Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004156

Physical Location & Seq

Genomic Coordinates Forward (+)

78326872 .. 78333769

Gene Structure 6898 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00140050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGGGTTGGCTGACTAAAATTCTTAAAGGTTCTAGTCATAAAGGGCACTATCATGGTAAATATGGACATGAAAGAACATGGGATGAGCCTCGAAATTCAGTGGAAGAAGACATCGATTGTGCTATTGCATTGTCCCTTTCGGAACTAGATCAGAAAGGAAAAAGAGTAATTGAGGATGAATCTCAATCAGAGGATGAAGAACAACCTGCTCAATTTGAATCTGATGATGATGAATCACCTGCCAAAGTTGAATCAGAGGATGATGAGCCACCTGCTAAAGTTGAATCAGACCATGACGAACCACCTGCCAAAATTTCATATGAGGAAGATGATCAAAGTGCTAAACTTCAATTGGAGGAAGATGAACAGCTTGCAATGGCTATTCAGGAAAGTTTGAACGTGGATTCTCCTCCTCGACATGACACTGGCAGTATTTTTCGATCATTTCCATTCGGTAACAGGATATGTGCTGGCTGTAAACGGGGGATTGGCCATGGCCGATACTTGAGTTGTGTTGGTGCTGTTTGGCATCCAGATTGTTTTTGTTGCCATGCTTGCAGTCTTCCAATTGCTGATTATGAGTTTTCTATGTCTGGGAATCACCCTTACCACAAATCCTGCTACAAGGAGAAGCATCATCCAAGATGTGATGTTTGCAAGAGTTTTATCCCAACAAACTCAGCTGGTCTTATCGAGTATAGGGCACATCCTTTCTGGCTACAGAAGTACTGCCCCTCTCATGAGCATGATAGGACTCCTCGGTGTTGTAGCTGTGAAAGAATGGAGCCAAGGGACACAAAATATCTGTTACTTGATGATGGTCGAAAGCTATGTCTGGAGTGTCTAGACTCAGCAATTATGGATACTCACGAATGCCAACCCCTTTACCTTGAAATACAAGAATTTTACGAAGGTTTAAATATGAAAGTGGAACAGCAAGTTCCAATGCTCTTGGTGGAGAGACAAGCACTAAACGAGGCCATGGAGGGAGAAAAGAACGGTCATCATCACTTGCCTGAGACTAGAGGACTCTGCTTATCAGAAGAACAGACTGTTACCACTATTTTAAGGAGGCCGAAGATTGGAGCGGGCTACCGGATGATAGACATGATAACTGAGCCTTATAGACTGGTTCGTCGCTGCGAAGTGACAGCAATCCTTGTATTGTATGGCCTTCCTAGGTTATTGACAGGGTCTATTCTTGCTCATGAGATGATGCATGCATGGCTGCGGCTCAAAGGTTATCCAAATTTGAGCCCAGAGGTTGAAGAAGGTATCTGCCAAGTGCTGGCACATATGTGGCTGGATGCAGAGACGTATTCTGCGCCTGGTAGTGATGTTGGAACATCATCGTCGTCTTCCTCTTCTAGTTCGGGATCATCTAAGAAAGGTAAACGGTCCGACTTTGAGAAGAAACTTGGTGACTTTTTTAAACACCAAATCGAGTCAGATTCATCCACAGCTTATGGAGAAGGATTCAGACAAGGTAACCAAGCAGTGCTCAAGTATGGCCTAAGGAGGACCCTTGACCATATTCGAATCACAGGAAGCTTCCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0032182 GO:0043130 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DA1-like LIM

Protein Analysis

519

Amino Acids

58.78

Weight (kDa)

5.38

Isoelectric Point (pI)

