Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0007428

Physical Location & Seq

Genomic Coordinates Reverse (-)

70126474 .. 70131275

Gene Structure 4802 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00049780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGCCCAAATCGAAACCCAGGGCATACTCCAGGACATCGAAACCCTCGTCTCCGATCAGCTTCAAGTGGTTTCGTACAAATGGCTGAGTCGGAATTACTTGGTGTCGTCCAATGATGCAAAGAGGTTGCTCCAGGAGTTTGTGGAAGACCATGGAAACGGTTTGGAGGTGGTATATACTTTGTCTGGCCAGTTGAAGAACAATCCTGTGAGCTACCATGTAAAGCTTGTTTCGGCGCCTCAACTTGCAGAAGCAAAAGAAGAATTTGATGGCAACTGCTCCGTTGGGGTTTACAGTGTGCAACCTTGCATTCCAAAGGATCCAGCTACAATTTGGAATGCAGAATTTGTACAAGCAGAGGAGCTCCATACGCAGGCTCCAACAGTTGAAAATTGCTTGAGAGATAACAGGTTCTGCGGCATTCTCAATTCCTTTGTTTTGCGTAATGTAGAGGGAACACCATTGAGCACTGCAGGTCCACAACTGAAGACCAAATTAGCTGCAGAGCCATCAAAAATTAATTTAGCTCATCAAGATAGTGTGATTTTAAAACAGCAACAGAATAAAGGAGAACAATCTAGTCCGAAAGTTGGTTTGCCGGCTCCCAATGTGGTAAAAGATGTTAAAAGTGAAAGCAATGGCATAGGAGTTACTCATCAGCCTAACAAACATCCTGCAGACAAAGAGAAAGTTGCTCCTCTTCCTGCTAACAAAAAGAAGGTCCAGAGTGATAAAAGCTCTTCTGTTTCTGGAGGCTCATTGGCAAATTTGTGGGGTCGTGCATCTGTGAAATCCAAGTCAAATTCTACAGCCGAAAATAGTAATTTGATTCCTACGCATACTGGAGCAAGTGCAGAGGCTCAAATTTGTGCTAGAGAAGCAGAAACTGGTGTCATCAGCGACGATGATGATCAAGATGTTAATTTTAAGAGAGCTTCCAGTTCTGAAGTCACTAGGAAACGGAGGGTTGTCTTTGATTTCTCCGATGAAGACGAATGTGAAGATGCAGTCAATTTAGCATCACCAGAGTATCCAAAAGGAAAATCATGTCAAGAGCTCAAAGAAAGTAGCAAAACTTTGGTTCCACATAAAACCAATTTGAACTTTGACGAGCAGGTAGAAGATAAACCAGAGGTCAAGGAAGAGATATCAGTTGACGGAAAATCTGACCCACCTTGCAGAGAAGATTCTACCGTTGTCAGCAAGGAAAGGAATTCTGGGATTATCCTGTCAGAGAAAACAGACAGATCTGTTCCTGAAAAAGATGTGAACAAAATGGATAAGCTGGCCACTGCTGCTAAAACACAGATAGATGCTGGGATTATCCTAACTGAGAAAAAACGTAACTCTGTGCCTGAAAAAGATGTGAACAAAATGGATAAACCGACCAACGGTGCATCAAGATCTCCTCAAAGAAGAAAAATTTTGAAGACGCAGATTGATGAACGTGGAAGAGAAGTAACTGAGGTAATATGGGAGGGCAAGGAGACAGAAGCAAAGAAAGCTGACAGCAGTGCAACAATGAAAGCTGACTGCAGTACAACAAAGAAAGCTGATAATACAGTTACCAGTGTTACGAACAGGCCTGCCGCAGCTCAGAAGTCAGTGGCGAACACTGGTCCGAAAAATCAAACTACCAAATCAGGAGGCAAGAAAGCAGTAAACAAGGATCCTAAGCAAGGAAATATTCTTTCATTCTTCAAGAAGGTTTTTGAGTTGCTTAAATCTTTGCTTTGCCTTGTGTCTGGAGGGGAGTCGCAGAATTCGGGTTTAGGGTACATTGCTCTTACATCTTGTTATTTTCAGATGATGGAGACTGGAGAGTGTTTGCTTTTCTTCTCTGCTGTTAGTTTAAGGCTCCAAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006289 GO:0006297 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 ko03410 ko03420 ko03430 ko03440 ko05166 map00230 map00240 map01100 map03030 map03410 map03420 map03430 map03440 map05166

