Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004156

Physical Location & Seq

Genomic Coordinates Forward (+)

9493268 .. 9500695

Gene Structure 7428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0110800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGTACGGATCGAGAGGGGCAATGTTGGGAGGCGGGGGGTTATCGGACGTGTACGAGGTCGGCTCAAAGAGACCAAGAATGATGGAATCAAATCCCTACTTCGCAGTTGGCAGCAGTGCAAGGGGATTTCAACCTTTCGGTGGCTATGGTGGTGGCTTCCAACTTCCTGCTTTTCCCGTGGTCCGTCTTAGGGGGCTTCCTTTCAACTGCTCGGACATTGACATCTTCAAGTTCTTTGCTGGACTGGATATTGTGGATGTGTTGCTGGTCAACAAGGGTGGACGCTTTTCAGGAGAGGCCTTTGTTGTCTTTGCTGGACCTTTGCAGGTTGAGTTAGCTCTTCAAAGAGACCGGCAGAACATGGGGCGTAGGTATGTTGAAGTTTTCACATGCAAGAGGCAGGATTACTACAATGCTGTTGCAGCAGAGGTCAGCTATGAAGGGATTTATGATAATGATTTTCAAGGAAGTCCTCCTCCACCTAAATCGTCAAAGCGGTTCAATGATAAGGAGAAAATGGAATACACTGAGATATTGAAGTTGCGTGGTCTACCTTTCTCTGTAAAAAGATCTCAAATTATTGATTTTTTTGGAGATTTCAAGGTCATTGAAGATAGAGTACATATTGCTTGCCGCCCAGATGGAAAAGCTACCGGAGAGGCATACGTGGAGTTTGTTTCTGCAGAAGAGGCTAAAAAGGCGATGTCCAAGGACAAGATGATGATTGGTTCCAGTCCTGCAAGTTTCGCTGCAATGAGCGAATCCCCATTTGATGATCCGATCGAACCGACTTCCTTCGACCTTATCGTCATCGGAACCGGCCTCCCGGAGTCAGTAATCGCTGCAGCAGCCTCCACTTCCGGCAAAACTGTTCTCCAGCTTGACCCTAACGACTCCTACGGCAGCCACTTTGCCTCTCACACACTTGATGACCTCACTTCCTTCCTGAATTCACATGCTGCTCCACCTCCCTCCACCGCCGGCGTTACAACTAGTAGTGGTAGTGATTACACTACATTGGATCTCAACCCCCGTTCGCTGTACTCCCACATTGAGACTGCCAACTATGCCCCGGAAATCCTTGCAGAGCATTCGAGGAGATTCCTTATTGACATTGGCGGGCCGAGGGTGCTGTTCTGTGCTGACAAGGCCATTGAGCTTATATTGAAGTCGGGTGTGGGGTCGTATTTGAATTTCAAGGCTGTTGATGGGAACTTGATTTGGGATGAGAGTAGCCGCGGGTTGTGTAACGTGCCGGACTCAAGAGCAGCGATATTTAAAGACAAGGGCATGAGTCTTAAAGAGAAGAATCAGTTGATGAGGTTCTTCAAGCTTGTTCAGCGGCACTTGGCGGCAGCCTCTGATGGTGAAGAAGATAATGAGAGTTCAAAGATTTCTGAGGAGGATTTGGAGACCCCATTTGTTGACTTCTTAACAACACGGCTGCCGCACAAGATTAAATCGATTATCCTTTATTCCATTGCAATGGTTGATTATGATCAAGACAACTCAAAAGTTTGTAAAAGTATACTCAAGACAAGAGATGGGATATCGCGTTTAGCTCTCTATCAAAAATCAGTTGGCAGGTTTCCAGATGCCAATGGAGCTTTTCTTTACCCTATGTATGGTCATGGGGAGTTATCACAAGCCTTTTGCCGCCGTGCTGCTGTTAAAGGTTGTCTTCAAGTTCTGCGAAGGCCAGTGATTTCTCTGCTTATGGACAAGGATAGTGGGCAATATAAGGGTGTTAGATTAGTTTCAGGTCAGGATTTGTTGAGTCATCGGCTGGTTATGGATCCAACCTTCACGGTCCCACTGCCACCAGCTTCATCTCCACCAGACCTTCCAAAAGAAAGTCTGAAAGGTGATAAAAGAAAGGTGGCCAGGGGAATATGTATTACAACAAGATCCTTGAAGCCAGATATATCAAACTTATTGCTTGTGTATCCTCCTAGATCTTTGTTTTCTGAGCAGGACACTTCAGTCCGAGCTATCCAGATTCGTGGTGGAACAGATGGTGGCGGTTTGGCTGTTTGTCCATCGAGCATGTTTGTGTTGTACTTTTCTGCTCTATGTGATGATGCTGAACAAGGGAAAAGGTTGCTACATGCGGCCATGAATGCTCTTCTCACACTTCCTGTTTCTGGAAATCTTGAAAGTGGTTCCACAGTTCAAAGTGAAGACGCAGAACTAAAACCCACCTTACTTTGGAGCATGCTATACATTCAGGAGATCACAACGGGTCAATATGAACATCTCATCTCCACTCCCATGCCAGATGGAAATCTCAACTATGATGATCTGCTGGATGAAACTGTTCTGCTCTTCCAGAAGATGTATCCAGACGAGGCATTCTTTCCAGAGACACCTTCCTTGCCCGAGAATCCAGAAGAGGATATTGAAGGGCTTAGTCTTGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0032182 GO:0043130 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DA1-like LIM

Protein Analysis

807

Amino Acids

88.71

Weight (kDa)

5.26

Isoelectric Point (pI)

49.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	181 - 244	1.3e-06	RNA recognition motif
GDI	PF00996	265 - 328	6.8e-08	GDP dissociation inhibitor
GDI	PF00996	342 - 603	4.1e-26	GDP dissociation inhibitor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004156)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36860 AT4G36860 AT4G36860
fragaria_vesca	FvH4_1g14251 FvH4_1g14310 FvH4_1g14310 FvH4_1g14310 FvH4_1g14310 FvH4_1g14310
malus_domestica	MD02G1156700.v1.1 MD10G1020400.v1.1 MD15G1271000.v1.1
prunus_persica	Prupe.7G147100_v2.0.a1 Prupe.7G147100_v2.0.a1 Prupe.7G147100_v2.0.a1 Prupe.7G147100_v2.0.a1 Prupe.7G147100_v2.0.a1 Prupe.7G147100_v2.0.a1
pyrus_communis	pycom02g12360 pycom10g01270 pycom15g23490
rosa_chinensis	RchiOBHm_Chr2g0102971
rosa_multiflora	Rmu_sc0000388.1_g000036
rosa_roxburghii	Rroxscaffold_2G00140050
rosa_rugosa	Rorug02G0110800 Rorug02G0110900 Rorug02G0111000 Rorug02G0111000
rosa_samantha	Rh2AG159200 Rh2BG165700 Rh2CG165700 Rh2DG164500
rosa_wichuraiana	Rw2G012440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	806, 1982
Acc36I	ACCTGC	2 cut(s)	316, 1575
AccI	GTMKAC	2 cut(s)	550, 1528
AccII	CGCG	2 cut(s)	1239, 1555
AclWI	GGATC	6 cut(s)	16, 770, 1029, 1790, 1803, 1902
AcoI	YGGCCR	2 cut(s)	1881, 2112
AcsI	RAATTY	2 cut(s)	949, 1192
AcuI	CTGAAG	1 cut(s)	1965
AfaI	GTAC	5 cut(s)	5, 53, 621, 1043, 2060