57.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LIM	PF00412	156 - 211	8.8e-09	LIM domain
DA1-like	PF12315	305 - 514	3.8e-104	Protein DA1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004156)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36860 AT4G36860 AT4G36860
fragaria_vesca	FvH4_1g14251 FvH4_1g14310 FvH4_1g14310 FvH4_1g14310 FvH4_1g14310 FvH4_1g14310
malus_domestica	MD02G1156700.v1.1 MD10G1020400.v1.1 MD15G1271000.v1.1
prunus_persica	Prupe.7G147100_v2.0.a1 Prupe.7G147100_v2.0.a1 Prupe.7G147100_v2.0.a1 Prupe.7G147100_v2.0.a1 Prupe.7G147100_v2.0.a1 Prupe.7G147100_v2.0.a1
pyrus_communis	pycom02g12360 pycom10g01270 pycom15g23490
rosa_chinensis	RchiOBHm_Chr2g0102971
rosa_multiflora	Rmu_sc0000388.1_g000036
rosa_roxburghii	Rroxscaffold_2G00140050
rosa_rugosa	Rorug02G0110800 Rorug02G0110900 Rorug02G0111000 Rorug02G0111000
rosa_samantha	Rh2AG159200 Rh2BG165700 Rh2CG165700 Rh2DG164500
rosa_wichuraiana	Rw2G012440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	247, 280, 313
AasI	GACNNNNNNGTC	1 cut(s)	1134
Acc36I	ACCTGC	4 cut(s)	214, 247, 280, 313
AccB7I	CCANNNNNTGG	1 cut(s)	1288
AccBSI	CCGCTC	1 cut(s)	1088
AciI	CCGC	2 cut(s)	1088, 1231
AclWI	GGATC	1 cut(s)	1384
AcoI	YGGCCR	2 cut(s)	490, 496
AcsI	RAATTY	5 cut(s)	18, 94, 312, 902, 1249
AfaI	GTAC	1 cut(s)	728
AfiI	CCNNNNNNNGG	2 cut(s)	1082, 1288
AgsI	TTSAA	7 cut(s)	218, 251, 284, 350, 397, 893, 1268
AjnI	CCWGG	1 cut(s)	1327
AleI	CACNNNNGTG	1 cut(s)	1297
AluBI	AGCT	6 cut(s)	370, 683, 771, 829, 1463, 1551
AluI	AGCT	6 cut(s)	370, 683, 771, 829, 1463, 1551
Alw21I	GWGCWC	1 cut(s)	1503
Alw26I	GTCTC	3 cut(s)	955, 1013, 1307
AlwI	GGATC	1 cut(s)	1384
AoxI	GGCC	6 cut(s)	490, 496, 978, 1073, 1171, 1510
ApeKI	GCWGC	2 cut(s)	1140, 1228
ApoI	RAATTY	5 cut(s)	18, 94, 312, 902, 1249
ArsI	GACNNNNNNTTYG	2 cut(s)	817, 849
AspA2I	CCTAGG	1 cut(s)	1178
AspLEI	GCGC	1 cut(s)	1327
AspS9I	GGNCC	2 cut(s)	1398, 1521
AsuHPI	GGTGA	3 cut(s)	228, 593, 1433
AsuII	TTCGAA	1 cut(s)	1537
AvaII	GGWCC	2 cut(s)	1398, 1521
AvrII	CCTAGG	1 cut(s)	1178
AxyI	CCTNAGG	1 cut(s)	1514
BaeGI	GKGCMC	2 cut(s)	48, 706
BaeI	ACNNNNGTAYC	2 cut(s)	493, 526
BalI	TGGCCA	1 cut(s)	492
BanII	GRGCYC	1 cut(s)	1259
BbsI	GAAGAC	3 cut(s)	114, 554, 1350
Bbv12I	GWGCWC	1 cut(s)	1503
BbvI	GCAGC	2 cut(s)	1127, 1215
