Rorug02G0447000

Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0012729
Physical Location & Seq
Reverse (-)
57334770 .. 57341733
6964 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0447000.1

Sequence Viewer

Length: 3036 bp
ATGGCGGACAGAAAGAAATCTAAGAAACCCACAAACAACAACATGGAGCACCTCAAGACTGACATAGCCTCCTTCGCTTCCTCCCTCGGCCTCTCTACCTCTCTCCCTCCCTCTGATTCTTCAGGCTTCAACGATGTCGATTTCCGCAACCCCAAAAAACCCCAACAGAGGCCTAAACCCTCAAAACCCCAGAATTCCAAACCCCAAAATCGAAACACCACCCAGAACTTCAAACCCAATCTTTCGAAACCCCCTTTTCCTTCACTCCCTGATGTCACCAGCAACAGTGAAAAAGCAAAGACCTTTGAGAATCTTCCGAAGCTGCCGTTGATTTCAGCCACCAACATTGGAGTTTGGTACGAAGAAGCTGAAGAATTGGAAGGCAAAGTGGTCGGGAAGATGAAGAAAGCCGAGGCAAGGAGTGACAAGGAGTGGAGTGGTGAGGTGGCCAAGAAGCGAAAGCTTGGAGAGAGGTTGATGGCACAGTACACGGCGGATTACGAGGCTTCGAAAGGGAAGAGTGGGGATATCAAGCTGTTGCTGACCACACAGAGGTCAGGGACTGCTTCTGATAAGATTTCGGCGTTTTCGGTGTTGGTTGGGGATGATCCCATTGCCAATTTGAGGTCTTTGGATGCACTTTTAGGAATGGTAGCATCAAAAGTAGGAAAGCGATACGCATTTGCAGGTTTTGATGCATTGAGGGAGTTGTTTCTTACAAGTTTATTACCCGATCGTAAGCTTAAGAGCCTCTTACAGCGGCCTTTAAATGATCTTCCTGAGACAAAAGATGGTTATTCTCTTCTGCTTCTGTGGTATTGGGAGGAATGCTTGAAACAAAGGTATGAACGCTTTGTTATTGCTCTTGAGGAAGCATCAAGAGATATGTTACCTGAACTCAAAAACAAGGCATTGAAGACTATATATGTATTACTCAAGAGTAAATCGGAGCAAGAGCGAAGATTACTGTCTGCCCTAGTTAATAAACTGGGAGATCCTAAAAATAAGGGTGCTTCAGATGCTGATTTTCACTTATCAAACCTTTTGCGTGACCATCCAAACATGAAGGCTGTGGTGATTGATGAGGTGGACTCTTTTCTCTTTCGGCCGCATTTAAACATACAAGCAAAGTACCATGCGGTTAACTTTTTGAGCCAAATTCAACTAAGAAATAAAGGAGATGGACCAAAGGTGGCAAAAAGTTTGGTAGATGTATATTTTGCACTTTTCAAGGTACTGATTTCTGAGGCAGGTGGAGGTGAAAAGGACGAGAAAGTAGGGGGTAAAAAACCAGCCGGTTCTCGTAAGGATGGCAAAGGCAATAGTTCATCAGATTCTCATTTTGAATTGGATTCACGTCTTCTATCAGCTCTATTAATGGGAGTCAATAGAGCATTCCCATATGTTTCGAAGAATGAGGCTGATGACGTTGTTGAGGCCCAAACACCAACACTTTTCCATTTGGTTCATTCTACTAACTTCAATGTAGGAGTTCAAGCACTGATGCTTCTTCATCATATCTCATCTAAGAATCAAATTGTCAGTGATAGGTTTTACCGAGCCTTGTACTCAAAACTACTCCTTCCAGCTGCCATGAATACTTCCAAGGCTGAAACATTTATTGGACTTCTTCTGAGAGCAATGAAATCTGATGTCAATGTGAAGCGTACAGCTGCTTTTGCAAAACGTCTACTGCAGGTCGCCCTTCAACAGCCGCCTCAATATGCATGTGGATGCCTCTTTCTTCTCTCTGAAGTTCTAAAAGCACGGCCCCCCTTGTGGAACATGGTGCTCCAAAACGAGTCAGTTGATGATGACCTTGAGCATTTTGAAGATGTGATAGAAGAAACCGATAATGAACCCAGCCCTGTCCTGGAGAAACAAGAAGTTGAACTTGTTCATAACAGTGATGAAAAAAGTGATACCGTCAATTCTGATCATGATTCTTCAGAAGATGATATTGACTCTTCCGCCTCATATTCTGAAGATGAAGCTTCCGATGAAGCAGATGAGTTTCATTTTAGAAATGATTCAAAGGACTCCAAGACGGTGCCTGATAGTAGCGTGCAGCAACCACAAGTAGTATCCTCTGAGAAGACTTCACTACCTGGAGGCTATGATCCACGACACAGAGAGCCCTCTTACTGCAATGCAGATCGTGTAAGCTGGTGGGAGTTGACGGTACTTGCTTCTCATGTGCACCCTTCAGTTTCTACCATGGCAAAGACGCTTCTCTCTGGGGCGAATATTGTCTATAATGGAAACCCACTGAATGACCTATCACTTACTGCTTTTCTGGACAAGTTTATGGAGAAAAAACCAAAGGCAAGCACATGGCATGGTGGTTCGCAAATTGAACCTGCGAAAAAGCTTGACATGACCAACCGATTCATAGGACCAGAAATCCTCTCATTGGCTGAAGAAGATGTACCTGCAGAAGATCTCGTCTTTCACAAGTTCTACATGAATAAAATGAATACTTCGAAGAAACCAAAGAAGAAGAAGAAGAAGGCAACAACAGAAGATGAAGATGCCGCGGAGTTGTTTGATGTGGATGGTGGTGGTGATGATGAGAGTGATAATGAAGAGATTGACAATATGCTGGATTCTGCTGGTGTTGCCATGGATGCAGATGGCGACTATGATTATGATGATCTAGACCAAGTAGCCAATGACGACGATGAAGACTTGGTTGGTAATGTTAGTGATGTCAGTGATGCTGATCTTGACCTGCCCTCAGATATTGCAGAGGGTGAAGATTTTGATACCACTGCAAACAGTGATGAAAGTGATGATGGCGATGATGCTATTGATATAGGAGATGTTGATGACGACGAGGTTGAGGATGAGGATGAGGATGTCCATATTGAGAGTGTCCAAGGGAAAAGTAAACGGAAGCGTGGGAAGGCAGCAGCATCCCCATTTGCGAGTCTGGAAGAATATGAGCATTTGTTTGACGAGGACGCCCCTGCTGAGAAGGAATCTAAAAGCAAGAAGAAATCCAAGCCCCGAAAGAAGAGAAAGTCGTCTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

1011

Amino Acids

112.39

Weight (kDa)

5.05

Isoelectric Point (pI)

41.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBF PF03914 498 - 741 5.7e-44 CBF/Mak21 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012729)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07620
fragaria_vesca FvH4_6g40270 FvH4_6g40270
malus_domestica MD17G1120500.v1.1
prunus_persica Prupe.3G193400_v2.0.a1
pyrus_communis pycom17g11120
rosa_chinensis RchiOBHm_Chr2g0155401
rosa_laevigata RLG00000020836
rosa_multiflora Rmu_sc0012066.1_g000012
rosa_roxburghii Rroxscaffold_2G00093770
rosa_rugosa Rorug02G0446800 Rorug02G0446900 Rorug02G0447000
rosa_samantha Rh2AG513200 Rh2BG523800 Rh2CG498200 Rh2DG533500
rosa_wichuraiana Rw2G042170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1241
Acc36I ACCTGC 6 cut(s) 677, 1241, 1687, 2368, 2440, 2739
AccB1I GGYRCC 1 cut(s) 2050
AccI GTMKAC 1 cut(s) 1690
AccII CGCG 1 cut(s) 2537
AclWI GGATC 3 cut(s) 602, 989, 2114
AcoI YGGCCR 2 cut(s) 447, 1106
AcsI RAATTY 2 cut(s) 193, 1158
AcuI CTGAAG 8 cut(s) 105, 390, 999, 1773, 1932, 2004, 2190, 2439
AcyI GRCGYC 1 cut(s) 2964
AfaI GTAC 8 cut(s) 359, 488, 1133, 1236, 1568, 1669, 2184, 2430
AfiI CCNNNNNNNGG 7 cut(s) 168, 417, 552, 624, 1779, 1873, 2413
AflII CTTAAG 1 cut(s) 743
