Rroxscaffold_2G00093770

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
15150405 .. 15153322
2918 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00093770.1

Sequence Viewer

Length: 1191 bp
ATGTTCGCTACGCACTCGTCATCGTCTAATCCTCGCTATCGCACTCGCTACACTCATACTCGCAAGTCTGTTTCTAAACGAGATAATGATAAAAGAGATGTAAACCTGGAGAGGCTTGAGGCCGGTCTTGCTACTGCTAGAGAGTTGATAAGGGAAGCAACAAAGCTAAACCAAACAAGTTCACTTGAAGATGCCGAATATGTTCCACAAGGCGATCTTTACAGGAACGCCTATGCCTTTCACCGGAGCTACCTCTTAATGGAAAGCCTTTTTAAGATTTTTGTCTATGAAGAGGGAGAGCCTCCAATATTCCACAATGGTCCTTGCAAGAACATATACTCTATGGAAGGACTCTTTCTCAGCTTCATGGAAACTGATACCAAATTCCGAACCTTGCATCCAGAAAAGGCTCATGTCTATTTCCTTCCTTTTAGTGTGGTGATGATCATTGAGTACCTCTTTCGTCCAATTATTCGAGACAAAGCTGTTTTACAACGCACCGTGGTTGATTATGTTCGAGTCATATCCAACAAGTACCCATTTTGGAATAGAAGCCATGGGGTTGATCATGTAGTGCTTTCTTGCCATGATTGGGGGCCTAGGGCGACATGGTATGTTCGACAGCTATACTTTGTTGCCATTCGTGTACTATGCAATGCGAACACCTCCGAGCACTTCAACCCTAAGAAAGATGCGTCATTCCCCGAAATCAATCTTAAAACGGGACGAATGCATGGACGAATCAGACCATTGCTTTTCCAACACTGGAAAGAAAAAGATAAAGATCTACTGGTTTATGAAACACTCCCCGAGAAATTTTCGTACCATGACATGTTGAAGAAAAGCAAGTATTGCATTTGCCCAAGCGGTCATGAAGTCGCTAGTCCAAGGATCGTAGGGGCAATTTATGCAGAGTGTGTTCCAGTATTGATTTCACAGCATTATGTTCTGCCTTTCAGTGATGTTCTAGATTGGAAGTCCTTTTCTATTCAAGTATCTGTGAGTGAAATACCACAGCTTAAGGAAATCTTAATGGGGATTCCTGAAGAGAAGTATAGAAGAATGCAGGAAAGAGTGAAACAAGTGCAAAGGCATTTTGTGGTGAACAATCCCCCCAAGAGATTTGATGTTTTTCACATGATAATTCATTCAATATGGCTTAGGAGACTCAATGTACGCATTTATAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

396

Amino Acids

46.83

Weight (kDa)

