Rmu_ssc0000126.1_g000046

Ankyrin repeat domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000126.1
Physical Location & Seq
Forward (+)
204762 .. 209298
4537 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000126.1_g000046.1.cds

Sequence Viewer

Length: 1203 bp
atgacacttgtcttttactccttggggtttgaagacagttcagaacagttctctatctgcttcgtcttcttcacaatcgaatcaggatcaggcgatactatggcttccgcgcagaaggattcgcctgctgatgcaaagacggttcccaaagaggagaaaacttccaaatctgaaacatcttctggggagtcacaggcaccacaagcagcaccaggagggttcccgtttccagcaggagcaggaggggggatgccttttccattccctgaagctggaggtgcaggtcccaatccttttgatttctctgccatgaccggcttgcttaatgatccaagtatcaaggaactagctgaacagatagcaaaagatccttcattcaaccagatggcagagcaacttcagaaaacttttcaaggtgcaccagttgacgaaggtgtccctcagtttgatagtcaacagtactattccaccatgcaacaggttatgcagaatcctcagtttatgaccatggctgagcgcctcggtaatgcattgatgcaggatccatccatgaatacaatgcttgagagtatcgcaaatccatcaaacaaagatcagctggaggagcgtatggcacgcatcaaagatgatccttctttgaagcctattttagaagagatagagactgggggtcctgctgccatgatgagatactggaatgataaagacgtgttgcagaagttgggagaagcaatgggtcttccagttgggactgatggatccccttctgaagtttcaggagaaaagccctggtcaccagaggaagcagaagatgctggagctgaggatgaacccattgttcatcacactgccagtgttggtgatgtggagggtttgaaaaatgcgctttctactggtgctgacaaagatgaggaagattccgaaggaaggacagcattgcattttgcttgcggatatggcgaggcgaagtgtgctcaggtgcttctagaggctggagcaaaagtggatgccttagataagaataaaaacactgcgcttcattatgcagccggttatggcaggaaggaatgtgtggcccttctattggaaaatggcgcagctgtcacactcgcaaacatggatggaaagaccccgattgacgttgccaagctgaacaaccaaaatgatgtacttaagttgctcgagaaggatgccttcctctag

Protein Analysis

400

Amino Acids

42.76

Weight (kDa)

