Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000393.1

Orthogroup ID

OG0015677

Physical Location & Seq

Genomic Coordinates Forward (+)

153024 .. 156490

Gene Structure 3467 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

atggcggagccatcaccaccggctccggcaccgccgacgatgagtgagaaccagaaccagaatcagaatccaagctcggcgtggccggcgacgcacatgactgacgtggatgtggacgccttggctcactgcaccagctaccttagcctccaggacgtctccaacatggccatgacctgcaagtacctccaaaaagtcgcctactccgactctatctggcgccgcttcttcagggagagttggccgcagcaaacacctgcatttgcttcgccaacttcaggagctagggaagcgtatttactgcggcgcaaggatttgctgcaattcaagttttcggacccggttgttgccgatttcatcacagatacaaagcctgttgaccacattttattgaatgaaaagcatataatcttctctaagggttcagagatacaagtgataaatattgatgactggttaagtgggagggattcggttgtcacactcagtgatcacagcgcaagaattacttgtatgagactgttttcgcttaatgaaacatctttatatcgaagtgaagcacaaaggaaagagaatgttttggtaacttcaagctccgatcatggtatccggctatggtggaagggtgcttgccgacgatgttttacaggtcacaaaggctcagttacggccctgtctgataaattgttaggcaatggcactggaaaagtattggcaagtggaggggaagatggcacagttcgcctttggtctcttacttccagtggaagacgtggtcagcatgctttaaaggctactttctatggtcatgagaaacccatcaaattgatgtcagttgctgggcataaaacttctattttggtgactgttacaggagattctaaggtaaggttgtgggatgcagctgcacagtctgctgttccttcttcatcttgtgtgggaatgacttcaattcctggtccccttataaacatgaagtgccatgaacaattgctctatcttgctgccggttcctctgttgctgtaatcgatctgaggacaatgagaaaagttctcccatattcgatagatgaaaagctatgttcttttgatgccattccttcaaaatccttgtgctgtgttggcagcagtaatggcagagcgatgctttacgatatcaggagggtcaagctccccaactcaaaagcagaaccggtaaccgagttggatggtggacacattgggccattgactcacttgaacatggattcatacaaaatagttacaggaggccgaggcaggggagattctcatgttaatatttgggagtccaacactggtgcactcgtcagttccctgacttgtgatctggaggaagcaagtatggatgccctagctgtaaatgggtgtcaaattgttactgccaacaccagccatatggaagattcgggagttctacgctatagggacttcagcaatgcttcatgtcctgctgttaatagtgaaggtgatgaccgtgtttcaaagttttggaatccacaatcttatagtgatagtgattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000428 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005737 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010604 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0016604 GO:0016607 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0030914 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0033276 GO:0035770 GO:0036211 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070461 GO:0071704 GO:0071840 GO:0080090 GO:0090575 GO:0140110 GO:1901564 GO:1902493 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:1990904 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

F-box F-box-like WD40

Protein Analysis

513

Amino Acids

56.09

Weight (kDa)

6.94

Isoelectric Point (pI)

