Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0010629

Physical Location & Seq

Genomic Coordinates Forward (+)

35553767 .. 35558687

Gene Structure 4921 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG316100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGCATATGAGTGGAAAGATGGTTTGTTTTGATTCTGTAAATAGTTATCTCCTGTCTCTGGCAAAGAGCTCGGGAAGCAAGGAAGAGGGGCTGGATTTATTTTCACTTGTCATGGCAAATGATAGTACCCAAGATGATGAGCTGAATATGTTCCCAACTGATGTAGGAGAAGGTGATTACAAATATCAGTACCAAATAGGTTCTACACCTTATTTTGAATCGCATGGGAATACCCAAAGTACAGAGGAGAGCAGCAGCAATGCAAATAATACTTCCAGTTACGGAGTTATACACATGCCAGATCTCCATTTACTGGAGGATGATTTAAAGCTCATGGGACAGTTTATAAAGGACTACAGAGTACCTCCTGAGATCTGGTTCTCACTTCTGACAAGAATCAGATATGCCCATGCCTTCTGTTCACCAAGAACCTGCAAGCTGTACAGGAGGATTTGCCTTCTTGCATTTACTGTGCTTGTTCAAGCTAGTGATGCTCCTGAAGAACTTCTGTCTTTCTTTGCTAATAAGCCAGACTATATTAGAAGATCAATTAGAATTGTGCCATCAGAAGAAGTAGTTTCTGGAACCATCAGAACAAATACAATGCTTGCCTTATCGAAGATCATGCACCAACCCTCTTGTCCACTGCATCACATTGTAGTTTCTGCTTCTGCAAAATTGGGGTCTTCTACTTTTGCATCAATTGCGTTGGATCACATGAGTTATGGGGGGCATACAGGTTCTTCTGGATCTGAGGCTTCTATATCGACAAAATGTTGTGACTTTGCGGAAGTGATTGATTTCATTGATGTCAGTCTACTGGAGAGACCACATTCATGTAATTCTGTTTTCCTCGATTTCTTGTACAGACATGGAGTTACCCAGTCAGTTTTGACGTTTGAAGCTATCACTCAATTGCTCTTCAAAGTCATTTTGACTCCCGCATCTCCCATGGATATTGATGTTGGGAACTCAAAGCAGGATGAAAGAGAAGATACTGACCATTCATCGATTTATGGTCCTTTAGCTAGCTATGGCAAACGTCTAAACCACCTGGTAACATCATCTTTCATACTATCAATCGACAATGCTGCTGTTATCAAGGAGTTTATTATGAAGTTAAAAAAATGTGACCAGCTGCGACAGGCCTTCAAGATGAACCCTACACAGTTTGAGAAGGGCATTCATCATGGAACAATCAACTGTTTCATCCATCTAAAGGAACTGATTGTTATGGGTGTGGATTCGAGATCTAGGATTGTTGTAACTGATGCAAATAGAGCTCCAGGTGCCAGAGGTAATCAAATTCCAGGTGCTAGAGCTCCAGGTGCCAGAGGTAATCAAATTCCAGGTGCTAGAGCTCCAGATGTTGGAAGTGAACGAGTTCGAAAGGCTATAGTGAGTGACAGTGAACTCAAGTTTGATGAAATCACACGAGGCGTGTATGTAACTATATGTGGAAGTGCTAATAGGTGCGACAGGGTGCAGGAACATTTGAAGGAACAGATTTATTACGTGGATATGGATTTGGAAGCAATTCGCGGGGAAGCCCTTTCGTATATGTCAAAAAATCCTCTAAATCCACATGATGTGGGAGCTGCATTTTTCCTTGTAGGACAGAAGCGTGAGGGGTATACAGTTTATGAAGTCCAGGATAGTAGCAACGGTCCATTGGCGCCCACAATAGACCAGTTGTTCTATGCCATTGGATCTGGTGCTGCAGCTGCACTTTCCTCTTTCAGCAAAATAAGTCATAGTGAGACATATTTGGGTGCATCGTTGGGGAAAAATCCTGAAACATTCTGGAAACACTTGATTCAGTTTGCCGTTCGAAATTCAGGCACAATATGGGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

DUF4414 DUF908 DUF913 HECT UBA

Protein Analysis

618

Amino Acids

68.37

Weight (kDa)

