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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g32801 |
| rosa_laevigata | RLG00000034237 |
| rosa_multiflora | Rmu_sc0000483.1_g000027 Rmu_sc0000551.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00012730 Rroxscaffold_3G00229660 |
| rosa_samantha | Rh1CG405100 Rh5AG343100 Rh6CG223000 Rh7AG416700 Rh7DG365500 Rh7DG410900 |
| rosa_wichuraiana | Rw7G034500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 225 |
| AccII | CGCG | 1 cut(s) | 220 |
| AccIII | TCCGGA | 1 cut(s) | 50 |
| AciI | CCGC | 4 cut(s) | 164, 215, 218, 223 |
| AcyI | GRCGYC | 1 cut(s) | 186 |
| AflIII | ACRYGT | 1 cut(s) | 312 |
| AgsI | TTSAA | 1 cut(s) | 98 |
| Aor13HI | TCCGGA | 1 cut(s) | 50 |
| AoxI | GGCC | 2 cut(s) | 285, 306 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 133 |
| AspLEI | GCGC | 1 cut(s) | 222 |
| AsuHPI | GGTGA | 1 cut(s) | 204 |
| BbsI | GAAGAC | 1 cut(s) | 231 |
| BceAI | ACGGC | 1 cut(s) | 260 |
| BglII | AGATCT | 1 cut(s) | 202 |
| BisI | GCNGC | 2 cut(s) | 218, 223 |
| BlsI | GCNGC | 2 cut(s) | 219, 224 |
| BmiI | GGNNCC | 2 cut(s) | 55, 168 |
| BmsI | GCATC | 2 cut(s) | 57, 262 |
| BpiI | GAAGAC | 1 cut(s) | 231 |
| BsaHI | GRCGYC | 1 cut(s) | 186 |
| BsaJI | CCNNGG | 3 cut(s) | 40, 159, 181 |
| BsaWI | WCCGGW | 1 cut(s) | 50 |
| BseAI | TCCGGA | 1 cut(s) | 50 |
| BseDI | CCNNGG | 3 cut(s) | 40, 159, 181 |
| Bsh1236I | CGCG | 1 cut(s) | 220 |
| BshFI | GGCC | 2 cut(s) | 287, 308 |
| BsiSI | CCGG | 1 cut(s) | 51 |
| BsmI | GAATGC | 1 cut(s) | 271 |
| BsnI | GGCC | 2 cut(s) | 287, 308 |
| Bsp13I | TCCGGA | 1 cut(s) | 50 |
| Bsp143I | GATC | 3 cut(s) | 138, 202, 247 |
| Bsp19I | CCATGG | 2 cut(s) | 40, 159 |
| BspACI | CCGC | 4 cut(s) | 164, 215, 218, 223 |
| BspANI | GGCC | 2 cut(s) | 287, 308 |
| BspEI | TCCGGA | 1 cut(s) | 50 |
| BspFNI | CGCG | 1 cut(s) | 220 |
| BspLI | GGNNCC | 2 cut(s) | 55, 168 |
| BsrBI | CCGCTC | 1 cut(s) | 225 |
| BssECI | CCNNGG | 3 cut(s) | 40, 159, 181 |
| BssMI | GATC | 3 cut(s) | 138, 202, 247 |
| BssNI | GRCGYC | 1 cut(s) | 186 |
| BssT1I | CCWWGG | 2 cut(s) | 40, 159 |
| Bst4CI | ACNGT | 2 cut(s) | 134, 258 |
| Bst6I | CTCTTC | 1 cut(s) | 167 |
| BstACI | GRCGYC | 1 cut(s) | 186 |
| BstDSI | CCRYGG | 2 cut(s) | 40, 159 |
| BstFNI | CGCG | 1 cut(s) | 220 |
| BstHHI | GCGC | 1 cut(s) | 222 |
| BstKTI | GATC | 3 cut(s) | 141, 205, 250 |
| BstMBI | GATC | 3 cut(s) | 138, 202, 247 |
| BstNSI | RCATGY | 1 cut(s) | 316 |
| BstUI | CGCG | 1 cut(s) | 220 |
| BstV2I | GAAGAC | 1 cut(s) | 231 |
| BstX2I | RGATCY | 1 cut(s) | 202 |
| BstYI | RGATCY | 1 cut(s) | 202 |
| BsuRI | GGCC | 2 cut(s) | 287, 308 |
| BtgI | CCRYGG | 2 cut(s) | 40, 159 |
| CfoI | GCGC | 1 cut(s) | 222 |
| CseI | GACGC | 1 cut(s) | 175 |
| CviAII | CATG | 3 cut(s) | 41, 160, 313 |
| CviJI | RGCY | 4 cut(s) | 158, 169, 287, 308 |
| CviKI_1 | RGCY | 4 cut(s) | 158, 169, 287, 308 |
| DpnI | GATC | 3 cut(s) | 140, 204, 249 |
