Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000355.1

Orthogroup ID

OG0012416

Physical Location & Seq

Genomic Coordinates Reverse (-)

13533 .. 19754

Gene Structure 6222 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

atggcggatctgtacggaacgccgccggactcggaagaaatctccaacattctcagccacctcctccacggcggctcctcctcctcttcctgcggggcgcccttcaagcccgccacttacatgcacctactcaactcctcctcctcctcagtgccgccgccgccgcctcacgagcatcctcaattgttggcccgatcggcggaccggcccgactccgaccggccctctgacttcaacttctccgattccggcggcgggtatttcatggactccgacgccaacacttcaaagaagggggggaggagagtttcgtcggagaatgatcttggtgacgtcagctgtgacagtgagggtcctgaagcgccggaggttccattaaacgccgctccgccgcgtagtttgtccaagagaagcagagcggcggaggtccataacttgtcggaaaagagaaggaggagtaagattaatgagaaaatgaaagctttgcagaacctgattccaaattctaacaagacggataaggcttcgatgctggatgaagcaattgagtatttgaagcagctccagcttcaagtacagatgttaacgatgagaaatggactgggtttgcatcccatgtgcttaccaggaatgatgcagcctgtgcagttgcctcatatggcattgggctttgacgaaggaagtaacaaagttccaaagtctagcagaggaatgagcccattttttggtagtgaagaaaactcaatgcaatcagcttataatatttccagtggatgcacaatcttgaatcagccaatggtcgtaccctcagctgcaaatgtccctactttggaagcctcatttgtttttgaaccatcgactcaagcttactacagacccttctttgctgccacatcttctaaggaactattattctgtgaaggtgagccgtcctcaaaatcagattccaatcggactgggataaactcttcatcagatgctgataaggtgtcctcaaagagacctgatcagacaatacccatcagagagcttgaggatgctactaatgggtttgctgatgagaatgtgattggcgaaggtggatatgggattgtgtacagaggtgttttggaggacaactcaatggttgcagtcaagaatttgctcaataacaaaggtgttttggaggacaactcaatggttgcagtcaagaatttgctcaataacaagggacaagctgagaaggagttcaaggttgaagttgaagcaattggtcgtgttcgccataagaatttagtgaggttgcttggctactgtgctgaaggtgctcacaggatgcttgtgtatgagtatgttgacaacggaaacctggaacaatggcttcatggagatgtcgggcctctcagccctctgacatgggagaatcgcatgaatataatacttgggacagcgaaagggttgacatacttgcatgagggactagagcccaaggttgttcaccgtgatattaagtccagcaacatcttgcttgataagcagtggaattctaaagtatctgactttggcttagcaaagctcctgggctcagaaaggagttatgtgacaactcgtgtgatgggaacatttggatatgtagctccagaatatgctagtactggcatgttgaatgaaagaagtgatgtttatagttttgggattctcataatggagattatttcggggagaaacccagtagactatagcaggcctgcaggagaggtgaacctagttgaatggcttaaaacaatggttaccaatcggaccgccgagggagttttagatcctagattgccagagaagccttcttccagggcattgaagcgtgctcttctggttgccttacgttgtgtggacccgaatgctcagaagaggccaaaaatggggcatgtggtgcatatgcttgaagctgatgagttccctttccgagatgaccgcaggcctggaagagaatatggacgctcaccgcgtgatgctgcaaagcgtgttatggaatcaggtgatagtagcgggtatgacagtggtgcccaaactaacatgtcagcatggagaaagcaagaagttgaagaagagcgttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

697

Amino Acids

76.77

Weight (kDa)

6.01

Isoelectric Point (pI)

