Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0008574

Physical Location & Seq

Genomic Coordinates Reverse (-)

39472876 .. 39482254

Gene Structure 9379 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00030120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGTAATACTAATGAAGAAAGTTATCCATGAGAAGATTCTTGTTAGAATAACTGTCAGGAGTTCTGGAATGTATATTTGGATTGCTTTTGAATGGTTGGCACTCCTGAAGTCAAATGAAGTTCATTCAGAGGAGAATAAAACTTCCTTTGATAATAAGAAAAGAGTACTCAAGACACCAGCCCAGCTTATGGCTTTGGAGAAATTTTATAATGAGCATAAGTATCCTACAGAGGAAATGAAATCACAACTCGCTGAGGAGTTGGGATTGTCAGAAAAGCAGATCTCTGGATGGTTTTGCCACAGAAGGTTAAAAGACAAAAGATTGTCTAGAGATGAAACATATGCTAATGGACGGCAAGATCGTTCAAGTGGTGTTATTCAGGATCGCGCTAGTGGACTTGGGCAAGACTCATGTGGTAGCACTAAACATGGAGACTACAGGTACGTTGATCCTAGGGAGGTTGAAAGTCGGAGGCTTTCTGGGTATGATTTCCCACCCGCAGATCTCACTCGTGAGCATCGGATTCATTATACAGAAAGAGTTAGCATGGATAATACGTCTTCAGAAAGTAGCTCATCTTTACAAGATAGGTTTCTTACTCAAACTGAAGATCCATATGATATGGAAACATCTAGATACGTAACAGATAATGGGGTCTTTTCACCCTTAAATACGAAAGGCGCAGAAAACATGGGATATAAGCCCTCAGGGTATTTGAAAGTCAAAGGCGAAATAGAAAATGCTGCTATTACAGCTGTTAAGAGGCAACTTGGGAGGCATTTTCGGGAGGATGGTCCTCCATTAGGTGTAGAATTTGATCCACTTCCTCCTGGTGCATTTGAATCCCCGATTATGGATCCAGTGCAAGGCCCCCAAAGATGGAAATATGAGGACCTGACATGTGGGATATGGCTGTTGAAAAGGAATATAAATGATGCTTGTAATGGGGGAACTATCTTCGATGTCATGTTTTCTGGAAATCCTTGCTTCCATACTGCTACAGGAGAATGCAAGAAGATGGAGGCTAGAATCTTCCAGGTGTTTTTGTGTAATTCCGAGTTCTTTCTGAGTGTTTTTCTCAGTGAGGATTCTGATTTGCTACATTTGTACCCTCTGAACCATCAATTGGTGGGGATGCTGCTGGTCTTGATTCCCCCTGACACATCTGGAGTAAAAAGGCAATCAAGTCCAAGCACTAGATATGAAGTATATAATTCCAAGTTGAGCTCCCAGGGTTTGTATATGCACCAGGAAAATCGTGGTATAATGCATGGGGTTGATATGGTGGAGAGGAAATCTCGCAAGCAATTGAGGCAAAAGTCCACTTATCTTAAAGATATCAATTCTTCTGCTGGCAAAAACTCTTCCTTGGATATGTATGATGCATTTCCTGGAGGAATGTCTGCTTATAATGGCAATAGGAAGAACAGAATGAGCTCTAAGCATGGCCACCGTGGTAGGAAAATCACTAGTGAGACAACAGAGCCATGGTCAAATGAGTCTGATAAAGTTTGTAGCCCCAACATTGGCCAAAGAAGCGATTACTTTAAGTCAAAGGCTTTAAATTCTGTAGTTAAGCATTCCGAAACTCATGACACAGAGAGAGGACTATTTACGATGACCCCACGGGAGGAGAAAGTTGATGGAGAATGTAAGGCAGTCAAAGATTATCACAATCCACTTAGAGTAACGATGACAGATGAAATGACGGTTGGAAAACAAGGCAGAGTTAATTTCCCTCACCAAGACTATGCAACAAGTGTGCCGTTTTCTCAAATTCCAGAGCGTAAAAATCAGATTAAAGGAACTGCCATGGAGATGCCATCTAGCTTCAGTGAGGATGAGACTGCAGAAACAAACTCTTCGGTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