BccI	CCATC	1 cut(s)	812
BcgI	CGANNNNNNTGC	2 cut(s)	287, 321
BciT130I	CCWGG	1 cut(s)	1329
BciVI	GTATCC	1 cut(s)	856
BclI	TGATCA	1 cut(s)	331
BcoDI	GTCTC	3 cut(s)	955, 1013, 1307
BfaI	CTAG	6 cut(s)	33, 146, 845, 1023, 1179, 1368
BfmI	CTRYAG	1 cut(s)	719
BfuAI	ACCTGC	4 cut(s)	214, 247, 280, 313
BfuI	GTATCC	1 cut(s)	856
BisI	GCNGC	3 cut(s)	1141, 1229, 1232
BlnI	CCTAGG	1 cut(s)	1178
BlsI	GCNGC	3 cut(s)	1142, 1230, 1233
BmcAI	AGTACT	1 cut(s)	728
Bme1390I	CCNGG	1 cut(s)	1329
Bme18I	GGWCC	2 cut(s)	1398, 1521
BmgT120I	GGNCC	2 cut(s)	1398, 1521
BmiI	GGNNCC	2 cut(s)	786, 1523
BmrFI	CCNGG	1 cut(s)	1329
BmsI	GCATC	4 cut(s)	538, 643, 1206, 1297
BpiI	GAAGAC	3 cut(s)	114, 554, 1350
BpmI	CTGGAG	1 cut(s)	857
Bpu14I	TTCGAA	1 cut(s)	1537
BpuEI	CTTGAG	2 cut(s)	526, 1487
Bsa29I	ATCGAT	1 cut(s)	114
BsaJI	CCNNGG	5 cut(s)	493, 758, 788, 981, 1178
BsaWI	WCCGGW	1 cut(s)	1095
Bsc4I	CCNNNNNNNGG	2 cut(s)	1082, 1288
Bse1I	ACTGG	2 cut(s)	430, 1134
Bse21I	CCTNAGG	1 cut(s)	1514
Bse3DI	GCAATG	1 cut(s)	381
BseBI	CCWGG	1 cut(s)	1329
BseCI	ATCGAT	1 cut(s)	114
BseDI	CCNNGG	5 cut(s)	493, 758, 788, 981, 1178
BseLI	CCNNNNNNNGG	2 cut(s)	1082, 1288
BseMI	GCAATG	1 cut(s)	381
BseMII	CTCAG	4 cut(s)	693, 864, 1008, 1107
BseNI	ACTGG	2 cut(s)	430, 1134
BseRI	GAGGAG	3 cut(s)	399, 402, 747
BseSI	GKGCMC	2 cut(s)	48, 706
BseXI	GCAGC	2 cut(s)	1127, 1215
BshFI	GGCC	6 cut(s)	492, 498, 980, 1075, 1173, 1512
BshVI	ATCGAT	1 cut(s)	114
BsiHKAI	GWGCWC	1 cut(s)	1503
BsiSI	CCGG	1 cut(s)	1096
BslFI	GGGAC	2 cut(s)	118, 806
BslI	CCNNNNNNNGG	2 cut(s)	1082, 1288
BsmAI	GTCTC	3 cut(s)	955, 1013, 1307
BsmBI	CGTCTC	1 cut(s)	1307
BsmFI	GGGAC	2 cut(s)	118, 806
BsmI	GAATGC	1 cut(s)	878
BsnI	GGCC	6 cut(s)	492, 498, 980, 1075, 1173, 1512
Bsp119I	TTCGAA	1 cut(s)	1537
Bsp1286I	GDGCHC	4 cut(s)	48, 706, 1259, 1503
Bsp143I	GATC	4 cut(s)	148, 331, 440, 1376
Bsp19I	CCATGG	2 cut(s)	493, 981
BspACI	CCGC	2 cut(s)	1088, 1231
BspANI	GGCC	6 cut(s)	492, 498, 980, 1075, 1173, 1512
BspCNI	CTCAG	4 cut(s)	692, 863, 1009, 1108
BspDI	ATCGAT	1 cut(s)	114
BspHI	TCATGA	2 cut(s)	739, 1207
BspLI	GGNNCC	2 cut(s)	786, 1523
BspMI	ACCTGC	4 cut(s)	214, 247, 280, 313
BspPI	GGATC	1 cut(s)	1384
BspT104I	TTCGAA	1 cut(s)	1537
BsrBI	CCGCTC	1 cut(s)	1088
BsrDI	GCAATG	1 cut(s)	381
BsrI	ACTGG	2 cut(s)	430, 1134
BssECI	CCNNGG	5 cut(s)	493, 758, 788, 981, 1178
