Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0010629

Physical Location & Seq

Genomic Coordinates Forward (+)

36966261 .. 37015772

Gene Structure 49512 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG314900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGGCCAAAGGTTTCGGAGCTGTGCTACCAATTCATGAGATTCCAAGGGTTGCGCCTTGGGAGGGAGAACAAGGCAACCTACAAGTGCTACAAACTTTGATACAGACGATTATAGAGAATTTCCATAACAGGAGTTCATTTGATAGCTTACAGGAGCATTTCAAGCTGCTACTTGCATCAACAGATCTGAAGTTATCTCCTGTCTCTGGCAAAGAGCGCAAGGAAGAGGGGCTGGATTTATTTTCACTTGTCATGGCAAATGATAGTACCCAAGATGATGAGCTGAATATGTTCCCAACTGATGTAGGAGAAGGTGATTACAAATATCAGTACCAAATAGGTTCTACACCTTATTTTGAATCGCATGGGAATACCCAAAGTACAGAGGAGAGCAGCAGCAATGCAAATAATACTTCCAGTTACGGAGTTATACACATGCCAGATCTCCATTTACTGGAGGATGATTTAAAGCTTATGGGACAGTTTATAAAGGACTACAGAGTACCTCCTGAGATCTGGTTCTCACTTCTGACAAGAATCAGACATGCCCATGCCTTCTGTTCGCCAAGAACCTGCAAGCTGTACAGGAGGATATGCCTTCTTGCATTTACTGTGCTTGTTCAAGCTAGTGATGCTCCTGAAGAATTTCTGTCTTTCTTTGCTAATAAGCTAGACTATATTAGTAGATCAATTAGAATTGTGCCATCAGAAGAAGTAGTTTCTGGAACCATCAGAACAAATACAATGCTTACCTTATCGAAGATCATGCACCAACCCTCTTGTCCACTGCATCACATTGTAGTTTCTGCTTCTGCAAAACTGGGGGCTTCTACTTTTGCATCAATTGCGTTGGATCACATGAGTTATGGGGGGCATACAGTCTACTGGAGAGACCACATTCATGTAATTCCTGTTTTCCTCAATTTCTTGTACAGACATCGAGTTACCCAGTCAGTTTTGACGTTTGAAGCTATCACTCAGTTTGAGAAGGGCATTCATCATGGAACAATCAACTGTTTCATCCATCTAAAGGAACTGATTGTTATGGGTGTGGATTCGAGATCTAGGATTGTTGTAACTGATGCAAATAGAGCTCCAGGTGCCAGAGGTAATCAAATTCCAGGTGCTAGAGCTCCAGGTGCCAGAGGTAATCAAATTCCAGGTGCTAGAGCTCCAGATGTTGGAAGTGAACGAGTTCGAAAGGCTATAGTGAGTGACAGTGAACTCAAGTTTGATGAAATCACACGAGGCGTGTATGTAACTATATGTGGAAGTGCTAATAGGTGCGACAGGGTGCAGGAACATTTGAAGGAACGGATTTATTACGTGGATATGGATTTGGAAGCAATTCGCGCGGAAGCCCTTTCGTATATGTCAAAAAATCCTCTAAATCCACATGATGATAGTAGCAACGGTCCATTGGCGCCCACAATAGACCAGTTGTTCTATGCCATTGGATCTGGTGCTGCGGCTGCACTTTCCTCTTTCAGCAAGGATAACATTCATGTTGGTATGACAGAAAAGGAAGGTATAGAGTGTGTAAAGCGCGCTTTGTTATGTTCTGCAACTACTGAACCTGGTTGTGGAGGAGAGATCAGAGTGTACTGTGTGAAAGGGAGAATATATGACCTAGTGTTCCAAAAGCATGCTATGGAGATGCTTTTAGAGATGCCACAAGAGGGGTTCTTTGGTGGAGACAAGTTATTTTTCATCATCGAGAAAAGACGAAATGAATTTACTCCTGAAGATCTGTGGCGACTTTTAAATGGGACCGCCGGTAATAGAATTAAGCTAGTGCATTGCATAGCTGAAACCGGTCAATGGTTATTGTATCGGGCTTGTTTTGTATCAGAGACCAAGGCTAGACAGGCATACAATAGAGGAGAAGCGATTGACGGACTAGGTTCCCTTCGAAAAAGGCAGTTCCGGATCCGTCTACCTTTTGTGAACGTAATTTCATTGACTACATATGTCGGTTCTGCATCAGAGGAACTACTTAGGGAGACACTCAACATGAAGCAGGCACTCAACATGAAGCTACGTGCCCACTTTCTATTAGTTCCTGATTTGGTGAGTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