AfiI	CCNNNNNNNGG	5 cut(s)	140, 190, 1625, 2144, 2208
AflIII	ACRYGT	1 cut(s)	48
AhlI	ACTAGT	1 cut(s)	992
AjiI	CACGTC	1 cut(s)	49
AjnI	CCWGG	1 cut(s)	1883
Alw26I	GTCTC	5 cut(s)	64, 342, 1049, 1406, 2357
AlwI	GGATC	6 cut(s)	16, 770, 1029, 1790, 1803, 1902
AlwNI	CAGNNNCTG	1 cut(s)	1361
Ama87I	CYCGRG	1 cut(s)	2378
AoxI	GGCC	7 cut(s)	297, 820, 1121, 1149, 1697, 1881, 2112
ApoI	RAATTY	2 cut(s)	949, 1192
Asp700I	GAANNNNTTC	1 cut(s)	2316
AspS9I	GGNCC	4 cut(s)	181, 317, 1121, 1810
AsuC2I	CCSGG	2 cut(s)	827, 1073
AsuHPI	GGTGA	2 cut(s)	1379, 1877
AvaI	CYCGRG	1 cut(s)	2378
AvaII	GGWCC	3 cut(s)	181, 317, 1810
BalI	TGGCCA	1 cut(s)	1883
BamHI	GGATCC	1 cut(s)	1795
BarI	GAAGNNNNNNTAC	2 cut(s)	603, 635
BbsI	GAAGAC	2 cut(s)	1673, 2187
BccI	CCATC	8 cut(s)	76, 635, 1202, 1358, 1538, 2009, 2047, 2273
BceAI	ACGGC	3 cut(s)	916, 1457, 1644
BcgI	CGANNNNNNTGC	2 cut(s)	1074, 1108
BciT130I	CCWGG	1 cut(s)	1885
BciVI	GTATCC	2 cut(s)	1956, 2349
BclI	TGATCA	1 cut(s)	1498
BcnI	CCSGG	2 cut(s)	827, 1073
BcoDI	GTCTC	5 cut(s)	64, 342, 1049, 1406, 2357
BcuI	ACTAGT	1 cut(s)	992
BfaI	CTAG	2 cut(s)	993, 1953
BfmI	CTRYAG	2 cut(s)	681, 843
BfuAI	ACCTGC	2 cut(s)	316, 1575
BfuI	GTATCC	2 cut(s)	1956, 2349
BglII	AGATCT	2 cut(s)	569, 1955
Bme1390I	CCNGG	3 cut(s)	827, 1073, 1885
Bme18I	GGWCC	3 cut(s)	181, 317, 1810
BmeT110I	CYCGRG	1 cut(s)	2378
BmgBI	CACGTC	1 cut(s)	49
BmgT120I	GGNCC	4 cut(s)	181, 317, 1121, 1810
BmiI	GGNNCC	5 cut(s)	730, 817, 1797, 1812, 2164
BmrFI	CCNGG	3 cut(s)	827, 1073, 1885
BmsI	GCATC	2 cut(s)	1585, 2071
BpiI	GAAGAC	2 cut(s)	1673, 2187
BplI	GAGNNNNNCTC	2 cut(s)	47, 79
BpmI	CTGGAG	1 cut(s)	860
BpuEI	CTTGAG	2 cut(s)	1246, 1517
BpuMI	CCSGG	2 cut(s)	827, 1073
Bsa29I	ATCGAT	1 cut(s)	1463
BsaAI	YACGTR	1 cut(s)	667
BsaBI	GATNNNNATC	2 cut(s)	1497, 2283
BsaI	GGTCTC	3 cut(s)	64, 342, 1406
BsaJI	CCNNGG	6 cut(s)	177, 708, 1071, 1124, 1237, 1884
BsaWI	WCCGGW	1 cut(s)	653
Bsc4I	CCNNNNNNNGG	5 cut(s)	140, 190, 1625, 2144, 2208
Bse118I	RCCGGY	3 cut(s)	351, 818, 980
Bse1I	ACTGG	3 cut(s)	249, 732, 1700
Bse3DI	GCAATG	4 cut(s)	27, 759, 1479, 1491
Bse8I	GATNNNNATC	2 cut(s)	1497, 2283
BseBI	CCWGG	1 cut(s)	1885
