Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004334

Physical Location & Seq

Genomic Coordinates Reverse (-)

8180768 .. 8184845

Gene Structure 4078 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00287130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGAATCGGAGTTTTAGGGCTCAGGAGTCGCAAATGCAGGCGATGATGAAGCAGAGGCAGCAGCTCAGGGCCTCAATGAGGAAGGAGAAGGAAGAAGAGCTGGCTTTGTTTCTAGAGATGAAGAAGAGGGAGAAGGAAAGGAACGATCTTCTTCTCAATTCCGAAGATTTCGATGCGCCATCAGGGGCTAAACCTGGAACTTCTCCCATTTTTAATATATCCTCATCAACGCCGGCGCCTGCACGCAAGACTGGAGCTGATGATTTTCTCAATTCCGAGAATGATAAGAACGACTATGATTGGCTTTTAACTCCGCCTGGGACTCCTCTTTTCCCTTCATTGGAAATGGAATCACATAAGACTGTGATGAGTCAGCTTGGAACCCCAAAGGCTCGTCCGACTGCACTCAAATCTAGACTAGCAAACCCCCAGCCAGAGCCTGTTGCTAGGAGCAACTTAGTATCTAAACAATCAGCTTCTTCCCCTGGGTTGAATTCTTCAAGTTCAGGTATCCGGAGGCCCTCATCATCTGGGGGTCCAGGATCAAGACCTGCAACACCAACTGGACGCCCCACAGTGACTTCAGCTTCTAAACCTTCAAGATCGTCAACACCAACTTCTCGAGCAACACTAACCAAGTCCACGGTTTCTTCAGCTAAGCCCTCAGTTTCCACAACTAAATCCACAATCCCTGGAGCTAAATCCACAATTCCTGCAACTAAATCTACAATTCCCTCAAGATCTTCTACACCTTCAAGGTCTACGGCAAGATCTTCAACACCAACTGGCAGACCCACCGTGCCCCCACCCAAATCTGTATCAAGAGCATCAACGCCAACTCGTCGACCATCCATGCCATCCAGTGCACCTAGTATATCAGCTCCTACATCAAAGCCCTCTCCTTCAGTTTCGAAGCCAGTTCCCTCAGCAACAAGAAATCCGGTGCCATCACGTGGCGCATCGCCGACAGTGAAATCTAGACCATGGAAGCCCTCGGAAATGCCTGGTTTCTCGATGGATGCCCCACCAAATTTAAGGACAACACTTCCTGATAGACCACTTTCAGCTTCTAGAGGTAGGCCAGGAGCACCCAGCTCTAGATCTTCTTCCATTGAGCCTGGTCCTCCTGGAAGACCAAGAAGACAATCATGCTCTCCTTCAAGAGGAAGGGCTCCCAATGGCAGAACTCATATAAGCGGGAGCTCTGTTCCTGCATTCAGTCGTGGGCACTCTAAAGTTGATGACAATGTGAGCCCTGTTTTAATGGGAACGAAAATGGTTGAGCGGGTAATAAATATGCGGAAACTGGCTCCCCCCAAGCACGATGACAAACAATCTCCTCATGGTAACCAGTCTGGGAAGTCATCTTCATCCCCAGACAGTTCAGGCTTTGGTAGATCACTCTCAAAGAAATCCCTCGATATGGCTATACGTCACATGGATATAAGGCGAAGCATTCCTGGTAATTTGCGGCCGTTGATGACAAATATTCCTGCATCCTCTATGTACAGTGTGAGATCAGGGCCTGCACGAAGCAGAACGGTTAGTGTGTCAGATTCTCCTCTTGCCACCAGCAGTAATGCTAGCTCTGAAGTCAGTGTAAACAACAATGGCCTTTGTTTAGATGTGAGTGGAGTAGAAGATGATATTGGCAGTGAGAGAGGCGGTCGATCTCCTGCCAGTGTGCATGGTAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

565

Amino Acids

59.74

Weight (kDa)

11.3

Isoelectric Point (pI)