6.03

Isoelectric Point (pI)

35.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF908	PF06012	73 - 210	5.2e-10	Domain of Unknown Function (DUF908)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0010629)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr7g0217641 RchiOBHm_Chr7g0217651
rosa_laevigata	RLG00000002410 RLG00000002411 RLG00000002452 RLG00000019774
rosa_multiflora	Rmu_sc0000379.1_g000014 Rmu_sc0001300.1_g000006 Rmu_sc0001300.1_g000007 Rmu_sc0002029.1_g000025
rosa_roxburghii	Rroxscaffold_3G00241370
rosa_rugosa	Rorug07G0170600 Rorug07G0170600
rosa_samantha	Rh7AG310700 Rh7AG310800 Rh7AG316100 Rh7BG302300 Rh7BG302400 Rh7CG329700 Rh7DG314900
rosa_wichuraiana	Rw7G026700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	347
Acc36I	ACCTGC	1 cut(s)	440
AccB1I	GGYRCC	3 cut(s)	1289, 1328, 1675
AccB7I	CCANNNNNTGG	2 cut(s)	313, 1370
AccI	GTMKAC	2 cut(s)	817, 1634
AccII	CGCG	1 cut(s)	1542
AciI	CCGC	3 cut(s)	788, 942, 1542
AclWI	GGATC	3 cut(s)	720, 757, 1717
AcsI	RAATTY	3 cut(s)	1305, 1344, 1834
AcuI	CTGAAG	1 cut(s)	519
AcyI	GRCGYC	1 cut(s)	1676
AfaI	GTAC	6 cut(s)	127, 191, 241, 363, 443, 866
AfiI	CCNNNNNNNGG	4 cut(s)	58, 313, 1219, 1370
AgsI	TTSAA	6 cut(s)	218, 482, 902, 925, 1153, 1498
AjnI	CCWGG	6 cut(s)	1053, 1285, 1309, 1324, 1348, 1650
Alw21I	GWGCWC	4 cut(s)	71, 1285, 1324, 1363
Alw26I	GTCTC	3 cut(s)	60, 820, 1754
AlwI	GGATC	3 cut(s)	720, 757, 1717
Ama87I	CYCGRG	1 cut(s)	70
AoxI	GGCC	1 cut(s)	1146
ApeKI	GCWGC	8 cut(s)	252, 255, 1091, 1138, 1598, 1718, 1721, 1724
ApoI	RAATTY	3 cut(s)	1305, 1344, 1834
ArsI	GACNNNNNNTTYG	2 cut(s)	668, 700
Asp700I	GAANNNNTTC	4 cut(s)	149, 504, 1383, 1536
AspLEI	GCGC	1 cut(s)	1678
AspS9I	GGNCC	2 cut(s)	1019, 1667
AsuHPI	GGTGA	2 cut(s)	185, 414
AsuII	TTCGAA	2 cut(s)	1387, 1831
AsuNHI	GCTAGC	1 cut(s)	1028
AvaI	CYCGRG	1 cut(s)	70
AvaII	GGWCC	2 cut(s)	1019, 1667
BanI	GGYRCC	3 cut(s)	1289, 1328, 1675
BanII	GRGCYC	4 cut(s)	71, 1285, 1324, 1363
BauI	CACGAG	1 cut(s)	1434
BbsI	GAAGAC	1 cut(s)	678
Bbv12I	GWGCWC	4 cut(s)	71, 1285, 1324, 1363
BbvI	GCAGC	8 cut(s)	264, 267, 1078, 1125, 1585, 1705, 1711, 1733
BccI	CCATC	4 cut(s)	13, 571, 596, 1221
BceAI	ACGGC	1 cut(s)	1811
BcgI	CGANNNNNNTGC	6 cut(s)	51, 85, 607, 641, 1073, 1107
