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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g32801 |
| rosa_laevigata | RLG00000034237 |
| rosa_multiflora | Rmu_sc0000483.1_g000027 Rmu_sc0000551.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00012730 Rroxscaffold_3G00229660 |
| rosa_samantha | Rh1CG405100 Rh5AG343100 Rh6CG223000 Rh7AG416700 Rh7DG365500 Rh7DG410900 |
| rosa_wichuraiana | Rw7G034500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 135 |
| AciI | CCGC | 2 cut(s) | 41, 133 |
| AcsI | RAATTY | 1 cut(s) | 53 |
| AcyI | GRCGYC | 1 cut(s) | 101 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 14, 40, 41 |
| AflIII | ACRYGT | 1 cut(s) | 204 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 166 |
| AjnI | CCWGG | 1 cut(s) | 94 |
| AluBI | AGCT | 1 cut(s) | 21 |
| AluI | AGCT | 1 cut(s) | 21 |
| AoxI | GGCC | 1 cut(s) | 177 |
| ApeKI | GCWGC | 1 cut(s) | 18 |
| ApoI | RAATTY | 1 cut(s) | 53 |
| BbvI | GCAGC | 1 cut(s) | 30 |
| BceAI | ACGGC | 1 cut(s) | 151 |
| BciT130I | CCWGG | 1 cut(s) | 96 |
| BglII | AGATCT | 1 cut(s) | 117 |
| BisI | GCNGC | 1 cut(s) | 19 |
| BlsI | GCNGC | 1 cut(s) | 20 |
| Bme1390I | CCNGG | 1 cut(s) | 96 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 166 |
| BmiI | GGNNCC | 2 cut(s) | 32, 81 |
| BmrFI | CCNGG | 1 cut(s) | 96 |
| BsaHI | GRCGYC | 1 cut(s) | 101 |
| BsaJI | CCNNGG | 2 cut(s) | 72, 95 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 14, 40, 41 |
| BseBI | CCWGG | 1 cut(s) | 96 |
| BseDI | CCNNGG | 2 cut(s) | 72, 95 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 14, 40, 41 |
| BseXI | GCAGC | 1 cut(s) | 30 |
| BshFI | GGCC | 1 cut(s) | 179 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 14, 40, 41 |
| BsnI | GGCC | 1 cut(s) | 179 |
| Bsp143I | GATC | 1 cut(s) | 117 |
| Bsp19I | CCATGG | 1 cut(s) | 72 |
| BspACI | CCGC | 2 cut(s) | 41, 133 |
| BspANI | GGCC | 1 cut(s) | 179 |
| BspLI | GGNNCC | 2 cut(s) | 32, 81 |
| BsrBI | CCGCTC | 1 cut(s) | 135 |
| BssECI | CCNNGG | 2 cut(s) | 72, 95 |
| BssMI | GATC | 1 cut(s) | 117 |
| BssNI | GRCGYC | 1 cut(s) | 101 |
| BssT1I | CCWWGG | 1 cut(s) | 72 |
| Bst2UI | CCWGG | 1 cut(s) | 96 |
| Bst6I | CTCTTC | 1 cut(s) | 81 |
| BstACI | GRCGYC | 1 cut(s) | 101 |
| BstDSI | CCRYGG | 1 cut(s) | 72 |
| BstKTI | GATC | 1 cut(s) | 120 |
| BstMBI | GATC | 1 cut(s) | 117 |
| BstNI | CCWGG | 1 cut(s) | 96 |
| BstNSI | RCATGY | 1 cut(s) | 208 |
| BstSCI | CCNGG | 1 cut(s) | 94 |
| BstV1I | GCAGC | 1 cut(s) | 30 |
| BstX2I | RGATCY | 1 cut(s) | 117 |
| BstYI | RGATCY | 1 cut(s) | 117 |
| BsuRI | GGCC | 1 cut(s) | 179 |
| BtgI | CCRYGG | 1 cut(s) | 72 |