BseCI	ATCGAT	1 cut(s)	1463
BseDI	CCNNGG	6 cut(s)	177, 708, 1071, 1124, 1237, 1884
BseGI	GGATG	3 cut(s)	262, 1231, 2314
BseJI	GATNNNNATC	2 cut(s)	1497, 2283
BseLI	CCNNNNNNNGG	5 cut(s)	140, 190, 1625, 2144, 2208
BseMI	GCAATG	4 cut(s)	27, 759, 1479, 1491
BseMII	CTCAG	3 cut(s)	519, 1389, 1959
BseNI	ACTGG	3 cut(s)	249, 732, 1700
BseRI	GAGGAG	3 cut(s)	465, 1111, 1415
Bsh1236I	CGCG	2 cut(s)	1239, 1555
Bsh1285I	CGRYCG	1 cut(s)	783
BshFI	GGCC	7 cut(s)	299, 822, 1123, 1151, 1699, 1883, 2114
BshVI	ATCGAT	1 cut(s)	1463
BsiEI	CGRYCG	1 cut(s)	783
BsiHKCI	CYCGRG	1 cut(s)	2378
BsiSI	CCGG	8 cut(s)	352, 654, 819, 827, 861, 981, 1073, 1256
BslFI	GGGAC	1 cut(s)	1796
BslI	CCNNNNNNNGG	5 cut(s)	140, 190, 1625, 2144, 2208
BsmAI	GTCTC	5 cut(s)	64, 342, 1049, 1406, 2357
BsmFI	GGGAC	1 cut(s)	1796
BsmI	GAATGC	3 cut(s)	1090, 2125, 2351
BsnI	GGCC	7 cut(s)	299, 822, 1123, 1151, 1699, 1883, 2114
Bso31I	GGTCTC	3 cut(s)	64, 342, 1406
BsoBI	CYCGRG	1 cut(s)	2378
BspANI	GGCC	7 cut(s)	299, 822, 1123, 1151, 1699, 1883, 2114
BspCNI	CTCAG	3 cut(s)	520, 1390, 1960
BspDI	ATCGAT	1 cut(s)	1463
BspFNI	CGCG	2 cut(s)	1239, 1555
BspLI	GGNNCC	5 cut(s)	730, 817, 1797, 1812, 2164
BspMAI	CTGCAG	2 cut(s)	685, 847
BspMI	ACCTGC	2 cut(s)	316, 1575
BspPI	GGATC	6 cut(s)	16, 770, 1029, 1790, 1803, 1902
BspQI	GCTCTTC	3 cut(s)	345, 2130, 2330
BspTNI	GGTCTC	3 cut(s)	64, 342, 1406
BsrDI	GCAATG	4 cut(s)	27, 759, 1479, 1491
BsrFI	RCCGGY	3 cut(s)	351, 818, 980
BsrI	ACTGG	3 cut(s)	249, 732, 1700
BssAI	RCCGGY	3 cut(s)	351, 818, 980
BssECI	CCNNGG	6 cut(s)	177, 708, 1071, 1124, 1237, 1884
BssNAI	GTATAC	1 cut(s)	1529
BssT1I	CCWWGG	1 cut(s)	708
Bst1107I	GTATAC	1 cut(s)	1529
Bst2UI	CCWGG	1 cut(s)	1885
Bst4CI	ACNGT	4 cut(s)	871, 1810, 2170, 2317
Bst6I	CTCTTC	5 cut(s)	345, 681, 2130, 2330, 2385
BstBAI	YACGTR	1 cut(s)	667
BstC8I	GCNNGC	4 cut(s)	631, 982, 1121, 2216
BstDEI	CTNAG	5 cut(s)	188, 528, 1398, 1968, 2408
BstDSI	CCRYGG	2 cut(s)	177, 1237
BstF5I	GGATG	3 cut(s)	262, 1231, 2314
BstFNI	CGCG	2 cut(s)	1239, 1555
BstMAI	GTCTC	5 cut(s)	64, 342, 1049, 1406, 2357
BstMCI	CGRYCG	1 cut(s)	783
BstNI	CCWGG	1 cut(s)	1885
BstNSI	RCATGY	5 cut(s)	393, 959, 2050, 2111, 2218