Pfam Domains

Protein Families

CDC27

Protein Analysis

622

Amino Acids

67.94

Weight (kDa)

6.75

Isoelectric Point (pI)

45.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CDC27	PF09507	23 - 379	1.4e-13	DNA polymerase subunit Cdc27

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007428)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78650
fragaria_vesca	FvH4_3g18120 FvH4_3g18120
malus_domestica	MD03G1244500.v1.1 MD03G1244600.v1.1 MD11G1266100.v1.1
prunus_persica	Prupe.4G160000_v2.0.a1
pyrus_communis	pycom03g19400 pycom11g23420
rosa_chinensis	RchiOBHm_Chr5g0030181 RchiOBHm_Chr5g0030251 RchiOBHm_Chr5g0030351 RchiOBHm_Chr5g0030441 RchiOBHm_Chr5g0030521
rosa_laevigata	RLG00000033222
rosa_multiflora	Rmu_sc0013101.1_g000006 Rmu_sc0036102.1_g000002
rosa_roxburghii	Rroxscaffold_1G00049780
rosa_rugosa	Rorug05G0118200
rosa_samantha	Rh5AG210400 Rh5BG209600 Rh5CG233000 Rh5DG213800 Rh5DG214100
rosa_wichuraiana	Rw5G019220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	464, 1105
AccB1I	GGYRCC	1 cut(s)	235
AciI	CCGC	2 cut(s)	417, 1590
AclWI	GGATC	4 cut(s)	314, 327, 1664, 1677
AcoI	YGGCCR	2 cut(s)	187, 1287
AcsI	RAATTY	8 cut(s)	263, 344, 766, 802, 864, 1213, 1422, 1762
AcuI	CTGAAG	2 cut(s)	506, 966
AcyI	GRCGYC	1 cut(s)	236
AfaI	GTAC	4 cut(s)	77, 351, 1540, 1778
AfiI	CCNNNNNNNGG	4 cut(s)	373, 590, 1391, 1679
AgsI	TTSAA	6 cut(s)	65, 196, 389, 1102, 1429, 1702
AjnI	CCWGG	3 cut(s)	18, 30, 132
Alw21I	GWGCWC	3 cut(s)	366, 470, 1059
Alw26I	GTCTC	3 cut(s)	55, 1481, 1808
AlwI	GGATC	4 cut(s)	314, 327, 1664, 1677
AlwNI	CAGNNNCTG	2 cut(s)	414, 887
AoxI	GGCC	4 cut(s)	3, 187, 1287, 1583
ApeKI	GCWGC	3 cut(s)	500, 1295, 1592
ApoI	RAATTY	8 cut(s)	263, 344, 766, 802, 864, 1213, 1422, 1762
ArsI	GACNNNNNNTTYG	4 cut(s)	33, 65, 705, 737
AseI	ATTAAT	1 cut(s)	519
AspLEI	GCGC	1 cut(s)	238
AspS9I	GGNCC	4 cut(s)	4, 476, 721, 1619
AsuHPI	GGTGA	1 cut(s)	1014
AvaII	GGWCC	3 cut(s)	476, 721, 1619
BaeI	ACNNNNGTAYC	2 cut(s)	1013, 1046
BalI	TGGCCA	2 cut(s)	189, 1289
BamHI	GGATCC	2 cut(s)	319, 1669
BanI	GGYRCC	1 cut(s)	235
BanII	GRGCYC	2 cut(s)	366, 1059
