Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007707

Physical Location & Seq

Genomic Coordinates Reverse (-)

88731792 .. 88736138

Gene Structure 4347 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00151490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGGGCTCGAGAAACGAGGAGCAAACCCCACCGCACCATCAGCCTCTTCTCAGCAGCCTCGTCGTCCGTCCCTCCACCAGCGACGGCGGCGGAGGCGGCGGCGCCGGTGGCCGCGGCAGCGATTACGAGCCCGGCGAGGTCCGTCACGAGCCTCCTCCACCTCCTTACACTCGTCCGGATCGTTACGCCGGTAACCCTGCTCTGAATGTTGCCTGCAAGAACTTGAATCTTGGGGAAGGCATGTTGGTATTGGAAGTTAGAGAGGGATATGTGCTTAAGATGTTTGGAACATGCATGGTGAAAGCATTCTGGGAACTTACCATCACTAAACATTATAATGTTGGTTCATTGAAATTGAAACCAACAGTAAGGCTGGTCTACTTGGGGATGCTGCTGGAAGATGAAAATTTAGGTATTTTTCGCTATACTAATAATATGCGAAGGGAGCTTGTAGAGAAAAAGGCTGCAGAAACCTTGGAACTTTTGGATTCCAACTCATTTAGAATTCACTTTTTCTTTTCCTGTGGGCATGTAAAATTGGTTTCACTGCTACATCTTGCTGGCAAATTTCAACTGTCGGTGTTGGGACAAATTTGCTTTCAGACTATTGTTCTCTGTGCTGAGTATCAATTAGGATATAAAATACGTGGTGGTTCTGCTTCTCCTGTACGTCGTAGGGATGCAGATCATCGCTACAGTTCTGAGTACGGTCATTCAGGTGGTCCACAACGCAGTCGTGGGTTTGGTGGTGCACGGGATCCTGGTCGATATCGAGACAACTCACCTTATGGTCGAGGAGGAAGGGGTGCTGGCAGACCATTTGGTAGAGGTCTAGATGGGCCACGGGTTGGTGCTGGGCAGTTCAGAGTTGAAGGGAGTAGAAACAATCCAAATGTGCGCCCAAGGGAAGGAGACTGGTTTTGCCCTGATCCTTTATGTGGCAACTTGAACTTTGCAAGGCGGGACCACTGTAACAACTGCAACAAGTTCCGTGATGGACCTGGGGGAAGTCCTCGAAGGGGATATCCTGGTGTACCGCCTCCAAATTCTCCACCTAGACGCTTCCCTGGTCCTCCAATTGATCCTCCCCATGGAAGACCCTTGAATGGCTATAGGTCTCCTCCTCGTGGCTGGGCTAGAGATGGCCCCAGAGAGTTTGGTGCTGGGCTGCCACCTCCAAGGCATGAAGGCAGGTTTCCTGACCACCAAATGCGAAGGGATTGGTTGGATTACTCAGACAACTATAGAGGAAGATCCAAGTTTGATAGGCCAATGCCTATGGATAGGGGTAATAGAGATCGCGGGAGGGATAGTTTCTTTGAAAGGAAAGCATTTGAAAGGCAACCACTGTCTCCCCCTTCACCACCACCACCACTTCCTCCTTACCGTGGCCGGTGGGCACATGATGCTAGGCAGAGAAGCCGTTCACCGTTAAGGGGTGGTCTGCCACCAAAGGACTATAACCGGCCTATGTACATGGATCGGGGACGAGATGATCGACGTGGCATGGGGCGAGACCGAATTGGAGGTGCATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023051 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1901796 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 ko05202 map03022 map05202

Pfam Domains

Protein Families

zf-RanBP

Protein Analysis

512

Amino Acids

57.49

Weight (kDa)

10.13

Isoelectric Point (pI)