BciT130I	CCWGG	6 cut(s)	1055, 1287, 1311, 1326, 1350, 1652
BcoDI	GTCTC	3 cut(s)	60, 820, 1754
BfaI	CTAG	5 cut(s)	486, 1029, 1254, 1317, 1356
BfmI	CTRYAG	3 cut(s)	355, 1395, 1719
BfoI	RGCGCY	1 cut(s)	1679
BfuAI	ACCTGC	1 cut(s)	440
BglII	AGATCT	3 cut(s)	301, 372, 1250
BisI	GCNGC	8 cut(s)	253, 256, 1092, 1139, 1599, 1719, 1722, 1725
BlsI	GCNGC	8 cut(s)	254, 257, 1093, 1140, 1600, 1720, 1723, 1726
Bme1390I	CCNGG	6 cut(s)	1055, 1287, 1311, 1326, 1350, 1652
Bme18I	GGWCC	2 cut(s)	1019, 1667
BmeT110I	CYCGRG	1 cut(s)	70
BmgT120I	GGNCC	2 cut(s)	1019, 1667
BmiI	GGNNCC	4 cut(s)	586, 1291, 1330, 1677
BmrFI	CCNGG	6 cut(s)	1055, 1287, 1311, 1326, 1350, 1652
BmrI	ACTGGG	1 cut(s)	877
BmsI	GCATC	6 cut(s)	481, 658, 707, 953, 1261, 1784
BmtI	GCTAGC	1 cut(s)	1032
BmuI	ACTGGG	1 cut(s)	877
BpiI	GAAGAC	1 cut(s)	678
BpmI	CTGGAG	5 cut(s)	335, 842, 1269, 1308, 1347
Bpu14I	TTCGAA	2 cut(s)	1387, 1831
BpuEI	CTTGAG	1 cut(s)	1400
Bsa29I	ATCGAT	1 cut(s)	1010
BsaAI	YACGTR	1 cut(s)	1516
BsaHI	GRCGYC	1 cut(s)	1676
BsaI	GGTCTC	1 cut(s)	820
BsaJI	CCNNGG	1 cut(s)	951
Bsc4I	CCNNNNNNNGG	4 cut(s)	58, 313, 1219, 1370
Bse1I	ACTGG	5 cut(s)	276, 318, 825, 883, 1690
Bse3DI	GCAATG	1 cut(s)	265
BseBI	CCWGG	6 cut(s)	1055, 1287, 1311, 1326, 1350, 1652
BseCI	ATCGAT	1 cut(s)	1010
BseDI	CCNNGG	1 cut(s)	951
BseGI	GGATG	3 cut(s)	325, 988, 1209
BseLI	CCNNNNNNNGG	4 cut(s)	58, 313, 1219, 1370
BseMI	GCAATG	1 cut(s)	265
BseMII	CTCAG	2 cut(s)	360, 744
BseNI	ACTGG	5 cut(s)	276, 318, 825, 883, 1690
BseRI	GAGGAG	1 cut(s)	260
BseXI	GCAGC	8 cut(s)	264, 267, 1078, 1125, 1585, 1705, 1711, 1733
BsgI	GTGCAG	2 cut(s)	1505, 1710
Bsh1236I	CGCG	1 cut(s)	1542
BshFI	GGCC	1 cut(s)	1148
BshNI	GGYRCC	3 cut(s)	1289, 1328, 1675
BshVI	ATCGAT	1 cut(s)	1010
BsiHKAI	GWGCWC	4 cut(s)	71, 1285, 1324, 1363
BsiHKCI	CYCGRG	1 cut(s)	70
BslFI	GGGAC	1 cut(s)	351
BslI	CCNNNNNNNGG	4 cut(s)	58, 313, 1219, 1370
BsmAI	GTCTC	3 cut(s)	60, 820, 1754
BsmFI	GGGAC	1 cut(s)	351
BsmI	GAATGC	1 cut(s)	1182
BsnI	GGCC	1 cut(s)	1148
Bso31I	GGTCTC	1 cut(s)	820
BsoBI	CYCGRG	1 cut(s)	70
Bsp119I	TTCGAA	2 cut(s)	1387, 1831
Bsp1286I	GDGCHC	4 cut(s)	71, 1285, 1324, 1363
Bsp1407I	TGTACA	2 cut(s)	441, 864
Bsp143I	GATC	8 cut(s)	301, 372, 545, 621, 712, 749, 1250, 1709
Bsp19I	CCATGG	1 cut(s)	951