BbsI	GAAGAC	4 cut(s)	153, 494, 996, 1436
Bbv12I	GWGCWC	3 cut(s)	366, 470, 1059
BbvI	GCAGC	3 cut(s)	487, 1282, 1604
BccI	CCATC	3 cut(s)	263, 517, 1804
BciT130I	CCWGG	3 cut(s)	20, 32, 134
BciVI	GTATCC	1 cut(s)	1041
BclI	TGATCA	1 cut(s)	910
BcoDI	GTCTC	3 cut(s)	55, 1481, 1808
BfaI	CTAG	3 cut(s)	579, 873, 954
BfmI	CTRYAG	5 cut(s)	471, 501, 675, 807, 1534
BfoI	RGCGCY	1 cut(s)	239
BfuAI	ACCTGC	2 cut(s)	464, 1105
BfuI	GTATCC	1 cut(s)	1041
BglII	AGATCT	2 cut(s)	1247, 1403
BisI	GCNGC	5 cut(s)	418, 501, 1296, 1590, 1593
BlsI	GCNGC	5 cut(s)	419, 502, 1297, 1591, 1594
Bme1390I	CCNGG	3 cut(s)	20, 32, 134
Bme18I	GGWCC	3 cut(s)	476, 721, 1619
BmgT120I	GGNCC	4 cut(s)	4, 476, 721, 1619
BmiI	GGNNCC	7 cut(s)	237, 321, 378, 603, 1083, 1671, 1859
BmrFI	CCNGG	3 cut(s)	20, 32, 134
BmsI	GCATC	6 cut(s)	106, 791, 994, 1028, 1303, 1406
BpiI	GAAGAC	4 cut(s)	153, 494, 996, 1436
BpmI	CTGGAG	6 cut(s)	14, 116, 771, 864, 1767, 1839
Bpu10I	CCTNAGC	1 cut(s)	1674
BpuEI	CTTGAG	1 cut(s)	418
BsaBI	GATNNNNATC	1 cut(s)	909
BsaHI	GRCGYC	1 cut(s)	236
BsaJI	CCNNGG	3 cut(s)	18, 19, 151
BsaXI	ACNNNNNCTCC	2 cut(s)	361, 391
Bsc4I	CCNNNNNNNGG	4 cut(s)	373, 590, 1391, 1679
Bse118I	RCCGGY	1 cut(s)	598
Bse1I	ACTGG	7 cut(s)	190, 847, 892, 939, 1569, 1621, 1822
Bse3DI	GCAATG	2 cut(s)	643, 1779
Bse8I	GATNNNNATC	1 cut(s)	909
BseBI	CCWGG	3 cut(s)	20, 32, 134
BseDI	CCNNGG	3 cut(s)	18, 19, 151
BseGI	GGATG	1 cut(s)	670
BseJI	GATNNNNATC	1 cut(s)	909
BseLI	CCNNNNNNNGG	4 cut(s)	373, 590, 1391, 1679
BseMI	GCAATG	2 cut(s)	643, 1779
BseMII	CTCAG	4 cut(s)	77, 1323, 1455, 1610
BseNI	ACTGG	7 cut(s)	190, 847, 892, 939, 1569, 1621, 1822
BseRI	GAGGAG	3 cut(s)	374, 687, 1398
BseXI	GCAGC	3 cut(s)	487, 1282, 1604
BseYI	CCCAGC	1 cut(s)	1316
BsgI	GTGCAG	1 cut(s)	873
BshFI	GGCC	4 cut(s)	5, 189, 1289, 1585
BshNI	GGYRCC	1 cut(s)	235
BsiHKAI	GWGCWC	3 cut(s)	366, 470, 1059
BsiSI	CCGG	1 cut(s)	599
BslI	CCNNNNNNNGG	4 cut(s)	373, 590, 1391, 1679
BsmAI	GTCTC	3 cut(s)	55, 1481, 1808
BsmBI	CGTCTC	1 cut(s)	55
BsmI	GAATGC	3 cut(s)	309, 343, 420
BsnI	GGCC	4 cut(s)	5, 189, 1289, 1585
Bsp1286I	GDGCHC	3 cut(s)	366, 470, 1059
Bsp1407I	TGTACA	1 cut(s)	349
