Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0010629

Physical Location & Seq

Genomic Coordinates Reverse (-)

33621207 .. 33630541

Gene Structure 9335 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00241370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGCATATGAGTGGAAAGATGGTTTGTTTTGATTCTGTAAGTAGTTATCTCCTGTCTCTGGCAAAGAGCTGGGGAAGCAAGGAAGAGGGGCTGGATTTATTTTCACTTGTCATGGCAAATGATAGTACCCAAGATGATGAGCTGAATATGTTCCCAACTGATGTAGGAGAAGGTGATTACAAATATCAGTACCAAACAGGTTCTACACCTTATTTTGAATCGCATGGGAATACCCAAAGTACAGAGGAGAGCAGCAGCAATGCAAATAATACTTCCAGTTACGGAGTTATACACATGCCAGATCTCCATTTACTGGAGGATGATTTAAAGCTCATGGGACAGTTTATAAAGGACTACAGAGTACCTCCTGAGATCTGGTTCTCACTTCTGACAAGAATCAGATATGCCCATGCCTTCTGTTCACCAAGAACCTGCAAGCTGTACAGGAGGATTTGCCTTCTTGCATTTACTGTGCTTGTTCAAGCTAGTGATGCTCCTGAAGAACTTCTGTCTTTCTTTGCTAATAAGCCAGACTATATTAGTAGATCAATTAGAATTGTGCCATCAGAAGAAGTAGTTTCTGGAACCATCAGAACAAATACAATGCTTGCCTTATCGAAGATCATGCACCAACCCTCTTGTCCACTGCATCACATTGTAGTTTCTGCTTCTGCAAAATTGGGGGCTTCTACTTTTGCATCAATTGCGTTGGATCACATGAGTTGTGGGGGGCATACAGGTTCTTCTGGATCTGAGGCTTCTATATCGACAAAATGTTGTGACTTTGCGGAAGTGATTGATTTCATTGATGTCAGTCTACTGGAGAGACCACATTCATGTTATTCTGTTTTCCTCGATTTCTTGTACAAACATGGAGTTACGCAGTCAGTTTTGACGTTTGAAGCTATCACTCAATTGCTCTTCAAAGTCATTTTGACTCCCGCATCTCCCATGGATATTGATGTTGGGAACTCTACACAGTTTGAGAAGGGCATTCATCATGGAACAATCAACTGTTTCATCCATCTAAAGGAACTGATTGTTATGGCTCCAGGTGCCAGAGGTAATCAAATTCCAGGTGCTAGAGATGTTGGAAGTGAACGAGTTCGAAAGGCTATAGTGAGTGACAGTGAACTCAAGTTTGATGAAATCACACGAGGAGTGTATGTAACTATATGTGGAAGTGCTAATAGGTGCAACAGGGTGCATGAATATTTGAAGGAACGGATTTATTACATGGATATGGATTTGGAAGCAATTCGCGGGAAGCCCTTTCGACAGAAGCGTGAGGGGTATACAGTTTATGAAGTCCAGGATAGTAGCAACGGTCCATTGGCGCCCACAATAGACCAGTTGTTCTATGCCATTGGATCTGGTGCTGCGGCTGCACTTTCCACTTTCAGCAAGGAGAACATTCATGTTGGTATGACAGAAAAGGAAGGCATAGAGTGTGTAAAGCGCGCTTTGTTATGTTCTGCAACTACTGAACCTGGTTGTGGAGGAGAGATCAGAGTGTACTGTGTGAAAGGGAGAAGATATGACCTAGTGTTCCAAAAGCATGCTATGGAGATGGTTTTAGAGATGCCACAGGAGGGGTTCTTTGGTGGAGACAAGTTATTTTTCATCATCGAGAAAAGACGAAAAGAATTTACTCCTGAAGATCTGTGGCGACTTTTAAATGGGACCGCCGGTAATAGAATTAAACTAGTGCATTGCATAGTTGAAACCGGTGAATGGTTATTGTATCGGGCTTGTTTTGCATCAGAGACTAAGGCTAGACAGGCATACAATAGAGGAGAAGCGATTGACGGACTAGGTTCCCTTCGAAAAAGGCAGTTCCGGATCCGTCTACCTTTTGTGAACGTAATTTCATTGACTACATATGTGGGTTCTGCATCAGAGGAACTACTTAGGGAGACACTCAACATGAAGCAGGCACTCAACATGAAGCTACATGCCCACTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

