No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g32801 |
| rosa_laevigata | RLG00000034237 |
| rosa_multiflora | Rmu_sc0000483.1_g000027 Rmu_sc0000551.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00012730 Rroxscaffold_3G00229660 |
| rosa_samantha | Rh1CG405100 Rh5AG343100 Rh6CG223000 Rh7AG416700 Rh7DG365500 Rh7DG410900 |
| rosa_wichuraiana | Rw7G034500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 63 |
| AciI | CCGC | 3 cut(s) | 5, 61, 108 |
| AcyI | GRCGYC | 1 cut(s) | 29 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 94 |
| AoxI | GGCC | 2 cut(s) | 105, 123 |
| ApeKI | GCWGC | 2 cut(s) | 110, 146 |
| BbvI | GCAGC | 2 cut(s) | 97, 133 |
| BccI | CCATC | 1 cut(s) | 122 |
| BceAI | ACGGC | 1 cut(s) | 79 |
| BfaI | CTAG | 1 cut(s) | 23 |
| BglII | AGATCT | 1 cut(s) | 45 |
| BisI | GCNGC | 4 cut(s) | 61, 108, 111, 147 |
| BlsI | GCNGC | 4 cut(s) | 62, 109, 112, 148 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 94 |
| BmiI | GGNNCC | 1 cut(s) | 9 |
| BsaHI | GRCGYC | 1 cut(s) | 29 |
| BseXI | GCAGC | 2 cut(s) | 97, 133 |
| BshFI | GGCC | 2 cut(s) | 107, 125 |
| BsnI | GGCC | 2 cut(s) | 107, 125 |
| Bsp143I | GATC | 1 cut(s) | 45 |
| BspACI | CCGC | 3 cut(s) | 5, 61, 108 |
| BspANI | GGCC | 2 cut(s) | 107, 125 |
| BspLI | GGNNCC | 1 cut(s) | 9 |
| BsrBI | CCGCTC | 1 cut(s) | 63 |
| BssMI | GATC | 1 cut(s) | 45 |
| BssNI | GRCGYC | 1 cut(s) | 29 |
| Bst6I | CTCTTC | 1 cut(s) | 9 |
| BstACI | GRCGYC | 1 cut(s) | 29 |
| BstKTI | GATC | 1 cut(s) | 48 |
| BstMBI | GATC | 1 cut(s) | 45 |
| BstV1I | GCAGC | 2 cut(s) | 97, 133 |
| BstX2I | RGATCY | 1 cut(s) | 45 |
| BstYI | RGATCY | 1 cut(s) | 45 |
| BsuRI | GGCC | 2 cut(s) | 107, 125 |
| BtsI | GCAGTG | 1 cut(s) | 55 |
| BtsIMutI | CAGTG | 1 cut(s) | 55 |
| CseI | GACGC | 1 cut(s) | 18 |
| CviAII | CATG | 1 cut(s) | 151 |
| CviJI | RGCY | 5 cut(s) | 10, 94, 107, 125, 146 |
| CviKI_1 | RGCY | 5 cut(s) | 10, 94, 107, 125, 146 |
| DpnI | GATC | 1 cut(s) | 47 |
| DpnII | GATC | 1 cut(s) | 45 |
| DriI | GACNNNNNGTC | 1 cut(s) | 94 |
| Eam1104I | CTCTTC | 1 cut(s) | 9 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 94 |
| EarI | CTCTTC | 1 cut(s) | 9 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| FaeI | CATG | 1 cut(s) | 154 |
| FaiI | YATR | 2 cut(s) | 38, 152 |
| FatI | CATG | 1 cut(s) | 150 |
| Fnu4HI | GCNGC | 4 cut(s) | 61, 108, 111, 147 |
| Fsp4HI | GCNGC | 4 cut(s) | 61, 108, 111, 147 |
| FspBI | CTAG | 1 cut(s) | 23 |
| GluI | GCNGC | 4 cut(s) | 61, 108, 111, 147 |
| HaeIII | GGCC | 2 cut(s) | 107, 125 |
| HgaI | GACGC | 1 cut(s) | 18 |
| Hin1I | GRCGYC | 1 cut(s) | 29 |
| Hin1II | CATG | 1 cut(s) | 154 |
| Hpy188III | TCNNGA | 1 cut(s) | 118 |
| Hpy99I | CGWCG | 2 cut(s) | 34, 100 |
| HpyAV | CCTTC | 2 cut(s) | 97, 115 |
| Hsp92I | GRCGYC | 1 cut(s) | 29 |
| Hsp92II | CATG | 1 cut(s) | 154 |
| Kzo9I | GATC | 1 cut(s) | 45 |
| LmnI | GCTCC | 1 cut(s) | 7 |
| LpnPI | CCDG | 1 cut(s) | 24 |
| Lsp1109I | GCAGC | 2 cut(s) | 97, 133 |
| MaeI | CTAG | 1 cut(s) | 23 |
| MalI | GATC | 1 cut(s) | 47 |
| MbiI | CCGCTC | 1 cut(s) | 63 |
| MboI | GATC | 1 cut(s) | 45 |
| MboII | GAAGA | 4 cut(s) | 26, 55, 69, 112 |
| MflI | RGATCY | 1 cut(s) | 45 |
| MspA1I | CMGCKG | 1 cut(s) | 110 |
| NdeII | GATC | 1 cut(s) | 45 |
| NlaIII | CATG | 1 cut(s) | 154 |
| NlaIV | GGNNCC | 1 cut(s) | 9 |
| PkrI | GCNGC | 4 cut(s) | 62, 109, 112, 148 |
| PspN4I | GGNNCC | 1 cut(s) | 9 |
| PsuI | RGATCY | 1 cut(s) | 45 |
| SatI | GCNGC | 4 cut(s) | 61, 108, 111, 147 |
| Sau3AI | GATC | 1 cut(s) | 45 |
| SgeI | CNNG | 5 cut(s) | 23, 35, 103, 130, 148 |
| SsiI | CCGC | 3 cut(s) | 5, 61, 108 |
| SspMI | CTAG | 1 cut(s) | 23 |
| TaqI | TCGA | 1 cut(s) | 98 |
| TauI | GCSGC | 2 cut(s) | 63, 110 |
| TscAI | CASTG | 1 cut(s) | 62 |
| TseI | GCWGC | 2 cut(s) | 110, 146 |
| TspRI | CASTG | 1 cut(s) | 62 |
| XspI | CTAG | 1 cut(s) | 23 |