AjiI CACGTC 1 cut(s) 1358
AjnI CCWGG 2 cut(s) 1872, 2107
AjuI GAANNNNNNNTTGG 4 cut(s) 1605, 1637, 2676, 2708
Alw21I GWGCWC 3 cut(s) 51, 1794, 2202
Alw26I GTCTC 1 cut(s) 776
Alw44I GTGCAC 1 cut(s) 2198
AlwI GGATC 3 cut(s) 602, 989, 2114
AlwNI CAGNNNCTG 2 cut(s) 563, 1022
AoxI GGCC 7 cut(s) 88, 170, 447, 761, 1106, 1437, 1769
ApaLI GTGCAC 1 cut(s) 2198
ApeKI GCWGC 6 cut(s) 322, 1589, 1673, 2068, 2909, 2912
ApoI RAATTY 2 cut(s) 193, 1158
AseI ATTAAT 1 cut(s) 1376
Asp700I GAANNNNTTC 2 cut(s) 1896, 2029
AspS9I GGNCC 4 cut(s) 1184, 1438, 1770, 2396
AsuHPI GGTGA 6 cut(s) 268, 452, 1087, 1271, 2576, 2765
AsuII TTCGAA 4 cut(s) 245, 509, 1409, 2483
AvaII GGWCC 2 cut(s) 1184, 2396
BaeGI GKGCMC 1 cut(s) 2202
BalI TGGCCA 1 cut(s) 449
BanI GGYRCC 1 cut(s) 2050
BanII GRGCYC 1 cut(s) 2139
BarI GAAGNNNNNNTAC 2 cut(s) 2412, 2444
BbsI GAAGAC 4 cut(s) 923, 1352, 2102, 2691
Bbv12I GWGCWC 3 cut(s) 51, 1794, 2202
BbvI GCAGC 6 cut(s) 309, 1576, 1660, 2080, 2921, 2924
BccI CCATC 8 cut(s) 472, 785, 1062, 1175, 1304, 2549, 2627, 2789
BceAI ACGGC 3 cut(s) 310, 507, 1784
BcgI CGANNNNNNTGC 2 cut(s) 373, 407
BciT130I CCWGG 2 cut(s) 1874, 2109
BciVI GTATCC 1 cut(s) 2095
BclI TGATCA 1 cut(s) 1936
BcoDI GTCTC 1 cut(s) 776
BfaI CTAG 2 cut(s) 977, 2657
BfmI CTRYAG 2 cut(s) 1694, 2433
BfrI CTTAAG 1 cut(s) 743
BfuAI ACCTGC 6 cut(s) 677, 1241, 1687, 2368, 2440, 2739
BfuI GTATCC 1 cut(s) 2095
BglII AGATCT 1 cut(s) 2440
Bme1390I CCNGG 2 cut(s) 1874, 2109
Bme18I GGWCC 2 cut(s) 1184, 2396
BmgBI CACGTC 1 cut(s) 1358
BmgT120I GGNCC 4 cut(s) 1184, 1438, 1770, 2396
BmiI GGNNCC 2 cut(s) 1772, 2052
BmrFI CCNGG 2 cut(s) 1874, 2109
BmrI ACTGGG 1 cut(s) 998
BmuI ACTGGG 1 cut(s) 998
BpiI GAAGAC 4 cut(s) 923, 1352, 2102, 2691
BplI GAGNNNNNCTC 2 cut(s) 1076, 1108
BpmI CTGGAG 2 cut(s) 1895, 2130
Bpu14I TTCGAA 4 cut(s) 245, 509, 1409, 2483
BpuEI CTTGAG 4 cut(s) 38, 887, 920, 1841
BsaBI GATNNNNATC 1 cut(s) 2721
BsaHI GRCGYC 1 cut(s) 2964
BsaJI CCNNGG 7 cut(s) 85, 411, 1605, 2217, 2535, 2622, 2878
BsaXI ACNNNNNCTCC 2 cut(s) 53, 83
Bsc4I CCNNNNNNNGG 7 cut(s) 168, 417, 552, 624, 1779, 1873, 2413
Bse118I RCCGGY 1 cut(s) 1295
Bse1I ACTGG 1 cut(s) 993
Bse3DI GCAATG 3 cut(s) 612, 1647, 2155
Bse8I GATNNNNATC 1 cut(s) 2721
BseBI CCWGG 2 cut(s) 1874, 2109
BseDI CCNNGG 7 cut(s) 85, 411, 1605, 2217, 2535, 2622, 2878