BstSCI	CCNGG	3 cut(s)	825, 1071, 1883
BstSFI	CTRYAG	2 cut(s)	681, 843
BstUI	CGCG	2 cut(s)	1239, 1555
BstV2I	GAAGAC	2 cut(s)	1673, 2187
BstX2I	RGATCY	5 cut(s)	569, 1021, 1795, 1907, 1955
BstXI	CCANNNNNNTGG	2 cut(s)	1486, 2003
BstYI	RGATCY	5 cut(s)	569, 1021, 1795, 1907, 1955
BstZ17I	GTATAC	1 cut(s)	1529
Bsu15I	ATCGAT	1 cut(s)	1463
BsuI	GTATCC	2 cut(s)	1956, 2349
BsuRI	GGCC	7 cut(s)	299, 822, 1123, 1151, 1699, 1883, 2114
BsuTUI	ATCGAT	1 cut(s)	1463
BtgI	CCRYGG	2 cut(s)	177, 1237
BtgZI	GCGATG	1 cut(s)	716
BtrI	CACGTC	1 cut(s)	49
BtsCI	GGATG	3 cut(s)	262, 1231, 2314
BtsI	GCAGTG	2 cut(s)	121, 1814
BtsIMutI	CAGTG	4 cut(s)	121, 525, 1707, 1814
BveI	ACCTGC	2 cut(s)	316, 1575
Cac8I	GCNNGC	4 cut(s)	631, 982, 1121, 2216
CaiI	CAGNNNCTG	1 cut(s)	1361
Cfr10I	RCCGGY	3 cut(s)	351, 818, 980
Cfr13I	GGNCC	4 cut(s)	181, 317, 1121, 1810
Cfr42I	CCGCGG	1 cut(s)	1240
ClaI	ATCGAT	1 cut(s)	1463
CseI	GACGC	2 cut(s)	291, 2192
Csp6I	GTAC	5 cut(s)	4, 52, 620, 1042, 2059
CspCI	CAANNNNNGTGG	4 cut(s)	259, 294, 1711, 1746
CviQI	GTAC	5 cut(s)	4, 52, 620, 1042, 2059
DdeI	CTNAG	5 cut(s)	188, 528, 1398, 1968, 2408
DraI	TTTAAA	1 cut(s)	1279
DrdI	GACNNNNNNGTC	2 cut(s)	806, 1982
DseDI	GACNNNNNNGTC	2 cut(s)	806, 1982
EaeI	YGGCCR	2 cut(s)	1881, 2112
Eam1104I	CTCTTC	5 cut(s)	345, 681, 2130, 2330, 2385
EarI	CTCTTC	5 cut(s)	345, 681, 2130, 2330, 2385
Eco130I	CCWWGG	1 cut(s)	708
Eco147I	AGGCCT	1 cut(s)	299
Eco31I	GGTCTC	3 cut(s)	64, 342, 1406
Eco32I	GATATC	1 cut(s)	1551
Eco47I	GGWCC	3 cut(s)	181, 317, 1810
Eco57I	CTGAAG	1 cut(s)	1965
Eco88I	CYCGRG	1 cut(s)	2378
EcoRI	GAATTC	1 cut(s)	949
EcoRII	CCWGG	1 cut(s)	1883
EcoRV	GATATC	1 cut(s)	1551
EcoT14I	CCWWGG	1 cut(s)	708
ErhI	CCWWGG	1 cut(s)	708
FalI	AAGNNNNNCTT	2 cut(s)	1665, 1697
FaqI	GGGAC	1 cut(s)	1796
FauI	CCCGC	3 cut(s)	26, 1112, 1232
FbaI	TGATCA	1 cut(s)	1498
FblI	GTMKAC	2 cut(s)	550, 1528
FokI	GGATG	3 cut(s)	269, 1238, 2321
FspBI	CTAG	2 cut(s)	993, 1953
GsuI	CTGGAG	1 cut(s)	860
HaeIII	GGCC	7 cut(s)	299, 822, 1123, 1151, 1699, 1883, 2114
HapII	CCGG	8 cut(s)	352, 654, 819, 827, 861, 981, 1073, 1256
HgaI	GACGC	2 cut(s)	291, 2192
HincII	GTYRAC	2 cut(s)	271, 1426
HindII	GTYRAC	2 cut(s)	271, 1426