46.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	43 - 78	2.5e-06	F-box-like
WD40_CDC20-Fz	PF24807	141 - 307	6.8e-10	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	159 - 253	3.1e-07	WDR5 beta-propeller domain
Beta-prop_WDR5	PF25175	171 - 388	1.6e-12	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	188 - 307	1.8e-12	WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	190 - 304	4.3e-06	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	191 - 301	4.7e-07	WDR3 second beta-propeller domain
Beta-prop_SCAP	PF24017	194 - 302	7.7e-06	SCAP Beta-propeller
WD40	PF00400	210 - 251	1.4e-07	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	232 - 447	2.5e-19	THOC3 beta-propeller domain
WD40_Prp19	PF24814	235 - 449	6.9e-10	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015677)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g49170
malus_domestica	MD09G1047900.v1.1 MD17G1048000.v1.1 MD17G1048100.v1.1
prunus_persica	Prupe.3G271100_v2.0.a1
pyrus_communis	pycom17g04280
rosa_chinensis	RchiOBHm_Chr2g0169041
rosa_laevigata	RLG00000021826
rosa_multiflora	Rmu_ssc0000393.1_g000025
rosa_roxburghii	Rroxscaffold_2G00082510
rosa_rugosa	Rorug02G0536500
rosa_samantha	Rh2AG608000 Rh2BG620700 Rh2CG589600 Rh2DG631300
rosa_wichuraiana	Rw2G050420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	968
AarI	CACCTGC	1 cut(s)	265
AatII	GACGTC	1 cut(s)	159
Acc36I	ACCTGC	2 cut(s)	185, 265
AccB1I	GGYRCC	2 cut(s)	28, 219
AciI	CCGC	5 cut(s)	5, 32, 223, 245, 304
AcoI	YGGCCR	3 cut(s)	83, 168, 242
AcuI	CTGAAG	3 cut(s)	214, 261, 1435
AcyI	GRCGYC	3 cut(s)	117, 156, 220
AdeI	CACNNNGTG	1 cut(s)	488
AfaI	GTAC	1 cut(s)	185
AfiI	CCNNNNNNNGG	2 cut(s)	278, 1279
AgeI	ACCGGT	1 cut(s)	1192
AgsI	TTSAA	7 cut(s)	328, 394, 591, 951, 1104, 1240, 1503
AjiI	CACGTC	2 cut(s)	106, 773
AjnI	CCWGG	2 cut(s)	150, 955
AluBI	AGCT	8 cut(s)	75, 138, 284, 594, 905, 1078, 1171, 1376
AluI	AGCT	8 cut(s)	75, 138, 284, 594, 905, 1078, 1171, 1376
Alw21I	GWGCWC	1 cut(s)	1324
Alw26I	GTCTC	3 cut(s)	163, 511, 756
Alw44I	GTGCAC	1 cut(s)	1320
AlwNI	CAGNNNCTG	1 cut(s)	839
AoxI	GGCC	6 cut(s)	83, 168, 242, 669, 1223, 1270
ApaLI	GTGCAC	1 cut(s)	1320
ApeKI	GCWGC	6 cut(s)	247, 319, 902, 905, 1004, 1125
AsiGI	ACCGGT	1 cut(s)	1192