49.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007707)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28990 AT4G28990
fragaria_vesca	FvH4_1g04330
malus_domestica	MD02G1042900.v1.1 MD15G1181500.v1.1 MD15G1181700.v1.1
prunus_persica	Prupe.7G234000_v2.0.a1 Prupe.7G234000_v2.0.a1 Prupe.7G234000_v2.0.a1
pyrus_communis	pycom02g03570 pycom15g16390
rosa_chinensis	RchiOBHm_Chr2g0088791 RchiOBHm_Chr2g0088801 RchiOBHm_Chr2g0089981
rosa_laevigata	RLG00000016065
rosa_multiflora	Rmu_sc0000226.1_g000022
rosa_roxburghii	Rroxscaffold_2G00151490
rosa_rugosa	Rorug02G0004100
rosa_samantha	Rh2AG049300 Rh2AG049400 Rh2BG048200 Rh2CG050400 Rh2DG049500
rosa_wichuraiana	Rw2G004090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	336
Acc36I	ACCTGC	1 cut(s)	1182
AccB1I	GGYRCC	1 cut(s)	101
AccB7I	CCANNNNNTGG	1 cut(s)	848
AccI	GTMKAC	1 cut(s)	378
AccII	CGCG	2 cut(s)	114, 1302
AccIII	TCCGGA	1 cut(s)	175
AclWI	GGATC	7 cut(s)	186, 752, 765, 923, 1076, 1248, 1488
AcoI	YGGCCR	2 cut(s)	109, 1390
AcsI	RAATTY	5 cut(s)	406, 504, 566, 591, 1045
AcyI	GRCGYC	1 cut(s)	102
AfaI	GTAC	4 cut(s)	669, 707, 1035, 1475
AfiI	CCNNNNNNNGG	9 cut(s)	848, 908, 938, 1019, 1091, 1106, 1127, 1388, 1436
AflII	CTTAAG	1 cut(s)	275
AgsI	TTSAA	9 cut(s)	226, 352, 358, 572, 872, 949, 1105, 1322, 1337
AjiI	CACGTC	1 cut(s)	1502
AjnI	CCWGG	4 cut(s)	760, 1000, 1027, 1066
AluBI	AGCT	1 cut(s)	448
AluI	AGCT	1 cut(s)	448
Alw21I	GWGCWC	1 cut(s)	754
Alw26I	GTCTC	5 cut(s)	768, 906, 1122, 1356, 1509
Alw44I	GTGCAC	1 cut(s)	750
AlwI	GGATC	7 cut(s)	186, 752, 765, 923, 1076, 1248, 1488
Ama87I	CYCGRG	1 cut(s)	7
Aor13HI	TCCGGA	1 cut(s)	175
AoxI	GGCC	6 cut(s)	109, 839, 1144, 1268, 1390, 1466
ApaLI	GTGCAC	1 cut(s)	750
ApeKI	GCWGC	5 cut(s)	54, 117, 391, 464, 1168
ApoI	RAATTY	5 cut(s)	406, 504, 566, 591, 1045
Asp700I	GAANNNNTTC	2 cut(s)	305, 1423
AspLEI	GCGC	2 cut(s)	104, 900
AspS9I	GGNCC	7 cut(s)	139, 722, 839, 964, 998, 1070, 1145
AsuC2I	CCSGG	1 cut(s)	132
AsuHPI	GGTGA	4 cut(s)	310, 774, 1353, 1419
AvaI	CYCGRG	1 cut(s)	7
AvaII	GGWCC	5 cut(s)	139, 722, 964, 998, 1070
BaeGI	GKGCMC	2 cut(s)	754, 1402
BamHI	GGATCC	1 cut(s)	757
BanI	GGYRCC	1 cut(s)	101
BanII	GRGCYC	2 cut(s)	8, 132
BauI	CACGAG	2 cut(s)	146, 1125
BbsI	GAAGAC	1 cut(s)	1102
Bbv12I	GWGCWC	1 cut(s)	754
BbvI	GCAGC	5 cut(s)	66, 129, 378, 451, 1155
BccI	CCATC	5 cut(s)	45, 329, 830, 989, 1136