4.36

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 434
Acc36I ACCTGC 1 cut(s) 272
AccB1I GGYRCC 1 cut(s) 196
AccII CGCG 1 cut(s) 110
AciI CCGC 2 cut(s) 108, 951
AclWI GGATC 8 cut(s) 94, 323, 362, 536, 549, 623, 753, 766
AcuI CTGAAG 3 cut(s) 288, 383, 789
AfaI GTAC 2 cut(s) 461, 1170
AfiI CCNNNNNNNGG 3 cut(s) 272, 927, 1084
AflII CTTAAG 1 cut(s) 1172
AflIII ACRYGT 1 cut(s) 708
AgsI TTSAA 5 cut(s) 32, 379, 413, 640, 877
AhdI GACNNNNNGTC 1 cut(s) 669
AjiI CACGTC 1 cut(s) 709
AjnI CCWGG 2 cut(s) 211, 788
AluBI AGCT 6 cut(s) 272, 350, 598, 821, 1100, 1150
AluI AGCT 6 cut(s) 272, 350, 598, 821, 1100, 1150
Alw21I GWGCWC 2 cut(s) 421, 976
Alw26I GTCTC 1 cut(s) 656
Alw44I GTGCAC 1 cut(s) 417
AlwI GGATC 8 cut(s) 94, 323, 362, 536, 549, 623, 753, 766
Ama87I CYCGRG 1 cut(s) 1181
AoxI GGCC 1 cut(s) 1074
ApaLI GTGCAC 1 cut(s) 417
ApeKI GCWGC 4 cut(s) 206, 677, 1046, 1097
AspLEI GCGC 5 cut(s) 112, 519, 886, 1036, 1097
AspS9I GGNCC 3 cut(s) 284, 671, 1075
AsuHPI GGTGA 2 cut(s) 786, 872
AvaI CYCGRG 1 cut(s) 1181
AvaII GGWCC 2 cut(s) 284, 671
BaeGI GKGCMC 1 cut(s) 421
BamHI GGATCC 2 cut(s) 541, 758
BanI GGYRCC 1 cut(s) 196
BbsI GAAGAC 3 cut(s) 39, 58, 731
Bbv12I GWGCWC 2 cut(s) 421, 976
BbvCI CCTCAGC 1 cut(s) 822
BbvI GCAGC 4 cut(s) 218, 664, 1058, 1109
BccI CCATC 5 cut(s) 379, 553, 589, 749, 1115
BcgI CGANNNNNNTGC 1 cut(s) 1172
BciT130I CCWGG 2 cut(s) 213, 790
BcoDI GTCTC 1 cut(s) 656
BfaI CTAG 3 cut(s) 347, 986, 1201
BfoI RGCGCY 1 cut(s) 520
BfrI CTTAAG 1 cut(s) 1172
BfuAI ACCTGC 1 cut(s) 272
BisI GCNGC 4 cut(s) 207, 678, 1047, 1098
BlpI GCTNAGC 1 cut(s) 513
BlsI GCNGC 4 cut(s) 208, 679, 1048, 1099
BmcAI AGTACT 1 cut(s) 461
Bme1390I CCNGG 2 cut(s) 213, 790
Bme18I GGWCC 2 cut(s) 284, 671
BmeRI GACNNNNNGTC 1 cut(s) 669
BmeT110I CYCGRG 1 cut(s) 1181
BmgBI CACGTC 1 cut(s) 709
BmgT120I GGNCC 3 cut(s) 284, 671, 1075
BmiI GGNNCC 7 cut(s) 144, 198, 221, 286, 543, 672, 760
BmrFI CCNGG 2 cut(s) 213, 790
BmrI ACTGGG 1 cut(s) 675
BmsI GCATC 7 cut(s) 121, 240, 525, 627, 802, 997, 1180
BmuI ACTGGG 1 cut(s) 675
BoxI GACNNNNGTC 1 cut(s) 8
BpiI GAAGAC 3 cut(s) 39, 58, 731
BpmI CTGGAG 4 cut(s) 294, 620, 837, 1014
Bpu10I CCTNAGC 2 cut(s) 822, 975
Bpu1102I GCTNAGC 1 cut(s) 513
BpuEI CTTGAG 1 cut(s) 584
BsaJI CCNNGG 4 cut(s) 21, 507, 520, 788
BsaXI ACNNNNNCTCC 2 cut(s) 987, 1017
Bsc4I CCNNNNNNNGG 3 cut(s) 272, 927, 1084
Bse118I RCCGGY 2 cut(s) 314, 1049
Bse1I ACTGG 6 cut(s) 422, 670, 698, 743, 852, 898
Bse3DI GCAATG 2 cut(s) 738, 935
BseBI CCWGG 2 cut(s) 213, 790
BseDI CCNNGG 4 cut(s) 21, 507, 520, 788
BseGI GGATG 6 cut(s) 255, 545, 832, 1012, 1126, 1195
BseLI CCNNNNNNNGG 3 cut(s) 272, 927, 1084