Asp700I	GAANNNNTTC	1 cut(s)	946
AspLEI	GCGC	3 cut(s)	222, 309, 500
AspS9I	GGNCC	4 cut(s)	337, 670, 959, 1223
AsuC2I	CCSGG	1 cut(s)	341
AsuHPI	GGTGA	3 cut(s)	6, 874, 1499
AvaII	GGWCC	2 cut(s)	337, 959
BaeGI	GKGCMC	1 cut(s)	1324
BalI	TGGCCA	1 cut(s)	170
BanI	GGYRCC	2 cut(s)	28, 219
BarI	GAAGNNNNNNTAC	2 cut(s)	282, 314
BbsI	GAAGAC	1 cut(s)	775
Bbv12I	GWGCWC	1 cut(s)	1324
BbvI	GCAGC	6 cut(s)	259, 306, 892, 914, 991, 1137
BccI	CCATC	4 cut(s)	19, 725, 827, 1202
BceAI	ACGGC	1 cut(s)	684
BcgI	CGANNNNNNTGC	2 cut(s)	249, 283
BciT130I	CCWGG	2 cut(s)	152, 957
BciVI	GTATCC	1 cut(s)	617
BclI	TGATCA	1 cut(s)	490
BcnI	CCSGG	1 cut(s)	341
BcoDI	GTCTC	3 cut(s)	163, 511, 756
BfaI	CTAG	2 cut(s)	285, 1373
BfmI	CTRYAG	1 cut(s)	1441
BfoI	RGCGCY	1 cut(s)	223
BfuAI	ACCTGC	2 cut(s)	185, 265
BfuI	GTATCC	1 cut(s)	617
BisI	GCNGC	9 cut(s)	223, 245, 248, 305, 320, 903, 906, 1005, 1126
BlsI	GCNGC	9 cut(s)	224, 246, 249, 306, 321, 904, 907, 1006, 1127
Bme1390I	CCNGG	3 cut(s)	152, 341, 957
Bme18I	GGWCC	2 cut(s)	337, 959
BmgBI	CACGTC	2 cut(s)	106, 773
BmgT120I	GGNCC	4 cut(s)	337, 670, 959, 1223
BmiI	GGNNCC	7 cut(s)	9, 24, 30, 221, 339, 961, 1012
BmrFI	CCNGG	3 cut(s)	152, 341, 957
BmsI	GCATC	4 cut(s)	889, 1081, 1134, 1357
BpiI	GAAGAC	1 cut(s)	775
BpmI	CTGGAG	2 cut(s)	134, 1370
Bpu10I	CCTNAGC	1 cut(s)	143
BpuMI	CCSGG	1 cut(s)	341
Bsa29I	ATCGAT	1 cut(s)	1029
BsaHI	GRCGYC	3 cut(s)	117, 156, 220
BsaI	GGTCTC	1 cut(s)	756
BsaJI	CCNNGG	2 cut(s)	120, 1273
BsaWI	WCCGGW	1 cut(s)	1192
Bsc4I	CCNNNNNNNGG	2 cut(s)	278, 1279
Bse118I	RCCGGY	4 cut(s)	19, 85, 1007, 1192
Bse1I	ACTGG	4 cut(s)	458, 706, 762, 1321
Bse3DI	GCAATG	2 cut(s)	700, 1462
BseBI	CCWGG	2 cut(s)	152, 957
BseCI	ATCGAT	1 cut(s)	1029
BseDI	CCNNGG	2 cut(s)	120, 1273
BseGI	GGATG	4 cut(s)	115, 904, 1213, 1372
BseLI	CCNNNNNNNGG	2 cut(s)	278, 1279
BseMI	GCAATG	2 cut(s)	700, 1462
BseMII	CTCAG	3 cut(s)	499, 675, 1025
BseNI	ACTGG	4 cut(s)	458, 706, 762, 1321
BseSI	GKGCMC	1 cut(s)	1324
BseXI	GCAGC	6 cut(s)	259, 306, 892, 914, 991, 1137
BseYI	CCCAGC	1 cut(s)	839
BsgI	GTGCAG	2 cut(s)	115, 891
BshFI	GGCC	6 cut(s)	85, 170, 244, 671, 1225, 1272
BshNI	GGYRCC	2 cut(s)	28, 219
BshTI	ACCGGT	1 cut(s)	1192
BshVI	ATCGAT	1 cut(s)	1029
BsiHKAI	GWGCWC	1 cut(s)	1324