DUF4414 DUF908 DUF913 HECT UBA

Protein Analysis

655

Amino Acids

73.31

Weight (kDa)

6.33

Isoelectric Point (pI)

40.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF908	PF06012	69 - 210	1.6e-10	Domain of Unknown Function (DUF908)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010629)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr7g0217641 RchiOBHm_Chr7g0217651
rosa_laevigata	RLG00000002410 RLG00000002411 RLG00000002452 RLG00000019774
rosa_multiflora	Rmu_sc0000379.1_g000014 Rmu_sc0001300.1_g000006 Rmu_sc0001300.1_g000007 Rmu_sc0002029.1_g000025
rosa_roxburghii	Rroxscaffold_3G00241370
rosa_rugosa	Rorug07G0170600 Rorug07G0170600
rosa_samantha	Rh7AG310700 Rh7AG310800 Rh7AG316100 Rh7BG302300 Rh7BG302400 Rh7CG329700 Rh7DG314900
rosa_wichuraiana	Rw7G026700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	347
Acc36I	ACCTGC	1 cut(s)	440
AccB1I	GGYRCC	2 cut(s)	1055, 1336
AccB7I	CCANNNNNTGG	1 cut(s)	313
AccI	GTMKAC	3 cut(s)	817, 1295, 1849
AccII	CGCG	2 cut(s)	1263, 1461
AccIII	TCCGGA	1 cut(s)	1839
AciI	CCGC	5 cut(s)	788, 942, 1263, 1382, 1686
AclWI	GGATC	5 cut(s)	720, 757, 1378, 1837, 1850
AcsI	RAATTY	2 cut(s)	1071, 1646
AcuI	CTGAAG	2 cut(s)	519, 1677
AcyI	GRCGYC	1 cut(s)	1337
AfaI	GTAC	7 cut(s)	127, 191, 241, 363, 443, 866, 1517
AfiI	CCNNNNNNNGG	6 cut(s)	58, 313, 1030, 1496, 1592, 1734
AgeI	ACCGGT	1 cut(s)	1727
AgsI	TTSAA	6 cut(s)	218, 482, 902, 925, 1219, 1724
AhlI	ACTAGT	1 cut(s)	1705
AjnI	CCWGG	4 cut(s)	1051, 1075, 1311, 1489
AluBI	AGCT	7 cut(s)	69, 142, 331, 439, 485, 905, 1951
AluI	AGCT	7 cut(s)	69, 142, 331, 439, 485, 905, 1951
Alw26I	GTCTC	5 cut(s)	60, 820, 1602, 1760, 1910
AlwI	GGATC	5 cut(s)	720, 757, 1378, 1837, 1850
Aor13HI	TCCGGA	1 cut(s)	1839
ApeKI	GCWGC	4 cut(s)	252, 255, 1379, 1385
ApoI	RAATTY	2 cut(s)	1071, 1646
AsiGI	ACCGGT	1 cut(s)	1727
Asp700I	GAANNNNTTC	4 cut(s)	149, 504, 1104, 1257
AspLEI	GCGC	3 cut(s)	1339, 1461, 1463
AspS9I	GGNCC	2 cut(s)	1328, 1683
AsuHPI	GGTGA	3 cut(s)	185, 414, 1742
AsuII	TTCGAA	2 cut(s)	1108, 1825
AvaII	GGWCC	2 cut(s)	1328, 1683