DUF4414 DUF908 DUF913 HECT UBA

Protein Analysis

693

Amino Acids

77.69

Weight (kDa)

6.69

Isoelectric Point (pI)

40.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF908	PF06012	120 - 257	2.5e-08	Domain of Unknown Function (DUF908)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010629)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr7g0217641 RchiOBHm_Chr7g0217651
rosa_laevigata	RLG00000002410 RLG00000002411 RLG00000002452 RLG00000019774
rosa_multiflora	Rmu_sc0000379.1_g000014 Rmu_sc0001300.1_g000006 Rmu_sc0001300.1_g000007 Rmu_sc0002029.1_g000025
rosa_roxburghii	Rroxscaffold_3G00241370
rosa_rugosa	Rorug07G0170600 Rorug07G0170600
rosa_samantha	Rh7AG310700 Rh7AG310800 Rh7AG316100 Rh7BG302300 Rh7BG302400 Rh7CG329700 Rh7DG314900
rosa_wichuraiana	Rw7G026700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	488
Acc36I	ACCTGC	1 cut(s)	581
AccB1I	GGYRCC	3 cut(s)	1100, 1139, 1423
AccB7I	CCANNNNNTGG	2 cut(s)	454, 1181
AccI	GTMKAC	2 cut(s)	882, 1936
AccII	CGCG	3 cut(s)	1353, 1355, 1548
AccIII	TCCGGA	1 cut(s)	1926
AciI	CCGC	3 cut(s)	1355, 1469, 1773
AclWI	GGATC	4 cut(s)	861, 1465, 1924, 1937
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	5 cut(s)	118, 644, 1116, 1155, 1733
AcuI	CTGAAG	3 cut(s)	209, 660, 1764
AcyI	GRCGYC	1 cut(s)	1424
AfaI	GTAC	7 cut(s)	268, 332, 382, 504, 584, 932, 1604
AfiI	CCNNNNNNNGG	8 cut(s)	62, 206, 454, 1030, 1181, 1583, 1679, 1821
AgeI	ACCGGT	1 cut(s)	1814
AgsI	TTSAA	5 cut(s)	163, 359, 623, 968, 1309
AjnI	CCWGG	5 cut(s)	1096, 1120, 1135, 1159, 1576
Alw21I	GWGCWC	3 cut(s)	1096, 1135, 1174
Alw26I	GTCTC	5 cut(s)	208, 885, 1689, 1847, 1997
AlwI	GGATC	4 cut(s)	861, 1465, 1924, 1937
Aor13HI	TCCGGA	1 cut(s)	1926
AoxI	GGCC	1 cut(s)	3
ApeKI	GCWGC	5 cut(s)	166, 393, 396, 1466, 1472
ApoI	RAATTY	5 cut(s)	118, 644, 1116, 1155, 1733
AsiGI	ACCGGT	1 cut(s)	1814
Asp700I	GAANNNNTTC	4 cut(s)	290, 645, 1194, 1347
AspLEI	GCGC	6 cut(s)	55, 219, 1355, 1426, 1548, 1550
AspS9I	GGNCC	2 cut(s)	1415, 1770
AsuHPI	GGTGA	1 cut(s)	326
AsuII	TTCGAA	2 cut(s)	1198, 1912
AvaII	GGWCC	2 cut(s)	1415, 1770
BaeGI	GKGCMC	1 cut(s)	2047
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	1929
BanI	GGYRCC	3 cut(s)	1100, 1139, 1423