BsiSI	CCGG	7 cut(s)	20, 26, 86, 341, 610, 1008, 1193
BslFI	GGGAC	2 cut(s)	945, 1460
BslI	CCNNNNNNNGG	2 cut(s)	278, 1279
BsmAI	GTCTC	3 cut(s)	163, 511, 756
BsmBI	CGTCTC	1 cut(s)	163
BsmFI	GGGAC	2 cut(s)	945, 1460
BsnI	GGCC	6 cut(s)	85, 170, 244, 671, 1225, 1272
Bso31I	GGTCTC	1 cut(s)	756
Bsp1286I	GDGCHC	1 cut(s)	1324
Bsp143I	GATC	4 cut(s)	490, 598, 1030, 1345
BspACI	CCGC	5 cut(s)	5, 32, 223, 245, 304
BspANI	GGCC	6 cut(s)	85, 170, 244, 671, 1225, 1272
BspCNI	CTCAG	3 cut(s)	498, 674, 1026
BspDI	ATCGAT	1 cut(s)	1029
BspHI	TCATGA	1 cut(s)	808
BspLI	GGNNCC	7 cut(s)	9, 24, 30, 221, 339, 961, 1012
BspMI	ACCTGC	2 cut(s)	185, 265
BspT107I	GGYRCC	2 cut(s)	28, 219
BspTNI	GGTCTC	1 cut(s)	756
BsrDI	GCAATG	2 cut(s)	700, 1462
BsrFI	RCCGGY	4 cut(s)	19, 85, 1007, 1192
BsrI	ACTGG	4 cut(s)	458, 706, 762, 1321
BssAI	RCCGGY	4 cut(s)	19, 85, 1007, 1192
BssECI	CCNNGG	2 cut(s)	120, 1273
BssMI	GATC	4 cut(s)	490, 598, 1030, 1345
BssNI	GRCGYC	3 cut(s)	117, 156, 220
BssT1I	CCWWGG	1 cut(s)	120
Bst2UI	CCWGG	2 cut(s)	152, 957
Bst4CI	ACNGT	5 cut(s)	522, 739, 868, 912, 1496
BstACI	GRCGYC	3 cut(s)	117, 156, 220
BstAPI	GCANNNNNTGC	1 cut(s)	914
BstC8I	GCNNGC	3 cut(s)	87, 631, 783
BstDEI	CTNAG	6 cut(s)	143, 417, 485, 661, 882, 1034
BstEII	GGTNACC	1 cut(s)	1195
BstF5I	GGATG	4 cut(s)	115, 904, 1213, 1372
BstH2I	RGCGCY	1 cut(s)	223
BstHHI	GCGC	3 cut(s)	222, 309, 500
BstKTI	GATC	4 cut(s)	493, 601, 1033, 1348
BstMAI	GTCTC	3 cut(s)	163, 511, 756
BstMBI	GATC	4 cut(s)	490, 598, 1030, 1345
BstMWI	GCNNNNNNNGC	9 cut(s)	86, 91, 144, 290, 741, 791, 914, 1122, 1134
BstNI	CCWGG	2 cut(s)	152, 957
BstNSI	RCATGY	1 cut(s)	785
BstPI	GGTNACC	1 cut(s)	1195
BstSCI	CCNGG	3 cut(s)	150, 339, 955
BstSFI	CTRYAG	1 cut(s)	1441
BstSLI	GKGCMC	1 cut(s)	1324
BstV1I	GCAGC	6 cut(s)	259, 306, 892, 914, 991, 1137
BstV2I	GAAGAC	1 cut(s)	775
BstXI	CCANNNNNNTGG	1 cut(s)	1417
Bsu15I	ATCGAT	1 cut(s)	1029
BsuI	GTATCC	1 cut(s)	617
BsuRI	GGCC	6 cut(s)	85, 170, 244, 671, 1225, 1272
BsuTUI	ATCGAT	1 cut(s)	1029
BtgZI	GCGATG	1 cut(s)	1157
BtrI	CACGTC	2 cut(s)	106, 773
BtsCI	GGATG	4 cut(s)	115, 904, 1213, 1372
BtsI	GCAGTG	1 cut(s)	127
BtsIMutI	CAGTG	5 cut(s)	127, 493, 699, 769, 1314
BveI	ACCTGC	2 cut(s)	185, 265
Cac8I	GCNNGC	3 cut(s)	87, 631, 783