BseJI GATNNNNATC 1 cut(s) 2721
BseLI CCNNNNNNNGG 7 cut(s) 168, 417, 552, 624, 1779, 1873, 2413
BseMI GCAATG 3 cut(s) 612, 1647, 2155
BseMII CTCAG 6 cut(s) 771, 1236, 1625, 2082, 2751, 2964
BseNI ACTGG 1 cut(s) 993
BseSI GKGCMC 1 cut(s) 2202
BseX3I CGGCCG 1 cut(s) 1106
BseXI GCAGC 6 cut(s) 309, 1576, 1660, 2080, 2921, 2924
BseYI CCCAGC 1 cut(s) 1862
BsgI GTGCAG 1 cut(s) 2087
Bsh1236I CGCG 1 cut(s) 2537
Bsh1285I CGRYCG 2 cut(s) 736, 1109
BshFI GGCC 7 cut(s) 90, 172, 449, 763, 1108, 1439, 1771
BshNI GGYRCC 1 cut(s) 2050
BsiEI CGRYCG 2 cut(s) 736, 1109
BsiHKAI GWGCWC 3 cut(s) 51, 1794, 2202
BsiSI CCGG 1 cut(s) 1296
BslFI GGGAC 1 cut(s) 574
BslI CCNNNNNNNGG 7 cut(s) 168, 417, 552, 624, 1779, 1873, 2413
BsmAI GTCTC 1 cut(s) 776
BsmFI GGGAC 1 cut(s) 574
BsmI GAATGC 2 cut(s) 833, 1394
BsnI GGCC 7 cut(s) 90, 172, 449, 763, 1108, 1439, 1771
Bsp119I TTCGAA 4 cut(s) 245, 509, 1409, 2483
Bsp1286I GDGCHC 4 cut(s) 51, 1794, 2139, 2202
Bsp19I CCATGG 2 cut(s) 2217, 2622
BspANI GGCC 7 cut(s) 90, 172, 449, 763, 1108, 1439, 1771
BspCNI CTCAG 6 cut(s) 772, 1237, 1626, 2083, 2750, 2965
BspFNI CGCG 1 cut(s) 2537
BspHI TCATGA 1 cut(s) 1939
BspLI GGNNCC 2 cut(s) 1772, 2052
BspMAI CTGCAG 2 cut(s) 1698, 2437
BspMI ACCTGC 6 cut(s) 677, 1241, 1687, 2368, 2440, 2739
BspPI GGATC 3 cut(s) 602, 989, 2114
BspT104I TTCGAA 4 cut(s) 245, 509, 1409, 2483
BspT107I GGYRCC 1 cut(s) 2050
BspTI CTTAAG 1 cut(s) 743
BsrDI GCAATG 3 cut(s) 612, 1647, 2155
BsrFI RCCGGY 1 cut(s) 1295
BsrI ACTGG 1 cut(s) 993
BssAI RCCGGY 1 cut(s) 1295
BssECI CCNNGG 7 cut(s) 85, 411, 1605, 2217, 2535, 2622, 2878
BssNI GRCGYC 1 cut(s) 2964
BssT1I CCWWGG 4 cut(s) 1605, 2217, 2622, 2878
Bst2UI CCWGG 2 cut(s) 1874, 2109
Bst4CI ACNGT 8 cut(s) 287, 486, 969, 1907, 1927, 2050, 2182, 2780
Bst6I CTCTTC 5 cut(s) 512, 807, 1972, 2580, 3011
BstACI GRCGYC 1 cut(s) 2964
BstAFI CTTAAG 1 cut(s) 743
BstBI TTCGAA 4 cut(s) 245, 509, 1409, 2483
BstC8I GCNNGC 2 cut(s) 2066, 2329
BstDEI CTNAG 9 cut(s) 21, 780, 1166, 1245, 1527, 1634, 2091, 2737, 2973
BstDSI CCRYGG 3 cut(s) 2217, 2535, 2622
BstFNI CGCG 1 cut(s) 2537
BstMAI GTCTC 1 cut(s) 776
BstMCI CGRYCG 2 cut(s) 736, 1109
BstMWI GCNNNNNNNGC 5 cut(s) 74, 1019, 1679, 2618, 2627
BstNI CCWGG 2 cut(s) 1874, 2109
BstNSI RCATGY 1 cut(s) 1731
BstSCI CCNGG 2 cut(s) 1872, 2107
BstSFI CTRYAG 2 cut(s) 1694, 2433