80.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004334)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40070 AT2G40070 AT2G40070
fragaria_vesca	FvH4_7g24310 FvH4_7g24310 FvH4_7g24320 FvH4_7g24320
malus_domestica	MD01G1132400.v1.1 MD07G1220000.v1.1 MD07G1220200.v1.1
prunus_persica	Prupe.2G248600_v2.0.a1 Prupe.2G248600_v2.0.a1
pyrus_communis	pycom01g16900 pycom07g19910
rosa_chinensis	RchiOBHm_Chr1g0369941 RchiOBHm_Chr1g0369981
rosa_laevigata	RLG00000027081 RLG00000027086
rosa_multiflora	Rmu_co8421201.1_g000001 Rmu_co8476543.1_g000001 Rmu_sc0008140.1_g000014 Rmu_sc0008140.1_g000020
rosa_roxburghii	Rroxscaffold_4G00286910 Rroxscaffold_4G00287130
rosa_rugosa	Rorug01G0352900
rosa_samantha	Rh1AG361700 Rh1AG361800 Rh1BG325000 Rh1CG338200 Rh1CG338300 Rh1DG355400
rosa_wichuraiana	Rw1G031830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	559
AccB1I	GGYRCC	2 cut(s)	235, 943
AccB7I	CCANNNNNTGG	1 cut(s)	953
AccBSI	CCGCTC	1 cut(s)	1285
AccI	GTMKAC	2 cut(s)	761, 844
AccIII	TCCGGA	1 cut(s)	513
AciI	CCGC	6 cut(s)	314, 1197, 1285, 1300, 1471, 1665
AclWI	GGATC	1 cut(s)	550
AcoI	YGGCCR	1 cut(s)	1472
AcsI	RAATTY	2 cut(s)	493, 1030
AcuI	CTGAAG	4 cut(s)	567, 636, 888, 1611
AcvI	CACGTG	1 cut(s)	953
AcyI	GRCGYC	2 cut(s)	236, 568
AfaI	GTAC	1 cut(s)	1508
AfiI	CCNNNNNNNGG	5 cut(s)	78, 340, 953, 1163, 1423
AgsI	TTSAA	6 cut(s)	493, 501, 600, 756, 777, 1161
AjuI	GAANNNNNNNTTGG	2 cut(s)	1632, 1664
Alw21I	GWGCWC	3 cut(s)	868, 1090, 1205
Alw44I	GTGCAC	1 cut(s)	864
AlwI	GGATC	1 cut(s)	550
AlwNI	CAGNNNCTG	2 cut(s)	440, 1526
Ama87I	CYCGRG	1 cut(s)	621
Aor13HI	TCCGGA	1 cut(s)	513
AoxI	GGCC	6 cut(s)	69, 518, 1079, 1472, 1523, 1612
ApaLI	GTGCAC	1 cut(s)	864
ApeKI	GCWGC	2 cut(s)	58, 61
ApoI	RAATTY	2 cut(s)	493, 1030
AspLEI	GCGC	3 cut(s)	178, 238, 959
AspS9I	GGNCC	5 cut(s)	69, 519, 536, 1121, 1523
AsuII	TTCGAA	1 cut(s)	911
AsuNHI	GCTAGC	1 cut(s)	1583
AvaI	CYCGRG	1 cut(s)	621
AvaII	GGWCC	2 cut(s)	536, 1121
BaeGI	GKGCMC	3 cut(s)	804, 868, 1230
BanI	GGYRCC	2 cut(s)	235, 943
BanII	GRGCYC	4 cut(s)	22, 1174, 1205, 1256
BbrPI	CACGTG	1 cut(s)	953
BbsI	GAAGAC	2 cut(s)	1138, 1147
Bbv12I	GWGCWC	3 cut(s)	868, 1090, 1205
BbvCI	CCTCAGC	1 cut(s)	925
BbvI	GCAGC	2 cut(s)	70, 73
BccI	CCATC	5 cut(s)	187, 856, 865, 955, 1009
BceAI	ACGGC	2 cut(s)	780, 1459
BciVI	GTATCC	1 cut(s)	521