Bsp143I	GATC	6 cut(s)	55, 319, 910, 1247, 1403, 1669
Bsp19I	CCATGG	1 cut(s)	151
BspACI	CCGC	2 cut(s)	417, 1590
BspANI	GGCC	4 cut(s)	5, 189, 1289, 1585
BspCNI	CTCAG	4 cut(s)	78, 1324, 1456, 1609
BspLI	GGNNCC	7 cut(s)	237, 321, 378, 603, 1083, 1671, 1859
BspMAI	CTGCAG	4 cut(s)	475, 505, 679, 1538
BspMI	ACCTGC	2 cut(s)	464, 1105
BspPI	GGATC	4 cut(s)	314, 327, 1664, 1677
BspQI	GCTCTTC	1 cut(s)	745
BspT107I	GGYRCC	1 cut(s)	235
BsrDI	GCAATG	2 cut(s)	643, 1779
BsrFI	RCCGGY	1 cut(s)	598
BsrGI	TGTACA	1 cut(s)	349
BsrI	ACTGG	7 cut(s)	190, 847, 892, 939, 1569, 1621, 1822
BssAI	RCCGGY	1 cut(s)	598
BssECI	CCNNGG	3 cut(s)	18, 19, 151
BssMI	GATC	6 cut(s)	55, 319, 910, 1247, 1403, 1669
BssNI	GRCGYC	1 cut(s)	236
BssT1I	CCWWGG	1 cut(s)	151
Bst2UI	CCWGG	3 cut(s)	20, 32, 134
Bst4CI	ACNGT	6 cut(s)	161, 296, 385, 1195, 1394, 1564
Bst6I	CTCTTC	4 cut(s)	705, 745, 1137, 1447
BstACI	GRCGYC	1 cut(s)	236
BstAUI	TGTACA	1 cut(s)	349
BstC8I	GCNNGC	4 cut(s)	375, 600, 1287, 1587
BstDEI	CTNAG	5 cut(s)	86, 1332, 1464, 1596, 1674
BstDSI	CCRYGG	1 cut(s)	151
BstENI	CCTNNNNNAGG	1 cut(s)	1677
BstF5I	GGATG	1 cut(s)	670
BstH2I	RGCGCY	1 cut(s)	239
BstHHI	GCGC	1 cut(s)	238
BstKTI	GATC	6 cut(s)	58, 322, 913, 1250, 1406, 1672
BstMAI	GTCTC	3 cut(s)	55, 1481, 1808
BstMBI	GATC	6 cut(s)	55, 319, 910, 1247, 1403, 1669
BstMWI	GCNNNNNNNGC	4 cut(s)	370, 878, 1295, 1502
BstNI	CCWGG	3 cut(s)	20, 32, 134
BstSCI	CCNGG	3 cut(s)	18, 30, 132
BstSFI	CTRYAG	5 cut(s)	471, 501, 675, 807, 1534
BstV1I	GCAGC	3 cut(s)	487, 1282, 1604
BstV2I	GAAGAC	4 cut(s)	153, 494, 996, 1436
BstX2I	RGATCY	4 cut(s)	319, 1247, 1403, 1669
BstYI	RGATCY	4 cut(s)	319, 1247, 1403, 1669
BsuI	GTATCC	1 cut(s)	1041
BsuRI	GGCC	4 cut(s)	5, 189, 1289, 1585
BtgI	CCRYGG	1 cut(s)	151
BtsCI	GGATG	1 cut(s)	670
BtsI	GCAGTG	3 cut(s)	468, 1290, 1519
BtsIMutI	CAGTG	7 cut(s)	301, 468, 1290, 1519, 1576, 1611, 1614
BveI	ACCTGC	2 cut(s)	464, 1105
Cac8I	GCNNGC	4 cut(s)	375, 600, 1287, 1587
CaiI	CAGNNNCTG	2 cut(s)	414, 887
CfoI	GCGC	1 cut(s)	238
Cfr10I	RCCGGY	1 cut(s)	598
Cfr13I	GGNCC	4 cut(s)	4, 476, 721, 1619
CseI	GACGC	1 cut(s)	1441