625

Amino Acids

71.15

Weight (kDa)

7.29

Isoelectric Point (pI)

54.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	53 - 108	1.9e-17	Homeodomain
Homeobox_KN	PF05920	73 - 103	2.1e-07	Homeobox KN domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008574)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03250
fragaria_vesca	FvH4_3g27990 FvH4_3g27990 FvH4_3g27990 FvH4_3g27990
malus_domestica	MD03G1167600.v1.1 MD11G1186500.v1.1
prunus_persica	Prupe.4G267700_v2.0.a1 Prupe.4G267700_v2.0.a1
pyrus_communis	pycom03g12280 pycom11g16120
rosa_chinensis	RchiOBHm_Chr5g0050681
rosa_laevigata	RLG00000034723
rosa_multiflora	Rmu_sc0007911.1_g000002 Rmu_ssc0000350.1_g000043
rosa_roxburghii	Rroxscaffold_1G00030120
rosa_rugosa	Rorug05G0263100 Rorug05G0263200
rosa_samantha	Rh5AG335000 Rh5BG344300 Rh5CG372400 Rh5DG357500
rosa_wichuraiana	Rw5G031610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	210, 1413
AccB7I	CCANNNNNTGG	2 cut(s)	190, 1129
AccII	CGCG	1 cut(s)	390
AciI	CCGC	1 cut(s)	501
AclWI	GGATC	6 cut(s)	393, 446, 608, 815, 854, 867
AcoI	YGGCCR	2 cut(s)	1450, 1531
AcsI	RAATTY	4 cut(s)	203, 815, 1567, 1779
AcuI	CTGAAG	4 cut(s)	128, 549, 630, 1819
AfaI	GTAC	3 cut(s)	168, 446, 1112
AfiI	CCNNNNNNNGG	8 cut(s)	190, 806, 856, 869, 882, 1129, 1529, 1633
AflIII	ACRYGT	1 cut(s)	902
AgsI	TTSAA	6 cut(s)	92, 369, 467, 721, 845, 922
AhlI	ACTAGT	1 cut(s)	1472
AjnI	CCWGG	5 cut(s)	832, 1038, 1233, 1251, 1393
AjuI	GAANNNNNNNTTGG	6 cut(s)	61, 93, 1112, 1144, 1698, 1730
AluBI	AGCT	6 cut(s)	187, 576, 758, 1230, 1440, 1833
AluI	AGCT	6 cut(s)	187, 576, 758, 1230, 1440, 1833
Alw21I	GWGCWC	2 cut(s)	1232, 1442
Alw26I	GTCTC	3 cut(s)	429, 1472, 1841
AlwI	GGATC	6 cut(s)	393, 446, 608, 815, 854, 867
AoxI	GGCC	3 cut(s)	871, 1450, 1531
ApeKI	GCWGC	2 cut(s)	746, 1141
ApoI	RAATTY	4 cut(s)	203, 815, 1567, 1779
AspA2I	CCTAGG	1 cut(s)	455
AspLEI	GCGC	2 cut(s)	392, 686