BseMI GCAATG 2 cut(s) 738, 935
BseMII CTCAG 5 cut(s) 455, 504, 509, 813, 989
BseNI ACTGG 6 cut(s) 422, 670, 698, 743, 852, 898
BseRI GAGGAG 2 cut(s) 167, 617
BseSI GKGCMC 1 cut(s) 421
BseXI GCAGC 4 cut(s) 218, 664, 1058, 1109
BsgI GTGCAG 1 cut(s) 300
Bsh1236I CGCG 1 cut(s) 110
BshFI GGCC 1 cut(s) 1076
BshNI GGYRCC 1 cut(s) 196
BsiHKAI GWGCWC 2 cut(s) 421, 976
BsiHKCI CYCGRG 1 cut(s) 1181
BsiSI CCGG 2 cut(s) 315, 1050
BslFI GGGAC 3 cut(s) 270, 422, 763
BslI CCNNNNNNNGG 3 cut(s) 272, 927, 1084
BsmAI GTCTC 1 cut(s) 656
BsmFI GGGAC 3 cut(s) 270, 422, 763
BsnI GGCC 1 cut(s) 1076
BsoBI CYCGRG 1 cut(s) 1181
Bsp1286I GDGCHC 2 cut(s) 421, 976
Bsp143I GATC 7 cut(s) 86, 328, 367, 541, 592, 628, 758
Bsp1720I GCTNAGC 1 cut(s) 513
Bsp19I CCATGG 1 cut(s) 507
BspACI CCGC 2 cut(s) 108, 951
BspANI GGCC 1 cut(s) 1076
BspCNI CTCAG 5 cut(s) 454, 505, 508, 814, 988
BspFNI CGCG 1 cut(s) 110
BspLI GGNNCC 7 cut(s) 144, 198, 221, 286, 543, 672, 760
BspMI ACCTGC 1 cut(s) 272
BspPI GGATC 8 cut(s) 94, 323, 362, 536, 549, 623, 753, 766
BspT107I GGYRCC 1 cut(s) 196
BspTI CTTAAG 1 cut(s) 1172
BsrDI GCAATG 2 cut(s) 738, 935
BsrFI RCCGGY 2 cut(s) 314, 1049
BsrI ACTGG 6 cut(s) 422, 670, 698, 743, 852, 898
BssAI RCCGGY 2 cut(s) 314, 1049
BssECI CCNNGG 4 cut(s) 21, 507, 520, 788
BssMI GATC 7 cut(s) 86, 328, 367, 541, 592, 628, 758
BssT1I CCWWGG 2 cut(s) 21, 507
Bst2UI CCWGG 2 cut(s) 213, 790
Bst4CI ACNGT 4 cut(s) 38, 48, 142, 459
Bst6I CTCTTC 1 cut(s) 648
BstAFI CTTAAG 1 cut(s) 1172
BstAPI GCANNNNNTGC 1 cut(s) 812
BstC8I GCNNGC 4 cut(s) 126, 320, 616, 949
BstDEI CTNAG 6 cut(s) 441, 495, 513, 822, 975, 1012
BstDSI CCRYGG 1 cut(s) 507
BstEII GGTNACC 1 cut(s) 792
BstF5I GGATG 6 cut(s) 255, 545, 832, 1012, 1126, 1195
BstFNI CGCG 1 cut(s) 110
BstH2I RGCGCY 1 cut(s) 520
BstHHI GCGC 5 cut(s) 112, 519, 886, 1036, 1097
BstKTI GATC 7 cut(s) 89, 331, 370, 544, 595, 631, 761
BstMAI GTCTC 1 cut(s) 656
BstMBI GATC 7 cut(s) 86, 328, 367, 541, 592, 628, 758
BstMWI GCNNNNNNNGC 6 cut(s) 203, 278, 604, 812, 957, 971
BstNI CCWGG 2 cut(s) 213, 790
BstPAI GACNNNNGTC 1 cut(s) 8
BstPI GGTNACC 1 cut(s) 792
BstSCI CCNGG 2 cut(s) 211, 788
BstSLI GKGCMC 1 cut(s) 421
BstUI CGCG 1 cut(s) 110
BstV1I GCAGC 4 cut(s) 218, 664, 1058, 1109
BstV2I GAAGAC 3 cut(s) 39, 58, 731
BstX2I RGATCY 3 cut(s) 367, 541, 758
BstYI RGATCY 3 cut(s) 367, 541, 758
BsuRI GGCC 1 cut(s) 1076
BtgI CCRYGG 1 cut(s) 507
BtrI CACGTC 1 cut(s) 709
BtsCI GGATG 6 cut(s) 255, 545, 832, 1012, 1126, 1195
BtsI GCAGTG 2 cut(s) 846, 1029
BtsIMutI CAGTG 3 cut(s) 846, 859, 1029
BveI ACCTGC 1 cut(s) 272
Cac8I GCNNGC 4 cut(s) 126, 320, 616, 949
CfoI GCGC 5 cut(s) 112, 519, 886, 1036, 1097