BspACI	CCGC	3 cut(s)	788, 942, 1542
BspANI	GGCC	1 cut(s)	1148
BspCNI	CTCAG	2 cut(s)	361, 745
BspDI	ATCGAT	1 cut(s)	1010
BspFNI	CGCG	1 cut(s)	1542
BspLI	GGNNCC	4 cut(s)	586, 1291, 1330, 1677
BspMAI	CTGCAG	1 cut(s)	1723
BspMI	ACCTGC	1 cut(s)	440
BspOI	GCTAGC	1 cut(s)	1032
BspPI	GGATC	3 cut(s)	720, 757, 1717
BspQI	GCTCTTC	1 cut(s)	926
BspT104I	TTCGAA	2 cut(s)	1387, 1831
BspT107I	GGYRCC	3 cut(s)	1289, 1328, 1675
BspTNI	GGTCTC	1 cut(s)	820
BsrDI	GCAATG	1 cut(s)	265
BsrGI	TGTACA	2 cut(s)	441, 864
BsrI	ACTGG	5 cut(s)	276, 318, 825, 883, 1690
BssECI	CCNNGG	1 cut(s)	951
BssMI	GATC	8 cut(s)	301, 372, 545, 621, 712, 749, 1250, 1709
BssNAI	GTATAC	1 cut(s)	1635
BssNI	GRCGYC	1 cut(s)	1676
BssSI	CACGAG	1 cut(s)	1434
BssT1I	CCWWGG	1 cut(s)	951
Bst1107I	GTATAC	1 cut(s)	1635
Bst2BI	CACGAG	1 cut(s)	1434
Bst2UI	CCWGG	6 cut(s)	1055, 1287, 1311, 1326, 1350, 1652
Bst4CI	ACNGT	7 cut(s)	342, 472, 1170, 1205, 1409, 1639, 1667
Bst6I	CTCTTC	2 cut(s)	78, 926
BstACI	GRCGYC	1 cut(s)	1676
BstAPI	GCANNNNNTGC	1 cut(s)	704
BstAUI	TGTACA	2 cut(s)	441, 864
BstBAI	YACGTR	1 cut(s)	1516
BstBI	TTCGAA	2 cut(s)	1387, 1831
BstC8I	GCNNGC	3 cut(s)	437, 609, 1030
BstDEI	CTNAG	2 cut(s)	369, 753
BstDSI	CCRYGG	1 cut(s)	951
BstF5I	GGATG	3 cut(s)	325, 988, 1209
BstFNI	CGCG	1 cut(s)	1542
BstH2I	RGCGCY	1 cut(s)	1679
BstHHI	GCGC	1 cut(s)	1678
BstKTI	GATC	8 cut(s)	304, 375, 548, 624, 715, 752, 1253, 1712
BstMAI	GTCTC	3 cut(s)	60, 820, 1754
BstMBI	GATC	8 cut(s)	301, 372, 545, 621, 712, 749, 1250, 1709
BstMWI	GCNNNNNNNGC	7 cut(s)	75, 491, 704, 1280, 1289, 1328, 1724
BstNI	CCWGG	6 cut(s)	1055, 1287, 1311, 1326, 1350, 1652
BstNSI	RCATGY	1 cut(s)	298
BstSCI	CCNGG	6 cut(s)	1053, 1285, 1309, 1324, 1348, 1650
BstSFI	CTRYAG	3 cut(s)	355, 1395, 1719
BstUI	CGCG	1 cut(s)	1542
BstV1I	GCAGC	8 cut(s)	264, 267, 1078, 1125, 1585, 1705, 1711, 1733
BstV2I	GAAGAC	1 cut(s)	678
BstX2I	RGATCY	5 cut(s)	301, 372, 749, 1250, 1709
BstYI	RGATCY	5 cut(s)	301, 372, 749, 1250, 1709
BstZ17I	GTATAC	1 cut(s)	1635
Bsu15I	ATCGAT	1 cut(s)	1010
BsuRI	GGCC	1 cut(s)	1148
BsuTUI	ATCGAT	1 cut(s)	1010
BtgI	CCRYGG	1 cut(s)	951
BtsCI	GGATG	3 cut(s)	325, 988, 1209
BtsI	GCAGTG	1 cut(s)	644
BtsIMutI	CAGTG	2 cut(s)	644, 1414
BveI	ACCTGC	1 cut(s)	440
Cac8I	GCNNGC	3 cut(s)	437, 609, 1030