BanII	GRGCYC	3 cut(s)	1096, 1135, 1174
BauI	CACGAG	1 cut(s)	1245
Bbv12I	GWGCWC	3 cut(s)	1096, 1135, 1174
BbvI	GCAGC	5 cut(s)	153, 405, 408, 1453, 1459
BccI	CCATC	3 cut(s)	712, 737, 1032
BcgI	CGANNNNNNTGC	2 cut(s)	748, 782
BciT130I	CCWGG	5 cut(s)	1098, 1122, 1137, 1161, 1578
BcoDI	GTCTC	5 cut(s)	208, 885, 1689, 1847, 1997
BfaI	CTAG	9 cut(s)	627, 671, 1065, 1128, 1167, 1631, 1793, 1863, 1901
BfmI	CTRYAG	2 cut(s)	496, 1206
BfoI	RGCGCY	1 cut(s)	1427
BfuAI	ACCTGC	1 cut(s)	581
BglII	AGATCT	5 cut(s)	184, 442, 513, 1061, 1747
BisI	GCNGC	6 cut(s)	167, 394, 397, 1467, 1470, 1473
BlsI	GCNGC	6 cut(s)	168, 395, 398, 1468, 1471, 1474
Bme1390I	CCNGG	5 cut(s)	1098, 1122, 1137, 1161, 1578
Bme18I	GGWCC	2 cut(s)	1415, 1770
BmgT120I	GGNCC	2 cut(s)	1415, 1770
BmiI	GGNNCC	7 cut(s)	727, 1102, 1141, 1425, 1771, 1906, 1931
BmrFI	CCNGG	5 cut(s)	1098, 1122, 1137, 1161, 1578
BmrI	ACTGGG	2 cut(s)	830, 943
BmsI	GCATC	8 cut(s)	185, 622, 799, 848, 1072, 1647, 1659, 1991
BmuI	ACTGGG	2 cut(s)	830, 943
BpmI	CTGGAG	5 cut(s)	476, 907, 1080, 1119, 1158
Bpu14I	TTCGAA	2 cut(s)	1198, 1912
BpuEI	CTTGAG	1 cut(s)	1211
BsaAI	YACGTR	2 cut(s)	1327, 2042
BsaHI	GRCGYC	1 cut(s)	1424
BsaI	GGTCTC	2 cut(s)	885, 1847
BsaJI	CCNNGG	3 cut(s)	44, 56, 1857
BsaWI	WCCGGW	2 cut(s)	1814, 1926
Bsc4I	CCNNNNNNNGG	8 cut(s)	62, 206, 454, 1030, 1181, 1583, 1679, 1821
Bse118I	RCCGGY	2 cut(s)	1775, 1814
Bse1I	ACTGG	6 cut(s)	417, 459, 825, 890, 949, 1438
Bse3DI	GCAATG	2 cut(s)	406, 1798
BseAI	TCCGGA	1 cut(s)	1926
BseBI	CCWGG	5 cut(s)	1098, 1122, 1137, 1161, 1578
BseDI	CCNNGG	3 cut(s)	44, 56, 1857
BseGI	GGATG	2 cut(s)	466, 1020
BseLI	CCNNNNNNNGG	8 cut(s)	62, 206, 454, 1030, 1181, 1583, 1679, 1821
BseMI	GCAATG	2 cut(s)	406, 1798
BseMII	CTCAG	2 cut(s)	501, 992
BseNI	ACTGG	6 cut(s)	417, 459, 825, 890, 949, 1438
BsePI	GCGCGC	1 cut(s)	1546
BseRI	GAGGAG	3 cut(s)	401, 1602, 1896
BseSI	GKGCMC	1 cut(s)	2047
BseXI	GCAGC	5 cut(s)	153, 405, 408, 1453, 1459
BsgI	GTGCAG	2 cut(s)	1316, 1458
Bsh1236I	CGCG	3 cut(s)	1353, 1355, 1548
BshFI	GGCC	1 cut(s)	5
BshNI	GGYRCC	3 cut(s)	1100, 1139, 1423
BshTI	ACCGGT	1 cut(s)	1814
BsiHKAI	GWGCWC	3 cut(s)	1096, 1135, 1174
BsiSI	CCGG	3 cut(s)	1776, 1815, 1927
BslFI	GGGAC	2 cut(s)	492, 1783