BceAI	ACGGC	2 cut(s)	100, 1407
BcgI	CGANNNNNNTGC	2 cut(s)	43, 77
BciT130I	CCWGG	4 cut(s)	762, 1002, 1029, 1068
BcnI	CCSGG	1 cut(s)	132
BcoDI	GTCTC	5 cut(s)	768, 906, 1122, 1356, 1509
BfaI	CTAG	4 cut(s)	833, 1056, 1137, 1410
BfmI	CTRYAG	4 cut(s)	465, 694, 1111, 1243
BfoI	RGCGCY	1 cut(s)	105
BfrI	CTTAAG	1 cut(s)	275
BfuAI	ACCTGC	1 cut(s)	1182
Bme1390I	CCNGG	5 cut(s)	132, 762, 1002, 1029, 1068
Bme18I	GGWCC	5 cut(s)	139, 722, 964, 998, 1070
BmeT110I	CYCGRG	1 cut(s)	7
BmgBI	CACGTC	1 cut(s)	1502
BmgT120I	GGNCC	7 cut(s)	139, 722, 839, 964, 998, 1070, 1145
BmiI	GGNNCC	4 cut(s)	103, 759, 965, 1147
BmrFI	CCNGG	5 cut(s)	132, 762, 1002, 1029, 1068
BmsI	GCATC	3 cut(s)	378, 670, 1396
BpiI	GAAGAC	1 cut(s)	1102
BpuMI	CCSGG	1 cut(s)	132
BsaAI	YACGTR	1 cut(s)	647
BsaBI	GATNNNNATC	1 cut(s)	684
BsaHI	GRCGYC	1 cut(s)	102
BsaI	GGTCTC	2 cut(s)	1122, 1509
BsaJI	CCNNGG	9 cut(s)	112, 474, 842, 902, 1001, 1066, 1090, 1178, 1387
BsaWI	WCCGGW	1 cut(s)	175
BsaXI	ACNNNNNCTCC	2 cut(s)	1297, 1327
Bsc4I	CCNNNNNNNGG	9 cut(s)	848, 908, 938, 1019, 1091, 1106, 1127, 1388, 1436
Bse118I	RCCGGY	4 cut(s)	104, 188, 1392, 1464
Bse1I	ACTGG	1 cut(s)	920
Bse8I	GATNNNNATC	1 cut(s)	684
BseAI	TCCGGA	1 cut(s)	175
BseBI	CCWGG	4 cut(s)	762, 1002, 1029, 1068
BseDI	CCNNGG	9 cut(s)	112, 474, 842, 902, 1001, 1066, 1090, 1178, 1387
BseGI	GGATG	2 cut(s)	393, 685
BseJI	GATNNNNATC	1 cut(s)	684
BseLI	CCNNNNNNNGG	9 cut(s)	848, 908, 938, 1019, 1091, 1106, 1127, 1388, 1436
BseMII	CTCAG	4 cut(s)	64, 612, 693, 1248
BseNI	ACTGG	1 cut(s)	920
BseRI	GAGGAG	5 cut(s)	32, 144, 810, 1110, 1113
BseSI	GKGCMC	2 cut(s)	754, 1402
BseXI	GCAGC	5 cut(s)	66, 129, 378, 451, 1155
BseYI	CCCAGC	3 cut(s)	854, 1131, 1163
Bsh1236I	CGCG	2 cut(s)	114, 1302
BshFI	GGCC	6 cut(s)	111, 841, 1146, 1270, 1392, 1468
BshNI	GGYRCC	1 cut(s)	101
BsiHKAI	GWGCWC	1 cut(s)	754
BsiHKCI	CYCGRG	1 cut(s)	7
BsiSI	CCGG	6 cut(s)	105, 132, 176, 189, 1393, 1465
BslFI	GGGAC	4 cut(s)	54, 600, 977, 1500
BslI	CCNNNNNNNGG	9 cut(s)	848, 908, 938, 1019, 1091, 1106, 1127, 1388, 1436
BsmAI	GTCTC	5 cut(s)	768, 906, 1122, 1356, 1509
BsmFI	GGGAC	4 cut(s)	54, 600, 977, 1500
BsmI	GAATGC	1 cut(s)	305
BsnI	GGCC	6 cut(s)	111, 841, 1146, 1270, 1392, 1468
Bso31I	GGTCTC	2 cut(s)	1122, 1509
BsoBI	CYCGRG	1 cut(s)	7
Bsp1286I	GDGCHC	4 cut(s)	8, 132, 754, 1402
Bsp13I	TCCGGA	1 cut(s)	175
Bsp1407I	TGTACA	1 cut(s)	1473