CfoI	GCGC	1 cut(s)	1678
Cfr13I	GGNCC	2 cut(s)	1019, 1667
ClaI	ATCGAT	1 cut(s)	1010
CsiI	ACCWGGT	1 cut(s)	1053
Csp6I	GTAC	6 cut(s)	126, 190, 240, 362, 442, 865
CviQI	GTAC	6 cut(s)	126, 190, 240, 362, 442, 865
DdeI	CTNAG	2 cut(s)	369, 753
DinI	GGCGCC	1 cut(s)	1677
DpnI	GATC	8 cut(s)	303, 374, 547, 623, 714, 751, 1252, 1711
DpnII	GATC	8 cut(s)	301, 372, 545, 621, 712, 749, 1250, 1709
DraI	TTTAAA	1 cut(s)	327
Eam1104I	CTCTTC	2 cut(s)	78, 926
EarI	CTCTTC	2 cut(s)	78, 926
Ecl136II	GAGCTC	4 cut(s)	69, 1283, 1322, 1361
Eco130I	CCWWGG	1 cut(s)	951
Eco147I	AGGCCT	1 cut(s)	1148
Eco24I	GRGCYC	4 cut(s)	71, 1285, 1324, 1363
Eco31I	GGTCTC	1 cut(s)	820
Eco47I	GGWCC	2 cut(s)	1019, 1667
Eco53kI	GAGCTC	4 cut(s)	69, 1283, 1322, 1361
Eco57I	CTGAAG	1 cut(s)	519
Eco88I	CYCGRG	1 cut(s)	70
EcoICRI	GAGCTC	4 cut(s)	69, 1283, 1322, 1361
EcoRII	CCWGG	6 cut(s)	1053, 1285, 1309, 1324, 1348, 1650
EcoT14I	CCWWGG	1 cut(s)	951
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	4 cut(s)	71, 1285, 1324, 1363
EgeI	GGCGCC	1 cut(s)	1677
EheI	GGCGCC	1 cut(s)	1677
ErhI	CCWWGG	1 cut(s)	951
FaqI	GGGAC	1 cut(s)	351
FauI	CCCGC	2 cut(s)	949, 1535
FauNDI	CATATG	1 cut(s)	6
FblI	GTMKAC	2 cut(s)	817, 1634
Fnu4HI	GCNGC	8 cut(s)	253, 256, 1092, 1139, 1599, 1719, 1722, 1725
FokI	GGATG	3 cut(s)	332, 995, 1196
FriOI	GRGCYC	4 cut(s)	71, 1285, 1324, 1363
Fsp4HI	GCNGC	8 cut(s)	253, 256, 1092, 1139, 1599, 1719, 1722, 1725
FspBI	CTAG	5 cut(s)	486, 1029, 1254, 1317, 1356
GlaI	GCGC	1 cut(s)	1677
GluI	GCNGC	8 cut(s)	253, 256, 1092, 1139, 1599, 1719, 1722, 1725
GsuI	CTGGAG	5 cut(s)	335, 842, 1269, 1308, 1347
HaeII	RGCGCY	1 cut(s)	1679
HaeIII	GGCC	1 cut(s)	1148
HhaI	GCGC	1 cut(s)	1678
Hin1I	GRCGYC	1 cut(s)	1676
Hin6I	GCGC	1 cut(s)	1676
HinP1I	GCGC	1 cut(s)	1676
HinfI	GANTC	6 cut(s)	32, 218, 396, 937, 1244, 1816
HphI	GGTGA	2 cut(s)	185, 414
Hpy166II	GTNNAC	6 cut(s)	422, 644, 818, 1379, 1412, 1635
Hpy188I	TCNGA	5 cut(s)	390, 401, 568, 593, 754
Hpy8I	GTNNAC	6 cut(s)	422, 644, 818, 1379, 1412, 1635
HpyAV	CCTTC	6 cut(s)	164, 424, 467, 1159, 1171, 1492
HpyCH4III	ACNGT	7 cut(s)	342, 472, 1170, 1205, 1409, 1639, 1667
HpyCH4IV	ACGT	3 cut(s)	896, 1042, 1515
HpyF10VI	GCNNNNNNNGC	7 cut(s)	75, 491, 704, 1280, 1289, 1328, 1724
HpyF3I	CTNAG	2 cut(s)	369, 753
