Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0008964

Physical Location & Seq

Genomic Coordinates Reverse (-)

84762610 .. 84766977

Gene Structure 4368 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00062720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGCTATTAATACCCCTTCTTAGTACACTAAACCAACCAAGAAAAAATCTTACATCCCTTTACTGTAGTTCTTCTGAAGATCAATTCAGAAACACAAAGATGTCAGTTTCCGGCACAAAGAATTTCTTCAGGAGGTTTTGTATTGATGAATACCAAATAGATAGTGTTGCTCAGAGCAGCTTCTTCTCTAGTGATCTATTGCCATCTCTTGGAGCCAGAATCAACCAATCAACCAAGCTCCGAAAATACATTATATCGCCTTACAATCCTCGTTATAGGGCTTGGGAGATGTTACTCATTGTTCTCGTCATTTACTCCGCCTGGATTTGCCCATTCGAGTTTGCATTCTTGACTTACAAGCAAGATGCTCTTTTTGTCATCGACAACATTGTCAACGGTTTCTTTGCCATTGACATCTTCCTCACTTTCTTTGTTGCATATCTCGACAGCCAGTCTTATCTTCTTGTTGACAATCCCAAGCAAATTGCAACGAGGTACATATCAACCTGGTTTATTTTCGATGTGTGTTCCACTGCCCCATTCCAGCCTATTATTAGCCTCTTGTTTACAAATCATGGCAGCGAACTTGGCTTTAAAGTACTGAACATGCTCCGGCTCTGGCGCCTCAGACGAGTGAGCTCCCTGTTTGCAAGACTTGAGAAGGACATTCGATTCAATTACTTCTGGACTCGGTGCACAAAGCTCATTTCTGTGACCCTTTTCGCAGTACATTGTGCTGGTTGCTTTTACTATCTGATAGCAGACAGATACCCCGATTCAAAACAAACATGGATCGGTGCAGTGTACCCAAATTTCAAAGAGGATAGTCTTTGGAATAGATATGTCACTGCAATGTACTGGTCTATCACAACACTCACGACCACTGGCTATGGAGACTTGCATGCTGAGAACCCAAGGGAGATGCTGTTCGATATTTTCTACATGCTGTTCAACTTGGGATTGACAGCTTACCTCATCGGAAACATGACAAACCTTGTGGTTCATTCGACCAGCAGAACCAGAAACTTTAGGGACACGGTGCGAGCTGCTTCAGAATTTGCAGCAAGAAATGACTTGCCGCCAAGAATACAGGACCAAATGTTGTCACACATATGCCTCAAGTTCAGGACAGAAGGGTTGAAGCAGCAAGAGACCTTGAATGATCTCCCCAAAGCGCTTCGTTCAAGCATTGCTCAGCATCTCTTCTTCCCCATTATTCAAAAAGTCGATATCTTCCAAGGAGTTTCATATGACTTCCTTTTCCAATTGGTATCAGAAATAGATGCGGAGTACTTTCCACCCAAAGAAGAAGTCATTCTGCAAAATGAGGCCCCAACGGATCTTTACATACTGGTCTCAGGTGCAGTAGTTTTAATATCCAATATTGATGGGCAAGAGCAAGTTGTAGGAAAGGCAAATTCTGGGGATACTTTGGGCGAAATTGGAGTATTATGTCAGAAGCCACAGCCTTACACAGTTCGGACAACTGAACTTTCCCAAATATTACGACTCCGCAGAAATTCACTGATGACCACTATACAGACAAATAAGGAAGACGAGCAGATTATCATGAACAACATTTTTATGAAACTGAAAGGGGAAGATGGCTCAGGCTTTGAATATCCACATACAAATCCAGGCTTAATGCTTGACAATTGTCCTGGAGGAGGACAGAGAGGAGGATGCAACGATAGCTCACATGAAGATGCAGCAATGCAGGAAGGAAGGAACAATTGCTTTACAGCTTCGCAGGCTAGGAAGAAGAGTGAAATAGGCAAAGCTCAAATGACAGGTGAGAATGGCCAAACTGAAATTCAAGCTGCTGTTTGCCAGGGCCATCTGGAAAAGGTAAAAATTGTGATTGAAGGAGGAGCAGATGTCAACAAACCGGAAGCTAGAGGATGGATGCCAAAAGGTCTAGCACAACAGCAAGGAGACAAGGACATACATGACCTCTTATTAAGTTATGAAAATAGAAGAGAAATGGATGAACATAGAATAGAGTTCATTGAGCCAGAAACATCTGGAAGCACCAGCAATTGTGAAGGAAATTGTAAAACACGGGAAGACCACCAACATATTCATTCTCACTTGAGAAAGGTAGCCATGAAGTCATATCAGTGCCCGTCTAGCCCTGCAAGTGACAGAGAACAAAGGATCAGATCATACAGCAAGAGAGTAACTATCCACATGCATTCTAAAAGTGAAAGTGTGTCGGAAAGGCAGCTTGCAAAATTAATAATTCTACCTGATTCCATAGACGAGCTGCTCAGAGTTGCTAGTGAGAAGTTAGGAGGCTACAGACCTACAAAAGTCGTGAATGCAGAGAATGCAGAAATAGAAGATATGAGTGTCGTTAGAGATGGTGATCATCTGTTTCTTCTTCATAATGATTGTCAAAATTTGTACTCTGATGTGACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005242 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0007623 GO:0008150 GO:0008324 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009987 GO:0010118 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015276 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0042802 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0048511 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662 GO:0099094

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ion_trans KHA cNMP_binding

Protein Analysis

807

Amino Acids

92.14

Weight (kDa)

6.29

Isoelectric Point (pI)

44.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	92 - 340	4.1e-44	Ion transport protein
Ion_trans_2	PF07885	253 - 333	1.2e-12	Ion channel
cNMP_binding	PF00027	431 - 516	2.1e-16	Cyclic nucleotide-binding domain
KHA	PF11834	725 - 794	7.7e-24	KHA, dimerisation domain of potassium ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008964)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18290 AT4G18290 AT5G46240
fragaria_vesca	FvH4_3g05650 FvH4_3g05650
malus_domestica	MD05G1284400.v1.1 MD10G1262800.v1.1
prunus_persica	Prupe.4G080000_v2.0.a1 Prupe.4G080000_v2.0.a1
pyrus_communis	pycom05g26360
rosa_chinensis	RchiOBHm_Chr5g0013991
rosa_laevigata	RLG00000032060
rosa_multiflora	Rmu_co8232297.1_g000001 Rmu_co8474133.1_g000001 Rmu_sc0005803.1_g000012
rosa_roxburghii	Rroxscaffold_1G00062720
rosa_rugosa	Rorug05G0013900