55.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	142 - 189	1.2e-13	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	148 - 193	1.2e-07	Transcription factor SAC51 bHLH domain
Pkinase	PF00069	352 - 638	5.9e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	355 - 640	1.6e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012416)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67110 AT5G67110 AT5G67110
fragaria_vesca	FvH4_2g34100
malus_domestica	MD15G1079800.v1.1
prunus_persica	Prupe.1G432800_v2.0.a1
pyrus_communis	pycom08g07960 pycom15g07430
rosa_chinensis	RchiOBHm_Chr6g0308251
rosa_laevigata	RLG00000010654
rosa_multiflora	Rmu_sc0012549.1_g000001 Rmu_ssc0000355.1_g000007
rosa_roxburghii	Rroxscaffold_7G00160320
rosa_rugosa	Rorug06G0365400
rosa_samantha	Rh6AG474400 Rh6BG485100 Rh6CG490100 Rh6DG476500
rosa_wichuraiana	Rw6G041380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	759
AatII	GACGTC	1 cut(s)	336
AccB1I	GGYRCC	2 cut(s)	97, 2039
AccB7I	CCANNNNNTGG	1 cut(s)	725
AccBSI	CCGCTC	2 cut(s)	386, 419
AccI	GTMKAC	1 cut(s)	1713
AccII	CGCG	2 cut(s)	394, 1984
AclWI	GGATC	2 cut(s)	15, 1793
AcsI	RAATTY	5 cut(s)	502, 1138, 1192, 1270, 1522
AcuI	CTGAAG	2 cut(s)	378, 1320
AcyI	GRCGYC	3 cut(s)	98, 276, 333
AdeI	CACNNNGTG	1 cut(s)	1985
AfaI	GTAC	5 cut(s)	14, 576, 804, 1097, 1633
AfiI	CCNNNNNNNGG	5 cut(s)	199, 255, 725, 829, 1898
AflIII	ACRYGT	1 cut(s)	2052
AjnI	CCWGG	5 cut(s)	625, 1347, 1557, 1826, 1957
Alw21I	GWGCWC	2 cut(s)	1309, 1846
Alw26I	GTCTC	1 cut(s)	994
AlwI	GGATC	2 cut(s)	15, 1793
AlwNI	CAGNNNCTG	2 cut(s)	493, 980
AoxI	GGCC	7 cut(s)	189, 206, 221, 1376, 1724, 1889, 1955
ApeKI	GCWGC	5 cut(s)	559, 637, 812, 887, 1991
ApoI	RAATTY	5 cut(s)	502, 1138, 1192, 1270, 1522
AseI	ATTAAT	1 cut(s)	465
Asp700I	GAANNNNTTC	1 cut(s)	1226
AspLEI	GCGC	2 cut(s)	100, 364
AspS9I	GGNCC	9 cut(s)	190, 202, 207, 222, 353, 427, 1376, 1779, 1870
AsuHPI	GGTGA	6 cut(s)	341, 935, 1469, 1750, 1971, 2027
AvaII	GGWCC	5 cut(s)	202, 353, 427, 1779, 1870
BaeGI	GKGCMC	1 cut(s)	2044
BanI	GGYRCC	2 cut(s)	97, 2039
BanII	GRGCYC	3 cut(s)	719, 1467, 1565
BauI	CACGAG	2 cut(s)	170, 1587
Bbv12I	GWGCWC	2 cut(s)	1309, 1846
BbvCI	CCTCAGC	1 cut(s)	808
BbvI	GCAGC	5 cut(s)	571, 649, 799, 874, 1978
BccI	CCATC	3 cut(s)	862, 1028, 1588
BceAI	ACGGC	2 cut(s)	85, 913
BciT130I	CCWGG	5 cut(s)	627, 1349, 1559, 1828, 1959
BclI	TGATCA	1 cut(s)	1006