Bsp143I	GATC	9 cut(s)	178, 685, 757, 928, 1081, 1253, 1297, 1480, 1495
Bsp19I	CCATGG	1 cut(s)	1090
BspANI	GGCC	6 cut(s)	111, 841, 1146, 1270, 1392, 1468
BspCNI	CTCAG	4 cut(s)	63, 613, 694, 1247
BspEI	TCCGGA	1 cut(s)	175
BspFNI	CGCG	2 cut(s)	114, 1302
BspLI	GGNNCC	4 cut(s)	103, 759, 965, 1147
BspMAI	CTGCAG	1 cut(s)	469
BspMI	ACCTGC	1 cut(s)	1182
BspPI	GGATC	7 cut(s)	186, 752, 765, 923, 1076, 1248, 1488
BspT107I	GGYRCC	1 cut(s)	101
BspTI	CTTAAG	1 cut(s)	275
BspTNI	GGTCTC	2 cut(s)	1122, 1509
BsrFI	RCCGGY	4 cut(s)	104, 188, 1392, 1464
BsrGI	TGTACA	1 cut(s)	1473
BsrI	ACTGG	1 cut(s)	920
BssAI	RCCGGY	4 cut(s)	104, 188, 1392, 1464
BssECI	CCNNGG	9 cut(s)	112, 474, 842, 902, 1001, 1066, 1090, 1178, 1387
BssMI	GATC	9 cut(s)	178, 685, 757, 928, 1081, 1253, 1297, 1480, 1495
BssNI	GRCGYC	1 cut(s)	102
BssSI	CACGAG	2 cut(s)	146, 1125
BssT1I	CCWWGG	4 cut(s)	474, 902, 1090, 1178
Bst2BI	CACGAG	2 cut(s)	146, 1125
Bst2UI	CCWGG	4 cut(s)	762, 1002, 1029, 1068
Bst4CI	ACNGT	8 cut(s)	367, 576, 698, 710, 971, 1350, 1388, 1431
Bst6I	CTCTTC	1 cut(s)	51
BstACI	GRCGYC	1 cut(s)	102
BstAFI	CTTAAG	1 cut(s)	275
BstAPI	GCANNNNNTGC	1 cut(s)	1406
BstAUI	TGTACA	1 cut(s)	1473
BstBAI	YACGTR	1 cut(s)	647
BstC8I	GCNNGC	3 cut(s)	214, 562, 811
BstDEI	CTNAG	4 cut(s)	50, 621, 702, 1234
BstDSI	CCRYGG	4 cut(s)	112, 842, 1090, 1387
BstEII	GGTNACC	1 cut(s)	191
BstF5I	GGATG	2 cut(s)	393, 685
BstFNI	CGCG	2 cut(s)	114, 1302
BstH2I	RGCGCY	1 cut(s)	105
BstHHI	GCGC	2 cut(s)	104, 900
BstKTI	GATC	9 cut(s)	181, 688, 760, 931, 1084, 1256, 1300, 1483, 1498
BstMAI	GTCTC	5 cut(s)	768, 906, 1122, 1356, 1509
BstMBI	GATC	9 cut(s)	178, 685, 757, 928, 1081, 1253, 1297, 1480, 1495
BstMWI	GCNNNNNNNGC	8 cut(s)	40, 87, 93, 96, 108, 117, 445, 1406
BstNI	CCWGG	4 cut(s)	762, 1002, 1029, 1068
BstNSI	RCATGY	3 cut(s)	244, 294, 533
BstPI	GGTNACC	1 cut(s)	191
BstSCI	CCNGG	5 cut(s)	130, 760, 1000, 1027, 1066
BstSFI	CTRYAG	4 cut(s)	465, 694, 1111, 1243
BstSLI	GKGCMC	2 cut(s)	754, 1402
BstUI	CGCG	2 cut(s)	114, 1302
BstV1I	GCAGC	5 cut(s)	66, 129, 378, 451, 1155
BstV2I	GAAGAC	1 cut(s)	1102
BstX2I	RGATCY	2 cut(s)	757, 1253
BstYI	RGATCY	2 cut(s)	757, 1253
BsuRI	GGCC	6 cut(s)	111, 841, 1146, 1270, 1392, 1468
BtgI	CCRYGG	4 cut(s)	112, 842, 1090, 1387
BtgZI	GCGATG	1 cut(s)	674
BtrI	CACGTC	1 cut(s)	1502
BtsCI	GGATG	2 cut(s)	393, 685
BtsI	GCAGTG	1 cut(s)	545