CaiI	CAGNNNCTG	1 cut(s)	839
CciI	TCATGA	1 cut(s)	808
CfoI	GCGC	3 cut(s)	222, 309, 500
Cfr10I	RCCGGY	4 cut(s)	19, 85, 1007, 1192
Cfr13I	GGNCC	4 cut(s)	337, 670, 959, 1223
ClaI	ATCGAT	1 cut(s)	1029
CseI	GACGC	2 cut(s)	100, 125
Csp6I	GTAC	1 cut(s)	184
CspAI	ACCGGT	1 cut(s)	1192
CviQI	GTAC	1 cut(s)	184
DdeI	CTNAG	6 cut(s)	143, 417, 485, 661, 882, 1034
DinI	GGCGCC	1 cut(s)	221
DpnI	GATC	4 cut(s)	492, 600, 1032, 1347
DpnII	GATC	4 cut(s)	490, 598, 1030, 1345
DraI	TTTAAA	1 cut(s)	789
DraIII	CACNNNGTG	1 cut(s)	488
EaeI	YGGCCR	3 cut(s)	83, 168, 242
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	1 cut(s)	120
Eco31I	GGTCTC	1 cut(s)	756
Eco32I	GATATC	1 cut(s)	1156
Eco47I	GGWCC	2 cut(s)	337, 959
Eco57I	CTGAAG	3 cut(s)	214, 261, 1435
Eco91I	GGTNACC	1 cut(s)	1195
EcoO65I	GGTNACC	1 cut(s)	1195
EcoRII	CCWGG	2 cut(s)	150, 955
EcoRV	GATATC	1 cut(s)	1156
EcoT14I	CCWWGG	1 cut(s)	120
EgeI	GGCGCC	1 cut(s)	221
EheI	GGCGCC	1 cut(s)	221
ErhI	CCWWGG	1 cut(s)	120
Esp3I	CGTCTC	1 cut(s)	163
FalI	AAGNNNNNCTT	2 cut(s)	493, 525
FaqI	GGGAC	2 cut(s)	945, 1460
FauNDI	CATATG	1 cut(s)	1416
FbaI	TGATCA	1 cut(s)	490
Fnu4HI	GCNGC	9 cut(s)	223, 245, 248, 305, 320, 903, 906, 1005, 1126
FokI	GGATG	4 cut(s)	122, 911, 1220, 1379
Fsp4HI	GCNGC	9 cut(s)	223, 245, 248, 305, 320, 903, 906, 1005, 1126
FspBI	CTAG	2 cut(s)	285, 1373
GlaI	GCGC	3 cut(s)	221, 308, 499
GluI	GCNGC	9 cut(s)	223, 245, 248, 305, 320, 903, 906, 1005, 1126
GsaI	CCCAGC	1 cut(s)	843
GsuI	CTGGAG	2 cut(s)	134, 1370
HaeII	RGCGCY	1 cut(s)	223
HaeIII	GGCC	6 cut(s)	85, 170, 244, 671, 1225, 1272
HapII	CCGG	7 cut(s)	20, 26, 86, 341, 610, 1008, 1193
HgaI	GACGC	2 cut(s)	100, 125
HhaI	GCGC	3 cut(s)	222, 309, 500
Hin1I	GRCGYC	3 cut(s)	117, 156, 220
Hin6I	GCGC	3 cut(s)	220, 307, 498
HinP1I	GCGC	3 cut(s)	220, 307, 498
HincII	GTYRAC	1 cut(s)	379
HindII	GTYRAC	1 cut(s)	379
HpaII	CCGG	7 cut(s)	20, 26, 86, 341, 610, 1008, 1193
HphI	GGTGA	3 cut(s)	6, 874, 1499
Hpy166II	GTNNAC	4 cut(s)	115, 379, 1214, 1322
Hpy188I	TCNGA	7 cut(s)	66, 208, 337, 427, 598, 679, 1035
Hpy188III	TCNNGA	5 cut(s)	279, 809, 1159, 1349, 1428
Hpy8I	GTNNAC	4 cut(s)	115, 379, 1214, 1322
Hpy99I	CGWCG	3 cut(s)	40, 94, 639
HpyAV	CCTTC	4 cut(s)	616, 933, 1110, 1478
HpyCH4III	ACNGT	5 cut(s)	522, 739, 868, 912, 1496