BstSLI GKGCMC 1 cut(s) 2202
BstUI CGCG 1 cut(s) 2537
BstV1I GCAGC 6 cut(s) 309, 1576, 1660, 2080, 2921, 2924
BstV2I GAAGAC 4 cut(s) 923, 1352, 2102, 2691
BstX2I RGATCY 2 cut(s) 994, 2440
BstYI RGATCY 2 cut(s) 994, 2440
BstZI CGGCCG 1 cut(s) 1106
BsuI GTATCC 1 cut(s) 2095
BsuRI GGCC 7 cut(s) 90, 172, 449, 763, 1108, 1439, 1771
BtgI CCRYGG 3 cut(s) 2217, 2535, 2622
BtgZI GCGATG 1 cut(s) 2814
BtrI CACGTC 1 cut(s) 1358
BtsI GCAGTG 1 cut(s) 2769
BtsIMutI CAGTG 8 cut(s) 292, 1499, 1549, 1912, 2267, 2719, 2769, 2785
BveI ACCTGC 6 cut(s) 677, 1241, 1687, 2368, 2440, 2739
Cac8I GCNNGC 2 cut(s) 2066, 2329
CaiI CAGNNNCTG 2 cut(s) 563, 1022
CciI TCATGA 1 cut(s) 1939
Cfr10I RCCGGY 1 cut(s) 1295
Cfr13I GGNCC 4 cut(s) 1184, 1438, 1770, 2396
Cfr42I CCGCGG 1 cut(s) 2538
CseI GACGC 2 cut(s) 2236, 2972
Csp6I GTAC 8 cut(s) 358, 487, 1132, 1235, 1567, 1668, 2183, 2429
CspCI CAANNNNNGTGG 2 cut(s) 328, 363
CviQI GTAC 8 cut(s) 358, 487, 1132, 1235, 1567, 1668, 2183, 2429
DdeI CTNAG 9 cut(s) 21, 780, 1166, 1245, 1527, 1634, 2091, 2737, 2973
DraI TTTAAA 2 cut(s) 768, 1116
EaeI YGGCCR 2 cut(s) 447, 1106
EagI CGGCCG 1 cut(s) 1106
Eam1104I CTCTTC 5 cut(s) 512, 807, 1972, 2580, 3011
EarI CTCTTC 5 cut(s) 512, 807, 1972, 2580, 3011
EciI GGCGGA 3 cut(s) 20, 509, 1960
EclXI CGGCCG 1 cut(s) 1106
Eco130I CCWWGG 4 cut(s) 1605, 2217, 2622, 2878
Eco147I AGGCCT 1 cut(s) 172
Eco24I GRGCYC 1 cut(s) 2139
Eco32I GATATC 1 cut(s) 529
Eco47I GGWCC 2 cut(s) 1184, 2396
Eco52I CGGCCG 1 cut(s) 1106
Eco57I CTGAAG 8 cut(s) 105, 390, 999, 1773, 1932, 2004, 2190, 2439
EcoRI GAATTC 1 cut(s) 193
EcoRII CCWGG 2 cut(s) 1872, 2107
EcoRV GATATC 1 cut(s) 529
EcoT14I CCWWGG 4 cut(s) 1605, 2217, 2622, 2878
EcoT22I ATGCAT 2 cut(s) 700, 1729
EcoT38I GRGCYC 1 cut(s) 2139
ErhI CCWWGG 4 cut(s) 1605, 2217, 2622, 2878
FalI AAGNNNNNCTT 4 cut(s) 737, 769, 1878, 1910
FaqI GGGAC 1 cut(s) 574
FauNDI CATATG 1 cut(s) 1402
FbaI TGATCA 1 cut(s) 1936
FblI GTMKAC 1 cut(s) 1690
FriOI GRGCYC 1 cut(s) 2139
FspBI CTAG 2 cut(s) 977, 2657
GsaI CCCAGC 1 cut(s) 1866
GsuI CTGGAG 2 cut(s) 1895, 2130
HaeIII GGCC 7 cut(s) 90, 172, 449, 763, 1108, 1439, 1771
HapII CCGG 1 cut(s) 1296
HgaI GACGC 2 cut(s) 2236, 2972
Hin1I GRCGYC 1 cut(s) 2964
HincII GTYRAC 2 cut(s) 1144, 2178
HindII GTYRAC 2 cut(s) 1144, 2178
HindIII AAGCTT 4 cut(s) 461, 740, 1992, 2369