BfaI	CTAG	9 cut(s)	113, 414, 419, 447, 870, 978, 1071, 1098, 1584
BfoI	RGCGCY	1 cut(s)	239
BfuAI	ACCTGC	1 cut(s)	559
BfuI	GTATCC	1 cut(s)	521
BglII	AGATCT	3 cut(s)	740, 770, 1100
BisI	GCNGC	3 cut(s)	59, 62, 1472
BlpI	GCTNAGC	1 cut(s)	657
BlsI	GCNGC	3 cut(s)	60, 63, 1473
Bme18I	GGWCC	2 cut(s)	536, 1121
BmeT110I	CYCGRG	1 cut(s)	621
BmgT120I	GGNCC	5 cut(s)	69, 519, 536, 1121, 1523
BmiI	GGNNCC	6 cut(s)	237, 382, 537, 945, 1173, 1311
BmsI	GCATC	5 cut(s)	163, 836, 968, 1009, 1505
BmtI	GCTAGC	1 cut(s)	1587
BpiI	GAAGAC	2 cut(s)	1138, 1147
BpmI	CTGGAG	2 cut(s)	273, 714
Bpu10I	CCTNAGC	3 cut(s)	21, 65, 925
Bpu1102I	GCTNAGC	1 cut(s)	657
Bpu14I	TTCGAA	1 cut(s)	911
BpuEI	CTTGAG	1 cut(s)	721
BsaAI	YACGTR	1 cut(s)	953
BsaHI	GRCGYC	2 cut(s)	236, 568
BsaJI	CCNNGG	7 cut(s)	317, 484, 485, 642, 691, 983, 993
BsaWI	WCCGGW	2 cut(s)	513, 940
Bsc4I	CCNNNNNNNGG	5 cut(s)	78, 340, 953, 1163, 1423
Bse118I	RCCGGY	1 cut(s)	232
Bse1I	ACTGG	8 cut(s)	256, 568, 790, 861, 917, 1311, 1351, 1680
BseAI	TCCGGA	1 cut(s)	513
BseDI	CCNNGG	7 cut(s)	317, 484, 485, 642, 691, 983, 993
BseGI	GGATG	5 cut(s)	848, 857, 1024, 1370, 1496
BseLI	CCNNNNNNNGG	5 cut(s)	78, 340, 953, 1163, 1423
BseMII	CTCAG	4 cut(s)	35, 79, 678, 939
BseNI	ACTGG	8 cut(s)	256, 568, 790, 861, 917, 1311, 1351, 1680
BseRI	GAGGAG	3 cut(s)	315, 1329, 1551
BseSI	GKGCMC	3 cut(s)	804, 868, 1230
BseX3I	CGGCCG	1 cut(s)	1472
BseXI	GCAGC	2 cut(s)	70, 73
BseYI	CCCAGC	2 cut(s)	429, 1091
BsgI	GTGCAG	3 cut(s)	225, 387, 1512
Bsh1285I	CGRYCG	2 cut(s)	1475, 1669
BshFI	GGCC	6 cut(s)	71, 520, 1081, 1474, 1525, 1614
BshNI	GGYRCC	2 cut(s)	235, 943
BsiEI	CGRYCG	2 cut(s)	1475, 1669
BsiHKAI	GWGCWC	3 cut(s)	868, 1090, 1205
BsiHKCI	CYCGRG	1 cut(s)	621
BsiSI	CCGG	3 cut(s)	233, 514, 941
BslFI	GGGAC	1 cut(s)	334
BslI	CCNNNNNNNGG	5 cut(s)	78, 340, 953, 1163, 1423
BsmFI	GGGAC	1 cut(s)	334
BsmI	GAATGC	2 cut(s)	1214, 1455
BsnI	GGCC	6 cut(s)	71, 520, 1081, 1474, 1525, 1614
BsoBI	CYCGRG	1 cut(s)	621
Bsp119I	TTCGAA	1 cut(s)	911
Bsp1286I	GDGCHC	8 cut(s)	22, 804, 868, 1090, 1174, 1205, 1230, 1256
Bsp13I	TCCGGA	1 cut(s)	513
Bsp1407I	TGTACA	1 cut(s)	1506
Bsp143I	GATC	9 cut(s)	145, 542, 602, 740, 770, 1100, 1397, 1517, 1670
Bsp1720I	GCTNAGC	1 cut(s)	657
Bsp19I	CCATGG	1 cut(s)	983
BspACI	CCGC	6 cut(s)	314, 1197, 1285, 1300, 1471, 1665
BspANI	GGCC	6 cut(s)	71, 520, 1081, 1474, 1525, 1614
BspCNI	CTCAG	4 cut(s)	34, 78, 677, 938