AspS9I	GGNCC	3 cut(s)	797, 872, 895
AsuHPI	GGTGA	2 cut(s)	657, 1736
AvaII	GGWCC	2 cut(s)	797, 895
AvrII	CCTAGG	1 cut(s)	455
AxyI	CCTNAGG	1 cut(s)	709
BaeI	ACNNNNGTAYC	2 cut(s)	1094, 1127
BalI	TGGCCA	2 cut(s)	1452, 1533
BamHI	GGATCC	1 cut(s)	859
BanII	GRGCYC	2 cut(s)	1232, 1442
BauI	CACGAG	1 cut(s)	513
BbsI	GAAGAC	1 cut(s)	555
Bbv12I	GWGCWC	2 cut(s)	1232, 1442
BbvCI	CCTCAGC	1 cut(s)	255
BbvI	GCAGC	2 cut(s)	733, 1128
BccI	CCATC	7 cut(s)	285, 788, 876, 1015, 1131, 1640, 1834
BceAI	ACGGC	2 cut(s)	371, 1753
BciT130I	CCWGG	5 cut(s)	834, 1040, 1235, 1253, 1395
BciVI	GTATCC	1 cut(s)	234
BcoDI	GTCTC	3 cut(s)	429, 1472, 1841
BcuI	ACTAGT	1 cut(s)	1472
BfaI	CTAG	8 cut(s)	330, 393, 456, 636, 1029, 1200, 1473, 1830
BfmI	CTRYAG	5 cut(s)	228, 439, 1002, 1572, 1851
BfuI	GTATCC	1 cut(s)	234
BglII	AGATCT	2 cut(s)	282, 505
BisI	GCNGC	2 cut(s)	747, 1142
BlnI	CCTAGG	1 cut(s)	455
BlsI	GCNGC	2 cut(s)	748, 1143
BmcAI	AGTACT	1 cut(s)	168
Bme1390I	CCNGG	5 cut(s)	834, 1040, 1235, 1253, 1395
Bme18I	GGWCC	2 cut(s)	797, 895
BmgT120I	GGNCC	3 cut(s)	797, 872, 895
BmiI	GGNNCC	2 cut(s)	861, 874
BmrFI	CCNGG	5 cut(s)	834, 1040, 1235, 1253, 1395
BmsI	GCATC	5 cut(s)	529, 928, 1128, 1375, 1812
BpiI	GAAGAC	1 cut(s)	555
BplI	GAGNNNNNCTC	2 cut(s)	1285, 1317
BpmI	CTGGAG	2 cut(s)	1191, 1416
Bpu10I	CCTNAGC	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	155
BsaAI	YACGTR	1 cut(s)	643
BsaJI	CCNNGG	8 cut(s)	455, 1233, 1234, 1371, 1456, 1490, 1628, 1815
Bsc4I	CCNNNNNNNGG	8 cut(s)	190, 806, 856, 869, 882, 1129, 1529, 1633
Bse1I	ACTGG	1 cut(s)	863
Bse21I	CCTNAGG	1 cut(s)	709
BseBI	CCWGG	5 cut(s)	834, 1040, 1235, 1253, 1395
BseDI	CCNNGG	8 cut(s)	455, 1233, 1234, 1371, 1456, 1490, 1628, 1815
BseGI	GGATG	4 cut(s)	296, 799, 1143, 1849
BseLI	CCNNNNNNNGG	8 cut(s)	190, 806, 856, 869, 882, 1129, 1529, 1633
BseMII	CTCAG	4 cut(s)	246, 723, 1061, 1096
BseNI	ACTGG	1 cut(s)	863
BseRI	GAGGAG	3 cut(s)	146, 272, 1649
BseXI	GCAGC	2 cut(s)	733, 1128
BseYI	CCCAGC	1 cut(s)	183
Bsh1236I	CGCG	1 cut(s)	390
BshFI	GGCC	3 cut(s)	873, 1452, 1533
BsiHKAI	GWGCWC	2 cut(s)	1232, 1442