rosa_samantha	Rh5AG108400 Rh5BG105200 Rh5CG117000 Rh5DG103900
rosa_wichuraiana	Rw5G009460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	389
AccB1I	GGYRCC	1 cut(s)	621
AccB7I	CCANNNNNTGG	1 cut(s)	209
AciI	CCGC	4 cut(s)	318, 1079, 1286, 1513
AclWI	GGATC	3 cut(s)	800, 1347, 2165
AcoI	YGGCCR	1 cut(s)	1801
AcsI	RAATTY	7 cut(s)	121, 811, 1055, 1417, 1519, 1812, 2401
AcuI	CTGAAG	3 cut(s)	96, 112, 1035
AcyI	GRCGYC	1 cut(s)	622
AfaI	GTAC	8 cut(s)	25, 497, 600, 729, 806, 857, 1292, 2408
AfeI	AGCGCT	1 cut(s)	1176
AfiI	CCNNNNNNNGG	2 cut(s)	209, 1667
AhdI	GACNNNNNGTC	1 cut(s)	451
AjnI	CCWGG	5 cut(s)	320, 506, 1636, 1660, 1830
AjuI	GAANNNNNNNTTGG	2 cut(s)	1797, 1829
AloI	GAACNNNNNNTCC	2 cut(s)	911, 943
Alw21I	GWGCWC	2 cut(s)	641, 698
Alw26I	GTCTC	4 cut(s)	888, 1145, 1360, 1929
Alw44I	GTGCAC	1 cut(s)	694
AlwI	GGATC	3 cut(s)	800, 1347, 2165
Aor51HI	AGCGCT	1 cut(s)	1176
AoxI	GGCC	3 cut(s)	1329, 1801, 1834
ApaLI	GTGCAC	1 cut(s)	694
ApeKI	GCWGC	9 cut(s)	177, 579, 1046, 1061, 1144, 1709, 1820, 2224, 2266
ApoI	RAATTY	7 cut(s)	121, 811, 1055, 1417, 1519, 1812, 2401
ArsI	GACNNNNNNTTYG	2 cut(s)	1296, 1328
AseI	ATTAAT	2 cut(s)	8, 2237
Asp700I	GAANNNNTTC	2 cut(s)	125, 1314
AspLEI	GCGC	2 cut(s)	624, 1177
AspS9I	GGNCC	3 cut(s)	1093, 1330, 1834
AsuHPI	GGTGA	2 cut(s)	1805, 2378
AvaII	GGWCC	1 cut(s)	1093
BaeGI	GKGCMC	2 cut(s)	698, 2126
BalI	TGGCCA	1 cut(s)	1803
BanI	GGYRCC	1 cut(s)	621
BanII	GRGCYC	1 cut(s)	641
BbsI	GAAGAC	2 cut(s)	1560, 2073
Bbv12I	GWGCWC	2 cut(s)	641, 698
BbvI	GCAGC	9 cut(s)	189, 591, 1033, 1073, 1156, 1721, 1807, 2236, 2253
BccI	CCATC	6 cut(s)	211, 1382, 1598, 1845, 1896, 2357
BciT130I	CCWGG	5 cut(s)	322, 508, 1638, 1662, 1832
BciVI	GTATCC	1 cut(s)	1420
BclI	TGATCA	1 cut(s)	2368
BcoDI	GTCTC	4 cut(s)	888, 1145, 1360, 1929
BfaI	CTAG	6 cut(s)	189, 1755, 1896, 1919, 2130, 2280
BfmI	CTRYAG	2 cut(s)	64, 2299
BfoI	RGCGCY	2 cut(s)	625, 1178
BfuI	GTATCC	1 cut(s)	1420
BlpI	GCTNAGC	1 cut(s)	1194
BmcAI	AGTACT	2 cut(s)	600, 1292
Bme1390I	CCNGG	5 cut(s)	322, 508, 1638, 1662, 1832
Bme18I	GGWCC	1 cut(s)	1093
BmeRI	GACNNNNNGTC	1 cut(s)	451
BmgT120I	GGNCC	3 cut(s)	1093, 1330, 1834
