut(s)	297, 352, 774, 1540, 1593, 1896
MvnI	CGCG	3 cut(s)	251, 1008, 1409
NciI	CCSGG	1 cut(s)	723
NdeI	CATATG	2 cut(s)	1387, 2260
NheI	GCTAGC	1 cut(s)	65
NlaIV	GGNNCC	6 cut(s)	534, 769, 1203, 1544, 1545, 1659
NmeAIII	GCCGAG	3 cut(s)	119, 235, 962
NmuCI	GTSAC	2 cut(s)	923, 1495
NsiI	ATGCAT	1 cut(s)	566
NspI	RCATGY	5 cut(s)	564, 692, 1698, 1706, 2281
PaeI	GCATGC	2 cut(s)	564, 1698
PagI	TCATGA	1 cut(s)	1776
PciI	ACATGT	2 cut(s)	1702, 2277
PctI	GAATGC	1 cut(s)	842
PfeI	GAWTC	5 cut(s)	246, 538, 656, 1826, 2188
PflMI	CCANNNNNTGG	1 cut(s)	955
Ple19I	CGATCG	1 cut(s)	2154
PleI	GAGTC	7 cut(s)	383, 443, 511, 1084, 1332, 1758, 2012
PpsI	GAGTC	7 cut(s)	383, 443, 511, 1084, 1332, 1758, 2012
PpuMI	RGGWCCY	1 cut(s)	572
PscI	ACATGT	2 cut(s)	1702, 2277
Psp5II	RGGWCCY	1 cut(s)	572
Psp6I	CCWGG	6 cut(s)	295, 350, 772, 1538, 1591, 1894
PspFI	CCCAGC	1 cut(s)	749
PspGI	CCWGG	6 cut(s)	295, 350, 772, 1538, 1591, 1894
PspN4I	GGNNCC	6 cut(s)	534, 769, 1203, 1544, 1545, 1659
PspOMI	GGGCCC	1 cut(s)	1543
PspPI	GGNCC	7 cut(s)	533, 572, 998, 1543, 1544, 1657, 1883
PspPPI	RGGWCCY	1 cut(s)	572
PstI	CTGCAG	1 cut(s)	124
PstNI	CAGNNNCTG	5 cut(s)	1196, 1400, 1493, 1592, 1880
PsuI	RGATCY	2 cut(s)	116, 458
PvuI	CGATCG	1 cut(s)	2154
PvuII	CAGCTG	2 cut(s)	594, 1553
RsaI	GTAC	6 cut(s)	58, 110, 685, 720, 1157, 1284
RsaNI	GTAC	6 cut(s)	57, 109, 684, 719, 1156, 1283
RseI	CAYNNNNRTG	1 cut(s)	547
SaqAI	TTAA	5 cut(s)	137, 516, 608, 1350, 1418
Sau96I	GGNCC	7 cut(s)	533, 572, 998, 1543, 1544, 1657, 1883
ScaI	AGTACT	1 cut(s)	58
SchI	GAGTC	7 cut(s)	383, 443, 512, 1085, 1333, 1759, 2012
ScrFI	CCNGG	7 cut(s)	297, 352, 723, 774, 1540, 1593, 1896
SduI	GDGCHC	3 cut(s)	222, 1547, 1677
SfaNI	GCATC	5 cut(s)	24, 414, 737, 841, 1414
SfcI	CTRYAG	3 cut(s)	120, 147, 1821
SinI	GGWCC	4 cut(s)	533, 572, 998, 1883
SmiMI	CAYNNNNRTG	1 cut(s)	547
SmlI	CTYRAG	3 cut(s)	157, 362, 1571
SmoI	CTYRAG	3 cut(s)	157, 362, 1571
SpeI	ACTAGT	1 cut(s)	53
SphI	GCATGC	2 cut(s)	564, 1698
Sse9I	AATT	9 cut(s)	21, 831, 1126, 1308, 1344, 1664, 1801, 2064, 2072
SsiI	CCGC	9 cut(s)	251, 704, 1006, 1332, 1407, 1812, 1862, 1886, 2256
SspMI	CTAG	5 cut(s)	54, 66, 1134, 1983, 2166
StyD4I	CCNGG	7 cut(s)	295, 350, 721, 772, 1538, 1591, 1894
StyI	CCWWGG	6 cut(s)	662, 759, 889, 1031, 2022, 2268
TaaI	ACNGT	7 cut(s)	279, 1015, 1045, 1495, 1522, 1726, 1876
TaqI	TCGA	5 cut(s)	194, 281, 387, 846, 1792
TaqII	GACCGA	1 cut(s)	1015
TasI	AATT	9 cut(s)	21, 831, 1126, 1308, 1344, 1664, 1801, 2064, 2072
TatI	WGTACW	2 cut(s)	56, 108
TauI	GCSGC	2 cut(s)	254, 707
TfiI	GAWTC	5 cut(s)	246, 538, 656, 1826, 2188
Tru1I	TTAA	5 cut(s)	137, 516, 608, 1350, 1418
Tru9I	TTAA	5 cut(s)	137, 516, 608, 1350, 1418
TscAI	CASTG	5 cut(s)	76, 865, 928, 960, 1167
TseFI	GTSAC	2 cut(s)	923, 1495
TseI	GCWGC	9 cut(s)	90, 122, 428, 746, 839, 1049, 1553, 1586, 1610
Tsp45I	GTSAC	2 cut(s)	923, 1495
TspDTI	ATGAA	5 cut(s)	576, 581, 1221, 1524, 1923
TspGWI	ACGGA	1 cut(s)	214
TspRI	CASTG	5 cut(s)	76, 865, 928, 960, 1167
Van91I	CCANNNNNTGG	1 cut(s)	955
VneI	GTGCAC	1 cut(s)	218
VpaK11BI	GGWCC	4 cut(s)	533, 572, 998, 1883
XapI	RAATTY	3 cut(s)	1126, 1664, 2072
XceI	RCATGY	5 cut(s)	564, 692, 1698, 1706, 2281
XspI	CTAG	5 cut(s)	54, 66, 1134, 1983, 2166
ZrmI	AGTACT	1 cut(s)	58
Zsp2I	ATGCAT	1 cut(s)	566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.