BamHI	GGATCC	1 cut(s)	1842
BanI	GGYRCC	2 cut(s)	1055, 1336
BauI	CACGAG	1 cut(s)	1155
BbvI	GCAGC	4 cut(s)	264, 267, 1366, 1372
BccI	CCATC	5 cut(s)	13, 571, 596, 1032, 1564
BcgI	CGANNNNNNTGC	2 cut(s)	607, 641
BciT130I	CCWGG	4 cut(s)	1053, 1077, 1313, 1491
BcoDI	GTCTC	5 cut(s)	60, 820, 1602, 1760, 1910
BcuI	ACTAGT	1 cut(s)	1705
BfaI	CTAG	6 cut(s)	486, 1083, 1544, 1706, 1776, 1814
BfmI	CTRYAG	2 cut(s)	355, 1116
BfoI	RGCGCY	1 cut(s)	1340
BfuAI	ACCTGC	1 cut(s)	440
BglII	AGATCT	3 cut(s)	301, 372, 1660
BisI	GCNGC	5 cut(s)	253, 256, 1380, 1383, 1386
BlsI	GCNGC	5 cut(s)	254, 257, 1381, 1384, 1387
Bme1390I	CCNGG	4 cut(s)	1053, 1077, 1313, 1491
Bme18I	GGWCC	2 cut(s)	1328, 1683
BmgT120I	GGNCC	2 cut(s)	1328, 1683
BmiI	GGNNCC	7 cut(s)	586, 1050, 1057, 1338, 1684, 1819, 1844
BmrFI	CCNGG	4 cut(s)	1053, 1077, 1313, 1491
BmsI	GCATC	7 cut(s)	481, 658, 707, 953, 1572, 1769, 1904
BpmI	CTGGAG	3 cut(s)	335, 842, 1035
Bpu14I	TTCGAA	2 cut(s)	1108, 1825
BpuEI	CTTGAG	1 cut(s)	1121
BsaHI	GRCGYC	1 cut(s)	1337
BsaI	GGTCTC	1 cut(s)	820
BsaJI	CCNNGG	1 cut(s)	951
BsaWI	WCCGGW	2 cut(s)	1727, 1839
BsaXI	ACNNNNNCTCC	2 cut(s)	1152, 1182
Bsc4I	CCNNNNNNNGG	6 cut(s)	58, 313, 1030, 1496, 1592, 1734
Bse118I	RCCGGY	2 cut(s)	1688, 1727
Bse1I	ACTGG	4 cut(s)	276, 318, 825, 1351
Bse3DI	GCAATG	2 cut(s)	265, 1711
BseAI	TCCGGA	1 cut(s)	1839
BseBI	CCWGG	4 cut(s)	1053, 1077, 1313, 1491
BseDI	CCNNGG	1 cut(s)	951
BseGI	GGATG	2 cut(s)	325, 1020
BseLI	CCNNNNNNNGG	6 cut(s)	58, 313, 1030, 1496, 1592, 1734
BseMI	GCAATG	2 cut(s)	265, 1711
BseMII	CTCAG	2 cut(s)	360, 744
BseNI	ACTGG	4 cut(s)	276, 318, 825, 1351
BsePI	GCGCGC	1 cut(s)	1459
BseRI	GAGGAG	4 cut(s)	260, 1173, 1515, 1809
BseXI	GCAGC	4 cut(s)	264, 267, 1366, 1372
BseYI	CCCAGC	1 cut(s)	69
BsgI	GTGCAG	1 cut(s)	1371
Bsh1236I	CGCG	2 cut(s)	1263, 1461
BshNI	GGYRCC	2 cut(s)	1055, 1336
BshTI	ACCGGT	1 cut(s)	1727
BsiSI	CCGG	3 cut(s)	1689, 1728, 1840
BslFI	GGGAC	2 cut(s)	351, 1696
BslI	CCNNNNNNNGG	6 cut(s)	58, 313, 1030, 1496, 1592, 1734
BsmAI	GTCTC	5 cut(s)	60, 820, 1602, 1760, 1910
BsmFI	GGGAC	2 cut(s)	351, 1696