BmiI	GGNNCC	3 cut(s)	214, 623, 1332
BmrFI	CCNGG	5 cut(s)	322, 508, 1638, 1662, 1832
BmsI	GCATC	7 cut(s)	355, 912, 1207, 1273, 1673, 1696, 1896
BoxI	GACNNNNGTC	1 cut(s)	1656
BpiI	GAAGAC	2 cut(s)	1560, 2073
BpmI	CTGGAG	1 cut(s)	1683
Bpu10I	CCTNAGC	1 cut(s)	1609
Bpu1102I	GCTNAGC	1 cut(s)	1194
BpuEI	CTTGAG	3 cut(s)	677, 1103, 2113
BsaBI	GATNNNNATC	1 cut(s)	2367
BsaHI	GRCGYC	1 cut(s)	622
BsaI	GGTCTC	2 cut(s)	1145, 1360
BsaJI	CCNNGG	3 cut(s)	914, 1237, 1831
BsaWI	WCCGGW	1 cut(s)	1888
BsaXI	ACNNNNNCTCC	6 cut(s)	124, 154, 911, 941, 1863, 1893
Bsc4I	CCNNNNNNNGG	2 cut(s)	209, 1667
Bse1I	ACTGG	4 cut(s)	451, 863, 889, 1356
Bse3DI	GCAATG	3 cut(s)	858, 1188, 1719
Bse8I	GATNNNNATC	1 cut(s)	2367
BseBI	CCWGG	5 cut(s)	322, 508, 1638, 1662, 1832
BseDI	CCNNGG	3 cut(s)	914, 1237, 1831
BseGI	GGATG	5 cut(s)	53, 1688, 1907, 1911, 1993
BseJI	GATNNNNATC	1 cut(s)	2367
BseLI	CCNNNNNNNGG	2 cut(s)	209, 1667
BseMI	GCAATG	3 cut(s)	858, 1188, 1719
BseMII	CTCAG	7 cut(s)	185, 640, 897, 1208, 1371, 1623, 2284
BseNI	ACTGG	4 cut(s)	451, 863, 889, 1356
BseRI	GAGGAG	3 cut(s)	1680, 1692, 1884
BseSI	GKGCMC	2 cut(s)	698, 2126
BseXI	GCAGC	9 cut(s)	189, 591, 1033, 1073, 1156, 1721, 1807, 2236, 2253
BsgI	GTGCAG	2 cut(s)	819, 1383
BshFI	GGCC	3 cut(s)	1331, 1803, 1836
BshNI	GGYRCC	1 cut(s)	621
BsiHKAI	GWGCWC	2 cut(s)	641, 698
BsiSI	CCGG	3 cut(s)	111, 613, 1889
BslFI	GGGAC	1 cut(s)	1046
BslI	CCNNNNNNNGG	2 cut(s)	209, 1667
BsmAI	GTCTC	4 cut(s)	888, 1145, 1360, 1929
BsmFI	GGGAC	1 cut(s)	1046
BsmI	GAATGC	4 cut(s)	344, 2194, 2326, 2335
BsnI	GGCC	3 cut(s)	1331, 1803, 1836
Bso31I	GGTCTC	2 cut(s)	1145, 1360
Bsp1286I	GDGCHC	3 cut(s)	641, 698, 2126
Bsp143I	GATC	8 cut(s)	79, 193, 792, 1162, 1339, 2157, 2162, 2368
Bsp1720I	GCTNAGC	1 cut(s)	1194
BspACI	CCGC	4 cut(s)	318, 1079, 1286, 1513
BspANI	GGCC	3 cut(s)	1331, 1803, 1836
BspCNI	CTCAG	7 cut(s)	184, 639, 898, 1207, 1370, 1622, 2283
BspHI	TCATGA	1 cut(s)	1569
BspLI	GGNNCC	3 cut(s)	214, 623, 1332
BspPI	GGATC	3 cut(s)	800, 1347, 2165
BspT107I	GGYRCC	1 cut(s)	621
BspTNI	GGTCTC	2 cut(s)	1145, 1360
BsrDI	GCAATG	3 cut(s)	858, 1188, 1719
BsrI	ACTGG	4 cut(s)	451, 863, 889, 1356