HpySE526I	ACGT	3 cut(s)	896, 1042, 1515
Hsp92I	GRCGYC	1 cut(s)	1676
HspAI	GCGC	1 cut(s)	1676
KasI	GGCGCC	1 cut(s)	1675
Kzo9I	GATC	8 cut(s)	301, 372, 545, 621, 712, 749, 1250, 1709
LguI	GCTCTTC	1 cut(s)	926
LmnI	GCTCC	5 cut(s)	499, 1288, 1327, 1366, 1595
Lsp1109I	GCAGC	8 cut(s)	264, 267, 1078, 1125, 1585, 1705, 1711, 1733
LweI	GCATC	6 cut(s)	481, 658, 707, 953, 1261, 1784
MabI	ACCWGGT	1 cut(s)	1053
MaeI	CTAG	5 cut(s)	486, 1029, 1254, 1317, 1356
MaeII	ACGT	3 cut(s)	896, 1042, 1515
MaeIII	GTNAC	8 cut(s)	278, 779, 877, 1057, 1130, 1264, 1403, 1447
MalI	GATC	8 cut(s)	303, 374, 547, 623, 714, 751, 1252, 1711
MboI	GATC	8 cut(s)	301, 372, 545, 621, 712, 749, 1250, 1709
MboII	GAAGA	9 cut(s)	95, 512, 555, 581, 631, 678, 735, 913, 1004
MfeI	CAATTG	2 cut(s)	702, 914
MflI	RGATCY	5 cut(s)	301, 372, 749, 1250, 1709
MhlI	GDGCHC	4 cut(s)	71, 1285, 1324, 1363
Mly113I	GGCGCC	1 cut(s)	1676
MlyI	GAGTC	1 cut(s)	931
MmeI	TCCRAC	2 cut(s)	690, 1351
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	4 cut(s)	149, 504, 1383, 1536
MseI	TTAA	3 cut(s)	326, 1121, 1855
MslI	CAYNNNNRTG	2 cut(s)	9, 835
MspA1I	CMGCKG	2 cut(s)	1138, 1724
MspR9I	CCNGG	6 cut(s)	1055, 1287, 1311, 1326, 1350, 1652
MunI	CAATTG	2 cut(s)	702, 914
Mva1269I	GAATGC	1 cut(s)	1182
MvaI	CCWGG	6 cut(s)	1055, 1287, 1311, 1326, 1350, 1652
MvnI	CGCG	1 cut(s)	1542
MwoI	GCNNNNNNNGC	7 cut(s)	75, 491, 704, 1280, 1289, 1328, 1724
NarI	GGCGCC	1 cut(s)	1676
NcoI	CCATGG	1 cut(s)	951
NdeI	CATATG	1 cut(s)	6
NdeII	GATC	8 cut(s)	301, 372, 545, 621, 712, 749, 1250, 1709
NheI	GCTAGC	1 cut(s)	1028
NlaIV	GGNNCC	4 cut(s)	586, 1291, 1330, 1677
NmuCI	GTSAC	3 cut(s)	779, 1130, 1403
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	298
NspV	TTCGAA	2 cut(s)	1387, 1831
PceI	AGGCCT	1 cut(s)	1148
PciSI	GCTCTTC	1 cut(s)	926
PctI	GAATGC	1 cut(s)	1182
PdmI	GAANNNNTTC	4 cut(s)	149, 504, 1383, 1536
PfeI	GAWTC	5 cut(s)	32, 218, 396, 1244, 1816
PflMI	CCANNNNNTGG	2 cut(s)	313, 1370
PfoI	TCCNGGA	1 cut(s)	1650
PkrI	GCNGC	8 cut(s)	254, 257, 1093, 1140, 1600, 1720, 1723, 1726
PleI	GAGTC	1 cut(s)	931
PluTI	GGCGCC	1 cut(s)	1679
PpsI	GAGTC	1 cut(s)	931
Ppu21I	YACGTR	1 cut(s)	1516
PsiI	TTATAA	1 cut(s)	347
Psp124BI	GAGCTC	4 cut(s)	71, 1285, 1324, 1363