BssMI	GATC	4 cut(s)	148, 331, 440, 1376
BssT1I	CCWWGG	4 cut(s)	493, 788, 981, 1178
Bst2UI	CCWGG	1 cut(s)	1329
Bst4CI	ACNGT	3 cut(s)	1001, 1054, 1398
Bst6I	CTCTTC	1 cut(s)	1369
BstBI	TTCGAA	1 cut(s)	1537
BstC8I	GCNNGC	6 cut(s)	372, 472, 556, 1090, 1221, 1290
BstDEI	CTNAG	6 cut(s)	679, 850, 1017, 1116, 1383, 1514
BstDSI	CCRYGG	2 cut(s)	493, 981
BstEII	GGTNACC	1 cut(s)	1487
BstHHI	GCGC	1 cut(s)	1327
BstKTI	GATC	4 cut(s)	151, 334, 443, 1379
BstMAI	GTCTC	3 cut(s)	955, 1013, 1307
BstMBI	GATC	4 cut(s)	148, 331, 440, 1376
BstMWI	GCNNNNNNNGC	2 cut(s)	555, 1225
BstNI	CCWGG	1 cut(s)	1329
BstNSI	RCATGY	1 cut(s)	1223
BstPI	GGTNACC	1 cut(s)	1487
BstSCI	CCNGG	1 cut(s)	1327
BstSFI	CTRYAG	1 cut(s)	719
BstSLI	GKGCMC	2 cut(s)	48, 706
BstV1I	GCAGC	2 cut(s)	1127, 1215
BstV2I	GAAGAC	3 cut(s)	114, 554, 1350
Bsu15I	ATCGAT	1 cut(s)	114
Bsu36I	CCTNAGG	1 cut(s)	1514
BsuI	GTATCC	1 cut(s)	856
BsuRI	GGCC	6 cut(s)	492, 498, 980, 1075, 1173, 1512
BsuTUI	ATCGAT	1 cut(s)	114
BtgI	CCRYGG	2 cut(s)	493, 981
BtsI	GCAGTG	1 cut(s)	1503
BtsIMutI	CAGTG	3 cut(s)	105, 423, 1503
BveI	ACCTGC	4 cut(s)	214, 247, 280, 313
Cac8I	GCNNGC	6 cut(s)	372, 472, 556, 1090, 1221, 1290
CciI	TCATGA	2 cut(s)	739, 1207
CfoI	GCGC	1 cut(s)	1327
Cfr13I	GGNCC	2 cut(s)	1398, 1521
ClaI	ATCGAT	1 cut(s)	114
CpoI	CGGWCCG	1 cut(s)	1398
Csp6I	GTAC	1 cut(s)	727
CspI	CGGWCCG	1 cut(s)	1398
CviQI	GTAC	1 cut(s)	727
DdeI	CTNAG	6 cut(s)	679, 850, 1017, 1116, 1383, 1514
DpnI	GATC	4 cut(s)	150, 333, 442, 1378
DpnII	GATC	4 cut(s)	148, 331, 440, 1376
DraI	TTTAAA	2 cut(s)	918, 1432
DrdI	GACNNNNNNGTC	1 cut(s)	1134
DseDI	GACNNNNNNGTC	1 cut(s)	1134
EaeI	YGGCCR	2 cut(s)	490, 496
Eam1104I	CTCTTC	1 cut(s)	1369
EarI	CTCTTC	1 cut(s)	1369
Eco130I	CCWWGG	4 cut(s)	493, 788, 981, 1178
Eco24I	GRGCYC	1 cut(s)	1259
Eco47I	GGWCC	2 cut(s)	1398, 1521
Eco81I	CCTNAGG	1 cut(s)	1514
Eco91I	GGTNACC	1 cut(s)	1487
EcoO109I	RGGNCCY	1 cut(s)	1521
EcoO65I	GGTNACC	1 cut(s)	1487
EcoRII	CCWGG	1 cut(s)	1327
EcoT14I	CCWWGG	4 cut(s)	493, 788, 981, 1178
EcoT22I	ATGCAT	2 cut(s)	1221, 1225
EcoT38I	GRGCYC	1 cut(s)	1259
ErhI	CCWWGG	4 cut(s)	493, 788, 981, 1178
Esp3I	CGTCTC	1 cut(s)	1307
FaqI	GGGAC	2 cut(s)	118, 806
FauI	CCCGC	1 cut(s)	1081
FauNDI	CATATG	2 cut(s)	319, 1296
FbaI	TGATCA	1 cut(s)	331
Fnu4HI	GCNGC	3 cut(s)	1141, 1229, 1232