BtsIMutI	CAGTG	3 cut(s)	545, 967, 1346
BveI	ACCTGC	1 cut(s)	1182
Cac8I	GCNNGC	3 cut(s)	214, 562, 811
CfoI	GCGC	2 cut(s)	104, 900
Cfr10I	RCCGGY	4 cut(s)	104, 188, 1392, 1464
Cfr13I	GGNCC	7 cut(s)	139, 722, 839, 964, 998, 1070, 1145
Cfr42I	CCGCGG	1 cut(s)	115
CseI	GACGC	1 cut(s)	1068
Csp6I	GTAC	4 cut(s)	668, 706, 1034, 1474
CviAII	CATG	9 cut(s)	241, 291, 295, 530, 1091, 1184, 1403, 1477, 1507
CviQI	GTAC	4 cut(s)	668, 706, 1034, 1474
DdeI	CTNAG	4 cut(s)	50, 621, 702, 1234
DinI	GGCGCC	1 cut(s)	103
DpnI	GATC	9 cut(s)	180, 687, 759, 930, 1083, 1255, 1299, 1482, 1497
DpnII	GATC	9 cut(s)	178, 685, 757, 928, 1081, 1253, 1297, 1480, 1495
EaeI	YGGCCR	2 cut(s)	109, 1390
Eam1104I	CTCTTC	1 cut(s)	51
EarI	CTCTTC	1 cut(s)	51
EciI	GGCGGA	1 cut(s)	105
Eco130I	CCWWGG	4 cut(s)	474, 902, 1090, 1178
Eco24I	GRGCYC	2 cut(s)	8, 132
Eco31I	GGTCTC	2 cut(s)	1122, 1509
Eco32I	GATATC	2 cut(s)	770, 1025
Eco47I	GGWCC	5 cut(s)	139, 722, 964, 998, 1070
Eco88I	CYCGRG	1 cut(s)	7
Eco91I	GGTNACC	1 cut(s)	191
EcoO65I	GGTNACC	1 cut(s)	191
EcoRI	GAATTC	1 cut(s)	504
EcoRII	CCWGG	4 cut(s)	760, 1000, 1027, 1066
EcoRV	GATATC	2 cut(s)	770, 1025
EcoT14I	CCWWGG	4 cut(s)	474, 902, 1090, 1178
EcoT22I	ATGCAT	1 cut(s)	296
EcoT38I	GRGCYC	2 cut(s)	8, 132
EgeI	GGCGCC	1 cut(s)	103
EheI	GGCGCC	1 cut(s)	103
ErhI	CCWWGG	4 cut(s)	474, 902, 1090, 1178
FaeI	CATG	9 cut(s)	244, 294, 298, 533, 1094, 1187, 1406, 1480, 1510
FaqI	GGGAC	4 cut(s)	54, 600, 977, 1500
FatI	CATG	9 cut(s)	240, 290, 294, 529, 1090, 1183, 1402, 1476, 1506
FauI	CCCGC	2 cut(s)	954, 1295
FblI	GTMKAC	1 cut(s)	378
FokI	GGATG	2 cut(s)	400, 692
FriOI	GRGCYC	2 cut(s)	8, 132
FspBI	CTAG	4 cut(s)	833, 1056, 1137, 1410
GlaI	GCGC	2 cut(s)	103, 899
GsaI	CCCAGC	3 cut(s)	858, 1135, 1167
HaeII	RGCGCY	1 cut(s)	105
HaeIII	GGCC	6 cut(s)	111, 841, 1146, 1270, 1392, 1468
HapII	CCGG	6 cut(s)	105, 132, 176, 189, 1393, 1465
HgaI	GACGC	1 cut(s)	1068
HhaI	GCGC	2 cut(s)	104, 900
Hin1I	GRCGYC	1 cut(s)	102
Hin1II	CATG	9 cut(s)	244, 294, 298, 533, 1094, 1187, 1406, 1480, 1510
Hin6I	GCGC	2 cut(s)	102, 898
HinP1I	GCGC	2 cut(s)	102, 898
HinfI	GANTC	2 cut(s)	226, 488
HpaII	CCGG	6 cut(s)	105, 132, 176, 189, 1393, 1465
HphI	GGTGA	4 cut(s)	310, 774, 1353, 1419
Hpy166II	GTNNAC	5 cut(s)	379, 725, 752, 1034, 1427
Hpy188I	TCNGA	5 cut(s)	204, 603, 703, 866, 1237
Hpy188III	TCNNGA	6 cut(s)	9, 146, 176, 773, 833, 1199