Csp6I	GTAC	4 cut(s)	76, 350, 1539, 1777
CviAII	CATG	3 cut(s)	152, 218, 1047
CviQI	GTAC	4 cut(s)	76, 350, 1539, 1777
DdeI	CTNAG	5 cut(s)	86, 1332, 1464, 1596, 1674
DinI	GGCGCC	1 cut(s)	237
DpnI	GATC	6 cut(s)	57, 321, 912, 1249, 1405, 1671
DpnII	GATC	6 cut(s)	55, 319, 910, 1247, 1403, 1669
DraI	TTTAAA	1 cut(s)	549
EaeI	YGGCCR	2 cut(s)	187, 1287
Eam1104I	CTCTTC	4 cut(s)	705, 745, 1137, 1447
EarI	CTCTTC	4 cut(s)	705, 745, 1137, 1447
Ecl136II	GAGCTC	2 cut(s)	364, 1057
Eco130I	CCWWGG	1 cut(s)	151
Eco147I	AGGCCT	1 cut(s)	1585
Eco24I	GRGCYC	2 cut(s)	366, 1059
Eco32I	GATATC	1 cut(s)	1149
Eco47I	GGWCC	3 cut(s)	476, 721, 1619
Eco53kI	GAGCTC	2 cut(s)	364, 1057
Eco57I	CTGAAG	2 cut(s)	506, 966
EcoICRI	GAGCTC	2 cut(s)	364, 1057
EcoNI	CCTNNNNNAGG	1 cut(s)	1677
EcoRI	GAATTC	2 cut(s)	1213, 1762
EcoRII	CCWGG	3 cut(s)	18, 30, 132
EcoRV	GATATC	1 cut(s)	1149
EcoT14I	CCWWGG	1 cut(s)	151
EcoT38I	GRGCYC	2 cut(s)	366, 1059
EgeI	GGCGCC	1 cut(s)	237
EheI	GGCGCC	1 cut(s)	237
ErhI	CCWWGG	1 cut(s)	151
Esp3I	CGTCTC	1 cut(s)	55
FaeI	CATG	3 cut(s)	155, 221, 1050
FatI	CATG	3 cut(s)	151, 217, 1046
FbaI	TGATCA	1 cut(s)	910
Fnu4HI	GCNGC	5 cut(s)	418, 501, 1296, 1590, 1593
FokI	GGATG	1 cut(s)	657
FriOI	GRGCYC	2 cut(s)	366, 1059
Fsp4HI	GCNGC	5 cut(s)	418, 501, 1296, 1590, 1593
FspBI	CTAG	3 cut(s)	579, 873, 954
GlaI	GCGC	1 cut(s)	237
GluI	GCNGC	5 cut(s)	418, 501, 1296, 1590, 1593
GsaI	CCCAGC	1 cut(s)	1320
GsuI	CTGGAG	6 cut(s)	14, 116, 771, 864, 1767, 1839
HaeII	RGCGCY	1 cut(s)	239
HaeIII	GGCC	4 cut(s)	5, 189, 1289, 1585
HapII	CCGG	1 cut(s)	599
HgaI	GACGC	1 cut(s)	1441
HhaI	GCGC	1 cut(s)	238
Hin1I	GRCGYC	1 cut(s)	236
Hin1II	CATG	3 cut(s)	155, 221, 1050
Hin6I	GCGC	1 cut(s)	236
HinP1I	GCGC	1 cut(s)	236
HincII	GTYRAC	1 cut(s)	1156
HindII	GTYRAC	1 cut(s)	1156
HindIII	AAGCTT	1 cut(s)	224
HinfI	GANTC	4 cut(s)	88, 829, 1187, 1754
HpaII	CCGG	1 cut(s)	599
HphI	GGTGA	1 cut(s)	1014
Hpy166II	GTNNAC	6 cut(s)	292, 479, 1156, 1270, 1369, 1663
Hpy8I	GTNNAC	6 cut(s)	292, 479, 1156, 1270, 1369, 1663
Hpy99I	CGWCG	1 cut(s)	905
HpyAV	CCTTC	2 cut(s)	712, 1699
HpyCH4III	ACNGT	6 cut(s)	161, 296, 385, 1195, 1394, 1564