FriOI	GRGCYC	1 cut(s)	1259
Fsp4HI	GCNGC	3 cut(s)	1141, 1229, 1232
FspBI	CTAG	6 cut(s)	33, 146, 845, 1023, 1179, 1368
GlaI	GCGC	1 cut(s)	1326
GluI	GCNGC	3 cut(s)	1141, 1229, 1232
GsuI	CTGGAG	1 cut(s)	857
HaeIII	GGCC	6 cut(s)	492, 498, 980, 1075, 1173, 1512
HapII	CCGG	1 cut(s)	1096
HhaI	GCGC	1 cut(s)	1327
Hin6I	GCGC	1 cut(s)	1325
HinP1I	GCGC	1 cut(s)	1325
HindIII	AAGCTT	1 cut(s)	1549
HpaII	CCGG	1 cut(s)	1096
HphI	GGTGA	3 cut(s)	228, 593, 1433
Hpy166II	GTNNAC	2 cut(s)	479, 1394
Hpy188III	TCNNGA	8 cut(s)	386, 533, 740, 836, 845, 869, 1208, 1374
Hpy8I	GTNNAC	2 cut(s)	479, 1394
Hpy99I	CGWCG	2 cut(s)	1140, 1357
HpyAV	CCTTC	4 cut(s)	905, 1184, 1265, 1466
HpyCH4III	ACNGT	3 cut(s)	1001, 1054, 1398
HpyCH4IV	ACGT	2 cut(s)	399, 1316
HpyCH4V	TGCA	7 cut(s)	128, 374, 558, 657, 1219, 1223, 1310
HpyF10VI	GCNNNNNNNGC	2 cut(s)	555, 1225
HpyF3I	CTNAG	6 cut(s)	679, 850, 1017, 1116, 1383, 1514
HpySE526I	ACGT	2 cut(s)	399, 1316
HspAI	GCGC	1 cut(s)	1325
Ksp22I	TGATCA	1 cut(s)	331
Kzo9I	GATC	4 cut(s)	148, 331, 440, 1376
LmnI	GCTCC	2 cut(s)	784, 1085
Lsp1109I	GCAGC	2 cut(s)	1127, 1215
LweI	GCATC	4 cut(s)	538, 643, 1206, 1297
MaeI	CTAG	6 cut(s)	33, 146, 845, 1023, 1179, 1368
MaeII	ACGT	2 cut(s)	399, 1316
MaeIII	GTNAC	6 cut(s)	455, 807, 1054, 1147, 1421, 1487
MalI	GATC	4 cut(s)	150, 333, 442, 1378
MbiI	CCGCTC	1 cut(s)	1088
MboI	GATC	4 cut(s)	148, 331, 440, 1376
MfeI	CAATTG	2 cut(s)	350, 567
MhlI	GDGCHC	4 cut(s)	48, 706, 1259, 1503
MlsI	TGGCCA	1 cut(s)	492
MluNI	TGGCCA	1 cut(s)	492
MlyI	GAGTC	4 cut(s)	748, 842, 1023, 1454
MmeI	TCCRAC	2 cut(s)	1321, 1425
Mox20I	TGGCCA	1 cut(s)	492
Mph1103I	ATGCAT	2 cut(s)	1221, 1225
MscI	TGGCCA	1 cut(s)	492
MseI	TTAA	4 cut(s)	24, 917, 1067, 1431
MslI	CAYNNNNRTG	3 cut(s)	51, 744, 1297
Msp20I	TGGCCA	1 cut(s)	492
MspA1I	CMGCKG	1 cut(s)	683
MspI	CCGG	1 cut(s)	1096
MspR9I	CCNGG	1 cut(s)	1329
MunI	CAATTG	2 cut(s)	350, 567
Mva1269I	GAATGC	1 cut(s)	878
MvaI	CCWGG	1 cut(s)	1329
MwoI	GCNNNNNNNGC	2 cut(s)	555, 1225
NcoI	CCATGG	2 cut(s)	493, 981
NdeI	CATATG	2 cut(s)	319, 1296
NdeII	GATC	4 cut(s)	148, 331, 440, 1376
NlaIV	GGNNCC	2 cut(s)	786, 1523
NmuCI	GTSAC	2 cut(s)	1147, 1421
NsiI	ATGCAT	2 cut(s)	1221, 1225
NspI	RCATGY	1 cut(s)	1223
NspV	TTCGAA	1 cut(s)	1537
OliI	CACNNNNGTG	1 cut(s)	1297
PaeI	GCATGC	1 cut(s)	1223