Hpy8I	GTNNAC	5 cut(s)	379, 725, 752, 1034, 1427
Hpy99I	CGWCG	4 cut(s)	65, 86, 675, 1503
HpyAV	CCTTC	9 cut(s)	230, 435, 795, 866, 902, 1011, 1181, 1209, 1368
HpyCH4III	ACNGT	8 cut(s)	367, 576, 698, 710, 971, 1350, 1388, 1431
HpyCH4IV	ACGT	3 cut(s)	646, 670, 1501
HpyCH4V	TGCA	8 cut(s)	216, 294, 467, 683, 752, 956, 981, 1532
HpyF10VI	GCNNNNNNNGC	8 cut(s)	40, 87, 93, 96, 108, 117, 445, 1406
HpyF3I	CTNAG	4 cut(s)	50, 621, 702, 1234
HpySE526I	ACGT	3 cut(s)	646, 670, 1501
Hsp92I	GRCGYC	1 cut(s)	102
Hsp92II	CATG	9 cut(s)	244, 294, 298, 533, 1094, 1187, 1406, 1480, 1510
HspAI	GCGC	2 cut(s)	102, 898
KasI	GGCGCC	1 cut(s)	101
Kpn2I	TCCGGA	1 cut(s)	175
KspI	CCGCGG	1 cut(s)	115
Kzo9I	GATC	9 cut(s)	178, 685, 757, 928, 1081, 1253, 1297, 1480, 1495
LmnI	GCTCC	2 cut(s)	19, 445
Lsp1109I	GCAGC	5 cut(s)	66, 129, 378, 451, 1155
LweI	GCATC	3 cut(s)	378, 670, 1396
MaeI	CTAG	4 cut(s)	833, 1056, 1137, 1410
MaeII	ACGT	3 cut(s)	646, 670, 1501
MaeIII	GTNAC	4 cut(s)	143, 182, 191, 971
MalI	GATC	9 cut(s)	180, 687, 759, 930, 1083, 1255, 1299, 1482, 1497
MboI	GATC	9 cut(s)	178, 685, 757, 928, 1081, 1253, 1297, 1480, 1495
MboII	GAAGA	4 cut(s)	38, 410, 1107, 1263
MfeI	CAATTG	1 cut(s)	1077
MflI	RGATCY	2 cut(s)	757, 1253
MhlI	GDGCHC	4 cut(s)	8, 132, 754, 1402
Mly113I	GGCGCC	1 cut(s)	102
MmeI	TCCRAC	2 cut(s)	516, 1206
Mph1103I	ATGCAT	1 cut(s)	296
MroI	TCCGGA	1 cut(s)	175
MroXI	GAANNNNTTC	2 cut(s)	305, 1423
MseI	TTAA	3 cut(s)	276, 1433, 1537
MslI	CAYNNNNRTG	2 cut(s)	336, 717
MspA1I	CMGCKG	1 cut(s)	114
MspCI	CTTAAG	1 cut(s)	275
MspI	CCGG	6 cut(s)	105, 132, 176, 189, 1393, 1465
MspR9I	CCNGG	5 cut(s)	132, 762, 1002, 1029, 1068
MunI	CAATTG	1 cut(s)	1077
Mva1269I	GAATGC	1 cut(s)	305
MvaI	CCWGG	4 cut(s)	762, 1002, 1029, 1068
MvnI	CGCG	2 cut(s)	114, 1302
MwoI	GCNNNNNNNGC	8 cut(s)	40, 87, 93, 96, 108, 117, 445, 1406
NarI	GGCGCC	1 cut(s)	102
NciI	CCSGG	1 cut(s)	132
NcoI	CCATGG	1 cut(s)	1090
NdeII	GATC	9 cut(s)	178, 685, 757, 928, 1081, 1253, 1297, 1480, 1495
NlaIII	CATG	9 cut(s)	244, 294, 298, 533, 1094, 1187, 1406, 1480, 1510
NlaIV	GGNNCC	4 cut(s)	103, 759, 965, 1147
NmuCI	GTSAC	1 cut(s)	143
NsiI	ATGCAT	1 cut(s)	296
NspI	RCATGY	3 cut(s)	244, 294, 533
PaeR7I	CTCGAG	1 cut(s)	7
PcsI	WCGNNNNNNNCGW	3 cut(s)	132, 178, 1495
PctI	GAATGC	1 cut(s)	305
PdmI	GAANNNNTTC	2 cut(s)	305, 1423
PfeI	GAWTC	2 cut(s)	226, 488
PflMI	CCANNNNNTGG	1 cut(s)	848