BcoDI	GTCTC	1 cut(s)	994
BfaI	CTAG	5 cut(s)	702, 1460, 1629, 1745, 1803
BfmI	CTRYAG	3 cut(s)	871, 1717, 1728
BfoI	RGCGCY	2 cut(s)	101, 365
BglI	GCCNNNNNGGC	1 cut(s)	197
BlpI	GCTNAGC	1 cut(s)	1546
BmcAI	AGTACT	1 cut(s)	1633
Bme1390I	CCNGG	5 cut(s)	627, 1349, 1559, 1828, 1959
Bme18I	GGWCC	5 cut(s)	202, 353, 427, 1779, 1870
BmgT120I	GGNCC	9 cut(s)	190, 202, 207, 222, 353, 427, 1376, 1779, 1870
BmiI	GGNNCC	6 cut(s)	76, 99, 354, 372, 1872, 2041
BmrFI	CCNGG	5 cut(s)	627, 1349, 1559, 1828, 1959
BmrI	ACTGGG	3 cut(s)	611, 966, 1703
BmsI	GCATC	9 cut(s)	184, 519, 619, 624, 764, 967, 1027, 1305, 1978
BmuI	ACTGGG	3 cut(s)	611, 966, 1703
BplI	GAGNNNNNCTC	6 cut(s)	917, 949, 1103, 1135, 1157, 1189
BpmI	CTGGAG	2 cut(s)	548, 1602
Bpu10I	CCTNAGC	1 cut(s)	808
Bpu1102I	GCTNAGC	1 cut(s)	1546
BpuEI	CTTGAG	2 cut(s)	846, 1052
BsaBI	GATNNNNATC	1 cut(s)	948
BsaHI	GRCGYC	3 cut(s)	98, 276, 333
BsaI	GGTCTC	1 cut(s)	994
BsaJI	CCNNGG	5 cut(s)	67, 1467, 1558, 1785, 1827
BsaXI	ACNNNNNCTCC	4 cut(s)	59, 89, 125, 155
Bsc4I	CCNNNNNNNGG	5 cut(s)	199, 255, 725, 829, 1898
Bse118I	RCCGGY	2 cut(s)	204, 219
Bse1I	ACTGG	5 cut(s)	606, 768, 961, 1639, 1709
Bse8I	GATNNNNATC	1 cut(s)	948
BseBI	CCWGG	5 cut(s)	627, 1349, 1559, 1828, 1959
BseDI	CCNNGG	5 cut(s)	67, 1467, 1558, 1785, 1827
BseGI	GGATG	6 cut(s)	175, 541, 610, 779, 1042, 1320
BseJI	GATNNNNATC	1 cut(s)	948
BseLI	CCNNNNNNNGG	5 cut(s)	199, 255, 725, 829, 1898
BseMII	CTCAG	7 cut(s)	67, 162, 822, 1209, 1396, 1578, 1895
BseNI	ACTGG	5 cut(s)	606, 768, 961, 1639, 1709
BseSI	GKGCMC	1 cut(s)	2044
BseXI	GCAGC	5 cut(s)	571, 649, 799, 874, 1978
BsgI	GTGCAG	1 cut(s)	665
Bsh1236I	CGCG	2 cut(s)	394, 1984
Bsh1285I	CGRYCG	2 cut(s)	197, 220
BshFI	GGCC	7 cut(s)	191, 208, 223, 1378, 1726, 1891, 1957
BshNI	GGYRCC	2 cut(s)	97, 2039
BsiEI	CGRYCG	2 cut(s)	197, 220
BsiHKAI	GWGCWC	2 cut(s)	1309, 1846
BsiSI	CCGG	5 cut(s)	26, 205, 220, 249, 365
BslFI	GGGAC	4 cut(s)	806, 1224, 1438, 1470
BslI	CCNNNNNNNGG	5 cut(s)	199, 255, 725, 829, 1898
BsmAI	GTCTC	1 cut(s)	994
BsmFI	GGGAC	4 cut(s)	806, 1224, 1438, 1470
BsmI	GAATGC	1 cut(s)	1882
BsnI	GGCC	7 cut(s)	191, 208, 223, 1378, 1726, 1891, 1957
Bso31I	GGTCTC	1 cut(s)	994
Bsp1286I	GDGCHC	6 cut(s)	719, 1309, 1467, 1565, 1846, 2044
Bsp1407I	TGTACA	1 cut(s)	1095
Bsp143I	GATC	5 cut(s)	7, 194, 322, 1006, 1798
Bsp1720I	GCTNAGC	1 cut(s)	1546
BspANI	GGCC	7 cut(s)	191, 208, 223, 1378, 1726, 1891, 1957