| CseI | GACGC | 1 cut(s) | 90 |
| CviAII | CATG | 2 cut(s) | 73, 205 |
| CviJI | RGCY | 7 cut(s) | 21, 31, 71, 82, 166, 179, 200 |
| CviKI_1 | RGCY | 7 cut(s) | 21, 31, 71, 82, 166, 179, 200 |
| DpnI | GATC | 1 cut(s) | 119 |
| DpnII | GATC | 1 cut(s) | 117 |
| DriI | GACNNNNNGTC | 1 cut(s) | 166 |
| Eam1104I | CTCTTC | 1 cut(s) | 81 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 166 |
| EarI | CTCTTC | 1 cut(s) | 81 |
| Eco130I | CCWWGG | 1 cut(s) | 72 |
| EcoRII | CCWGG | 1 cut(s) | 94 |
| EcoT14I | CCWWGG | 1 cut(s) | 72 |
| ErhI | CCWWGG | 1 cut(s) | 72 |
| FaeI | CATG | 2 cut(s) | 76, 208 |
| FaiI | YATR | 5 cut(s) | 38, 62, 74, 110, 206 |
| FatI | CATG | 2 cut(s) | 72, 204 |
| FauI | CCCGC | 1 cut(s) | 34 |
| Fnu4HI | GCNGC | 1 cut(s) | 19 |
| Fsp4HI | GCNGC | 1 cut(s) | 19 |
| GluI | GCNGC | 1 cut(s) | 19 |
| HaeIII | GGCC | 1 cut(s) | 179 |
| HgaI | GACGC | 1 cut(s) | 90 |
| Hin1I | GRCGYC | 1 cut(s) | 101 |
| Hin1II | CATG | 2 cut(s) | 76, 208 |
| Hpy188III | TCNNGA | 1 cut(s) | 24 |
| Hpy99I | CGWCG | 6 cut(s) | 106, 142, 145, 148, 158, 172 |
| HpyAV | CCTTC | 2 cut(s) | 21, 169 |
| Hsp92I | GRCGYC | 1 cut(s) | 101 |
| Hsp92II | CATG | 2 cut(s) | 76, 208 |
| Kzo9I | GATC | 1 cut(s) | 117 |
| LmnI | GCTCC | 2 cut(s) | 36, 79 |
| LpnPI | CCDG | 4 cut(s) | 9, 81, 96, 108 |
| Lsp1109I | GCAGC | 1 cut(s) | 30 |
| MalI | GATC | 1 cut(s) | 119 |
| MbiI | CCGCTC | 1 cut(s) | 135 |
| MboI | GATC | 1 cut(s) | 117 |
| MboII | GAAGA | 4 cut(s) | 77, 98, 127, 184 |
| MflI | RGATCY | 1 cut(s) | 117 |
| MluCI | AATT | 1 cut(s) | 53 |
| MspR9I | CCNGG | 1 cut(s) | 96 |
| MvaI | CCWGG | 1 cut(s) | 96 |
| NcoI | CCATGG | 1 cut(s) | 72 |
| NdeII | GATC | 1 cut(s) | 117 |
| NlaIII | CATG | 2 cut(s) | 76, 208 |
| NlaIV | GGNNCC | 2 cut(s) | 32, 81 |
| NspI | RCATGY | 1 cut(s) | 208 |
| PciI | ACATGT | 1 cut(s) | 204 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 143 |
| PkrI | GCNGC | 1 cut(s) | 20 |
| PscI | ACATGT | 1 cut(s) | 204 |
| Psp6I | CCWGG | 1 cut(s) | 94 |
| PspGI | CCWGG | 1 cut(s) | 94 |
| PspN4I | GGNNCC | 2 cut(s) | 32, 81 |
| PsuI | RGATCY | 1 cut(s) | 117 |
| SatI | GCNGC | 1 cut(s) | 19 |
| Sau3AI | GATC | 1 cut(s) | 117 |
| ScrFI | CCNGG | 1 cut(s) | 96 |
| SetI | ASST | 1 cut(s) | 23 |
| Sse9I | AATT | 1 cut(s) | 53 |
| SsiI | CCGC | 2 cut(s) | 41, 133 |
| StyD4I | CCNGG | 1 cut(s) | 94 |
| StyI | CCWWGG | 1 cut(s) | 72 |
| TaqI | TCGA | 2 cut(s) | 153, 170 |
| TasI | AATT | 1 cut(s) | 53 |
| TseI | GCWGC | 1 cut(s) | 18 |
| TspDTI | ATGAA | 1 cut(s) | 66 |
| XapI | RAATTY | 1 cut(s) | 53 |
| XceI | RCATGY | 1 cut(s) | 208 |