BsmI	GAATGC	1 cut(s)	993
Bso31I	GGTCTC	1 cut(s)	820
Bsp119I	TTCGAA	2 cut(s)	1108, 1825
Bsp13I	TCCGGA	1 cut(s)	1839
Bsp1407I	TGTACA	2 cut(s)	441, 864
Bsp19I	CCATGG	1 cut(s)	951
BspACI	CCGC	5 cut(s)	788, 942, 1263, 1382, 1686
BspCNI	CTCAG	2 cut(s)	361, 745
BspEI	TCCGGA	1 cut(s)	1839
BspFNI	CGCG	2 cut(s)	1263, 1461
BspLI	GGNNCC	7 cut(s)	586, 1050, 1057, 1338, 1684, 1819, 1844
BspMI	ACCTGC	1 cut(s)	440
BspPI	GGATC	5 cut(s)	720, 757, 1378, 1837, 1850
BspQI	GCTCTTC	1 cut(s)	926
BspT104I	TTCGAA	2 cut(s)	1108, 1825
BspT107I	GGYRCC	2 cut(s)	1055, 1336
BspTNI	GGTCTC	1 cut(s)	820
BsrDI	GCAATG	2 cut(s)	265, 1711
BsrFI	RCCGGY	2 cut(s)	1688, 1727
BsrGI	TGTACA	2 cut(s)	441, 864
BsrI	ACTGG	4 cut(s)	276, 318, 825, 1351
BssAI	RCCGGY	2 cut(s)	1688, 1727
BssECI	CCNNGG	1 cut(s)	951
BssHII	GCGCGC	1 cut(s)	1459
BssNAI	GTATAC	1 cut(s)	1296
BssNI	GRCGYC	1 cut(s)	1337
BssSI	CACGAG	1 cut(s)	1155
BssT1I	CCWWGG	1 cut(s)	951
Bst1107I	GTATAC	1 cut(s)	1296
Bst2BI	CACGAG	1 cut(s)	1155
Bst2UI	CCWGG	4 cut(s)	1053, 1077, 1313, 1491
Bst4CI	ACNGT	8 cut(s)	342, 472, 981, 1016, 1130, 1300, 1328, 1520
Bst6I	CTCTTC	2 cut(s)	78, 926
BstACI	GRCGYC	1 cut(s)	1337
BstAPI	GCANNNNNTGC	1 cut(s)	704
BstAUI	TGTACA	2 cut(s)	441, 864
BstBI	TTCGAA	2 cut(s)	1108, 1825
BstC8I	GCNNGC	5 cut(s)	437, 609, 1461, 1560, 1935
BstDEI	CTNAG	4 cut(s)	369, 753, 1770, 1910
BstDSI	CCRYGG	1 cut(s)	951
BstF5I	GGATG	2 cut(s)	325, 1020
BstFNI	CGCG	2 cut(s)	1263, 1461
BstH2I	RGCGCY	1 cut(s)	1340
BstHHI	GCGC	3 cut(s)	1339, 1461, 1463
BstMAI	GTCTC	5 cut(s)	60, 820, 1602, 1760, 1910
BstMWI	GCNNNNNNNGC	7 cut(s)	75, 491, 704, 1055, 1385, 1757, 1781
BstNI	CCWGG	4 cut(s)	1053, 1077, 1313, 1491
BstNSI	RCATGY	3 cut(s)	298, 1562, 1958
BstSCI	CCNGG	4 cut(s)	1051, 1075, 1311, 1489
BstSFI	CTRYAG	2 cut(s)	355, 1116
BstUI	CGCG	2 cut(s)	1263, 1461
BstV1I	GCAGC	4 cut(s)	264, 267, 1366, 1372
BstX2I	RGATCY	6 cut(s)	301, 372, 749, 1370, 1660, 1842
BstYI	RGATCY	6 cut(s)	301, 372, 749, 1370, 1660, 1842
BstZ17I	GTATAC	1 cut(s)	1296
BtgI	CCRYGG	1 cut(s)	951
BtsCI	GGATG	2 cut(s)	325, 1020
BtsI	GCAGTG	1 cut(s)	644