Psp6I	CCWGG	6 cut(s)	1053, 1285, 1309, 1324, 1348, 1650
PspGI	CCWGG	6 cut(s)	1053, 1285, 1309, 1324, 1348, 1650
PspN4I	GGNNCC	4 cut(s)	586, 1291, 1330, 1677
PspPI	GGNCC	2 cut(s)	1019, 1667
PstI	CTGCAG	1 cut(s)	1723
PsuI	RGATCY	5 cut(s)	301, 372, 749, 1250, 1709
PvuII	CAGCTG	2 cut(s)	1138, 1724
RsaI	GTAC	6 cut(s)	127, 191, 241, 363, 443, 866
RsaNI	GTAC	6 cut(s)	126, 190, 240, 362, 442, 865
RseI	CAYNNNNRTG	2 cut(s)	9, 835
SacI	GAGCTC	4 cut(s)	71, 1285, 1324, 1363
SapI	GCTCTTC	1 cut(s)	926
SaqAI	TTAA	3 cut(s)	326, 1121, 1855
SatI	GCNGC	8 cut(s)	253, 256, 1092, 1139, 1599, 1719, 1722, 1725
Sau3AI	GATC	8 cut(s)	301, 372, 545, 621, 712, 749, 1250, 1709
Sau96I	GGNCC	2 cut(s)	1019, 1667
SchI	GAGTC	1 cut(s)	931
ScrFI	CCNGG	6 cut(s)	1055, 1287, 1311, 1326, 1350, 1652
SduI	GDGCHC	4 cut(s)	71, 1285, 1324, 1363
SexAI	ACCWGGT	1 cut(s)	1053
SfaNI	GCATC	6 cut(s)	481, 658, 707, 953, 1261, 1784
SfcI	CTRYAG	3 cut(s)	355, 1395, 1719
SfoI	GGCGCC	1 cut(s)	1677
SfuI	TTCGAA	2 cut(s)	1387, 1831
SinI	GGWCC	2 cut(s)	1019, 1667
SmiMI	CAYNNNNRTG	2 cut(s)	9, 835
SmlI	CTYRAG	1 cut(s)	1415
SmoI	CTYRAG	1 cut(s)	1415
SseBI	AGGCCT	1 cut(s)	1148
SsiI	CCGC	3 cut(s)	788, 942, 1542
SspDI	GGCGCC	1 cut(s)	1675
SspMI	CTAG	5 cut(s)	486, 1029, 1254, 1317, 1356
SstI	GAGCTC	4 cut(s)	71, 1285, 1324, 1363
StuI	AGGCCT	1 cut(s)	1148
StyD4I	CCNGG	6 cut(s)	1053, 1285, 1309, 1324, 1348, 1650
StyI	CCWWGG	1 cut(s)	951
TaaI	ACNGT	7 cut(s)	342, 472, 1170, 1205, 1409, 1639, 1667
TaiI	ACGT	3 cut(s)	899, 1045, 1518
TaqI	TCGA	8 cut(s)	617, 767, 855, 1010, 1083, 1247, 1387, 1831
TatI	WGTACW	3 cut(s)	239, 441, 864
TfiI	GAWTC	5 cut(s)	32, 218, 396, 1244, 1816
Tru1I	TTAA	3 cut(s)	326, 1121, 1855
Tru9I	TTAA	3 cut(s)	326, 1121, 1855
TscAI	CASTG	2 cut(s)	651, 1414
TseFI	GTSAC	3 cut(s)	779, 1130, 1403
TseI	GCWGC	8 cut(s)	252, 255, 1091, 1138, 1598, 1718, 1721, 1724
Tsp45I	GTSAC	3 cut(s)	779, 1130, 1403
TspGWI	ACGGA	1 cut(s)	297
TspRI	CASTG	2 cut(s)	651, 1414
Van91I	CCANNNNNTGG	2 cut(s)	313, 1370
VpaK11BI	GGWCC	2 cut(s)	1019, 1667
XapI	RAATTY	3 cut(s)	1305, 1344, 1834
XceI	RCATGY	1 cut(s)	298
XmiI	GTMKAC	2 cut(s)	817, 1634
XmnI	GAANNNNTTC	4 cut(s)	149, 504, 1383, 1536
XspI	CTAG	5 cut(s)	486, 1029, 1254, 1317, 1356
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.