9.37

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 88 - 237 4.5e-18 Exostosin GT47 domain
Exostosin_GT47 PF03016 244 - 345 8.2e-27 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012729)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 867
AclWI GGATC 1 cut(s) 899
AcsI RAATTY 2 cut(s) 383, 815
AcuI CTGAAG 1 cut(s) 1065
AfaI GTAC 5 cut(s) 455, 536, 648, 824, 1176
AfiI CCNNNNNNNGG 3 cut(s) 243, 259, 592
AflII CTTAAG 1 cut(s) 1019
AflIII ACRYGT 1 cut(s) 831
AgsI TTSAA 5 cut(s) 188, 679, 838, 992, 1152
AjnI CCWGG 1 cut(s) 105
AloI GAACNNNNNNTCC 2 cut(s) 382, 414
AluBI AGCT 6 cut(s) 166, 249, 363, 485, 625, 1018
AluI AGCT 6 cut(s) 166, 249, 363, 485, 625, 1018
Alw21I GWGCWC 1 cut(s) 675
Alw26I GTCTC 2 cut(s) 471, 1159
AlwI GGATC 1 cut(s) 899
Ama87I CYCGRG 1 cut(s) 809
AoxI GGCC 2 cut(s) 120, 596
ApoI RAATTY 2 cut(s) 383, 815
Asp700I GAANNNNTTC 1 cut(s) 201
AspA2I CCTAGG 1 cut(s) 599
AspS9I GGNCC 2 cut(s) 320, 596
AsuHPI GGTGA 3 cut(s) 233, 451, 1114
AvaI CYCGRG 1 cut(s) 809
AvaII GGWCC 1 cut(s) 320
AvrII CCTAGG 1 cut(s) 599
Bbv12I GWGCWC 1 cut(s) 675
BciT130I CCWGG 1 cut(s) 107
BclI TGATCA 2 cut(s) 444, 565
BcoDI GTCTC 2 cut(s) 471, 1159
BfaI CTAG 4 cut(s) 138, 600, 882, 968
BfrI CTTAAG 1 cut(s) 1019
BglII AGATCT 1 cut(s) 784
BlnI CCTAGG 1 cut(s) 599
Bme1390I CCNGG 1 cut(s) 107
Bme18I GGWCC 1 cut(s) 320
BmeT110I CYCGRG 1 cut(s) 809
BmgT120I GGNCC 2 cut(s) 320, 596
BmiI GGNNCC 1 cut(s) 597
BmrFI CCNGG 1 cut(s) 107
BmsI GCATC 3 cut(s) 181, 406, 682
BpmI CTGGAG 1 cut(s) 128
Bpu10I CCTNAGC 1 cut(s) 1160
BpuEI CTTGAG 1 cut(s) 137
BsaBI GATNNNNATC 1 cut(s) 783
BsaJI CCNNGG 4 cut(s) 501, 556, 599, 887
BsaWI WCCGGW 1 cut(s) 243
Bsc4I CCNNNNNNNGG 3 cut(s) 243, 259, 592
Bse118I RCCGGY 1 cut(s) 122
Bse1I ACTGG 3 cut(s) 770, 795, 923
Bse3DI GCAATG 2 cut(s) 661, 749
Bse8I GATNNNNATC 1 cut(s) 783
BseBI CCWGG 1 cut(s) 107
BseDI CCNNGG 4 cut(s) 501, 556, 599, 887
BseGI GGATG 1 cut(s) 397
BseJI GATNNNNATC 1 cut(s) 783
BseLI CCNNNNNNNGG 3 cut(s) 243, 259, 592
BseMI GCAATG 2 cut(s) 661, 749
BseMII CTCAG 1 cut(s) 373
BseNI ACTGG 3 cut(s) 770, 795, 923
BshFI GGCC 2 cut(s) 122, 598
BsiHKAI GWGCWC 1 cut(s) 675
BsiHKCI CYCGRG 1 cut(s) 809
BsiSI CCGG 2 cut(s) 123, 244
BslFI GGGAC 1 cut(s) 738
BslI CCNNNNNNNGG 3 cut(s) 243, 259, 592
BsmAI GTCTC 2 cut(s) 471, 1159
BsmFI GGGAC 1 cut(s) 738
BsmI GAATGC 2 cut(s) 735, 1068
BsnI GGCC 2 cut(s) 122, 598
BsoBI CYCGRG 1 cut(s) 809
Bsp1286I GDGCHC 1 cut(s) 675
Bsp143I GATC 5 cut(s) 214, 444, 565, 784, 891
Bsp19I CCATGG 1 cut(s) 556
BspACI CCGC 1 cut(s) 867