PluTI	GGCGCC	1 cut(s)	105
Ppu21I	YACGTR	1 cut(s)	647
PsiI	TTATAA	1 cut(s)	336
Psp6I	CCWGG	4 cut(s)	760, 1000, 1027, 1066
PspEI	GGTNACC	1 cut(s)	191
PspFI	CCCAGC	3 cut(s)	854, 1131, 1163
PspGI	CCWGG	4 cut(s)	760, 1000, 1027, 1066
PspN4I	GGNNCC	4 cut(s)	103, 759, 965, 1147
PspPI	GGNCC	7 cut(s)	139, 722, 839, 964, 998, 1070, 1145
PstI	CTGCAG	1 cut(s)	469
PsuI	RGATCY	2 cut(s)	757, 1253
RsaI	GTAC	4 cut(s)	669, 707, 1035, 1475
RsaNI	GTAC	4 cut(s)	668, 706, 1034, 1474
RseI	CAYNNNNRTG	2 cut(s)	336, 717
SacII	CCGCGG	1 cut(s)	115
SaqAI	TTAA	3 cut(s)	276, 1433, 1537
Sau3AI	GATC	9 cut(s)	178, 685, 757, 928, 1081, 1253, 1297, 1480, 1495
Sau96I	GGNCC	7 cut(s)	139, 722, 839, 964, 998, 1070, 1145
ScrFI	CCNGG	5 cut(s)	132, 762, 1002, 1029, 1068
SduI	GDGCHC	4 cut(s)	8, 132, 754, 1402
SfaNI	GCATC	3 cut(s)	378, 670, 1396
SfcI	CTRYAG	4 cut(s)	465, 694, 1111, 1243
SfoI	GGCGCC	1 cut(s)	103
Sfr274I	CTCGAG	1 cut(s)	7
Sfr303I	CCGCGG	1 cut(s)	115
SgrAI	CRCCGGYG	1 cut(s)	104
SgrBI	CCGCGG	1 cut(s)	115
SinI	GGWCC	5 cut(s)	139, 722, 964, 998, 1070
SlaI	CTCGAG	1 cut(s)	7
SmiMI	CAYNNNNRTG	2 cut(s)	336, 717
SmlI	CTYRAG	2 cut(s)	7, 275
SmoI	CTYRAG	2 cut(s)	7, 275
SspDI	GGCGCC	1 cut(s)	101
SspMI	CTAG	4 cut(s)	833, 1056, 1137, 1410
StyD4I	CCNGG	5 cut(s)	130, 760, 1000, 1027, 1066
StyI	CCWWGG	4 cut(s)	474, 902, 1090, 1178
TaaI	ACNGT	8 cut(s)	367, 576, 698, 710, 971, 1350, 1388, 1431
TaiI	ACGT	3 cut(s)	649, 673, 1504
TaqI	TCGA	6 cut(s)	8, 766, 772, 793, 1015, 1498
TaqII	GACCGA	1 cut(s)	1533
TatI	WGTACW	1 cut(s)	1473
TauI	GCSGC	5 cut(s)	90, 99, 102, 114, 117
TfiI	GAWTC	2 cut(s)	226, 488
Tru1I	TTAA	3 cut(s)	276, 1433, 1537
Tru9I	TTAA	3 cut(s)	276, 1433, 1537
TscAI	CASTG	3 cut(s)	552, 974, 1353
TseFI	GTSAC	1 cut(s)	143
TseI	GCWGC	5 cut(s)	54, 117, 391, 464, 1168
Tsp45I	GTSAC	1 cut(s)	143
TspDTI	ATGAA	3 cut(s)	336, 417, 1200
TspGWI	ACGGA	3 cut(s)	56, 131, 980
TspRI	CASTG	3 cut(s)	552, 974, 1353
Van91I	CCANNNNNTGG	1 cut(s)	848
Vha464I	CTTAAG	1 cut(s)	275
VneI	GTGCAC	1 cut(s)	750
VpaK11BI	GGWCC	5 cut(s)	139, 722, 964, 998, 1070
XapI	RAATTY	5 cut(s)	406, 504, 566, 591, 1045
XbaI	TCTAGA	1 cut(s)	832
XceI	RCATGY	3 cut(s)	244, 294, 533
XhoI	CTCGAG	1 cut(s)	7
XmiI	GTMKAC	1 cut(s)	378
XmnI	GAANNNNTTC	2 cut(s)	305, 1423
XspI	CTAG	4 cut(s)	833, 1056, 1137, 1410
Zsp2I	ATGCAT	1 cut(s)	296

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.