BtsIMutI	CAGTG	2 cut(s)	644, 1135
BveI	ACCTGC	1 cut(s)	440
Cac8I	GCNNGC	5 cut(s)	437, 609, 1461, 1560, 1935
CfoI	GCGC	3 cut(s)	1339, 1461, 1463
Cfr10I	RCCGGY	2 cut(s)	1688, 1727
Cfr13I	GGNCC	2 cut(s)	1328, 1683
CsiI	ACCWGGT	1 cut(s)	1489
Csp6I	GTAC	7 cut(s)	126, 190, 240, 362, 442, 865, 1516
CspAI	ACCGGT	1 cut(s)	1727
CviQI	GTAC	7 cut(s)	126, 190, 240, 362, 442, 865, 1516
DdeI	CTNAG	4 cut(s)	369, 753, 1770, 1910
DinI	GGCGCC	1 cut(s)	1338
DraI	TTTAAA	2 cut(s)	327, 1677
Eam1104I	CTCTTC	2 cut(s)	78, 926
EarI	CTCTTC	2 cut(s)	78, 926
Eco130I	CCWWGG	1 cut(s)	951
Eco31I	GGTCTC	1 cut(s)	820
Eco47I	GGWCC	2 cut(s)	1328, 1683
Eco57I	CTGAAG	2 cut(s)	519, 1677
EcoRII	CCWGG	4 cut(s)	1051, 1075, 1311, 1489
EcoT14I	CCWWGG	1 cut(s)	951
EcoT22I	ATGCAT	1 cut(s)	6
EgeI	GGCGCC	1 cut(s)	1338
EheI	GGCGCC	1 cut(s)	1338
ErhI	CCWWGG	1 cut(s)	951
FaqI	GGGAC	2 cut(s)	351, 1696
FauI	CCCGC	2 cut(s)	949, 1256
FauNDI	CATATG	2 cut(s)	6, 1882
FblI	GTMKAC	3 cut(s)	817, 1295, 1849
Fnu4HI	GCNGC	5 cut(s)	253, 256, 1380, 1383, 1386
FokI	GGATG	2 cut(s)	332, 1007
Fsp4HI	GCNGC	5 cut(s)	253, 256, 1380, 1383, 1386
FspBI	CTAG	6 cut(s)	486, 1083, 1544, 1706, 1776, 1814
GlaI	GCGC	3 cut(s)	1338, 1460, 1462
GluI	GCNGC	5 cut(s)	253, 256, 1380, 1383, 1386
GsaI	CCCAGC	1 cut(s)	73
GsuI	CTGGAG	3 cut(s)	335, 842, 1035
HaeII	RGCGCY	1 cut(s)	1340
HapII	CCGG	3 cut(s)	1689, 1728, 1840
HhaI	GCGC	3 cut(s)	1339, 1461, 1463
Hin1I	GRCGYC	1 cut(s)	1337
Hin6I	GCGC	3 cut(s)	1337, 1459, 1461
HinP1I	GCGC	3 cut(s)	1337, 1459, 1461
HinfI	GANTC	4 cut(s)	32, 218, 396, 937
HpaII	CCGG	3 cut(s)	1689, 1728, 1840
HphI	GGTGA	3 cut(s)	185, 414, 1742
Hpy166II	GTNNAC	9 cut(s)	422, 644, 818, 1100, 1133, 1296, 1516, 1850, 1861
Hpy188I	TCNGA	8 cut(s)	390, 401, 568, 593, 754, 1511, 1765, 1900
Hpy188III	TCNNGA	7 cut(s)	368, 497, 582, 747, 1630, 1655, 1840
Hpy8I	GTNNAC	9 cut(s)	422, 644, 818, 1100, 1133, 1296, 1516, 1850, 1861
HpyAV	CCTTC	7 cut(s)	164, 424, 467, 982, 1213, 1433, 1832
HpyCH4III	ACNGT	8 cut(s)	342, 472, 981, 1016, 1130, 1300, 1328, 1520
HpyCH4IV	ACGT	2 cut(s)	896, 1863