BslI	CCNNNNNNNGG	8 cut(s)	190, 806, 856, 869, 882, 1129, 1529, 1633
BsmAI	GTCTC	3 cut(s)	429, 1472, 1841
BsmI	GAATGC	2 cut(s)	1016, 1582
BsnI	GGCC	3 cut(s)	873, 1452, 1533
Bsp1286I	GDGCHC	2 cut(s)	1232, 1442
Bsp143I	GATC	8 cut(s)	282, 361, 385, 451, 505, 613, 820, 859
Bsp19I	CCATGG	2 cut(s)	1490, 1815
BspACI	CCGC	1 cut(s)	501
BspANI	GGCC	3 cut(s)	873, 1452, 1533
BspCNI	CTCAG	4 cut(s)	247, 722, 1062, 1095
BspFNI	CGCG	1 cut(s)	390
BspHI	TCATGA	1 cut(s)	1594
BspLI	GGNNCC	2 cut(s)	861, 874
BspMAI	CTGCAG	1 cut(s)	1855
BspPI	GGATC	6 cut(s)	393, 446, 608, 815, 854, 867
BsrI	ACTGG	1 cut(s)	863
BssECI	CCNNGG	8 cut(s)	455, 1233, 1234, 1371, 1456, 1490, 1628, 1815
BssMI	GATC	8 cut(s)	282, 361, 385, 451, 505, 613, 820, 859
BssSI	CACGAG	1 cut(s)	513
BssT1I	CCWWGG	4 cut(s)	455, 1371, 1490, 1815
Bst2BI	CACGAG	1 cut(s)	513
Bst2UI	CCWGG	5 cut(s)	834, 1040, 1235, 1253, 1395
Bst4CI	ACNGT	3 cut(s)	55, 1457, 1714
Bst6I	CTCTTC	2 cut(s)	1372, 1870
BstBAI	YACGTR	1 cut(s)	643
BstC8I	GCNNGC	2 cut(s)	1307, 1357
BstDEI	CTNAG	6 cut(s)	255, 709, 1070, 1082, 1443, 1685
BstDSI	CCRYGG	4 cut(s)	1456, 1490, 1628, 1815
BstENI	CCTNNNNNAGG	1 cut(s)	804
BstF5I	GGATG	4 cut(s)	296, 799, 1143, 1849
BstFNI	CGCG	1 cut(s)	390
BstHHI	GCGC	2 cut(s)	392, 686
BstKTI	GATC	8 cut(s)	285, 364, 388, 454, 508, 616, 823, 862
BstMAI	GTCTC	3 cut(s)	429, 1472, 1841
BstMBI	GATC	8 cut(s)	282, 361, 385, 451, 505, 613, 820, 859
BstMWI	GCNNNNNNNGC	3 cut(s)	755, 1315, 1539
BstNI	CCWGG	5 cut(s)	834, 1040, 1235, 1253, 1395
BstNSI	RCATGY	1 cut(s)	906
BstSCI	CCNGG	5 cut(s)	832, 1038, 1233, 1251, 1393
BstSFI	CTRYAG	5 cut(s)	228, 439, 1002, 1572, 1851
BstSNI	TACGTA	1 cut(s)	643
BstUI	CGCG	1 cut(s)	390
BstV1I	GCAGC	2 cut(s)	733, 1128
BstV2I	GAAGAC	1 cut(s)	555
BstX2I	RGATCY	4 cut(s)	282, 505, 613, 859
BstYI	RGATCY	4 cut(s)	282, 505, 613, 859
Bsu36I	CCTNAGG	1 cut(s)	709
BsuI	GTATCC	1 cut(s)	234
BsuRI	GGCC	3 cut(s)	873, 1452, 1533
BtgI	CCRYGG	4 cut(s)	1456, 1490, 1628, 1815
BtsCI	GGATG	4 cut(s)	296, 799, 1143, 1849
BtsIMutI	CAGTG	3 cut(s)	870, 1090, 1843
Cac8I	GCNNGC	2 cut(s)	1307, 1357