BslI	CCNNNNNNNGG	8 cut(s)	62, 206, 454, 1030, 1181, 1583, 1679, 1821
BsmAI	GTCTC	5 cut(s)	208, 885, 1689, 1847, 1997
BsmFI	GGGAC	2 cut(s)	492, 1783
BsmI	GAATGC	1 cut(s)	993
BsnI	GGCC	1 cut(s)	5
Bso31I	GGTCTC	2 cut(s)	885, 1847
Bsp119I	TTCGAA	2 cut(s)	1198, 1912
Bsp1286I	GDGCHC	4 cut(s)	1096, 1135, 1174, 2047
Bsp13I	TCCGGA	1 cut(s)	1926
Bsp1407I	TGTACA	2 cut(s)	582, 930
BspACI	CCGC	3 cut(s)	1355, 1469, 1773
BspANI	GGCC	1 cut(s)	5
BspCNI	CTCAG	2 cut(s)	502, 991
BspEI	TCCGGA	1 cut(s)	1926
BspFNI	CGCG	3 cut(s)	1353, 1355, 1548
BspHI	TCATGA	1 cut(s)	34
BspLI	GGNNCC	7 cut(s)	727, 1102, 1141, 1425, 1771, 1906, 1931
BspMI	ACCTGC	1 cut(s)	581
BspPI	GGATC	4 cut(s)	861, 1465, 1924, 1937
BspT104I	TTCGAA	2 cut(s)	1198, 1912
BspT107I	GGYRCC	3 cut(s)	1100, 1139, 1423
BspTNI	GGTCTC	2 cut(s)	885, 1847
BsrDI	GCAATG	2 cut(s)	406, 1798
BsrFI	RCCGGY	2 cut(s)	1775, 1814
BsrGI	TGTACA	2 cut(s)	582, 930
BsrI	ACTGG	6 cut(s)	417, 459, 825, 890, 949, 1438
BssAI	RCCGGY	2 cut(s)	1775, 1814
BssECI	CCNNGG	3 cut(s)	44, 56, 1857
BssHII	GCGCGC	1 cut(s)	1546
BssNI	GRCGYC	1 cut(s)	1424
BssSI	CACGAG	1 cut(s)	1245
BssT1I	CCWWGG	3 cut(s)	44, 56, 1857
Bst2BI	CACGAG	1 cut(s)	1245
Bst2UI	CCWGG	5 cut(s)	1098, 1122, 1137, 1161, 1578
Bst4CI	ACNGT	7 cut(s)	483, 613, 880, 1016, 1220, 1415, 1607
Bst6I	CTCTTC	1 cut(s)	219
BstACI	GRCGYC	1 cut(s)	1424
BstAPI	GCANNNNNTGC	1 cut(s)	845
BstAUI	TGTACA	2 cut(s)	582, 930
BstBAI	YACGTR	2 cut(s)	1327, 2042
BstBI	TTCGAA	2 cut(s)	1198, 1912
BstC8I	GCNNGC	4 cut(s)	578, 1548, 1647, 2022
BstDEI	CTNAG	3 cut(s)	510, 978, 1997
BstF5I	GGATG	2 cut(s)	466, 1020
BstFNI	CGCG	3 cut(s)	1353, 1355, 1548
BstH2I	RGCGCY	1 cut(s)	1427
BstHHI	GCGC	6 cut(s)	55, 219, 1355, 1426, 1548, 1550
BstMAI	GTCTC	5 cut(s)	208, 885, 1689, 1847, 1997
BstNI	CCWGG	5 cut(s)	1098, 1122, 1137, 1161, 1578
BstNSI	RCATGY	3 cut(s)	439, 548, 1649
BstSCI	CCNGG	5 cut(s)	1096, 1120, 1135, 1159, 1576
BstSFI	CTRYAG	2 cut(s)	496, 1206
BstSLI	GKGCMC	1 cut(s)	2047
BstUI	CGCG	3 cut(s)	1353, 1355, 1548
BstV1I	GCAGC	5 cut(s)	153, 405, 408, 1453, 1459
BstX2I	RGATCY	7 cut(s)	184, 442, 513, 1061, 1457, 1747, 1929
BstYI	RGATCY	7 cut(s)	184, 442, 513, 1061, 1457, 1747, 1929
BsuRI	GGCC	1 cut(s)	5