BssECI	CCNNGG	3 cut(s)	914, 1237, 1831
BssMI	GATC	8 cut(s)	79, 193, 792, 1162, 1339, 2157, 2162, 2368
BssNI	GRCGYC	1 cut(s)	622
BssT1I	CCWWGG	2 cut(s)	914, 1237
Bst2UI	CCWGG	5 cut(s)	322, 508, 1638, 1662, 1832
Bst4CI	ACNGT	4 cut(s)	65, 398, 1039, 1477
Bst6I	CTCTTC	3 cut(s)	1208, 1757, 1972
BstACI	GRCGYC	1 cut(s)	622
BstAPI	GCANNNNNTGC	1 cut(s)	2330
BstC8I	GCNNGC	4 cut(s)	903, 1044, 1752, 2229
BstDEI	CTNAG	8 cut(s)	20, 171, 626, 906, 1194, 1357, 1609, 2270
BstENI	CCTNNNNNAGG	1 cut(s)	1665
BstF5I	GGATG	5 cut(s)	53, 1688, 1907, 1911, 1993
BstH2I	RGCGCY	2 cut(s)	625, 1178
BstHHI	GCGC	2 cut(s)	624, 1177
BstKTI	GATC	8 cut(s)	82, 196, 795, 1165, 1342, 2160, 2165, 2371
BstMAI	GTCTC	4 cut(s)	888, 1145, 1360, 1929
BstMBI	GATC	8 cut(s)	79, 193, 792, 1162, 1339, 2157, 2162, 2368
BstMWI	GCNNNNNNNGC	5 cut(s)	588, 1692, 1751, 2130, 2330
BstNI	CCWGG	5 cut(s)	322, 508, 1638, 1662, 1832
BstNSI	RCATGY	4 cut(s)	610, 905, 946, 2194
BstPAI	GACNNNNGTC	1 cut(s)	1656
BstSCI	CCNGG	5 cut(s)	320, 506, 1636, 1660, 1830
BstSFI	CTRYAG	2 cut(s)	64, 2299
BstSLI	GKGCMC	2 cut(s)	698, 2126
BstV1I	GCAGC	9 cut(s)	189, 591, 1033, 1073, 1156, 1721, 1807, 2236, 2253
BstV2I	GAAGAC	2 cut(s)	1560, 2073
BstX2I	RGATCY	1 cut(s)	1339
BstYI	RGATCY	1 cut(s)	1339
BsuI	GTATCC	1 cut(s)	1420
BsuRI	GGCC	3 cut(s)	1331, 1803, 1836
BtsCI	GGATG	5 cut(s)	53, 1688, 1907, 1911, 1993
BtsI	GCAGTG	3 cut(s)	531, 807, 846
BtsIMutI	CAGTG	6 cut(s)	531, 807, 846, 882, 1523, 2126
Cac8I	GCNNGC	4 cut(s)	903, 1044, 1752, 2229
CciI	TCATGA	1 cut(s)	1569
CfoI	GCGC	2 cut(s)	624, 1177
Cfr13I	GGNCC	3 cut(s)	1093, 1330, 1834
CsiI	ACCWGGT	1 cut(s)	506
Csp6I	GTAC	8 cut(s)	24, 496, 599, 728, 805, 856, 1291, 2407
CspCI	CAANNNNNGTGG	2 cut(s)	978, 1013
CviQI	GTAC	8 cut(s)	24, 496, 599, 728, 805, 856, 1291, 2407
DdeI	CTNAG	8 cut(s)	20, 171, 626, 906, 1194, 1357, 1609, 2270
DinI	GGCGCC	1 cut(s)	623
DpnI	GATC	8 cut(s)	81, 195, 794, 1164, 1341, 2159, 2164, 2370
DpnII	GATC	8 cut(s)	79, 193, 792, 1162, 1339, 2157, 2162, 2368
DraI	TTTAAA	1 cut(s)	595
DrdI	GACNNNNNNGTC	1 cut(s)	389
DriI	GACNNNNNGTC	1 cut(s)	451
DseDI	GACNNNNNNGTC	1 cut(s)	389