CciI	TCATGA	1 cut(s)	1594
CfoI	GCGC	2 cut(s)	392, 686
Cfr13I	GGNCC	3 cut(s)	797, 872, 895
Csp6I	GTAC	3 cut(s)	167, 445, 1111
CviQI	GTAC	3 cut(s)	167, 445, 1111
DdeI	CTNAG	6 cut(s)	255, 709, 1070, 1082, 1443, 1685
DpnI	GATC	8 cut(s)	284, 363, 387, 453, 507, 615, 822, 861
DpnII	GATC	8 cut(s)	282, 361, 385, 451, 505, 613, 820, 859
DraI	TTTAAA	1 cut(s)	1566
EaeI	YGGCCR	2 cut(s)	1450, 1531
Eam1104I	CTCTTC	2 cut(s)	1372, 1870
EarI	CTCTTC	2 cut(s)	1372, 1870
Ecl136II	GAGCTC	2 cut(s)	1230, 1440
Eco105I	TACGTA	1 cut(s)	643
Eco130I	CCWWGG	4 cut(s)	455, 1371, 1490, 1815
Eco24I	GRGCYC	2 cut(s)	1232, 1442
Eco32I	GATATC	1 cut(s)	1342
Eco47I	GGWCC	2 cut(s)	797, 895
Eco53kI	GAGCTC	2 cut(s)	1230, 1440
Eco57I	CTGAAG	4 cut(s)	128, 549, 630, 1819
Eco81I	CCTNAGG	1 cut(s)	709
EcoICRI	GAGCTC	2 cut(s)	1230, 1440
EcoNI	CCTNNNNNAGG	1 cut(s)	804
EcoO109I	RGGNCCY	2 cut(s)	872, 895
EcoRII	CCWGG	5 cut(s)	832, 1038, 1233, 1251, 1393
EcoRV	GATATC	1 cut(s)	1342
EcoT14I	CCWWGG	4 cut(s)	455, 1371, 1490, 1815
EcoT22I	ATGCAT	2 cut(s)	1275, 1390
EcoT38I	GRGCYC	2 cut(s)	1232, 1442
ErhI	CCWWGG	4 cut(s)	455, 1371, 1490, 1815
FauI	CCCGC	1 cut(s)	508
FauNDI	CATATG	2 cut(s)	343, 619
Fnu4HI	GCNGC	2 cut(s)	747, 1142
FokI	GGATG	4 cut(s)	303, 806, 1150, 1856
FriOI	GRGCYC	2 cut(s)	1232, 1442
Fsp4HI	GCNGC	2 cut(s)	747, 1142
FspBI	CTAG	8 cut(s)	330, 393, 456, 636, 1029, 1200, 1473, 1830
GlaI	GCGC	2 cut(s)	391, 685
GluI	GCNGC	2 cut(s)	747, 1142
GsaI	CCCAGC	1 cut(s)	187
GsuI	CTGGAG	2 cut(s)	1191, 1416
HaeIII	GGCC	3 cut(s)	873, 1452, 1533
HhaI	GCGC	2 cut(s)	392, 686
Hin6I	GCGC	2 cut(s)	390, 684
HinP1I	GCGC	2 cut(s)	390, 684
HinfI	GANTC	8 cut(s)	37, 410, 526, 845, 1032, 1091, 1153, 1502
HphI	GGTGA	2 cut(s)	657, 1736
Hpy166II	GTNNAC	2 cut(s)	398, 1326
Hpy8I	GTNNAC	2 cut(s)	398, 1326
HpyAV	CCTTC	1 cut(s)	300
HpyCH4III	ACNGT	3 cut(s)	55, 1457, 1714
HpyCH4IV	ACGT	3 cut(s)	447, 560, 642
HpyCH4V	TGCA	8 cut(s)	839, 868, 1014, 1249, 1273, 1388, 1757, 1853
HpyF10VI	GCNNNNNNNGC	3 cut(s)	755, 1315, 1539
HpyF3I	CTNAG	6 cut(s)	255, 709, 1070, 1082, 1443, 1685