BspANI GGCC 2 cut(s) 122, 598
BspCNI CTCAG 1 cut(s) 372
BspHI TCATGA 1 cut(s) 871
BspLI GGNNCC 1 cut(s) 597
BspPI GGATC 1 cut(s) 899
BspTI CTTAAG 1 cut(s) 1019
BsrDI GCAATG 2 cut(s) 661, 749
BsrFI RCCGGY 1 cut(s) 122
BsrI ACTGG 3 cut(s) 770, 795, 923
BssAI RCCGGY 1 cut(s) 122
BssECI CCNNGG 4 cut(s) 501, 556, 599, 887
BssMI GATC 5 cut(s) 214, 444, 565, 784, 891
BssT1I CCWWGG 3 cut(s) 556, 599, 887
Bst2UI CCWGG 1 cut(s) 107
Bst4CI ACNGT 1 cut(s) 502
Bst6I CTCTTC 2 cut(s) 285, 1041
BstAFI CTTAAG 1 cut(s) 1019
BstAPI GCANNNNNTGC 2 cut(s) 852, 908
BstDEI CTNAG 3 cut(s) 359, 684, 1160
BstDSI CCRYGG 2 cut(s) 501, 556
BstF5I GGATG 1 cut(s) 397
BstKTI GATC 5 cut(s) 217, 447, 568, 787, 894
BstMAI GTCTC 2 cut(s) 471, 1159
BstMBI GATC 5 cut(s) 214, 444, 565, 784, 891
BstMWI GCNNNNNNNGC 3 cut(s) 128, 852, 908
BstNI CCWGG 1 cut(s) 107
BstNSI RCATGY 1 cut(s) 835
BstSCI CCNGG 1 cut(s) 105
BstX2I RGATCY 1 cut(s) 784
BstYI RGATCY 1 cut(s) 784
BsuRI GGCC 2 cut(s) 122, 598
BtgI CCRYGG 2 cut(s) 501, 556
BtsCI GGATG 1 cut(s) 397
BtsIMutI CAGTG 2 cut(s) 763, 964
CciI TCATGA 1 cut(s) 871
Cfr10I RCCGGY 1 cut(s) 122
Cfr13I GGNCC 2 cut(s) 320, 596
CseI GACGC 1 cut(s) 684
Csp6I GTAC 5 cut(s) 454, 535, 647, 823, 1175
CviQI GTAC 5 cut(s) 454, 535, 647, 823, 1175
DdeI CTNAG 3 cut(s) 359, 684, 1160
DpnI GATC 5 cut(s) 216, 446, 567, 786, 893
DpnII GATC 5 cut(s) 214, 444, 565, 784, 891
Eam1104I CTCTTC 2 cut(s) 285, 1041
EarI CTCTTC 2 cut(s) 285, 1041
Eco130I CCWWGG 3 cut(s) 556, 599, 887
Eco47I GGWCC 1 cut(s) 320
Eco57I CTGAAG 1 cut(s) 1065
Eco88I CYCGRG 1 cut(s) 809
EcoO109I RGGNCCY 1 cut(s) 596
EcoRII CCWGG 1 cut(s) 105
EcoT14I CCWWGG 3 cut(s) 556, 599, 887
EcoT22I ATGCAT 1 cut(s) 735
ErhI CCWWGG 3 cut(s) 556, 599, 887
FalI AAGNNNNNCTT 4 cut(s) 201, 233, 1013, 1045
FaqI GGGAC 1 cut(s) 738
FbaI TGATCA 2 cut(s) 444, 565
FokI GGATG 1 cut(s) 384
FspBI CTAG 4 cut(s) 138, 600, 882, 968
GsuI CTGGAG 1 cut(s) 128
HaeIII GGCC 2 cut(s) 122, 598
HapII CCGG 2 cut(s) 123, 244
HgaI GACGC 1 cut(s) 684
HinfI GANTC 5 cut(s) 351, 519, 741, 1039, 1167
HpaII CCGG 2 cut(s) 123, 244
HphI GGTGA 3 cut(s) 233, 451, 1114
Hpy166II GTNNAC 4 cut(s) 103, 182, 647, 1105
Hpy188I TCNGA 3 cut(s) 389, 670, 746
Hpy188III TCNNGA 5 cut(s) 401, 476, 872, 968, 1043
Hpy8I GTNNAC 4 cut(s) 103, 182, 647, 1105
HpyAV CCTTC 2 cut(s) 341, 434
HpyCH4III ACNGT 1 cut(s) 502
HpyCH4V TGCA 8 cut(s) 327, 397, 654, 733, 855, 911, 1066, 1087
HpyF10VI GCNNNNNNNGC 3 cut(s) 128, 852, 908
HpyF3I CTNAG 3 cut(s) 359, 684, 1160
Ksp22I TGATCA 2 cut(s) 444, 565
Kzo9I GATC 5 cut(s) 214, 444, 565, 784, 891