EaeI	YGGCCR	1 cut(s)	1801
Eam1104I	CTCTTC	3 cut(s)	1208, 1757, 1972
Eam1105I	GACNNNNNGTC	1 cut(s)	451
EarI	CTCTTC	3 cut(s)	1208, 1757, 1972
EciI	GGCGGA	1 cut(s)	307
Ecl136II	GAGCTC	1 cut(s)	639
Eco130I	CCWWGG	2 cut(s)	914, 1237
Eco24I	GRGCYC	1 cut(s)	641
Eco31I	GGTCTC	2 cut(s)	1145, 1360
Eco32I	GATATC	1 cut(s)	1231
Eco47I	GGWCC	1 cut(s)	1093
Eco47III	AGCGCT	1 cut(s)	1176
Eco53kI	GAGCTC	1 cut(s)	639
Eco57I	CTGAAG	3 cut(s)	96, 112, 1035
EcoICRI	GAGCTC	1 cut(s)	639
EcoNI	CCTNNNNNAGG	1 cut(s)	1665
EcoO109I	RGGNCCY	1 cut(s)	1330
EcoRII	CCWGG	5 cut(s)	320, 506, 1636, 1660, 1830
EcoRV	GATATC	1 cut(s)	1231
EcoT14I	CCWWGG	2 cut(s)	914, 1237
EcoT22I	ATGCAT	1 cut(s)	2196
EcoT38I	GRGCYC	1 cut(s)	641
EgeI	GGCGCC	1 cut(s)	623
EheI	GGCGCC	1 cut(s)	623
ErhI	CCWWGG	2 cut(s)	914, 1237
FalI	AAGNNNNNCTT	4 cut(s)	110, 142, 354, 386
FaqI	GGGAC	1 cut(s)	1046
FauNDI	CATATG	2 cut(s)	1112, 1249
FbaI	TGATCA	1 cut(s)	2368
FokI	GGATG	5 cut(s)	40, 1695, 1914, 1918, 2000
FriOI	GRGCYC	1 cut(s)	641
FspBI	CTAG	6 cut(s)	189, 1755, 1896, 1919, 2130, 2280
GlaI	GCGC	2 cut(s)	623, 1176
GsuI	CTGGAG	1 cut(s)	1683
HaeII	RGCGCY	2 cut(s)	625, 1178
HaeIII	GGCC	3 cut(s)	1331, 1803, 1836
HapII	CCGG	3 cut(s)	111, 613, 1889
HhaI	GCGC	2 cut(s)	624, 1177
Hin1I	GRCGYC	1 cut(s)	622
Hin6I	GCGC	2 cut(s)	622, 1175
HinP1I	GCGC	2 cut(s)	622, 1175
HincII	GTYRAC	3 cut(s)	394, 469, 1882
HindII	GTYRAC	3 cut(s)	394, 469, 1882
HinfI	GANTC	6 cut(s)	219, 672, 688, 776, 1509, 2252
HpaII	CCGG	3 cut(s)	111, 613, 1889
HphI	GGTGA	2 cut(s)	1805, 2378
Hpy166II	GTNNAC	7 cut(s)	26, 394, 469, 567, 696, 805, 1882
Hpy8I	GTNNAC	7 cut(s)	26, 394, 469, 567, 696, 805, 1882
HpyAV	CCTTC	7 cut(s)	26, 655, 1127, 1715, 1719, 1859, 2039
HpyCH4III	ACNGT	4 cut(s)	65, 398, 1039, 1477
HpyF10VI	GCNNNNNNNGC	5 cut(s)	588, 1692, 1751, 2130, 2330
HpyF3I	CTNAG	8 cut(s)	20, 171, 626, 906, 1194, 1357, 1609, 2270
Hsp92I	GRCGYC	1 cut(s)	622
HspAI	GCGC	2 cut(s)	622, 1175
KasI	GGCGCC	1 cut(s)	621
Ksp22I	TGATCA	1 cut(s)	2368
Kzo9I	GATC	8 cut(s)	79, 193, 792, 1162, 1339, 2157, 2162, 2368
LmnI	GCTCC	5 cut(s)	212, 243, 615, 644, 1871