| DpnII | GATC | 3 cut(s) | 138, 202, 247 |
| Eam1104I | CTCTTC | 1 cut(s) | 167 |
| EarI | CTCTTC | 1 cut(s) | 167 |
| EciI | GGCGGA | 1 cut(s) | 179 |
| Eco130I | CCWWGG | 2 cut(s) | 40, 159 |
| EcoT14I | CCWWGG | 2 cut(s) | 40, 159 |
| ErhI | CCWWGG | 2 cut(s) | 40, 159 |
| FaeI | CATG | 3 cut(s) | 44, 163, 316 |
| FaiI | YATR | 5 cut(s) | 42, 149, 161, 195, 314 |
| FatI | CATG | 3 cut(s) | 40, 159, 312 |
| Fnu4HI | GCNGC | 2 cut(s) | 218, 223 |
| Fsp4HI | GCNGC | 2 cut(s) | 218, 223 |
| GlaI | GCGC | 1 cut(s) | 221 |
| GluI | GCNGC | 2 cut(s) | 218, 223 |
| HaeIII | GGCC | 2 cut(s) | 287, 308 |
| HapII | CCGG | 1 cut(s) | 51 |
| HgaI | GACGC | 1 cut(s) | 175 |
| HhaI | GCGC | 1 cut(s) | 222 |
| Hin1I | GRCGYC | 1 cut(s) | 186 |
| Hin1II | CATG | 3 cut(s) | 44, 163, 316 |
| Hin6I | GCGC | 1 cut(s) | 220 |
| HinP1I | GCGC | 1 cut(s) | 220 |
| HpaII | CCGG | 1 cut(s) | 51 |
| HphI | GGTGA | 1 cut(s) | 204 |
| Hpy188I | TCNGA | 2 cut(s) | 20, 244 |
| Hpy188III | TCNNGA | 3 cut(s) | 51, 126, 280 |
| Hpy99I | CGWCG | 6 cut(s) | 191, 232, 235, 238, 248, 262 |
| HpyAV | CCTTC | 4 cut(s) | 90, 99, 104, 277 |
| HpyCH4III | ACNGT | 2 cut(s) | 134, 258 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 26 |
| Hsp92I | GRCGYC | 1 cut(s) | 186 |
| Hsp92II | CATG | 3 cut(s) | 44, 163, 316 |
| HspAI | GCGC | 1 cut(s) | 220 |
| Kpn2I | TCCGGA | 1 cut(s) | 50 |
| Kzo9I | GATC | 3 cut(s) | 138, 202, 247 |
| LmnI | GCTCC | 1 cut(s) | 166 |
| LpnPI | CCDG | 1 cut(s) | 64 |
| LweI | GCATC | 2 cut(s) | 57, 262 |
| MalI | GATC | 3 cut(s) | 140, 204, 249 |
| MbiI | CCGCTC | 1 cut(s) | 225 |
| MboI | GATC | 3 cut(s) | 138, 202, 247 |
| MboII | GAAGA | 5 cut(s) | 164, 184, 212, 231, 274 |
| MflI | RGATCY | 1 cut(s) | 202 |
| MmeI | TCCRAC | 1 cut(s) | 267 |
| MnlI | CCTC | 4 cut(s) | 54, 94, 118, 176 |
| MroI | TCCGGA | 1 cut(s) | 50 |
| MroXI | GAANNNNTTC | 1 cut(s) | 133 |
| MspI | CCGG | 1 cut(s) | 51 |
| Mva1269I | GAATGC | 1 cut(s) | 271 |
| MvnI | CGCG | 1 cut(s) | 220 |
| NcoI | CCATGG | 2 cut(s) | 40, 159 |
| NdeII | GATC | 3 cut(s) | 138, 202, 247 |
| NlaIII | CATG | 3 cut(s) | 44, 163, 316 |
| NlaIV | GGNNCC | 2 cut(s) | 55, 168 |
| NspI | RCATGY | 1 cut(s) | 316 |
| PciI | ACATGT | 1 cut(s) | 312 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 233 |
| PctI | GAATGC | 1 cut(s) | 271 |
| PdmI | GAANNNNTTC | 1 cut(s) | 133 |
| PkrI | GCNGC | 2 cut(s) | 219, 224 |
| PscI | ACATGT | 1 cut(s) | 312 |
| PspN4I | GGNNCC | 2 cut(s) | 55, 168 |
| PsuI | RGATCY | 1 cut(s) | 202 |
| SatI | GCNGC | 2 cut(s) | 218, 223 |
| Sau3AI | GATC | 3 cut(s) | 138, 202, 247 |
| SfaNI | GCATC | 2 cut(s) | 57, 262 |
| SsiI | CCGC | 4 cut(s) | 164, 215, 218, 223 |
| StyI | CCWWGG | 2 cut(s) | 40, 159 |
| TaaI | ACNGT | 2 cut(s) | 134, 258 |
| TaqI | TCGA | 3 cut(s) | 127, 137, 260 |
| TauI | GCSGC | 2 cut(s) | 220, 225 |
| XceI | RCATGY | 1 cut(s) | 316 |
| XmnI | GAANNNNTTC | 1 cut(s) | 133 |