HpyCH4IV	ACGT	2 cut(s)	1342, 1447
HpyF10VI	GCNNNNNNNGC	4 cut(s)	370, 878, 1295, 1502
HpyF3I	CTNAG	5 cut(s)	86, 1332, 1464, 1596, 1674
HpySE526I	ACGT	2 cut(s)	1342, 1447
Hsp92I	GRCGYC	1 cut(s)	236
Hsp92II	CATG	3 cut(s)	155, 221, 1050
HspAI	GCGC	1 cut(s)	236
KasI	GGCGCC	1 cut(s)	235
KroI	GCCGGC	1 cut(s)	598
KroNI	GCCGGC	1 cut(s)	600
Ksp22I	TGATCA	1 cut(s)	910
Kzo9I	GATC	6 cut(s)	55, 319, 910, 1247, 1403, 1669
LguI	GCTCTTC	1 cut(s)	745
LmnI	GCTCC	9 cut(s)	135, 284, 361, 369, 382, 607, 700, 845, 1863
Lsp1109I	GCAGC	3 cut(s)	487, 1282, 1604
LweI	GCATC	6 cut(s)	106, 791, 994, 1028, 1303, 1406
MaeI	CTAG	3 cut(s)	579, 873, 954
MaeII	ACGT	2 cut(s)	1342, 1447
MaeIII	GTNAC	6 cut(s)	649, 949, 1343, 1459, 1564, 1573
MalI	GATC	6 cut(s)	57, 321, 912, 1249, 1405, 1671
MboI	GATC	6 cut(s)	55, 319, 910, 1247, 1403, 1669
MflI	RGATCY	4 cut(s)	319, 1247, 1403, 1669
MhlI	GDGCHC	3 cut(s)	366, 470, 1059
MlsI	TGGCCA	2 cut(s)	189, 1289
MluNI	TGGCCA	2 cut(s)	189, 1289
Mly113I	GGCGCC	1 cut(s)	236
MlyI	GAGTC	2 cut(s)	97, 1763
MmeI	TCCRAC	2 cut(s)	71, 404
Mox20I	TGGCCA	2 cut(s)	189, 1289
MroNI	GCCGGC	1 cut(s)	598
MscI	TGGCCA	2 cut(s)	189, 1289
MseI	TTAA	7 cut(s)	519, 548, 624, 921, 927, 1722, 1853
Msp20I	TGGCCA	2 cut(s)	189, 1289
MspI	CCGG	1 cut(s)	599
MspR9I	CCNGG	3 cut(s)	20, 32, 134
Mva1269I	GAATGC	3 cut(s)	309, 343, 420
MvaI	CCWGG	3 cut(s)	20, 32, 134
MwoI	GCNNNNNNNGC	4 cut(s)	370, 878, 1295, 1502
NaeI	GCCGGC	1 cut(s)	600
NarI	GGCGCC	1 cut(s)	236
NcoI	CCATGG	1 cut(s)	151
NdeII	GATC	6 cut(s)	55, 319, 910, 1247, 1403, 1669
NgoMIV	GCCGGC	1 cut(s)	598
NlaIII	CATG	3 cut(s)	155, 221, 1050
NlaIV	GGNNCC	7 cut(s)	237, 321, 378, 603, 1083, 1671, 1859
NmuCI	GTSAC	1 cut(s)	949
PasI	CCCWGGG	1 cut(s)	19
PceI	AGGCCT	1 cut(s)	1585
PciSI	GCTCTTC	1 cut(s)	745
PcsI	WCGNNNNNNNCGW	1 cut(s)	45
PctI	GAATGC	3 cut(s)	309, 343, 420
PdiI	GCCGGC	1 cut(s)	600
PfeI	GAWTC	2 cut(s)	829, 1187
PfoI	TCCNGGA	2 cut(s)	30, 132
PkrI	GCNGC	5 cut(s)	419, 502, 1297, 1591, 1594
PleI	GAGTC	2 cut(s)	96, 1762
PluTI	GGCGCC	1 cut(s)	239
PpsI	GAGTC	2 cut(s)	96, 1762
PshBI	ATTAAT	1 cut(s)	519
Psp124BI	GAGCTC	2 cut(s)	366, 1059
