Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD00G1010100.v1.1 MD00G1186800.v1.1 MD03G1030200.v1.1 MD07G1304900.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0383741 RchiOBHm_Chr4g0439821 RchiOBHm_Chr7g0203551 |
| rosa_laevigata | RLG00000019369 |
| rosa_multiflora | Rmu_co8232911.1_g000001 Rmu_sc0003151.1_g000002 Rmu_sc0010226.1_g000002 Rmu_sc0010675.1_g000007 Rmu_sc0010675.1_g000009 Rmu_ssc0000029.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00253700 |
| rosa_rugosa | Rorug07G0205800 |
| rosa_samantha | Rh1CG438200 Rh4CG108000 Rh4DG093100 Rh7AG206500 Rh7CG219000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 32 |
| AclWI | GGATC | 1 cut(s) | 139 |
| AcoI | YGGCCR | 2 cut(s) | 12, 125 |
| AcsI | RAATTY | 1 cut(s) | 73 |
| Alw21I | GWGCWC | 2 cut(s) | 117, 172 |
| AlwI | GGATC | 1 cut(s) | 139 |
| Aor13HI | TCCGGA | 1 cut(s) | 32 |
| AoxI | GGCC | 3 cut(s) | 12, 125, 273 |
| ApoI | RAATTY | 1 cut(s) | 73 |
| AsuC2I | CCSGG | 1 cut(s) | 129 |
| Bbv12I | GWGCWC | 2 cut(s) | 117, 172 |
| BccI | CCATC | 3 cut(s) | 100, 158, 220 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 94, 128 |
| BcnI | CCSGG | 1 cut(s) | 129 |
| BfmI | CTRYAG | 1 cut(s) | 24 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 20 |
| BglII | AGATCT | 1 cut(s) | 47 |
| Bme1390I | CCNGG | 1 cut(s) | 129 |
| BmiI | GGNNCC | 1 cut(s) | 9 |
| BmrFI | CCNGG | 1 cut(s) | 129 |
| BpuMI | CCSGG | 1 cut(s) | 129 |
| Bsa29I | ATCGAT | 1 cut(s) | 134 |
| BsaWI | WCCGGW | 1 cut(s) | 32 |
| BseAI | TCCGGA | 1 cut(s) | 32 |
| BseCI | ATCGAT | 1 cut(s) | 134 |
| BseGI | GGATG | 1 cut(s) | 247 |
| BseMII | CTCAG | 1 cut(s) | 83 |
| BseX3I | CGGCCG | 1 cut(s) | 12 |
| Bsh1285I | CGRYCG | 1 cut(s) | 15 |
| BshFI | GGCC | 3 cut(s) | 14, 127, 275 |
| BshVI | ATCGAT | 1 cut(s) | 134 |
| BsiEI | CGRYCG | 1 cut(s) | 15 |
| BsiHKAI | GWGCWC | 2 cut(s) | 117, 172 |
| BsiSI | CCGG | 4 cut(s) | 11, 33, 128, 276 |
| BsnI | GGCC | 3 cut(s) | 14, 127, 275 |
| Bsp1286I | GDGCHC | 2 cut(s) | 117, 172 |
| Bsp13I | TCCGGA | 1 cut(s) | 32 |
| Bsp143I | GATC | 3 cut(s) | 47, 61, 131 |
| BspANI | GGCC | 3 cut(s) | 14, 127, 275 |
| BspCNI | CTCAG | 1 cut(s) | 84 |
| BspDI | ATCGAT | 1 cut(s) | 134 |
| BspEI | TCCGGA | 1 cut(s) | 32 |
| BspLI | GGNNCC | 1 cut(s) | 9 |
| BspPI | GGATC | 1 cut(s) | 139 |
| BssMI | GATC | 3 cut(s) | 47, 61, 131 |
| BstC8I | GCNNGC | 1 cut(s) | 234 |
| BstDEI | CTNAG | 1 cut(s) | 92 |
| BstF5I | GGATG | 1 cut(s) | 247 |
| BstKTI | GATC | 3 cut(s) | 50, 64, 134 |
| BstMBI | GATC | 3 cut(s) | 47, 61, 131 |
| BstMCI | CGRYCG | 1 cut(s) | 15 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 20 |
| BstNSI | RCATGY | 1 cut(s) | 236 |
| BstSCI | CCNGG | 1 cut(s) | 127 |
| BstSFI | CTRYAG | 1 cut(s) | 24 |
| BstX2I | RGATCY | 1 cut(s) | 47 |
| BstYI | RGATCY | 1 cut(s) | 47 |
| BstZI | CGGCCG | 1 cut(s) | 12 |
| Bsu15I | ATCGAT | 1 cut(s) | 134 |
| BsuRI | GGCC | 3 cut(s) | 14, 127, 275 |
| BsuTUI | ATCGAT | 1 cut(s) | 134 |