BspCNI	CTCAG	7 cut(s)	66, 161, 821, 1210, 1395, 1577, 1894
BspFNI	CGCG	2 cut(s)	394, 1984
BspLI	GGNNCC	6 cut(s)	76, 99, 354, 372, 1872, 2041
BspMAI	CTGCAG	1 cut(s)	1732
BspPI	GGATC	2 cut(s)	15, 1793
BspQI	GCTCTTC	2 cut(s)	1851, 2079
BspT107I	GGYRCC	2 cut(s)	97, 2039
BspTNI	GGTCTC	1 cut(s)	994
BsrBI	CCGCTC	2 cut(s)	386, 419
BsrFI	RCCGGY	2 cut(s)	204, 219
BsrGI	TGTACA	1 cut(s)	1095
BsrI	ACTGG	5 cut(s)	606, 768, 961, 1639, 1709
BssAI	RCCGGY	2 cut(s)	204, 219
BssECI	CCNNGG	5 cut(s)	67, 1467, 1558, 1785, 1827
BssMI	GATC	5 cut(s)	7, 194, 322, 1006, 1798
BssNI	GRCGYC	3 cut(s)	98, 276, 333
BssSI	CACGAG	2 cut(s)	170, 1587
BssT1I	CCWWGG	1 cut(s)	1467
Bst2BI	CACGAG	2 cut(s)	170, 1587
Bst2UI	CCWGG	5 cut(s)	627, 1349, 1559, 1828, 1959
Bst4CI	ACNGT	4 cut(s)	347, 1295, 1481, 2036
Bst6I	CTCTTC	6 cut(s)	91, 973, 1851, 1880, 1957, 2079
BstACI	GRCGYC	3 cut(s)	98, 276, 333
BstAPI	GCANNNNNTGC	2 cut(s)	643, 1909
BstAUI	TGTACA	1 cut(s)	1095
BstC8I	GCNNGC	5 cut(s)	111, 1724, 1728, 1842, 1955
BstDEI	CTNAG	9 cut(s)	53, 148, 808, 900, 1218, 1382, 1546, 1564, 1881
BstDSI	CCRYGG	1 cut(s)	67
BstEII	GGTNACC	1 cut(s)	1768
BstF5I	GGATG	6 cut(s)	175, 541, 610, 779, 1042, 1320
BstFNI	CGCG	2 cut(s)	394, 1984
BstH2I	RGCGCY	2 cut(s)	101, 365
BstHHI	GCGC	2 cut(s)	100, 364
BstKTI	GATC	5 cut(s)	10, 197, 325, 1009, 1801
BstMAI	GTCTC	1 cut(s)	994
BstMBI	GATC	5 cut(s)	7, 194, 322, 1006, 1798
BstMCI	CGRYCG	2 cut(s)	197, 220
BstNI	CCWGG	5 cut(s)	627, 1349, 1559, 1828, 1959
BstNSI	RCATGY	4 cut(s)	124, 1642, 1907, 2056
BstPI	GGTNACC	1 cut(s)	1768
BstSCI	CCNGG	5 cut(s)	625, 1347, 1557, 1826, 1957
BstSFI	CTRYAG	3 cut(s)	871, 1717, 1728
BstSLI	GKGCMC	1 cut(s)	2044
BstUI	CGCG	2 cut(s)	394, 1984
BstV1I	GCAGC	5 cut(s)	571, 649, 799, 874, 1978
BstX2I	RGATCY	2 cut(s)	7, 1798
BstYI	RGATCY	2 cut(s)	7, 1798
BsuRI	GGCC	7 cut(s)	191, 208, 223, 1378, 1726, 1891, 1957
BtgI	CCRYGG	1 cut(s)	67
BtsCI	GGATG	6 cut(s)	175, 541, 610, 779, 1042, 1320
BtsI	GCAGTG	1 cut(s)	1523
BtsIMutI	CAGTG	5 cut(s)	156, 352, 775, 1523, 2041
Cac8I	GCNNGC	5 cut(s)	111, 1724, 1728, 1842, 1955
CaiI	CAGNNNCTG	2 cut(s)	493, 980
CfoI	GCGC	2 cut(s)	100, 364
Cfr10I	RCCGGY	2 cut(s)	204, 219
Cfr13I	GGNCC	9 cut(s)	190, 202, 207, 222, 353, 427, 1376, 1779, 1870
CpoI	CGGWCCG	2 cut(s)	202, 1779
CseI	GACGC	2 cut(s)	284, 1983
Csp6I	GTAC	5 cut(s)	13, 575, 803, 1096, 1632