BspEI	TCCGGA	1 cut(s)	513
BspLI	GGNNCC	6 cut(s)	237, 382, 537, 945, 1173, 1311
BspMI	ACCTGC	1 cut(s)	559
BspOI	GCTAGC	1 cut(s)	1587
BspPI	GGATC	1 cut(s)	550
BspQI	GCTCTTC	1 cut(s)	90
BspT104I	TTCGAA	1 cut(s)	911
BspT107I	GGYRCC	2 cut(s)	235, 943
BsrBI	CCGCTC	1 cut(s)	1285
BsrFI	RCCGGY	1 cut(s)	232
BsrGI	TGTACA	1 cut(s)	1506
BsrI	ACTGG	8 cut(s)	256, 568, 790, 861, 917, 1311, 1351, 1680
BssAI	RCCGGY	1 cut(s)	232
BssECI	CCNNGG	7 cut(s)	317, 484, 485, 642, 691, 983, 993
BssMI	GATC	9 cut(s)	145, 542, 602, 740, 770, 1100, 1397, 1517, 1670
BssNI	GRCGYC	2 cut(s)	236, 568
BssT1I	CCWWGG	1 cut(s)	983
Bst4CI	ACNGT	8 cut(s)	364, 577, 646, 799, 970, 1382, 1511, 1543
Bst6I	CTCTTC	2 cut(s)	90, 119
BstACI	GRCGYC	2 cut(s)	236, 568
BstAUI	TGTACA	1 cut(s)	1506
BstBAI	YACGTR	1 cut(s)	953
BstBI	TTCGAA	1 cut(s)	911
BstC8I	GCNNGC	7 cut(s)	39, 102, 234, 240, 244, 1527, 1585
BstDEI	CTNAG	6 cut(s)	21, 65, 457, 657, 664, 925
BstDSI	CCRYGG	2 cut(s)	642, 983
BstEII	GGTNACC	1 cut(s)	1346
BstENI	CCTNNNNNAGG	2 cut(s)	76, 1161
BstF5I	GGATG	5 cut(s)	848, 857, 1024, 1370, 1496
BstH2I	RGCGCY	1 cut(s)	239
BstHHI	GCGC	3 cut(s)	178, 238, 959
BstKTI	GATC	9 cut(s)	148, 545, 605, 743, 773, 1103, 1400, 1520, 1673
BstMBI	GATC	9 cut(s)	145, 542, 602, 740, 770, 1100, 1397, 1517, 1670
BstMCI	CGRYCG	2 cut(s)	1475, 1669
BstMWI	GCNNNNNNNGC	1 cut(s)	58
BstPI	GGTNACC	1 cut(s)	1346
BstSLI	GKGCMC	3 cut(s)	804, 868, 1230
BstV1I	GCAGC	2 cut(s)	70, 73
BstV2I	GAAGAC	2 cut(s)	1138, 1147
BstX2I	RGATCY	3 cut(s)	740, 770, 1100
BstYI	RGATCY	3 cut(s)	740, 770, 1100
BstZI	CGGCCG	1 cut(s)	1472
BsuI	GTATCC	1 cut(s)	521
BsuRI	GGCC	6 cut(s)	71, 520, 1081, 1474, 1525, 1614
BtgI	CCRYGG	2 cut(s)	642, 983
BtgZI	GCGATG	2 cut(s)	56, 945
BtsCI	GGATG	5 cut(s)	848, 857, 1024, 1370, 1496
BtsI	GCAGTG	1 cut(s)	1660
BtsIMutI	CAGTG	7 cut(s)	582, 868, 975, 1516, 1603, 1660, 1687
BveI	ACCTGC	1 cut(s)	559
Cac8I	GCNNGC	7 cut(s)	39, 102, 234, 240, 244, 1527, 1585
CaiI	CAGNNNCTG	2 cut(s)	440, 1526
CfoI	GCGC	3 cut(s)	178, 238, 959
Cfr10I	RCCGGY	1 cut(s)	232
Cfr13I	GGNCC	5 cut(s)	69, 519, 536, 1121, 1523
CseI	GACGC	1 cut(s)	576
Csp6I	GTAC	1 cut(s)	1507
CviAII	CATG	6 cut(s)	853, 984, 1149, 1343, 1438, 1688
CviQI	GTAC	1 cut(s)	1507
DdeI	CTNAG	6 cut(s)	21, 65, 457, 657, 664, 925
DinI	GGCGCC	1 cut(s)	237
DpnI	GATC	9 cut(s)	147, 544, 604, 742, 772, 1102, 1399, 1519, 1672