Cfr10I RCCGGY 2 cut(s) 314, 1049
Cfr13I GGNCC 3 cut(s) 284, 671, 1075
Csp6I GTAC 2 cut(s) 460, 1169
CviAII CATG 6 cut(s) 310, 472, 508, 550, 682, 1117
CviQI GTAC 2 cut(s) 460, 1169
DdeI CTNAG 6 cut(s) 441, 495, 513, 822, 975, 1012
DpnI GATC 7 cut(s) 88, 330, 369, 543, 594, 630, 760
DpnII GATC 7 cut(s) 86, 328, 367, 541, 592, 628, 758
DrdI GACNNNNNNGTC 1 cut(s) 434
DriI GACNNNNNGTC 1 cut(s) 669
DseDI GACNNNNNNGTC 1 cut(s) 434
Eam1104I CTCTTC 1 cut(s) 648
Eam1105I GACNNNNNGTC 1 cut(s) 669
EarI CTCTTC 1 cut(s) 648
Eco130I CCWWGG 2 cut(s) 21, 507
Eco47I GGWCC 2 cut(s) 284, 671
Eco57I CTGAAG 3 cut(s) 288, 383, 789
Eco88I CYCGRG 1 cut(s) 1181
Eco91I GGTNACC 1 cut(s) 792
EcoO109I RGGNCCY 2 cut(s) 284, 671
EcoO65I GGTNACC 1 cut(s) 792
EcoRII CCWGG 2 cut(s) 211, 788
EcoT14I CCWWGG 2 cut(s) 21, 507
EcoT22I ATGCAT 1 cut(s) 532
ErhI CCWWGG 2 cut(s) 21, 507
FaeI CATG 6 cut(s) 313, 475, 511, 553, 685, 1120
FalI AAGNNNNNCTT 1 cut(s) 1178
FaqI GGGAC 3 cut(s) 270, 422, 763
FatI CATG 6 cut(s) 309, 471, 507, 549, 681, 1116
Fnu4HI GCNGC 4 cut(s) 207, 678, 1047, 1098
FokI GGATG 5 cut(s) 262, 532, 839, 1019, 1133
Fsp4HI GCNGC 4 cut(s) 207, 678, 1047, 1098
FspBI CTAG 3 cut(s) 347, 986, 1201
GlaI GCGC 5 cut(s) 111, 518, 885, 1035, 1096
GluI GCNGC 4 cut(s) 207, 678, 1047, 1098
GsuI CTGGAG 4 cut(s) 294, 620, 837, 1014
HaeII RGCGCY 1 cut(s) 520
HaeIII GGCC 1 cut(s) 1076
HapII CCGG 2 cut(s) 315, 1050
HhaI GCGC 5 cut(s) 112, 519, 886, 1036, 1097
Hin1II CATG 6 cut(s) 313, 475, 511, 553, 685, 1120
Hin6I GCGC 5 cut(s) 110, 517, 884, 1034, 1095
HinP1I GCGC 5 cut(s) 110, 517, 884, 1034, 1095
HincII GTYRAC 2 cut(s) 427, 455
HindII GTYRAC 2 cut(s) 427, 455
HinfI GANTC 5 cut(s) 80, 119, 188, 490, 917
HpaII CCGG 2 cut(s) 315, 1050
HphI GGTGA 2 cut(s) 786, 872
Hpy166II GTNNAC 3 cut(s) 419, 427, 455
Hpy188I TCNGA 5 cut(s) 43, 172, 402, 769, 922
Hpy188III TCNNGA 4 cut(s) 84, 777, 986, 1183
Hpy8I GTNNAC 3 cut(s) 419, 427, 455
HpyCH4III ACNGT 4 cut(s) 38, 48, 142, 459
HpyCH4IV ACGT 2 cut(s) 708, 1140
HpyF10VI GCNNNNNNNGC 6 cut(s) 203, 278, 604, 812, 957, 971
HpyF3I CTNAG 6 cut(s) 441, 495, 513, 822, 975, 1012
HpySE526I ACGT 2 cut(s) 708, 1140
Hsp92II CATG 6 cut(s) 313, 475, 511, 553, 685, 1120
HspAI GCGC 5 cut(s) 110, 517, 884, 1034, 1095
Kzo9I GATC 7 cut(s) 86, 328, 367, 541, 592, 628, 758
LmnI GCTCC 4 cut(s) 236, 604, 818, 995
Lsp1109I GCAGC 4 cut(s) 218, 664, 1058, 1109
LweI GCATC 7 cut(s) 121, 240, 525, 627, 802, 997, 1180
MaeI CTAG 3 cut(s) 347, 986, 1201
MaeII ACGT 2 cut(s) 708, 1140
MaeIII GTNAC 3 cut(s) 189, 792, 1102
MalI GATC 7 cut(s) 88, 330, 369, 543, 594, 630, 760
MboI GATC 7 cut(s) 86, 328, 367, 541, 592, 628, 758