CspI	CGGWCCG	2 cut(s)	202, 1779
CviQI	GTAC	5 cut(s)	13, 575, 803, 1096, 1632
DdeI	CTNAG	9 cut(s)	53, 148, 808, 900, 1218, 1382, 1546, 1564, 1881
DinI	GGCGCC	1 cut(s)	99
DpnI	GATC	5 cut(s)	9, 196, 324, 1008, 1800
DpnII	GATC	5 cut(s)	7, 194, 322, 1006, 1798
DraIII	CACNNNGTG	1 cut(s)	1985
Eam1104I	CTCTTC	6 cut(s)	91, 973, 1851, 1880, 1957, 2079
EarI	CTCTTC	6 cut(s)	91, 973, 1851, 1880, 1957, 2079
EciI	GGCGGA	4 cut(s)	20, 215, 378, 437
Eco130I	CCWWGG	1 cut(s)	1467
Eco147I	AGGCCT	2 cut(s)	1726, 1957
Eco24I	GRGCYC	3 cut(s)	719, 1467, 1565
Eco31I	GGTCTC	1 cut(s)	994
Eco47I	GGWCC	5 cut(s)	202, 353, 427, 1779, 1870
Eco57I	CTGAAG	2 cut(s)	378, 1320
Eco91I	GGTNACC	1 cut(s)	1768
EcoO109I	RGGNCCY	1 cut(s)	353
EcoO65I	GGTNACC	1 cut(s)	1768
EcoRI	GAATTC	1 cut(s)	1522
EcoRII	CCWGG	5 cut(s)	625, 1347, 1557, 1826, 1957
EcoT14I	CCWWGG	1 cut(s)	1467
EcoT38I	GRGCYC	3 cut(s)	719, 1467, 1565
EgeI	GGCGCC	1 cut(s)	99
EheI	GGCGCC	1 cut(s)	99
ErhI	CCWWGG	1 cut(s)	1467
FaqI	GGGAC	4 cut(s)	806, 1224, 1438, 1470
FauI	CCCGC	4 cut(s)	86, 118, 248, 2018
FauNDI	CATATG	2 cut(s)	657, 1914
FbaI	TGATCA	1 cut(s)	1006
FblI	GTMKAC	1 cut(s)	1713
FokI	GGATG	6 cut(s)	162, 548, 597, 786, 1049, 1327
FriOI	GRGCYC	3 cut(s)	719, 1467, 1565
FspBI	CTAG	5 cut(s)	702, 1460, 1629, 1745, 1803
GlaI	GCGC	2 cut(s)	99, 363
GsuI	CTGGAG	2 cut(s)	548, 1602
HaeII	RGCGCY	2 cut(s)	101, 365
HaeIII	GGCC	7 cut(s)	191, 208, 223, 1378, 1726, 1891, 1957
HapII	CCGG	5 cut(s)	26, 205, 220, 249, 365
HgaI	GACGC	2 cut(s)	284, 1983
HhaI	GCGC	2 cut(s)	100, 364
Hin1I	GRCGYC	3 cut(s)	98, 276, 333
Hin6I	GCGC	2 cut(s)	98, 362
HinP1I	GCGC	2 cut(s)	98, 362
HincII	GTYRAC	3 cut(s)	585, 1336, 1440
HindII	GTYRAC	3 cut(s)	585, 1336, 1440
HindIII	AAGCTT	2 cut(s)	480, 864
HpaI	GTTAAC	1 cut(s)	585
HpaII	CCGG	5 cut(s)	26, 205, 220, 249, 365
HphI	GGTGA	6 cut(s)	341, 935, 1469, 1750, 1971, 2027
Hpy166II	GTNNAC	8 cut(s)	585, 1096, 1336, 1440, 1477, 1714, 1741, 1870
Hpy188III	TCNNGA	6 cut(s)	170, 356, 784, 1135, 1189, 1619
Hpy8I	GTNNAC	8 cut(s)	585, 1096, 1336, 1440, 1477, 1714, 1741, 1870
Hpy99I	CGWCG	2 cut(s)	278, 316
HpyCH4III	ACNGT	4 cut(s)	347, 1295, 1481, 2036
HpyCH4IV	ACGT	2 cut(s)	333, 1861
HpyF3I	CTNAG	9 cut(s)	53, 148, 808, 900, 1218, 1382, 1546, 1564, 1881
HpySE526I	ACGT	2 cut(s)	333, 1861
Hsp92I	GRCGYC	3 cut(s)	98, 276, 333
HspAI	GCGC	2 cut(s)	98, 362
KasI	GGCGCC	1 cut(s)	97