PagI	TCATGA	2 cut(s)	739, 1207
PaqCI	CACCTGC	3 cut(s)	247, 280, 313
PctI	GAATGC	1 cut(s)	878
PflFI	GACNNNGTC	1 cut(s)	1192
PflMI	CCANNNNNTGG	1 cut(s)	1288
PkrI	GCNGC	3 cut(s)	1142, 1230, 1233
PleI	GAGTC	4 cut(s)	748, 842, 1023, 1453
PpsI	GAGTC	4 cut(s)	748, 842, 1023, 1453
PpuMI	RGGWCCY	1 cut(s)	1521
Psp5II	RGGWCCY	1 cut(s)	1521
Psp6I	CCWGG	1 cut(s)	1327
PspEI	GGTNACC	1 cut(s)	1487
PspGI	CCWGG	1 cut(s)	1327
PspN4I	GGNNCC	2 cut(s)	786, 1523
PspPI	GGNCC	2 cut(s)	1398, 1521
PspPPI	RGGWCCY	1 cut(s)	1521
PsyI	GACNNNGTC	1 cut(s)	1192
PvuII	CAGCTG	1 cut(s)	683
RsaI	GTAC	1 cut(s)	728
RsaNI	GTAC	1 cut(s)	727
RseI	CAYNNNNRTG	3 cut(s)	51, 744, 1297
Rsr2I	CGGWCCG	1 cut(s)	1398
RsrII	CGGWCCG	1 cut(s)	1398
SaqAI	TTAA	4 cut(s)	24, 917, 1067, 1431
SatI	GCNGC	3 cut(s)	1141, 1229, 1232
Sau3AI	GATC	4 cut(s)	148, 331, 440, 1376
Sau96I	GGNCC	2 cut(s)	1398, 1521
ScaI	AGTACT	1 cut(s)	728
SchI	GAGTC	4 cut(s)	748, 842, 1023, 1454
ScrFI	CCNGG	1 cut(s)	1329
SduI	GDGCHC	4 cut(s)	48, 706, 1259, 1503
SfaNI	GCATC	4 cut(s)	538, 643, 1206, 1297
SfcI	CTRYAG	1 cut(s)	719
SfuI	TTCGAA	1 cut(s)	1537
SinI	GGWCC	2 cut(s)	1398, 1521
SmiMI	CAYNNNNRTG	3 cut(s)	51, 744, 1297
SmlI	CTYRAG	2 cut(s)	505, 1502
SmoI	CTYRAG	2 cut(s)	505, 1502
SphI	GCATGC	1 cut(s)	1223
SsiI	CCGC	2 cut(s)	1088, 1231
SspMI	CTAG	6 cut(s)	33, 146, 845, 1023, 1179, 1368
StyD4I	CCNGG	1 cut(s)	1327
StyI	CCWWGG	4 cut(s)	493, 788, 981, 1178
TaaI	ACNGT	3 cut(s)	1001, 1054, 1398
TaiI	ACGT	2 cut(s)	402, 1319
TaqI	TCGA	8 cut(s)	91, 114, 415, 439, 693, 823, 1443, 1537
TatI	WGTACW	1 cut(s)	726
TauI	GCSGC	1 cut(s)	1234
Tru1I	TTAA	4 cut(s)	24, 917, 1067, 1431
Tru9I	TTAA	4 cut(s)	24, 917, 1067, 1431
TscAI	CASTG	3 cut(s)	105, 430, 1503
TseFI	GTSAC	2 cut(s)	1147, 1421
TseI	GCWGC	2 cut(s)	1140, 1228
Tsp45I	GTSAC	2 cut(s)	1147, 1421
TspDTI	ATGAA	8 cut(s)	84, 192, 210, 246, 306, 378, 938, 1443
TspRI	CASTG	3 cut(s)	105, 430, 1503
Tth111I	GACNNNGTC	1 cut(s)	1192
Van91I	CCANNNNNTGG	1 cut(s)	1288
VpaK11BI	GGWCC	2 cut(s)	1398, 1521
XapI	RAATTY	5 cut(s)	18, 94, 312, 902, 1249
XbaI	TCTAGA	1 cut(s)	844
XceI	RCATGY	1 cut(s)	1223
XmaJI	CCTAGG	1 cut(s)	1178
XspI	CTAG	6 cut(s)	33, 146, 845, 1023, 1179, 1368
ZrmI	AGTACT	1 cut(s)	728
Zsp2I	ATGCAT	2 cut(s)	1221, 1225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.