BtsCI	GGATG	2 cut(s)	466, 1020
BtsI	GCAGTG	1 cut(s)	785
BtsIMutI	CAGTG	2 cut(s)	785, 1225
BveI	ACCTGC	1 cut(s)	581
Cac8I	GCNNGC	4 cut(s)	578, 1548, 1647, 2022
CciI	TCATGA	1 cut(s)	34
CfoI	GCGC	6 cut(s)	55, 219, 1355, 1426, 1548, 1550
Cfr10I	RCCGGY	2 cut(s)	1775, 1814
Cfr13I	GGNCC	2 cut(s)	1415, 1770
CsiI	ACCWGGT	1 cut(s)	1576
Csp6I	GTAC	7 cut(s)	267, 331, 381, 503, 583, 931, 1603
CspAI	ACCGGT	1 cut(s)	1814
CviQI	GTAC	7 cut(s)	267, 331, 381, 503, 583, 931, 1603
DdeI	CTNAG	3 cut(s)	510, 978, 1997
DinI	GGCGCC	1 cut(s)	1425
DraI	TTTAAA	2 cut(s)	468, 1764
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	219
EarI	CTCTTC	1 cut(s)	219
Ecl136II	GAGCTC	3 cut(s)	1094, 1133, 1172
Eco130I	CCWWGG	3 cut(s)	44, 56, 1857
Eco24I	GRGCYC	3 cut(s)	1096, 1135, 1174
Eco31I	GGTCTC	2 cut(s)	885, 1847
Eco47I	GGWCC	2 cut(s)	1415, 1770
Eco53kI	GAGCTC	3 cut(s)	1094, 1133, 1172
Eco57I	CTGAAG	3 cut(s)	209, 660, 1764
EcoICRI	GAGCTC	3 cut(s)	1094, 1133, 1172
EcoRII	CCWGG	5 cut(s)	1096, 1120, 1135, 1159, 1576
EcoT14I	CCWWGG	3 cut(s)	44, 56, 1857
EcoT38I	GRGCYC	3 cut(s)	1096, 1135, 1174
EgeI	GGCGCC	1 cut(s)	1425
EheI	GGCGCC	1 cut(s)	1425
ErhI	CCWWGG	3 cut(s)	44, 56, 1857
FaqI	GGGAC	2 cut(s)	492, 1783
FauNDI	CATATG	1 cut(s)	1969
FblI	GTMKAC	2 cut(s)	882, 1936
Fnu4HI	GCNGC	6 cut(s)	167, 394, 397, 1467, 1470, 1473
FokI	GGATG	2 cut(s)	473, 1007
FriOI	GRGCYC	3 cut(s)	1096, 1135, 1174
Fsp4HI	GCNGC	6 cut(s)	167, 394, 397, 1467, 1470, 1473
FspBI	CTAG	9 cut(s)	627, 671, 1065, 1128, 1167, 1631, 1793, 1863, 1901
GlaI	GCGC	6 cut(s)	54, 218, 1354, 1425, 1547, 1549
GluI	GCNGC	6 cut(s)	167, 394, 397, 1467, 1470, 1473
GsuI	CTGGAG	5 cut(s)	476, 907, 1080, 1119, 1158
HaeII	RGCGCY	1 cut(s)	1427
HaeIII	GGCC	1 cut(s)	5
HapII	CCGG	3 cut(s)	1776, 1815, 1927
HhaI	GCGC	6 cut(s)	55, 219, 1355, 1426, 1548, 1550
Hin1I	GRCGYC	1 cut(s)	1424
Hin6I	GCGC	6 cut(s)	53, 217, 1353, 1424, 1546, 1548
HinP1I	GCGC	6 cut(s)	53, 217, 1353, 1424, 1546, 1548
HindIII	AAGCTT	1 cut(s)	470
HinfI	GANTC	4 cut(s)	40, 359, 537, 1055
HpaII	CCGG	3 cut(s)	1776, 1815, 1927
HphI	GGTGA	1 cut(s)	326
Hpy166II	GTNNAC	7 cut(s)	785, 883, 1190, 1223, 1603, 1937, 1948
Hpy188I	TCNGA	9 cut(s)	17, 189, 531, 542, 709, 734, 1598, 1852, 1987