DpnII	GATC	9 cut(s)	145, 542, 602, 740, 770, 1100, 1397, 1517, 1670
EaeI	YGGCCR	1 cut(s)	1472
EagI	CGGCCG	1 cut(s)	1472
Eam1104I	CTCTTC	2 cut(s)	90, 119
EarI	CTCTTC	2 cut(s)	90, 119
EciI	GGCGGA	1 cut(s)	303
Ecl136II	GAGCTC	1 cut(s)	1203
EclXI	CGGCCG	1 cut(s)	1472
Eco130I	CCWWGG	1 cut(s)	983
Eco24I	GRGCYC	4 cut(s)	22, 1174, 1205, 1256
Eco47I	GGWCC	2 cut(s)	536, 1121
Eco52I	CGGCCG	1 cut(s)	1472
Eco53kI	GAGCTC	1 cut(s)	1203
Eco57I	CTGAAG	4 cut(s)	567, 636, 888, 1611
Eco72I	CACGTG	1 cut(s)	953
Eco88I	CYCGRG	1 cut(s)	621
Eco91I	GGTNACC	1 cut(s)	1346
EcoICRI	GAGCTC	1 cut(s)	1203
EcoNI	CCTNNNNNAGG	2 cut(s)	76, 1161
EcoO109I	RGGNCCY	3 cut(s)	69, 519, 1523
EcoO65I	GGTNACC	1 cut(s)	1346
EcoRI	GAATTC	1 cut(s)	493
EcoT14I	CCWWGG	1 cut(s)	983
EcoT38I	GRGCYC	4 cut(s)	22, 1174, 1205, 1256
EgeI	GGCGCC	1 cut(s)	237
EheI	GGCGCC	1 cut(s)	237
ErhI	CCWWGG	1 cut(s)	983
FaeI	CATG	6 cut(s)	856, 987, 1152, 1346, 1441, 1691
FaqI	GGGAC	1 cut(s)	334
FatI	CATG	6 cut(s)	852, 983, 1148, 1342, 1437, 1687
FauI	CCCGC	2 cut(s)	1190, 1278
FblI	GTMKAC	2 cut(s)	761, 844
Fnu4HI	GCNGC	3 cut(s)	59, 62, 1472
FokI	GGATG	5 cut(s)	835, 844, 1031, 1357, 1483
FriOI	GRGCYC	4 cut(s)	22, 1174, 1205, 1256
Fsp4HI	GCNGC	3 cut(s)	59, 62, 1472
FspBI	CTAG	9 cut(s)	113, 414, 419, 447, 870, 978, 1071, 1098, 1584
GlaI	GCGC	3 cut(s)	177, 237, 958
GluI	GCNGC	3 cut(s)	59, 62, 1472
GsaI	CCCAGC	2 cut(s)	433, 1095
GsuI	CTGGAG	2 cut(s)	273, 714
HaeII	RGCGCY	1 cut(s)	239
HaeIII	GGCC	6 cut(s)	71, 520, 1081, 1474, 1525, 1614
HapII	CCGG	3 cut(s)	233, 514, 941
HgaI	GACGC	1 cut(s)	576
HhaI	GCGC	3 cut(s)	178, 238, 959
Hin1I	GRCGYC	2 cut(s)	236, 568
Hin1II	CATG	6 cut(s)	856, 987, 1152, 1346, 1441, 1691
Hin6I	GCGC	3 cut(s)	176, 236, 957
HinP1I	GCGC	3 cut(s)	176, 236, 957
HincII	GTYRAC	2 cut(s)	609, 845
HindII	GTYRAC	2 cut(s)	609, 845
HinfI	GANTC	6 cut(s)	4, 26, 322, 350, 370, 1556
HpaII	CCGG	3 cut(s)	233, 514, 941
Hpy166II	GTNNAC	6 cut(s)	609, 642, 762, 845, 866, 1603
Hpy188I	TCNGA	7 cut(s)	9, 163, 277, 399, 997, 1555, 1591
Hpy8I	GTNNAC	6 cut(s)	609, 642, 762, 845, 866, 1603
Hpy99I	CGWCG	1 cut(s)	846
HpyAV	CCTTC	9 cut(s)	76, 82, 127, 345, 606, 762, 912, 1161, 1167
HpyCH4III	ACNGT	8 cut(s)	364, 577, 646, 799, 970, 1382, 1511, 1543
HpyCH4IV	ACGT	2 cut(s)	952, 1432
HpyF10VI	GCNNNNNNNGC	1 cut(s)	58