HpyF10VI	GCNNNNNNNGC	7 cut(s)	75, 491, 704, 1055, 1385, 1757, 1781
HpyF3I	CTNAG	4 cut(s)	369, 753, 1770, 1910
HpySE526I	ACGT	2 cut(s)	896, 1863
Hsp92I	GRCGYC	1 cut(s)	1337
HspAI	GCGC	3 cut(s)	1337, 1459, 1461
KasI	GGCGCC	1 cut(s)	1336
Kpn2I	TCCGGA	1 cut(s)	1839
LguI	GCTCTTC	1 cut(s)	926
LmnI	GCTCC	2 cut(s)	499, 1054
Lsp1109I	GCAGC	4 cut(s)	264, 267, 1366, 1372
LweI	GCATC	7 cut(s)	481, 658, 707, 953, 1572, 1769, 1904
MabI	ACCWGGT	1 cut(s)	1489
MaeI	CTAG	6 cut(s)	486, 1083, 1544, 1706, 1776, 1814
MaeII	ACGT	2 cut(s)	896, 1863
MaeIII	GTNAC	5 cut(s)	278, 779, 877, 1124, 1168
MboII	GAAGA	8 cut(s)	95, 512, 581, 631, 735, 913, 1545, 1670
MfeI	CAATTG	2 cut(s)	702, 914
MflI	RGATCY	6 cut(s)	301, 372, 749, 1370, 1660, 1842
Mly113I	GGCGCC	1 cut(s)	1337
MlyI	GAGTC	1 cut(s)	931
MmeI	TCCRAC	2 cut(s)	690, 1072
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	1 cut(s)	1839
MroXI	GAANNNNTTC	4 cut(s)	149, 504, 1104, 1257
MseI	TTAA	3 cut(s)	326, 1676, 1701
MslI	CAYNNNNRTG	3 cut(s)	9, 835, 1241
MspI	CCGG	3 cut(s)	1689, 1728, 1840
MspR9I	CCNGG	4 cut(s)	1053, 1077, 1313, 1491
MunI	CAATTG	2 cut(s)	702, 914
Mva1269I	GAATGC	1 cut(s)	993
MvaI	CCWGG	4 cut(s)	1053, 1077, 1313, 1491
MvnI	CGCG	2 cut(s)	1263, 1461
MwoI	GCNNNNNNNGC	7 cut(s)	75, 491, 704, 1055, 1385, 1757, 1781
NarI	GGCGCC	1 cut(s)	1337
NcoI	CCATGG	1 cut(s)	951
NdeI	CATATG	2 cut(s)	6, 1882
NlaIV	GGNNCC	7 cut(s)	586, 1050, 1057, 1338, 1684, 1819, 1844
NmuCI	GTSAC	2 cut(s)	779, 1124
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	3 cut(s)	298, 1562, 1958
NspV	TTCGAA	2 cut(s)	1108, 1825
PaeI	GCATGC	1 cut(s)	1562
PauI	GCGCGC	1 cut(s)	1459
PciSI	GCTCTTC	1 cut(s)	926
PcsI	WCGNNNNNNNCGW	1 cut(s)	1282
PctI	GAATGC	1 cut(s)	993
PdmI	GAANNNNTTC	4 cut(s)	149, 504, 1104, 1257
PfeI	GAWTC	3 cut(s)	32, 218, 396
PflMI	CCANNNNNTGG	1 cut(s)	313
PfoI	TCCNGGA	1 cut(s)	1311
PinAI	ACCGGT	1 cut(s)	1727
PkrI	GCNGC	5 cut(s)	254, 257, 1381, 1384, 1387
PleI	GAGTC	1 cut(s)	931
PluTI	GGCGCC	1 cut(s)	1340
PpsI	GAGTC	1 cut(s)	931
PsiI	TTATAA	1 cut(s)	347
Psp6I	CCWGG	4 cut(s)	1051, 1075, 1311, 1489
