Rh2DG533500

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
76309690 .. 76310405
716 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG533500.1

Sequence Viewer

Length: 315 bp
ATGTTTAATCTCAAAAAGAGTTTCACAGGCAAGTCTGTTTCTAAACGAGATAATGATAAAAGAGATGTAAACCTGGAGAGGCTTGAGGCCGGTCTTGCTACTGCTAGAGAGTTGATAAGGGAAGCAACAAAGCTAAACCAAACAAGTACACTTGAAGATGCCGATTATGTTCCACACGGTGATATTTACAGGAACGCCTATGCCTTTCACCGGTATGTGCCACTTTACTCTGATCAGTATAAGAATCTTGAATATTTCACTACCTACACACGTGATTTTTATGTGTTTTACTTGTATATAGGAGCTACCTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

104

Amino Acids

12.27

Weight (kDa)

7.89

Isoelectric Point (pI)

19.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012729)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcvI CACGTG 1 cut(s) 272
AdeI CACNNNGTG 1 cut(s) 179
AfaI GTAC 1 cut(s) 148
AfiI CCNNNNNNNGG 1 cut(s) 210
AflIII ACRYGT 1 cut(s) 269
AgeI ACCGGT 1 cut(s) 210
AgsI TTSAA 2 cut(s) 155, 251
AjnI CCWGG 1 cut(s) 72
AluBI AGCT 2 cut(s) 133, 305
AluI AGCT 2 cut(s) 133, 305
AoxI GGCC 1 cut(s) 87
AsiGI ACCGGT 1 cut(s) 210
AsuHPI GGTGA 2 cut(s) 191, 200
BbrPI CACGTG 1 cut(s) 272
BciT130I CCWGG 1 cut(s) 74
BclI TGATCA 1 cut(s) 232
BfaI CTAG 1 cut(s) 105
Bme1390I CCNGG 1 cut(s) 74
BmrFI CCNGG 1 cut(s) 74
BmsI GCATC 1 cut(s) 148
BpmI CTGGAG 1 cut(s) 95
BpuEI CTTGAG 1 cut(s) 104
BsaAI YACGTR 1 cut(s) 272
BsaWI WCCGGW 1 cut(s) 210
Bsc4I CCNNNNNNNGG 1 cut(s) 210
Bse118I RCCGGY 2 cut(s) 89, 210
BseBI CCWGG 1 cut(s) 74
BseLI CCNNNNNNNGG 1 cut(s) 210
BshFI GGCC 1 cut(s) 89
BshTI ACCGGT 1 cut(s) 210
BsiSI CCGG 2 cut(s) 90, 211
BslI CCNNNNNNNGG 1 cut(s) 210
BsnI GGCC 1 cut(s) 89
Bsp143I GATC 1 cut(s) 232
BspANI GGCC 1 cut(s) 89
BsrFI RCCGGY 2 cut(s) 89, 210
BssAI RCCGGY 2 cut(s) 89, 210
BssMI GATC 1 cut(s) 232
Bst2UI CCWGG 1 cut(s) 74
Bst4CI ACNGT 1 cut(s) 179
BstBAI YACGTR 1 cut(s) 272
BstKTI GATC 1 cut(s) 235
BstMBI GATC 1 cut(s) 232
BstMWI GCNNNNNNNGC 1 cut(s) 95
BstNI CCWGG 1 cut(s) 74
BstSCI CCNGG 1 cut(s) 72
BsuRI GGCC 1 cut(s) 89
Cfr10I RCCGGY 2 cut(s) 89, 210
Csp6I GTAC 1 cut(s) 147
CspAI ACCGGT 1 cut(s) 210
CviJI RGCY 4 cut(s) 82, 89, 133, 305
CviKI_1 RGCY 4 cut(s) 82, 89, 133, 305
CviQI GTAC 1 cut(s) 147
DpnI GATC 1 cut(s) 234
DpnII GATC 1 cut(s) 232
DraIII CACNNNGTG 1 cut(s) 179
Eco72I CACGTG 1 cut(s) 272
EcoRII CCWGG 1 cut(s) 72
FaiI YATR 7 cut(s) 168, 201, 216, 240, 282, 297, 299
FbaI TGATCA 1 cut(s) 232
FspBI CTAG 1 cut(s) 105
GsuI CTGGAG 1 cut(s) 95
HaeIII GGCC 1 cut(s) 89
HapII CCGG 2 cut(s) 90, 211
HinfI GANTC 1 cut(s) 244
HpaII CCGG 2 cut(s) 90, 211
HphI GGTGA 2 cut(s) 191, 200
Hpy166II GTNNAC 2 cut(s) 70, 149
Hpy188I TCNGA 1 cut(s) 232
Hpy188III TCNNGA 1 cut(s) 248
Hpy8I GTNNAC 2 cut(s) 70, 149
HpyCH4III ACNGT 1 cut(s) 179
HpyCH4IV ACGT 1 cut(s) 271
HpyF10VI GCNNNNNNNGC 1 cut(s) 95
HpySE526I ACGT 1 cut(s) 271
Ksp22I TGATCA 1 cut(s) 232
Kzo9I GATC 1 cut(s) 232
LmnI GCTCC 1 cut(s) 302
LpnPI CCDG 6 cut(s) 12, 59, 86, 103, 175, 224
LweI GCATC 1 cut(s) 148
MaeI CTAG 1 cut(s) 105
MaeII ACGT 1 cut(s) 271
MalI GATC 1 cut(s) 234
MboI GATC 1 cut(s) 232
MboII GAAGA 1 cut(s) 167
MnlI CCTC 2 cut(s) 72, 79
MseI TTAA 2 cut(s) 6, 313
MslI CAYNNNNRTG 1 cut(s) 213
MspI CCGG 2 cut(s) 90, 211
MspR9I CCNGG 1 cut(s) 74
MvaI CCWGG 1 cut(s) 74
MwoI GCNNNNNNNGC 1 cut(s) 95
NdeII GATC 1 cut(s) 232
PfeI GAWTC 1 cut(s) 244
PinAI ACCGGT 1 cut(s) 210
PmaCI CACGTG 1 cut(s) 272
PmlI CACGTG 1 cut(s) 272
Ppu21I YACGTR 1 cut(s) 272
Psp6I CCWGG 1 cut(s) 72
PspCI CACGTG 1 cut(s) 272
PspGI CCWGG 1 cut(s) 72
RsaI GTAC 1 cut(s) 148
RsaNI GTAC 1 cut(s) 147
RseI CAYNNNNRTG 1 cut(s) 213
SaqAI TTAA 2 cut(s) 6, 313
Sau3AI GATC 1 cut(s) 232
ScrFI CCNGG 1 cut(s) 74
SetI ASST 6 cut(s) 75, 135, 266, 274, 307, 311
SfaNI GCATC 1 cut(s) 148
SmiMI CAYNNNNRTG 1 cut(s) 213
SmlI CTYRAG 1 cut(s) 83
SmoI CTYRAG 1 cut(s) 83
SspI AATATT 1 cut(s) 254
SspMI CTAG 1 cut(s) 105
StyD4I CCNGG 1 cut(s) 72
TaaI ACNGT 1 cut(s) 179
TaiI ACGT 1 cut(s) 274
TatI WGTACW 1 cut(s) 146
TfiI GAWTC 1 cut(s) 244
Tru1I TTAA 2 cut(s) 6, 313
Tru9I TTAA 2 cut(s) 6, 313
XspI CTAG 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.