HpyCH4IV	ACGT	3 cut(s)	105, 156, 772
HpyCH4V	TGCA	7 cut(s)	132, 180, 260, 322, 902, 908, 1322
HpyF10VI	GCNNNNNNNGC	9 cut(s)	86, 91, 144, 290, 741, 791, 914, 1122, 1134
HpyF3I	CTNAG	6 cut(s)	143, 417, 485, 661, 882, 1034
HpySE526I	ACGT	3 cut(s)	105, 156, 772
Hsp92I	GRCGYC	3 cut(s)	117, 156, 220
HspAI	GCGC	3 cut(s)	220, 307, 498
KasI	GGCGCC	1 cut(s)	219
KroI	GCCGGC	1 cut(s)	85
KroNI	GCCGGC	1 cut(s)	87
Ksp22I	TGATCA	1 cut(s)	490
Kzo9I	GATC	4 cut(s)	490, 598, 1030, 1345
LmnI	GCTCC	5 cut(s)	7, 28, 281, 599, 1176
Lsp1109I	GCAGC	6 cut(s)	259, 306, 892, 914, 991, 1137
LweI	GCATC	4 cut(s)	889, 1081, 1134, 1357
MaeI	CTAG	2 cut(s)	285, 1373
MaeII	ACGT	3 cut(s)	105, 156, 772
MaeIII	GTNAC	9 cut(s)	478, 583, 650, 664, 862, 868, 1195, 1261, 1396
MalI	GATC	4 cut(s)	492, 600, 1032, 1347
MboI	GATC	4 cut(s)	490, 598, 1030, 1345
MboII	GAAGA	6 cut(s)	220, 403, 740, 780, 918, 1433
MfeI	CAATTG	1 cut(s)	989
MhlI	GDGCHC	1 cut(s)	1324
MlsI	TGGCCA	1 cut(s)	170
MluCI	AATT	7 cut(s)	323, 504, 683, 824, 951, 989, 1392
MluNI	TGGCCA	1 cut(s)	170
Mly113I	GGCGCC	1 cut(s)	220
MlyI	GAGTC	3 cut(s)	203, 1225, 1316
MmeI	TCCRAC	4 cut(s)	186, 231, 1185, 1335
Mox20I	TGGCCA	1 cut(s)	170
MroNI	GCCGGC	1 cut(s)	85
MroXI	GAANNNNTTC	1 cut(s)	946
MscI	TGGCCA	1 cut(s)	170
MseI	TTAA	5 cut(s)	458, 531, 788, 1296, 1476
MslI	CAYNNNNRTG	1 cut(s)	170
Msp20I	TGGCCA	1 cut(s)	170
MspA1I	CMGCKG	1 cut(s)	905
MspI	CCGG	7 cut(s)	20, 26, 86, 341, 610, 1008, 1193
MspR9I	CCNGG	3 cut(s)	152, 341, 957
MunI	CAATTG	1 cut(s)	989
MvaI	CCWGG	2 cut(s)	152, 957
MwoI	GCNNNNNNNGC	9 cut(s)	86, 91, 144, 290, 741, 791, 914, 1122, 1134
NaeI	GCCGGC	1 cut(s)	87
NarI	GGCGCC	1 cut(s)	220
NciI	CCSGG	1 cut(s)	341
NdeI	CATATG	1 cut(s)	1416
NdeII	GATC	4 cut(s)	490, 598, 1030, 1345
NgoMIV	GCCGGC	1 cut(s)	85
NlaIV	GGNNCC	7 cut(s)	9, 24, 30, 221, 339, 961, 1012
NmeAIII	GCCGAG	2 cut(s)	56, 1298
NmuCI	GTSAC	3 cut(s)	478, 650, 862
NspI	RCATGY	1 cut(s)	785
PaeI	GCATGC	1 cut(s)	785
PagI	TCATGA	1 cut(s)	808
PaqCI	CACCTGC	1 cut(s)	265
PcsI	WCGNNNNNNNCGW	1 cut(s)	204
PdiI	GCCGGC	1 cut(s)	87
PdmI	GAANNNNTTC	1 cut(s)	946
PfeI	GAWTC	8 cut(s)	61, 67, 470, 878, 1247, 1286, 1424, 1513
PflFI	GACNNNGTC	1 cut(s)	774
PfoI	TCCNGGA	1 cut(s)	150
PinAI	ACCGGT	1 cut(s)	1192