HindIII	AAGCTT	1 cut(s)	1331
HpaII	CCGG	8 cut(s)	352, 654, 819, 827, 861, 981, 1073, 1256
HphI	GGTGA	2 cut(s)	1379, 1877
Hpy166II	GTNNAC	6 cut(s)	52, 271, 281, 551, 1426, 1529
Hpy188I	TCNGA	9 cut(s)	46, 214, 780, 815, 1363, 1399, 1860, 1969, 1988
Hpy8I	GTNNAC	6 cut(s)	52, 271, 281, 551, 1426, 1529
HpyAV	CCTTC	8 cut(s)	434, 805, 952, 1689, 1813, 1853, 2379, 2396
HpyCH4III	ACNGT	4 cut(s)	871, 1810, 2170, 2317
HpyCH4IV	ACGT	3 cut(s)	48, 666, 1251
HpyF3I	CTNAG	5 cut(s)	188, 528, 1398, 1968, 2408
HpySE526I	ACGT	3 cut(s)	48, 666, 1251
KroI	GCCGGC	1 cut(s)	980
KroNI	GCCGGC	1 cut(s)	982
Ksp22I	TGATCA	1 cut(s)	1498
KspI	CCGCGG	1 cut(s)	1240
LguI	GCTCTTC	3 cut(s)	345, 2130, 2330
LmnI	GCTCC	3 cut(s)	967, 1604, 2211
LweI	GCATC	2 cut(s)	1585, 2071
MaeI	CTAG	2 cut(s)	993, 1953
MaeII	ACGT	3 cut(s)	48, 666, 1251
MaeIII	GTNAC	2 cut(s)	985, 1247
MflI	RGATCY	5 cut(s)	569, 1021, 1795, 1907, 1955
MlsI	TGGCCA	1 cut(s)	1883
MluCI	AATT	3 cut(s)	576, 949, 1192
MluNI	TGGCCA	1 cut(s)	1883
MlyI	GAGTC	5 cut(s)	839, 887, 1253, 1303, 1786
MmeI	TCCRAC	2 cut(s)	184, 1823
Mox20I	TGGCCA	1 cut(s)	1883
MreI	CGCCGGCG	1 cut(s)	980
MroNI	GCCGGC	1 cut(s)	980
MroXI	GAANNNNTTC	1 cut(s)	2316
MscI	TGGCCA	1 cut(s)	1883
MseI	TTAA	5 cut(s)	1278, 1299, 1433, 1458, 1671
MslI	CAYNNNNRTG	3 cut(s)	1484, 2051, 2270
Msp20I	TGGCCA	1 cut(s)	1883
MspA1I	CMGCKG	2 cut(s)	1239, 1342
MspI	CCGG	8 cut(s)	352, 654, 819, 827, 861, 981, 1073, 1256
MspR9I	CCNGG	3 cut(s)	827, 1073, 1885
Mva1269I	GAATGC	3 cut(s)	1090, 2125, 2351
MvaI	CCWGG	1 cut(s)	1885
MvnI	CGCG	2 cut(s)	1239, 1555
NaeI	GCCGGC	1 cut(s)	982
NciI	CCSGG	2 cut(s)	827, 1073
NgoMIV	GCCGGC	1 cut(s)	980
NlaIV	GGNNCC	5 cut(s)	730, 817, 1797, 1812, 2164
NmeAIII	GCCGAG	1 cut(s)	1149
NspI	RCATGY	5 cut(s)	393, 959, 2050, 2111, 2218
PaeI	GCATGC	1 cut(s)	2218
PceI	AGGCCT	1 cut(s)	299
PciSI	GCTCTTC	3 cut(s)	345, 2130, 2330
PcsI	WCGNNNNNNNCGW	1 cut(s)	804
PctI	GAATGC	3 cut(s)	1090, 2125, 2351
PdiI	GCCGGC	1 cut(s)	982
PdmI	GAANNNNTTC	1 cut(s)	2316
PfeI	GAWTC	6 cut(s)	86, 761, 1101, 1309, 1999, 2383
PfoI	TCCNGGA	1 cut(s)	825
Ple19I	CGATCG	1 cut(s)	783
PleI	GAGTC	5 cut(s)	838, 887, 1253, 1302, 1785