HpaI GTTAAC 1 cut(s) 1144
HpaII CCGG 1 cut(s) 1296
HphI GGTGA 6 cut(s) 268, 452, 1087, 1271, 2576, 2765
Hpy166II GTNNAC 7 cut(s) 489, 1090, 1144, 1691, 2178, 2200, 2891
Hpy8I GTNNAC 7 cut(s) 489, 1090, 1144, 1691, 2178, 2200, 2891
Hpy99I CGWCG 2 cut(s) 2681, 2837
HpyCH4III ACNGT 8 cut(s) 287, 486, 969, 1907, 1927, 2050, 2182, 2780
HpyCH4IV ACGT 3 cut(s) 1357, 1428, 1687
HpyF10VI GCNNNNNNNGC 5 cut(s) 74, 1019, 1679, 2618, 2627
HpyF3I CTNAG 9 cut(s) 21, 780, 1166, 1245, 1527, 1634, 2091, 2737, 2973
HpySE526I ACGT 3 cut(s) 1357, 1428, 1687
Hsp92I GRCGYC 1 cut(s) 2964
Ksp22I TGATCA 1 cut(s) 1936
KspAI GTTAAC 1 cut(s) 1144
KspI CCGCGG 1 cut(s) 2538
LmnI GCTCC 3 cut(s) 46, 949, 1797
Lsp1109I GCAGC 6 cut(s) 309, 1576, 1660, 2080, 2921, 2924
MaeI CTAG 2 cut(s) 977, 2657
MaeII ACGT 3 cut(s) 1357, 1428, 1687
MaeIII GTNAC 4 cut(s) 274, 422, 888, 1049
MflI RGATCY 2 cut(s) 994, 2440
MhlI GDGCHC 4 cut(s) 51, 1794, 2139, 2202
MlsI TGGCCA 1 cut(s) 449
MluCI AATT 8 cut(s) 193, 374, 619, 1158, 1346, 1536, 1930, 2352
MluNI TGGCCA 1 cut(s) 449
MlyI GAGTC 6 cut(s) 1085, 1392, 1811, 1958, 2033, 2938
Mox20I TGGCCA 1 cut(s) 449
Mph1103I ATGCAT 2 cut(s) 700, 1729
MroXI GAANNNNTTC 2 cut(s) 1896, 2029
MscI TGGCCA 1 cut(s) 449
MseI TTAA 7 cut(s) 744, 767, 981, 1115, 1143, 1376, 3034
MslI CAYNNNNRTG 2 cut(s) 1732, 1905
Msp20I TGGCCA 1 cut(s) 449
MspA1I CMGCKG 4 cut(s) 760, 1589, 1673, 2537
MspCI CTTAAG 1 cut(s) 743
MspI CCGG 1 cut(s) 1296
MspR9I CCNGG 2 cut(s) 1874, 2109
Mva1269I GAATGC 2 cut(s) 833, 1394
MvaI CCWGG 2 cut(s) 1874, 2109
MvnI CGCG 1 cut(s) 2537
MwoI GCNNNNNNNGC 5 cut(s) 74, 1019, 1679, 2618, 2627
NcoI CCATGG 2 cut(s) 2217, 2622
NdeI CATATG 1 cut(s) 1402
NlaIV GGNNCC 2 cut(s) 1772, 2052
NmeAIII GCCGAG 2 cut(s) 66, 436
NmuCI GTSAC 3 cut(s) 274, 422, 1049
NsiI ATGCAT 2 cut(s) 700, 1729
NspI RCATGY 1 cut(s) 1731
NspV TTCGAA 4 cut(s) 245, 509, 1409, 2483
PagI TCATGA 1 cut(s) 1939
PaqCI CACCTGC 1 cut(s) 1241
PceI AGGCCT 1 cut(s) 172
PctI GAATGC 2 cut(s) 833, 1394
PdmI GAANNNNTTC 2 cut(s) 1896, 2029
PfoI TCCNGGA 1 cut(s) 1872
Ple19I CGATCG 1 cut(s) 736
PleI GAGTC 6 cut(s) 1085, 1391, 1810, 1958, 2033, 2937
PpsI GAGTC 6 cut(s) 1085, 1391, 1810, 1958, 2033, 2937
PshBI ATTAAT 1 cut(s) 1376
Psp6I CCWGG 2 cut(s) 1872, 2107
PspFI CCCAGC 1 cut(s) 1862
PspGI CCWGG 2 cut(s) 1872, 2107