| BtgZI | GCGATG | 1 cut(s) | 119 |
| BtsCI | GGATG | 1 cut(s) | 247 |
| Cac8I | GCNNGC | 1 cut(s) | 234 |
| ClaI | ATCGAT | 1 cut(s) | 134 |
| CseI | GACGC | 1 cut(s) | 18 |
| CviAII | CATG | 2 cut(s) | 123, 233 |
| CviJI | RGCY | 7 cut(s) | 8, 14, 23, 91, 127, 275, 286 |
| CviKI_1 | RGCY | 7 cut(s) | 8, 14, 23, 91, 127, 275, 286 |
| DdeI | CTNAG | 1 cut(s) | 92 |
| DpnI | GATC | 3 cut(s) | 49, 63, 133 |
| DpnII | GATC | 3 cut(s) | 47, 61, 131 |
| EaeI | YGGCCR | 2 cut(s) | 12, 125 |
| EagI | CGGCCG | 1 cut(s) | 12 |
| EclXI | CGGCCG | 1 cut(s) | 12 |
| Eco52I | CGGCCG | 1 cut(s) | 12 |
| FaeI | CATG | 2 cut(s) | 126, 236 |
| FaiI | YATR | 5 cut(s) | 70, 124, 219, 221, 234 |
| FatI | CATG | 2 cut(s) | 122, 232 |
| FokI | GGATG | 1 cut(s) | 254 |
| HaeIII | GGCC | 3 cut(s) | 14, 127, 275 |
| HapII | CCGG | 4 cut(s) | 11, 33, 128, 276 |
| HgaI | GACGC | 1 cut(s) | 18 |
| Hin1II | CATG | 2 cut(s) | 126, 236 |
| HinfI | GANTC | 4 cut(s) | 56, 176, 185, 298 |
| HpaII | CCGG | 4 cut(s) | 11, 33, 128, 276 |
| Hpy188I | TCNGA | 3 cut(s) | 52, 61, 66 |
| Hpy188III | TCNNGA | 2 cut(s) | 33, 173 |
| HpyCH4V | TGCA | 1 cut(s) | 236 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 20 |
| HpyF3I | CTNAG | 1 cut(s) | 92 |
| Hsp92II | CATG | 2 cut(s) | 126, 236 |
| Kpn2I | TCCGGA | 1 cut(s) | 32 |
| Kzo9I | GATC | 3 cut(s) | 47, 61, 131 |
| LmnI | GCTCC | 1 cut(s) | 13 |
| LpnPI | CCDG | 5 cut(s) | 4, 24, 46, 141, 289 |
| MalI | GATC | 3 cut(s) | 49, 63, 133 |
| MboI | GATC | 3 cut(s) | 47, 61, 131 |
| MboII | GAAGA | 1 cut(s) | 235 |
| MflI | RGATCY | 1 cut(s) | 47 |
| MhlI | GDGCHC | 2 cut(s) | 117, 172 |
| MluCI | AATT | 1 cut(s) | 73 |
| MlyI | GAGTC | 1 cut(s) | 292 |
| MmeI | TCCRAC | 2 cut(s) | 23, 126 |
| MnlI | CCTC | 4 cut(s) | 81, 142, 261, 265 |
| MroI | TCCGGA | 1 cut(s) | 32 |
| MspI | CCGG | 4 cut(s) | 11, 33, 128, 276 |
| MspR9I | CCNGG | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 20 |
| NciI | CCSGG | 1 cut(s) | 129 |
| NdeII | GATC | 3 cut(s) | 47, 61, 131 |
| NlaIII | CATG | 2 cut(s) | 126, 236 |
| NlaIV | GGNNCC | 1 cut(s) | 9 |
| NmeAIII | GCCGAG | 2 cut(s) | 80, 98 |
| NspI | RCATGY | 1 cut(s) | 236 |
| PaeI | GCATGC | 1 cut(s) | 236 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 140 |
| PfeI | GAWTC | 3 cut(s) | 56, 176, 185 |
| PleI | GAGTC | 1 cut(s) | 292 |
| PpsI | GAGTC | 1 cut(s) | 292 |
| PspN4I | GGNNCC | 1 cut(s) | 9 |
| PsuI | RGATCY | 1 cut(s) | 47 |
| Sau3AI | GATC | 3 cut(s) | 47, 61, 131 |
| SchI | GAGTC | 1 cut(s) | 292 |
| ScrFI | CCNGG | 1 cut(s) | 129 |
| SduI | GDGCHC | 2 cut(s) | 117, 172 |
| SfcI | CTRYAG | 1 cut(s) | 24 |
| SphI | GCATGC | 1 cut(s) | 236 |
| Sse9I | AATT | 1 cut(s) | 73 |
| StyD4I | CCNGG | 1 cut(s) | 127 |
| TaqI | TCGA | 1 cut(s) | 134 |
| TasI | AATT | 1 cut(s) | 73 |
| TfiI | GAWTC | 3 cut(s) | 56, 176, 185 |
| TspDTI | ATGAA | 2 cut(s) | 69, 236 |
| XapI | RAATTY | 1 cut(s) | 73 |
| XceI | RCATGY | 1 cut(s) | 236 |