Lsp1109I	GCAGC	9 cut(s)	189, 591, 1033, 1073, 1156, 1721, 1807, 2236, 2253
LweI	GCATC	7 cut(s)	355, 912, 1207, 1273, 1673, 1696, 1896
MabI	ACCWGGT	1 cut(s)	506
MaeI	CTAG	6 cut(s)	189, 1755, 1896, 1919, 2130, 2280
MaeIII	GTNAC	7 cut(s)	291, 712, 844, 1104, 2141, 2179, 2416
MalI	GATC	8 cut(s)	81, 195, 794, 1164, 1341, 2159, 2164, 2370
MboI	GATC	8 cut(s)	79, 193, 792, 1162, 1339, 2157, 2162, 2368
MfeI	CAATTG	4 cut(s)	1265, 1654, 1732, 2038
MflI	RGATCY	1 cut(s)	1339
MhlI	GDGCHC	3 cut(s)	641, 698, 2126
MlsI	TGGCCA	1 cut(s)	1803
MluNI	TGGCCA	1 cut(s)	1803
Mly113I	GGCGCC	1 cut(s)	622
MlyI	GAGTC	2 cut(s)	682, 1503
MmeI	TCCRAC	1 cut(s)	2196
Mox20I	TGGCCA	1 cut(s)	1803
Mph1103I	ATGCAT	1 cut(s)	2196
MroXI	GAANNNNTTC	2 cut(s)	125, 1314
MscI	TGGCCA	1 cut(s)	1803
MseI	TTAA	6 cut(s)	8, 594, 1373, 1643, 1961, 2237
MslI	CAYNNNNRTG	7 cut(s)	98, 710, 851, 1111, 1583, 1704, 2119
Msp20I	TGGCCA	1 cut(s)	1803
MspI	CCGG	3 cut(s)	111, 613, 1889
MspR9I	CCNGG	5 cut(s)	322, 508, 1638, 1662, 1832
MunI	CAATTG	4 cut(s)	1265, 1654, 1732, 2038
Mva1269I	GAATGC	4 cut(s)	344, 2194, 2326, 2335
MvaI	CCWGG	5 cut(s)	322, 508, 1638, 1662, 1832
MwoI	GCNNNNNNNGC	5 cut(s)	588, 1692, 1751, 2130, 2330
NarI	GGCGCC	1 cut(s)	622
NdeI	CATATG	2 cut(s)	1112, 1249
NdeII	GATC	8 cut(s)	79, 193, 792, 1162, 1339, 2157, 2162, 2368
NlaIV	GGNNCC	3 cut(s)	214, 623, 1332
NmuCI	GTSAC	5 cut(s)	712, 844, 1104, 2141, 2416
NsiI	ATGCAT	1 cut(s)	2196
NspI	RCATGY	4 cut(s)	610, 905, 946, 2194
PaeI	GCATGC	1 cut(s)	905
PagI	TCATGA	1 cut(s)	1569
PctI	GAATGC	4 cut(s)	344, 2194, 2326, 2335
PdmI	GAANNNNTTC	2 cut(s)	125, 1314
PfeI	GAWTC	4 cut(s)	219, 672, 776, 2252
PflMI	CCANNNNNTGG	1 cut(s)	209
PfoI	TCCNGGA	1 cut(s)	1660
PleI	GAGTC	2 cut(s)	682, 1503
PluTI	GGCGCC	1 cut(s)	625
PpsI	GAGTC	2 cut(s)	682, 1503
PshAI	GACNNNNGTC	1 cut(s)	1656
PshBI	ATTAAT	2 cut(s)	8, 2237
Psp124BI	GAGCTC	1 cut(s)	641
Psp6I	CCWGG	5 cut(s)	320, 506, 1636, 1660, 1830
PspGI	CCWGG	5 cut(s)	320, 506, 1636, 1660, 1830
PspN4I	GGNNCC	3 cut(s)	214, 623, 1332
PspPI	GGNCC	3 cut(s)	1093, 1330, 1834
PsuI	RGATCY	1 cut(s)	1339
RsaI	GTAC	8 cut(s)	25, 497, 600, 729, 806, 857, 1292, 2408