PspFI	CCCAGC	1 cut(s)	69
PspGI	CCWGG	4 cut(s)	1051, 1075, 1311, 1489
PspN4I	GGNNCC	7 cut(s)	586, 1050, 1057, 1338, 1684, 1819, 1844
PspPI	GGNCC	2 cut(s)	1328, 1683
PsuI	RGATCY	6 cut(s)	301, 372, 749, 1370, 1660, 1842
PteI	GCGCGC	1 cut(s)	1459
RsaI	GTAC	7 cut(s)	127, 191, 241, 363, 443, 866, 1517
RsaNI	GTAC	7 cut(s)	126, 190, 240, 362, 442, 865, 1516
RseI	CAYNNNNRTG	3 cut(s)	9, 835, 1241
SapI	GCTCTTC	1 cut(s)	926
SaqAI	TTAA	3 cut(s)	326, 1676, 1701
SatI	GCNGC	5 cut(s)	253, 256, 1380, 1383, 1386
Sau96I	GGNCC	2 cut(s)	1328, 1683
SchI	GAGTC	1 cut(s)	931
ScrFI	CCNGG	4 cut(s)	1053, 1077, 1313, 1491
SexAI	ACCWGGT	1 cut(s)	1489
SfaNI	GCATC	7 cut(s)	481, 658, 707, 953, 1572, 1769, 1904
SfcI	CTRYAG	2 cut(s)	355, 1116
SfoI	GGCGCC	1 cut(s)	1338
SfuI	TTCGAA	2 cut(s)	1108, 1825
SinI	GGWCC	2 cut(s)	1328, 1683
SmiMI	CAYNNNNRTG	3 cut(s)	9, 835, 1241
SmlI	CTYRAG	1 cut(s)	1136
SmoI	CTYRAG	1 cut(s)	1136
SpeI	ACTAGT	1 cut(s)	1705
SphI	GCATGC	1 cut(s)	1562
SsiI	CCGC	5 cut(s)	788, 942, 1263, 1382, 1686
SspDI	GGCGCC	1 cut(s)	1336
SspI	AATATT	1 cut(s)	1214
SspMI	CTAG	6 cut(s)	486, 1083, 1544, 1706, 1776, 1814
StyD4I	CCNGG	4 cut(s)	1051, 1075, 1311, 1489
StyI	CCWWGG	1 cut(s)	951
TaaI	ACNGT	8 cut(s)	342, 472, 981, 1016, 1130, 1300, 1328, 1520
TaiI	ACGT	2 cut(s)	899, 1866
TaqI	TCGA	7 cut(s)	617, 767, 855, 1108, 1276, 1629, 1825
TatI	WGTACW	4 cut(s)	239, 441, 864, 1515
TauI	GCSGC	1 cut(s)	1385
TfiI	GAWTC	3 cut(s)	32, 218, 396
Tru1I	TTAA	3 cut(s)	326, 1676, 1701
Tru9I	TTAA	3 cut(s)	326, 1676, 1701
TscAI	CASTG	2 cut(s)	651, 1135
TseFI	GTSAC	2 cut(s)	779, 1124
TseI	GCWGC	4 cut(s)	252, 255, 1379, 1385
Tsp45I	GTSAC	2 cut(s)	779, 1124
TspGWI	ACGGA	4 cut(s)	297, 1240, 1824, 1835
TspRI	CASTG	2 cut(s)	651, 1135
Van91I	CCANNNNNTGG	1 cut(s)	313
VpaK11BI	GGWCC	2 cut(s)	1328, 1683
XapI	RAATTY	2 cut(s)	1071, 1646
XceI	RCATGY	3 cut(s)	298, 1562, 1958
XmiI	GTMKAC	3 cut(s)	817, 1295, 1849
XmnI	GAANNNNTTC	4 cut(s)	149, 504, 1104, 1257
XspI	CTAG	6 cut(s)	486, 1083, 1544, 1706, 1776, 1814
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.