HpySE526I	ACGT	3 cut(s)	447, 560, 642
HspAI	GCGC	2 cut(s)	390, 684
Kzo9I	GATC	8 cut(s)	282, 361, 385, 451, 505, 613, 820, 859
LmnI	GCTCC	1 cut(s)	1235
Lsp1109I	GCAGC	2 cut(s)	733, 1128
LweI	GCATC	5 cut(s)	529, 928, 1128, 1375, 1812
MaeI	CTAG	8 cut(s)	330, 393, 456, 636, 1029, 1200, 1473, 1830
MaeII	ACGT	3 cut(s)	447, 560, 642
MaeIII	GTNAC	2 cut(s)	643, 1690
MalI	GATC	8 cut(s)	284, 363, 387, 453, 507, 615, 822, 861
MboI	GATC	8 cut(s)	282, 361, 385, 451, 505, 613, 820, 859
MfeI	CAATTG	2 cut(s)	1127, 1310
MflI	RGATCY	4 cut(s)	282, 505, 613, 859
MhlI	GDGCHC	2 cut(s)	1232, 1442
MlsI	TGGCCA	2 cut(s)	1452, 1533
MluNI	TGGCCA	2 cut(s)	1452, 1533
MlyI	GAGTC	2 cut(s)	404, 1511
MmeI	TCCRAC	2 cut(s)	452, 1696
Mox20I	TGGCCA	2 cut(s)	1452, 1533
Mph1103I	ATGCAT	2 cut(s)	1275, 1390
MscI	TGGCCA	2 cut(s)	1452, 1533
MseI	TTAA	9 cut(s)	311, 671, 762, 1335, 1551, 1565, 1578, 1734, 1803
MslI	CAYNNNNRTG	1 cut(s)	1820
Msp20I	TGGCCA	2 cut(s)	1452, 1533
MspA1I	CMGCKG	1 cut(s)	758
MspR9I	CCNGG	5 cut(s)	834, 1040, 1235, 1253, 1395
MunI	CAATTG	2 cut(s)	1127, 1310
Mva1269I	GAATGC	2 cut(s)	1016, 1582
MvaI	CCWGG	5 cut(s)	834, 1040, 1235, 1253, 1395
MvnI	CGCG	1 cut(s)	390
MwoI	GCNNNNNNNGC	3 cut(s)	755, 1315, 1539
NcoI	CCATGG	2 cut(s)	1490, 1815
NdeI	CATATG	2 cut(s)	343, 619
NdeII	GATC	8 cut(s)	282, 361, 385, 451, 505, 613, 820, 859
NlaIV	GGNNCC	2 cut(s)	861, 874
NsiI	ATGCAT	2 cut(s)	1275, 1390
NspI	RCATGY	1 cut(s)	906
PagI	TCATGA	1 cut(s)	1594
PasI	CCCWGGG	1 cut(s)	1234
PciI	ACATGT	1 cut(s)	902
PcsI	WCGNNNNNNNCGW	1 cut(s)	361
PctI	GAATGC	2 cut(s)	1016, 1582
PfeI	GAWTC	6 cut(s)	37, 526, 845, 1032, 1091, 1153
PflMI	CCANNNNNTGG	2 cut(s)	190, 1129
PfoI	TCCNGGA	1 cut(s)	1393
PkrI	GCNGC	2 cut(s)	748, 1143
PleI	GAGTC	2 cut(s)	404, 1510
PpsI	GAGTC	2 cut(s)	404, 1510
Ppu21I	YACGTR	1 cut(s)	643
PpuMI	RGGWCCY	1 cut(s)	895
PscI	ACATGT	1 cut(s)	902
PsiI	TTATAA	2 cut(s)	210, 1413
Psp124BI	GAGCTC	2 cut(s)	1232, 1442
Psp5II	RGGWCCY	1 cut(s)	895
Psp6I	CCWGG	5 cut(s)	832, 1038, 1233, 1251, 1393
PspFI	CCCAGC	1 cut(s)	183
PspGI	CCWGG	5 cut(s)	832, 1038, 1233, 1251, 1393