Ksp22I	TGATCA	1 cut(s)	1006
KspAI	GTTAAC	1 cut(s)	585
Kzo9I	GATC	5 cut(s)	7, 194, 322, 1006, 1798
LguI	GCTCTTC	2 cut(s)	1851, 2079
LmnI	GCTCC	5 cut(s)	80, 391, 567, 1560, 1621
Lsp1109I	GCAGC	5 cut(s)	571, 649, 799, 874, 1978
LweI	GCATC	9 cut(s)	184, 519, 619, 624, 764, 967, 1027, 1305, 1978
MaeI	CTAG	5 cut(s)	702, 1460, 1629, 1745, 1803
MaeII	ACGT	2 cut(s)	333, 1861
MaeIII	GTNAC	5 cut(s)	329, 341, 683, 1579, 1768
MalI	GATC	5 cut(s)	9, 196, 324, 1008, 1800
MbiI	CCGCTC	2 cut(s)	386, 419
MboI	GATC	5 cut(s)	7, 194, 322, 1006, 1798
MfeI	CAATTG	3 cut(s)	182, 543, 1248
MflI	RGATCY	2 cut(s)	7, 1798
MhlI	GDGCHC	6 cut(s)	719, 1309, 1467, 1565, 1846, 2044
MluCI	AATT	8 cut(s)	182, 502, 543, 1138, 1192, 1248, 1270, 1522
Mly113I	GGCGCC	1 cut(s)	98
MlyI	GAGTC	4 cut(s)	23, 206, 263, 853
MmeI	TCCRAC	5 cut(s)	69, 240, 294, 297, 420
MroXI	GAANNNNTTC	1 cut(s)	1226
MseI	TTAA	5 cut(s)	377, 465, 584, 1488, 1758
MslI	CAYNNNNRTG	2 cut(s)	119, 1368
MspA1I	CMGCKG	2 cut(s)	339, 812
MspI	CCGG	5 cut(s)	26, 205, 220, 249, 365
MspR9I	CCNGG	5 cut(s)	627, 1349, 1559, 1828, 1959
MunI	CAATTG	3 cut(s)	182, 543, 1248
Mva1269I	GAATGC	1 cut(s)	1882
MvaI	CCWGG	5 cut(s)	627, 1349, 1559, 1828, 1959
MvnI	CGCG	2 cut(s)	394, 1984
NarI	GGCGCC	1 cut(s)	98
NdeI	CATATG	2 cut(s)	657, 1914
NdeII	GATC	5 cut(s)	7, 194, 322, 1006, 1798
NlaIV	GGNNCC	6 cut(s)	76, 99, 354, 372, 1872, 2041
NmeAIII	GCCGAG	1 cut(s)	1810
NmuCI	GTSAC	3 cut(s)	329, 341, 1579
NspI	RCATGY	4 cut(s)	124, 1642, 1907, 2056
PceI	AGGCCT	2 cut(s)	1726, 1957
PciI	ACATGT	1 cut(s)	2052
PciSI	GCTCTTC	2 cut(s)	1851, 2079
PcsI	WCGNNNNNNNCGW	1 cut(s)	1981
PctI	GAATGC	1 cut(s)	1882
PdmI	GAANNNNTTC	1 cut(s)	1226
PfeI	GAWTC	7 cut(s)	245, 496, 787, 944, 1402, 1675, 2009
PflMI	CCANNNNNTGG	1 cut(s)	725
Ple19I	CGATCG	1 cut(s)	197
PleI	GAGTC	4 cut(s)	23, 206, 263, 853
PluTI	GGCGCC	1 cut(s)	101
PpsI	GAGTC	4 cut(s)	23, 206, 263, 853
PpuMI	RGGWCCY	1 cut(s)	353
PscI	ACATGT	1 cut(s)	2052
PshBI	ATTAAT	1 cut(s)	465
PsiI	TTATAA	1 cut(s)	759
Psp5II	RGGWCCY	1 cut(s)	353
Psp6I	CCWGG	5 cut(s)	625, 1347, 1557, 1826, 1957
PspEI	GGTNACC	1 cut(s)	1768
PspGI	CCWGG	5 cut(s)	625, 1347, 1557, 1826, 1957
PspN4I	GGNNCC	6 cut(s)	76, 99, 354, 372, 1872, 2041
PspPI	GGNCC	9 cut(s)	190, 202, 207, 222, 353, 427, 1376, 1779, 1870
PspPPI	RGGWCCY	1 cut(s)	353
PstI	CTGCAG	1 cut(s)	1732
PstNI	CAGNNNCTG	2 cut(s)	493, 980
PsuI	RGATCY	2 cut(s)	7, 1798