LmnI GCTCC 1 cut(s) 246
LweI GCATC 3 cut(s) 181, 406, 682
MaeI CTAG 4 cut(s) 138, 600, 882, 968
MalI GATC 5 cut(s) 216, 446, 567, 786, 893
MboI GATC 5 cut(s) 214, 444, 565, 784, 891
MboII GAAGA 5 cut(s) 200, 302, 850, 1058, 1071
MflI RGATCY 1 cut(s) 784
MhlI GDGCHC 1 cut(s) 675
MluCI AATT 5 cut(s) 383, 468, 815, 903, 1143
MlyI GAGTC 3 cut(s) 345, 528, 1161
MmeI TCCRAC 2 cut(s) 552, 784
MnlI CCTC 8 cut(s) 42, 105, 112, 263, 286, 312, 467, 676
Mph1103I ATGCAT 1 cut(s) 735
MroXI GAANNNNTTC 1 cut(s) 201
MseI TTAA 5 cut(s) 257, 273, 717, 1020, 1031
MspCI CTTAAG 1 cut(s) 1019
MspI CCGG 2 cut(s) 123, 244
MspR9I CCNGG 1 cut(s) 107
Mva1269I GAATGC 2 cut(s) 735, 1068
MvaI CCWGG 1 cut(s) 107
MwoI GCNNNNNNNGC 3 cut(s) 128, 852, 908
NcoI CCATGG 1 cut(s) 556
NdeII GATC 5 cut(s) 214, 444, 565, 784, 891
NlaIV GGNNCC 1 cut(s) 597
NsiI ATGCAT 1 cut(s) 735
NspI RCATGY 1 cut(s) 835
PagI TCATGA 1 cut(s) 871
PciI ACATGT 1 cut(s) 831
PctI GAATGC 2 cut(s) 735, 1068
PdmI GAANNNNTTC 1 cut(s) 201
PfeI GAWTC 2 cut(s) 741, 1039
PleI GAGTC 3 cut(s) 345, 527, 1161
PpsI GAGTC 3 cut(s) 345, 527, 1161
PscI ACATGT 1 cut(s) 831
Psp6I CCWGG 1 cut(s) 105
PspGI CCWGG 1 cut(s) 105
PspN4I GGNNCC 1 cut(s) 597
PspPI GGNCC 2 cut(s) 320, 596
PsuI RGATCY 1 cut(s) 784
RsaI GTAC 5 cut(s) 455, 536, 648, 824, 1176
RsaNI GTAC 5 cut(s) 454, 535, 647, 823, 1175
SaqAI TTAA 5 cut(s) 257, 273, 717, 1020, 1031
Sau3AI GATC 5 cut(s) 214, 444, 565, 784, 891
Sau96I GGNCC 2 cut(s) 320, 596
SchI GAGTC 3 cut(s) 345, 528, 1161
ScrFI CCNGG 1 cut(s) 107
SduI GDGCHC 1 cut(s) 675
SfaNI GCATC 3 cut(s) 181, 406, 682
SinI GGWCC 1 cut(s) 320
SmlI CTYRAG 2 cut(s) 116, 1019
SmoI CTYRAG 2 cut(s) 116, 1019
Sse9I AATT 5 cut(s) 383, 468, 815, 903, 1143
SsiI CCGC 1 cut(s) 867
SspI AATATT 1 cut(s) 309
SspMI CTAG 4 cut(s) 138, 600, 882, 968
StyD4I CCNGG 1 cut(s) 105
StyI CCWWGG 3 cut(s) 556, 599, 887
TaaI ACNGT 1 cut(s) 502
TaqI TCGA 3 cut(s) 475, 517, 619
TasI AATT 5 cut(s) 383, 468, 815, 903, 1143
TatI WGTACW 1 cut(s) 646
TfiI GAWTC 2 cut(s) 741, 1039
Tru1I TTAA 5 cut(s) 257, 273, 717, 1020, 1031
Tru9I TTAA 5 cut(s) 257, 273, 717, 1020, 1031
TscAI CASTG 2 cut(s) 770, 964
TspDTI ATGAA 5 cut(s) 303, 355, 813, 888, 1136
TspRI CASTG 2 cut(s) 770, 964
Vha464I CTTAAG 1 cut(s) 1019
VpaK11BI GGWCC 1 cut(s) 320
XapI RAATTY 2 cut(s) 383, 815
XbaI TCTAGA 1 cut(s) 967
XceI RCATGY 1 cut(s) 835
XmaJI CCTAGG 1 cut(s) 599
XmnI GAANNNNTTC 1 cut(s) 201
XspI CTAG 4 cut(s) 138, 600, 882, 968
Zsp2I ATGCAT 1 cut(s) 735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.