PkrI	GCNGC	9 cut(s)	224, 246, 249, 306, 321, 904, 907, 1006, 1127
PleI	GAGTC	3 cut(s)	203, 1225, 1315
PluTI	GGCGCC	1 cut(s)	223
PpsI	GAGTC	3 cut(s)	203, 1225, 1315
PsiI	TTATAA	1 cut(s)	968
Psp6I	CCWGG	2 cut(s)	150, 955
PspEI	GGTNACC	1 cut(s)	1195
PspFI	CCCAGC	1 cut(s)	839
PspGI	CCWGG	2 cut(s)	150, 955
PspN4I	GGNNCC	7 cut(s)	9, 24, 30, 221, 339, 961, 1012
PspPI	GGNCC	4 cut(s)	337, 670, 959, 1223
PstNI	CAGNNNCTG	1 cut(s)	839
PsyI	GACNNNGTC	1 cut(s)	774
PvuII	CAGCTG	1 cut(s)	905
RsaI	GTAC	1 cut(s)	185
RsaNI	GTAC	1 cut(s)	184
RseI	CAYNNNNRTG	1 cut(s)	170
SaqAI	TTAA	5 cut(s)	458, 531, 788, 1296, 1476
SatI	GCNGC	9 cut(s)	223, 245, 248, 305, 320, 903, 906, 1005, 1126
Sau3AI	GATC	4 cut(s)	490, 598, 1030, 1345
Sau96I	GGNCC	4 cut(s)	337, 670, 959, 1223
SchI	GAGTC	3 cut(s)	203, 1225, 1316
ScrFI	CCNGG	3 cut(s)	152, 341, 957
SduI	GDGCHC	1 cut(s)	1324
SfaNI	GCATC	4 cut(s)	889, 1081, 1134, 1357
SfcI	CTRYAG	1 cut(s)	1441
SfoI	GGCGCC	1 cut(s)	221
SinI	GGWCC	2 cut(s)	337, 959
SmiMI	CAYNNNNRTG	1 cut(s)	170
SphI	GCATGC	1 cut(s)	785
Sse9I	AATT	7 cut(s)	323, 504, 683, 824, 951, 989, 1392
SsiI	CCGC	5 cut(s)	5, 32, 223, 245, 304
SspDI	GGCGCC	1 cut(s)	219
SspI	AATATT	2 cut(s)	445, 1300
SspMI	CTAG	2 cut(s)	285, 1373
StyD4I	CCNGG	3 cut(s)	150, 339, 955
StyI	CCWWGG	1 cut(s)	120
TaaI	ACNGT	5 cut(s)	522, 739, 868, 912, 1496
TaiI	ACGT	3 cut(s)	108, 159, 775
TaqI	TCGA	3 cut(s)	550, 1029, 1064
TasI	AATT	7 cut(s)	323, 504, 683, 824, 951, 989, 1392
TauI	GCSGC	3 cut(s)	225, 247, 307
TfiI	GAWTC	8 cut(s)	61, 67, 470, 878, 1247, 1286, 1424, 1513
Tru1I	TTAA	5 cut(s)	458, 531, 788, 1296, 1476
Tru9I	TTAA	5 cut(s)	458, 531, 788, 1296, 1476
TscAI	CASTG	5 cut(s)	134, 493, 706, 769, 1321
TseFI	GTSAC	3 cut(s)	478, 650, 862
TseI	GCWGC	6 cut(s)	247, 319, 902, 905, 1004, 1125
Tsp45I	GTSAC	3 cut(s)	478, 650, 862
TspDTI	ATGAA	9 cut(s)	346, 411, 549, 918, 989, 999, 1086, 1239, 1452
TspRI	CASTG	5 cut(s)	134, 493, 706, 769, 1321
Tth111I	GACNNNGTC	1 cut(s)	774
VneI	GTGCAC	1 cut(s)	1320
VpaK11BI	GGWCC	2 cut(s)	337, 959
XceI	RCATGY	1 cut(s)	785
XcmI	CCANNNNNNNNNTGG	1 cut(s)	78
XmnI	GAANNNNTTC	1 cut(s)	946
XspI	CTAG	2 cut(s)	285, 1373
ZraI	GACGTC	1 cut(s)	157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.