PvuI	CGATCG	1 cut(s)	197
PvuII	CAGCTG	2 cut(s)	339, 812
RsaI	GTAC	5 cut(s)	14, 576, 804, 1097, 1633
RsaNI	GTAC	5 cut(s)	13, 575, 803, 1096, 1632
RseI	CAYNNNNRTG	2 cut(s)	119, 1368
Rsr2I	CGGWCCG	2 cut(s)	202, 1779
RsrII	CGGWCCG	2 cut(s)	202, 1779
SapI	GCTCTTC	2 cut(s)	1851, 2079
SaqAI	TTAA	5 cut(s)	377, 465, 584, 1488, 1758
Sau3AI	GATC	5 cut(s)	7, 194, 322, 1006, 1798
Sau96I	GGNCC	9 cut(s)	190, 202, 207, 222, 353, 427, 1376, 1779, 1870
SbfI	CCTGCAGG	1 cut(s)	1732
ScaI	AGTACT	1 cut(s)	1633
SchI	GAGTC	4 cut(s)	23, 206, 263, 853
ScrFI	CCNGG	5 cut(s)	627, 1349, 1559, 1828, 1959
SdaI	CCTGCAGG	1 cut(s)	1732
SduI	GDGCHC	6 cut(s)	719, 1309, 1467, 1565, 1846, 2044
SfaNI	GCATC	9 cut(s)	184, 519, 619, 624, 764, 967, 1027, 1305, 1978
SfcI	CTRYAG	3 cut(s)	871, 1717, 1728
SfoI	GGCGCC	1 cut(s)	99
SinI	GGWCC	5 cut(s)	202, 353, 427, 1779, 1870
SmiMI	CAYNNNNRTG	2 cut(s)	119, 1368
SmlI	CTYRAG	2 cut(s)	861, 1031
SmoI	CTYRAG	2 cut(s)	861, 1031
Sse8387I	CCTGCAGG	1 cut(s)	1732
Sse9I	AATT	8 cut(s)	182, 502, 543, 1138, 1192, 1248, 1270, 1522
SseBI	AGGCCT	2 cut(s)	1726, 1957
SspDI	GGCGCC	1 cut(s)	97
SspI	AATATT	1 cut(s)	763
SspMI	CTAG	5 cut(s)	702, 1460, 1629, 1745, 1803
StuI	AGGCCT	2 cut(s)	1726, 1957
StyD4I	CCNGG	5 cut(s)	625, 1347, 1557, 1826, 1957
StyI	CCWWGG	1 cut(s)	1467
TaaI	ACNGT	4 cut(s)	347, 1295, 1481, 2036
TaiI	ACGT	2 cut(s)	336, 1864
TaqI	TCGA	2 cut(s)	527, 857
TasI	AATT	8 cut(s)	182, 502, 543, 1138, 1192, 1248, 1270, 1522
TatI	WGTACW	3 cut(s)	574, 1095, 1631
TfiI	GAWTC	7 cut(s)	245, 496, 787, 944, 1402, 1675, 2009
Tru1I	TTAA	5 cut(s)	377, 465, 584, 1488, 1758
Tru9I	TTAA	5 cut(s)	377, 465, 584, 1488, 1758
TscAI	CASTG	5 cut(s)	156, 352, 775, 1523, 2041
TseFI	GTSAC	3 cut(s)	329, 341, 1579
TseI	GCWGC	5 cut(s)	559, 637, 812, 887, 1991
Tsp45I	GTSAC	3 cut(s)	329, 341, 1579
TspDTI	ATGAA	7 cut(s)	253, 491, 552, 960, 1352, 1424, 1662
TspGWI	ACGGA	3 cut(s)	30, 530, 1356
TspRI	CASTG	5 cut(s)	156, 352, 775, 1523, 2041
Van91I	CCANNNNNTGG	1 cut(s)	725
VpaK11BI	GGWCC	5 cut(s)	202, 353, 427, 1779, 1870
VspI	ATTAAT	1 cut(s)	465
XapI	RAATTY	5 cut(s)	502, 1138, 1192, 1270, 1522
XceI	RCATGY	4 cut(s)	124, 1642, 1907, 2056
XmiI	GTMKAC	1 cut(s)	1713
XmnI	GAANNNNTTC	1 cut(s)	1226
XspI	CTAG	5 cut(s)	702, 1460, 1629, 1745, 1803
ZraI	GACGTC	1 cut(s)	334
ZrmI	AGTACT	1 cut(s)	1633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.