Hpy8I	GTNNAC	7 cut(s)	785, 883, 1190, 1223, 1603, 1937, 1948
HpyAV	CCTTC	7 cut(s)	305, 565, 608, 982, 1303, 1520, 1919
HpyCH4III	ACNGT	7 cut(s)	483, 613, 880, 1016, 1220, 1415, 1607
HpyCH4IV	ACGT	4 cut(s)	962, 1326, 1950, 2041
HpyF3I	CTNAG	3 cut(s)	510, 978, 1997
HpySE526I	ACGT	4 cut(s)	962, 1326, 1950, 2041
Hsp92I	GRCGYC	1 cut(s)	1424
HspAI	GCGC	6 cut(s)	53, 217, 1353, 1424, 1546, 1548
KasI	GGCGCC	1 cut(s)	1423
Kpn2I	TCCGGA	1 cut(s)	1926
LmnI	GCTCC	6 cut(s)	17, 154, 640, 1099, 1138, 1177
Lsp1109I	GCAGC	5 cut(s)	153, 405, 408, 1453, 1459
LweI	GCATC	8 cut(s)	185, 622, 799, 848, 1072, 1647, 1659, 1991
MabI	ACCWGGT	1 cut(s)	1576
MaeI	CTAG	9 cut(s)	627, 671, 1065, 1128, 1167, 1631, 1793, 1863, 1901
MaeII	ACGT	4 cut(s)	962, 1326, 1950, 2041
MaeIII	GTNAC	5 cut(s)	419, 943, 1075, 1214, 1258
MboII	GAAGA	5 cut(s)	236, 653, 722, 772, 1757
MfeI	CAATTG	1 cut(s)	843
MflI	RGATCY	7 cut(s)	184, 442, 513, 1061, 1457, 1747, 1929
MhlI	GDGCHC	4 cut(s)	1096, 1135, 1174, 2047
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	1424
MmeI	TCCRAC	2 cut(s)	831, 1162
Mox20I	TGGCCA	1 cut(s)	5
MroI	TCCGGA	1 cut(s)	1926
MroXI	GAANNNNTTC	4 cut(s)	290, 645, 1194, 1347
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	467, 1763, 1788
MslI	CAYNNNNRTG	2 cut(s)	549, 900
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	3 cut(s)	1776, 1815, 1927
MspR9I	CCNGG	5 cut(s)	1098, 1122, 1137, 1161, 1578
MunI	CAATTG	1 cut(s)	843
Mva1269I	GAATGC	1 cut(s)	993
MvaI	CCWGG	5 cut(s)	1098, 1122, 1137, 1161, 1578
MvnI	CGCG	3 cut(s)	1353, 1355, 1548
NarI	GGCGCC	1 cut(s)	1424
NdeI	CATATG	1 cut(s)	1969
NlaIV	GGNNCC	7 cut(s)	727, 1102, 1141, 1425, 1771, 1906, 1931
NmuCI	GTSAC	1 cut(s)	1214
NspI	RCATGY	3 cut(s)	439, 548, 1649
NspV	TTCGAA	2 cut(s)	1198, 1912
PaeI	GCATGC	1 cut(s)	1649
PagI	TCATGA	1 cut(s)	34
PauI	GCGCGC	1 cut(s)	1546
PctI	GAATGC	1 cut(s)	993
PdmI	GAANNNNTTC	4 cut(s)	290, 645, 1194, 1347
PfeI	GAWTC	4 cut(s)	40, 359, 537, 1055
PflMI	CCANNNNNTGG	2 cut(s)	454, 1181
PinAI	ACCGGT	1 cut(s)	1814
PkrI	GCNGC	6 cut(s)	168, 395, 398, 1468, 1471, 1474
PluTI	GGCGCC	1 cut(s)	1427
Ppu21I	YACGTR	2 cut(s)	1327, 2042
PsiI	TTATAA	1 cut(s)	488
Psp124BI	GAGCTC	3 cut(s)	1096, 1135, 1174