Psp6I	CCWGG	3 cut(s)	18, 30, 132
PspFI	CCCAGC	1 cut(s)	1316
PspGI	CCWGG	3 cut(s)	18, 30, 132
PspN4I	GGNNCC	7 cut(s)	237, 321, 378, 603, 1083, 1671, 1859
PspPI	GGNCC	4 cut(s)	4, 476, 721, 1619
PstI	CTGCAG	4 cut(s)	475, 505, 679, 1538
PstNI	CAGNNNCTG	2 cut(s)	414, 887
PsuI	RGATCY	4 cut(s)	319, 1247, 1403, 1669
RsaI	GTAC	4 cut(s)	77, 351, 1540, 1778
RsaNI	GTAC	4 cut(s)	76, 350, 1539, 1777
SacI	GAGCTC	2 cut(s)	366, 1059
SapI	GCTCTTC	1 cut(s)	745
SaqAI	TTAA	7 cut(s)	519, 548, 624, 921, 927, 1722, 1853
SatI	GCNGC	5 cut(s)	418, 501, 1296, 1590, 1593
Sau3AI	GATC	6 cut(s)	55, 319, 910, 1247, 1403, 1669
Sau96I	GGNCC	4 cut(s)	4, 476, 721, 1619
SchI	GAGTC	2 cut(s)	97, 1763
ScrFI	CCNGG	3 cut(s)	20, 32, 134
SduI	GDGCHC	3 cut(s)	366, 470, 1059
SfaNI	GCATC	6 cut(s)	106, 791, 994, 1028, 1303, 1406
SfcI	CTRYAG	5 cut(s)	471, 501, 675, 807, 1534
SfoI	GGCGCC	1 cut(s)	237
SinI	GGWCC	3 cut(s)	476, 721, 1619
SmlI	CTYRAG	1 cut(s)	397
SmoI	CTYRAG	1 cut(s)	397
SseBI	AGGCCT	1 cut(s)	1585
SsiI	CCGC	2 cut(s)	417, 1590
SspDI	GGCGCC	1 cut(s)	235
SspI	AATATT	1 cut(s)	1687
SspMI	CTAG	3 cut(s)	579, 873, 954
SstI	GAGCTC	2 cut(s)	366, 1059
StuI	AGGCCT	1 cut(s)	1585
StyD4I	CCNGG	3 cut(s)	18, 30, 132
StyI	CCWWGG	1 cut(s)	151
TaaI	ACNGT	6 cut(s)	161, 296, 385, 1195, 1394, 1564
TaiI	ACGT	2 cut(s)	1345, 1450
TaqI	TCGA	2 cut(s)	12, 39
TatI	WGTACW	2 cut(s)	349, 1538
TauI	GCSGC	2 cut(s)	420, 1592
TfiI	GAWTC	2 cut(s)	829, 1187
Tru1I	TTAA	7 cut(s)	519, 548, 624, 921, 927, 1722, 1853
Tru9I	TTAA	7 cut(s)	519, 548, 624, 921, 927, 1722, 1853
TscAI	CASTG	7 cut(s)	301, 475, 1297, 1519, 1576, 1611, 1621
TseFI	GTSAC	1 cut(s)	949
TseI	GCWGC	3 cut(s)	500, 1295, 1592
Tsp45I	GTSAC	1 cut(s)	949
TspDTI	ATGAA	4 cut(s)	1002, 1458, 1538, 1683
TspGWI	ACGGA	3 cut(s)	271, 976, 1173
TspRI	CASTG	7 cut(s)	301, 475, 1297, 1519, 1576, 1611, 1621
VpaK11BI	GGWCC	3 cut(s)	476, 721, 1619
VspI	ATTAAT	1 cut(s)	519
XagI	CCTNNNNNAGG	1 cut(s)	1677
XapI	RAATTY	8 cut(s)	263, 344, 766, 802, 864, 1213, 1422, 1762
XcmI	CCANNNNNNNNNTGG	1 cut(s)	330
XspI	CTAG	3 cut(s)	579, 873, 954

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.