PpsI	GAGTC	5 cut(s)	838, 887, 1253, 1302, 1785
Ppu21I	YACGTR	1 cut(s)	667
Psp6I	CCWGG	1 cut(s)	1883
PspGI	CCWGG	1 cut(s)	1883
PspN4I	GGNNCC	5 cut(s)	730, 817, 1797, 1812, 2164
PspPI	GGNCC	4 cut(s)	181, 317, 1121, 1810
PstI	CTGCAG	2 cut(s)	685, 847
PstNI	CAGNNNCTG	1 cut(s)	1361
PsuI	RGATCY	5 cut(s)	569, 1021, 1795, 1907, 1955
PvuI	CGATCG	1 cut(s)	783
RsaI	GTAC	5 cut(s)	5, 53, 621, 1043, 2060
RsaNI	GTAC	5 cut(s)	4, 52, 620, 1042, 2059
RseI	CAYNNNNRTG	3 cut(s)	1484, 2051, 2270
SacII	CCGCGG	1 cut(s)	1240
SapI	GCTCTTC	3 cut(s)	345, 2130, 2330
SaqAI	TTAA	5 cut(s)	1278, 1299, 1433, 1458, 1671
Sau96I	GGNCC	4 cut(s)	181, 317, 1121, 1810
SchI	GAGTC	5 cut(s)	839, 887, 1253, 1303, 1786
ScrFI	CCNGG	3 cut(s)	827, 1073, 1885
SfaNI	GCATC	2 cut(s)	1585, 2071
SfcI	CTRYAG	2 cut(s)	681, 843
Sfr303I	CCGCGG	1 cut(s)	1240
SgrAI	CRCCGGYG	1 cut(s)	980
SgrBI	CCGCGG	1 cut(s)	1240
SinI	GGWCC	3 cut(s)	181, 317, 1810
SmiMI	CAYNNNNRTG	3 cut(s)	1484, 2051, 2270
SmlI	CTYRAG	2 cut(s)	1261, 1532
SmoI	CTYRAG	2 cut(s)	1261, 1532
SpeI	ACTAGT	1 cut(s)	992
SphI	GCATGC	1 cut(s)	2218
Sse9I	AATT	3 cut(s)	576, 949, 1192
SseBI	AGGCCT	1 cut(s)	299
SspMI	CTAG	2 cut(s)	993, 1953
StuI	AGGCCT	1 cut(s)	299
StyD4I	CCNGG	3 cut(s)	825, 1071, 1883
StyI	CCWWGG	1 cut(s)	708
TaaI	ACNGT	4 cut(s)	871, 1810, 2170, 2317
TaiI	ACGT	3 cut(s)	51, 669, 1254
TaqI	TCGA	6 cut(s)	11, 783, 798, 1094, 1463, 2042
TasI	AATT	3 cut(s)	576, 949, 1192
TatI	WGTACW	3 cut(s)	619, 1041, 2058
TauI	GCSGC	7 cut(s)	636, 1239, 1345, 1355, 1450, 1659, 2114
TfiI	GAWTC	6 cut(s)	86, 761, 1101, 1309, 1999, 2383
Tru1I	TTAA	5 cut(s)	1278, 1299, 1433, 1458, 1671
Tru9I	TTAA	5 cut(s)	1278, 1299, 1433, 1458, 1671
TscAI	CASTG	4 cut(s)	121, 532, 1707, 1821
TspDTI	ATGAA	5 cut(s)	453, 1818, 2132, 2265, 2325
TspGWI	ACGGA	2 cut(s)	21, 173
TspRI	CASTG	4 cut(s)	121, 532, 1707, 1821
VpaK11BI	GGWCC	3 cut(s)	181, 317, 1810
XapI	RAATTY	2 cut(s)	949, 1192
XceI	RCATGY	5 cut(s)	393, 959, 2050, 2111, 2218
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2003
XmiI	GTMKAC	2 cut(s)	550, 1528
XmnI	GAANNNNTTC	1 cut(s)	2316
XspI	CTAG	2 cut(s)	993, 1953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.