Psp6I	CCWGG	5 cut(s)	1096, 1120, 1135, 1159, 1576
PspGI	CCWGG	5 cut(s)	1096, 1120, 1135, 1159, 1576
PspN4I	GGNNCC	7 cut(s)	727, 1102, 1141, 1425, 1771, 1906, 1931
PspPI	GGNCC	2 cut(s)	1415, 1770
PsuI	RGATCY	7 cut(s)	184, 442, 513, 1061, 1457, 1747, 1929
PteI	GCGCGC	1 cut(s)	1546
RsaI	GTAC	7 cut(s)	268, 332, 382, 504, 584, 932, 1604
RsaNI	GTAC	7 cut(s)	267, 331, 381, 503, 583, 931, 1603
RseI	CAYNNNNRTG	2 cut(s)	549, 900
SacI	GAGCTC	3 cut(s)	1096, 1135, 1174
SaqAI	TTAA	3 cut(s)	467, 1763, 1788
SatI	GCNGC	6 cut(s)	167, 394, 397, 1467, 1470, 1473
Sau96I	GGNCC	2 cut(s)	1415, 1770
ScrFI	CCNGG	5 cut(s)	1098, 1122, 1137, 1161, 1578
SduI	GDGCHC	4 cut(s)	1096, 1135, 1174, 2047
SexAI	ACCWGGT	1 cut(s)	1576
SfaNI	GCATC	8 cut(s)	185, 622, 799, 848, 1072, 1647, 1659, 1991
SfcI	CTRYAG	2 cut(s)	496, 1206
SfoI	GGCGCC	1 cut(s)	1425
SfuI	TTCGAA	2 cut(s)	1198, 1912
SinI	GGWCC	2 cut(s)	1415, 1770
SmiMI	CAYNNNNRTG	2 cut(s)	549, 900
SmlI	CTYRAG	1 cut(s)	1226
SmoI	CTYRAG	1 cut(s)	1226
SphI	GCATGC	1 cut(s)	1649
SsiI	CCGC	3 cut(s)	1355, 1469, 1773
SspDI	GGCGCC	1 cut(s)	1423
SspMI	CTAG	9 cut(s)	627, 671, 1065, 1128, 1167, 1631, 1793, 1863, 1901
SstI	GAGCTC	3 cut(s)	1096, 1135, 1174
StyD4I	CCNGG	5 cut(s)	1096, 1120, 1135, 1159, 1576
StyI	CCWWGG	3 cut(s)	44, 56, 1857
TaaI	ACNGT	7 cut(s)	483, 613, 880, 1016, 1220, 1415, 1607
TaiI	ACGT	4 cut(s)	965, 1329, 1953, 2044
TaqI	TCGA	6 cut(s)	758, 940, 1058, 1198, 1716, 1912
TatI	WGTACW	4 cut(s)	380, 582, 930, 1602
TauI	GCSGC	1 cut(s)	1472
TfiI	GAWTC	4 cut(s)	40, 359, 537, 1055
Tru1I	TTAA	3 cut(s)	467, 1763, 1788
Tru9I	TTAA	3 cut(s)	467, 1763, 1788
TscAI	CASTG	2 cut(s)	792, 1225
TseFI	GTSAC	1 cut(s)	1214
TseI	GCWGC	5 cut(s)	166, 393, 396, 1466, 1472
Tsp45I	GTSAC	1 cut(s)	1214
TspGWI	ACGGA	4 cut(s)	438, 1330, 1911, 1922
TspRI	CASTG	2 cut(s)	792, 1225
Van91I	CCANNNNNTGG	2 cut(s)	454, 1181
VpaK11BI	GGWCC	2 cut(s)	1415, 1770
XapI	RAATTY	5 cut(s)	118, 644, 1116, 1155, 1733
XceI	RCATGY	3 cut(s)	439, 548, 1649
XmiI	GTMKAC	2 cut(s)	882, 1936
XmnI	GAANNNNTTC	4 cut(s)	290, 645, 1194, 1347
XspI	CTAG	9 cut(s)	627, 671, 1065, 1128, 1167, 1631, 1793, 1863, 1901

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.