RsaNI	GTAC	8 cut(s)	24, 496, 599, 728, 805, 856, 1291, 2407
RseI	CAYNNNNRTG	7 cut(s)	98, 710, 851, 1111, 1583, 1704, 2119
SacI	GAGCTC	1 cut(s)	641
SaqAI	TTAA	6 cut(s)	8, 594, 1373, 1643, 1961, 2237
Sau3AI	GATC	8 cut(s)	79, 193, 792, 1162, 1339, 2157, 2162, 2368
Sau96I	GGNCC	3 cut(s)	1093, 1330, 1834
ScaI	AGTACT	2 cut(s)	600, 1292
SchI	GAGTC	2 cut(s)	682, 1503
ScrFI	CCNGG	5 cut(s)	322, 508, 1638, 1662, 1832
SduI	GDGCHC	3 cut(s)	641, 698, 2126
SexAI	ACCWGGT	1 cut(s)	506
SfaNI	GCATC	7 cut(s)	355, 912, 1207, 1273, 1673, 1696, 1896
SfcI	CTRYAG	2 cut(s)	64, 2299
SfoI	GGCGCC	1 cut(s)	623
SinI	GGWCC	1 cut(s)	1093
SmiMI	CAYNNNNRTG	7 cut(s)	98, 710, 851, 1111, 1583, 1704, 2119
SmlI	CTYRAG	3 cut(s)	656, 1118, 2092
SmoI	CTYRAG	3 cut(s)	656, 1118, 2092
SphI	GCATGC	1 cut(s)	905
SsiI	CCGC	4 cut(s)	318, 1079, 1286, 1513
SspDI	GGCGCC	1 cut(s)	621
SspI	AATATT	2 cut(s)	1384, 1503
SspMI	CTAG	6 cut(s)	189, 1755, 1896, 1919, 2130, 2280
SstI	GAGCTC	1 cut(s)	641
StyD4I	CCNGG	5 cut(s)	320, 506, 1636, 1660, 1830
StyI	CCWWGG	2 cut(s)	914, 1237
TaaI	ACNGT	4 cut(s)	65, 398, 1039, 1477
TaqI	TCGA	8 cut(s)	336, 381, 444, 519, 670, 930, 1007, 1227
TatI	WGTACW	6 cut(s)	23, 598, 727, 855, 1290, 2406
TauI	GCSGC	1 cut(s)	1081
TfiI	GAWTC	4 cut(s)	219, 672, 776, 2252
Tru1I	TTAA	6 cut(s)	8, 594, 1373, 1643, 1961, 2237
Tru9I	TTAA	6 cut(s)	8, 594, 1373, 1643, 1961, 2237
TscAI	CASTG	6 cut(s)	538, 807, 853, 889, 1530, 2126
TseFI	GTSAC	5 cut(s)	712, 844, 1104, 2141, 2416
TseI	GCWGC	9 cut(s)	177, 579, 1046, 1061, 1144, 1709, 1820, 2224, 2266
Tsp45I	GTSAC	5 cut(s)	712, 844, 1104, 2141, 2416
TspGWI	ACGGA	1 cut(s)	1352
TspRI	CASTG	6 cut(s)	538, 807, 853, 889, 1530, 2126
Van91I	CCANNNNNTGG	1 cut(s)	209
VneI	GTGCAC	1 cut(s)	694
VpaK11BI	GGWCC	1 cut(s)	1093
VspI	ATTAAT	2 cut(s)	8, 2237
XagI	CCTNNNNNAGG	1 cut(s)	1665
XapI	RAATTY	7 cut(s)	121, 811, 1055, 1417, 1519, 1812, 2401
XceI	RCATGY	4 cut(s)	610, 905, 946, 2194
XmnI	GAANNNNTTC	2 cut(s)	125, 1314
XspI	CTAG	6 cut(s)	189, 1755, 1896, 1919, 2130, 2280
ZrmI	AGTACT	2 cut(s)	600, 1292
Zsp2I	ATGCAT	1 cut(s)	2196

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.