PspN4I GGNNCC 2 cut(s) 1772, 2052
PspPI GGNCC 4 cut(s) 1184, 1438, 1770, 2396
PstI CTGCAG 2 cut(s) 1698, 2437
PstNI CAGNNNCTG 2 cut(s) 563, 1022
PsuI RGATCY 2 cut(s) 994, 2440
PvuI CGATCG 1 cut(s) 736
PvuII CAGCTG 2 cut(s) 1589, 1673
RsaI GTAC 8 cut(s) 359, 488, 1133, 1236, 1568, 1669, 2184, 2430
RsaNI GTAC 8 cut(s) 358, 487, 1132, 1235, 1567, 1668, 2183, 2429
RseI CAYNNNNRTG 2 cut(s) 1732, 1905
SacII CCGCGG 1 cut(s) 2538
SaqAI TTAA 7 cut(s) 744, 767, 981, 1115, 1143, 1376, 3034
Sau96I GGNCC 4 cut(s) 1184, 1438, 1770, 2396
SchI GAGTC 6 cut(s) 1085, 1392, 1811, 1958, 2033, 2938
ScrFI CCNGG 2 cut(s) 1874, 2109
SduI GDGCHC 4 cut(s) 51, 1794, 2139, 2202
SfcI CTRYAG 2 cut(s) 1694, 2433
Sfr303I CCGCGG 1 cut(s) 2538
SfuI TTCGAA 4 cut(s) 245, 509, 1409, 2483
SgrBI CCGCGG 1 cut(s) 2538
SinI GGWCC 2 cut(s) 1184, 2396
SmiMI CAYNNNNRTG 2 cut(s) 1732, 1905
SmlI CTYRAG 5 cut(s) 53, 743, 866, 935, 1820
SmoI CTYRAG 5 cut(s) 53, 743, 866, 935, 1820
Sse9I AATT 8 cut(s) 193, 374, 619, 1158, 1346, 1536, 1930, 2352
SseBI AGGCCT 1 cut(s) 172
SspI AATATT 1 cut(s) 2248
SspMI CTAG 2 cut(s) 977, 2657
StuI AGGCCT 1 cut(s) 172
StyD4I CCNGG 2 cut(s) 1872, 2107
StyI CCWWGG 4 cut(s) 1605, 2217, 2622, 2878
TaaI ACNGT 8 cut(s) 287, 486, 969, 1907, 1927, 2050, 2182, 2780
TaiI ACGT 3 cut(s) 1360, 1431, 1690
TaqI TCGA 6 cut(s) 138, 211, 245, 509, 1409, 2483
TasI AATT 8 cut(s) 193, 374, 619, 1158, 1346, 1536, 1930, 2352
TatI WGTACW 2 cut(s) 486, 1566
TauI GCSGC 4 cut(s) 763, 1111, 1717, 2537
Tru1I TTAA 7 cut(s) 744, 767, 981, 1115, 1143, 1376, 3034
Tru9I TTAA 7 cut(s) 744, 767, 981, 1115, 1143, 1376, 3034
TscAI CASTG 8 cut(s) 292, 1506, 1549, 1912, 2274, 2719, 2776, 2785
TseFI GTSAC 3 cut(s) 274, 422, 1049
TseI GCWGC 6 cut(s) 322, 1589, 1673, 2068, 2909, 2912
Tsp45I GTSAC 3 cut(s) 274, 422, 1049
TspGWI ACGGA 1 cut(s) 2908
TspRI CASTG 8 cut(s) 292, 1506, 1549, 1912, 2274, 2719, 2776, 2785
Vha464I CTTAAG 1 cut(s) 743
VneI GTGCAC 1 cut(s) 2198
VpaK11BI GGWCC 2 cut(s) 1184, 2396
VspI ATTAAT 1 cut(s) 1376
XapI RAATTY 2 cut(s) 193, 1158
XbaI TCTAGA 1 cut(s) 2656
XceI RCATGY 1 cut(s) 1731
XcmI CCANNNNNNNNNTGG 1 cut(s) 1870
XmiI GTMKAC 1 cut(s) 1690
XmnI GAANNNNTTC 2 cut(s) 1896, 2029
XspI CTAG 2 cut(s) 977, 2657
Zsp2I ATGCAT 2 cut(s) 700, 1729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.