PspN4I	GGNNCC	2 cut(s)	861, 874
PspPI	GGNCC	3 cut(s)	797, 872, 895
PspPPI	RGGWCCY	1 cut(s)	895
PstI	CTGCAG	1 cut(s)	1855
PsuI	RGATCY	4 cut(s)	282, 505, 613, 859
PvuII	CAGCTG	1 cut(s)	758
RsaI	GTAC	3 cut(s)	168, 446, 1112
RsaNI	GTAC	3 cut(s)	167, 445, 1111
RseI	CAYNNNNRTG	1 cut(s)	1820
SacI	GAGCTC	2 cut(s)	1232, 1442
SaqAI	TTAA	9 cut(s)	311, 671, 762, 1335, 1551, 1565, 1578, 1734, 1803
SatI	GCNGC	2 cut(s)	747, 1142
Sau3AI	GATC	8 cut(s)	282, 361, 385, 451, 505, 613, 820, 859
Sau96I	GGNCC	3 cut(s)	797, 872, 895
ScaI	AGTACT	1 cut(s)	168
SchI	GAGTC	2 cut(s)	404, 1511
ScrFI	CCNGG	5 cut(s)	834, 1040, 1235, 1253, 1395
SduI	GDGCHC	2 cut(s)	1232, 1442
SfaNI	GCATC	5 cut(s)	529, 928, 1128, 1375, 1812
SfcI	CTRYAG	5 cut(s)	228, 439, 1002, 1572, 1851
SinI	GGWCC	2 cut(s)	797, 895
SmiMI	CAYNNNNRTG	1 cut(s)	1820
SmlI	CTYRAG	1 cut(s)	170
SmoI	CTYRAG	1 cut(s)	170
SnaBI	TACGTA	1 cut(s)	643
SpeI	ACTAGT	1 cut(s)	1472
SsiI	CCGC	1 cut(s)	501
SspMI	CTAG	8 cut(s)	330, 393, 456, 636, 1029, 1200, 1473, 1830
SstI	GAGCTC	2 cut(s)	1232, 1442
StyD4I	CCNGG	5 cut(s)	832, 1038, 1233, 1251, 1393
StyI	CCWWGG	4 cut(s)	455, 1371, 1490, 1815
TaaI	ACNGT	3 cut(s)	55, 1457, 1714
TaiI	ACGT	3 cut(s)	450, 563, 645
TaqI	TCGA	1 cut(s)	963
TatI	WGTACW	1 cut(s)	166
TfiI	GAWTC	6 cut(s)	37, 526, 845, 1032, 1091, 1153
Tru1I	TTAA	9 cut(s)	311, 671, 762, 1335, 1551, 1565, 1578, 1734, 1803
Tru9I	TTAA	9 cut(s)	311, 671, 762, 1335, 1551, 1565, 1578, 1734, 1803
TscAI	CASTG	3 cut(s)	870, 1090, 1843
TseI	GCWGC	2 cut(s)	746, 1141
TspDTI	ATGAA	8 cut(s)	29, 113, 132, 254, 351, 518, 1221, 1719
TspRI	CASTG	3 cut(s)	870, 1090, 1843
Van91I	CCANNNNNTGG	2 cut(s)	190, 1129
VpaK11BI	GGWCC	2 cut(s)	797, 895
XagI	CCTNNNNNAGG	1 cut(s)	804
XapI	RAATTY	4 cut(s)	203, 815, 1567, 1779
XbaI	TCTAGA	2 cut(s)	329, 635
XceI	RCATGY	1 cut(s)	906
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1259
XmaJI	CCTAGG	1 cut(s)	455
XspI	CTAG	8 cut(s)	330, 393, 456, 636, 1029, 1200, 1473, 1830
ZrmI	AGTACT	1 cut(s)	168
Zsp2I	ATGCAT	2 cut(s)	1275, 1390

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.