MboII GAAGA 8 cut(s) 44, 58, 61, 171, 665, 731, 821, 926
MflI RGATCY 3 cut(s) 367, 541, 758
MhlI GDGCHC 2 cut(s) 421, 976
MlyI GAGTC 1 cut(s) 197
Mph1103I ATGCAT 1 cut(s) 532
MseI TTAA 2 cut(s) 324, 1173
MspA1I CMGCKG 2 cut(s) 598, 1100
MspCI CTTAAG 1 cut(s) 1172
MspI CCGG 2 cut(s) 315, 1050
MspR9I CCNGG 2 cut(s) 213, 790
MvaI CCWGG 2 cut(s) 213, 790
MvnI CGCG 1 cut(s) 110
MwoI GCNNNNNNNGC 6 cut(s) 203, 278, 604, 812, 957, 971
NcoI CCATGG 1 cut(s) 507
NdeII GATC 7 cut(s) 86, 328, 367, 541, 592, 628, 758
NlaIII CATG 6 cut(s) 313, 475, 511, 553, 685, 1120
NlaIV GGNNCC 7 cut(s) 144, 198, 221, 286, 543, 672, 760
NmuCI GTSAC 3 cut(s) 189, 792, 1102
NsiI ATGCAT 1 cut(s) 532
PaeR7I CTCGAG 1 cut(s) 1181
PfeI GAWTC 4 cut(s) 80, 119, 490, 917
PkrI GCNGC 4 cut(s) 208, 679, 1048, 1099
PleI GAGTC 1 cut(s) 196
PpsI GAGTC 1 cut(s) 196
PpuMI RGGWCCY 2 cut(s) 284, 671
PshAI GACNNNNGTC 1 cut(s) 8
Psp5II RGGWCCY 2 cut(s) 284, 671
Psp6I CCWGG 2 cut(s) 211, 788
PspEI GGTNACC 1 cut(s) 792
PspGI CCWGG 2 cut(s) 211, 788
PspN4I GGNNCC 7 cut(s) 144, 198, 221, 286, 543, 672, 760
PspPI GGNCC 3 cut(s) 284, 671, 1075
PspPPI RGGWCCY 2 cut(s) 284, 671
PsuI RGATCY 3 cut(s) 367, 541, 758
PvuII CAGCTG 2 cut(s) 598, 1100
RsaI GTAC 2 cut(s) 461, 1170
RsaNI GTAC 2 cut(s) 460, 1169
SaqAI TTAA 2 cut(s) 324, 1173
SatI GCNGC 4 cut(s) 207, 678, 1047, 1098
Sau3AI GATC 7 cut(s) 86, 328, 367, 541, 592, 628, 758
Sau96I GGNCC 3 cut(s) 284, 671, 1075
ScaI AGTACT 1 cut(s) 461
SchI GAGTC 1 cut(s) 197
ScrFI CCNGG 2 cut(s) 213, 790
SduI GDGCHC 2 cut(s) 421, 976
SfaNI GCATC 7 cut(s) 121, 240, 525, 627, 802, 997, 1180
Sfr274I CTCGAG 1 cut(s) 1181
SinI GGWCC 2 cut(s) 284, 671
SlaI CTCGAG 1 cut(s) 1181
SmlI CTYRAG 3 cut(s) 563, 1172, 1181
SmoI CTYRAG 3 cut(s) 563, 1172, 1181
SsiI CCGC 2 cut(s) 108, 951
SspMI CTAG 3 cut(s) 347, 986, 1201
StyD4I CCNGG 2 cut(s) 211, 788
StyI CCWWGG 2 cut(s) 21, 507
TaaI ACNGT 4 cut(s) 38, 48, 142, 459
TaiI ACGT 2 cut(s) 711, 1143
TaqI TCGA 2 cut(s) 78, 1182
TatI WGTACW 2 cut(s) 459, 1168
TfiI GAWTC 4 cut(s) 80, 119, 490, 917
Tru1I TTAA 2 cut(s) 324, 1173
Tru9I TTAA 2 cut(s) 324, 1173
TscAI CASTG 3 cut(s) 853, 859, 1036
TseFI GTSAC 3 cut(s) 189, 792, 1102
TseI GCWGC 4 cut(s) 206, 677, 1046, 1097
Tsp45I GTSAC 3 cut(s) 189, 792, 1102
TspDTI ATGAA 5 cut(s) 363, 566, 830, 843, 1028
TspRI CASTG 3 cut(s) 853, 859, 1036
Vha464I CTTAAG 1 cut(s) 1172
VneI GTGCAC 1 cut(s) 417
VpaK11BI GGWCC 2 cut(s) 284, 671
XbaI TCTAGA 1 cut(s) 985
XhoI CTCGAG 1 cut(s) 1181
XspI CTAG 3 cut(s) 347, 986, 1201
ZrmI AGTACT 1 cut(s) 461
Zsp2I ATGCAT 1 cut(s) 532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.