HpyF3I	CTNAG	6 cut(s)	21, 65, 457, 657, 664, 925
HpySE526I	ACGT	2 cut(s)	952, 1432
Hsp92I	GRCGYC	2 cut(s)	236, 568
Hsp92II	CATG	6 cut(s)	856, 987, 1152, 1346, 1441, 1691
HspAI	GCGC	3 cut(s)	176, 236, 957
KasI	GGCGCC	1 cut(s)	235
Kpn2I	TCCGGA	1 cut(s)	513
KroI	GCCGGC	1 cut(s)	232
KroNI	GCCGGC	1 cut(s)	234
Kzo9I	GATC	9 cut(s)	145, 542, 602, 740, 770, 1100, 1397, 1517, 1670
LguI	GCTCTTC	1 cut(s)	90
LmnI	GCTCC	8 cut(s)	254, 450, 695, 886, 1085, 1177, 1200, 1315
Lsp1109I	GCAGC	2 cut(s)	70, 73
LweI	GCATC	5 cut(s)	163, 836, 968, 1009, 1505
MaeI	CTAG	9 cut(s)	113, 414, 419, 447, 870, 978, 1071, 1098, 1584
MaeII	ACGT	2 cut(s)	952, 1432
MaeIII	GTNAC	3 cut(s)	577, 1346, 1433
MalI	GATC	9 cut(s)	147, 544, 604, 742, 772, 1102, 1399, 1519, 1672
MbiI	CCGCTC	1 cut(s)	1285
MboI	GATC	9 cut(s)	145, 542, 602, 740, 770, 1100, 1397, 1517, 1670
MflI	RGATCY	3 cut(s)	740, 770, 1100
MhlI	GDGCHC	8 cut(s)	22, 804, 868, 1090, 1174, 1205, 1230, 1256
MluCI	AATT	7 cut(s)	157, 271, 493, 708, 729, 1030, 1465
Mly113I	GGCGCC	1 cut(s)	236
MlyI	GAGTC	3 cut(s)	35, 316, 379
MmeI	TCCRAC	1 cut(s)	422
MreI	CGCCGGCG	1 cut(s)	232
MroI	TCCGGA	1 cut(s)	513
MroNI	GCCGGC	1 cut(s)	232
MseI	TTAA	4 cut(s)	213, 308, 1034, 1262
MspI	CCGG	3 cut(s)	233, 514, 941
Mva1269I	GAATGC	2 cut(s)	1214, 1455
MwoI	GCNNNNNNNGC	1 cut(s)	58
NaeI	GCCGGC	1 cut(s)	234
NarI	GGCGCC	1 cut(s)	236
NcoI	CCATGG	1 cut(s)	983
NdeII	GATC	9 cut(s)	145, 542, 602, 740, 770, 1100, 1397, 1517, 1670
NgoMIV	GCCGGC	1 cut(s)	232
NheI	GCTAGC	1 cut(s)	1583
NlaIII	CATG	6 cut(s)	856, 987, 1152, 1346, 1441, 1691
NlaIV	GGNNCC	6 cut(s)	237, 382, 537, 945, 1173, 1311
NmuCI	GTSAC	2 cut(s)	577, 1433
NspV	TTCGAA	1 cut(s)	911
PaeR7I	CTCGAG	1 cut(s)	621
PasI	CCCWGGG	1 cut(s)	485
PciSI	GCTCTTC	1 cut(s)	90
PctI	GAATGC	2 cut(s)	1214, 1455
PdiI	GCCGGC	1 cut(s)	234
PfeI	GAWTC	3 cut(s)	4, 350, 1556
PflMI	CCANNNNNTGG	1 cut(s)	953
PfoI	TCCNGGA	2 cut(s)	538, 1126
PkrI	GCNGC	3 cut(s)	60, 63, 1473
PleI	GAGTC	3 cut(s)	34, 316, 378
PluTI	GGCGCC	1 cut(s)	239
PmaCI	CACGTG	1 cut(s)	953
PmlI	CACGTG	1 cut(s)	953
PpsI	GAGTC	3 cut(s)	34, 316, 378
Ppu21I	YACGTR	1 cut(s)	953
Psp124BI	GAGCTC	1 cut(s)	1205
PspCI	CACGTG	1 cut(s)	953
PspEI	GGTNACC	1 cut(s)	1346
PspFI	CCCAGC	2 cut(s)	429, 1091
PspN4I	GGNNCC	6 cut(s)	237, 382, 537, 945, 1173, 1311
PspPI	GGNCC	5 cut(s)	69, 519, 536, 1121, 1523
PstNI	CAGNNNCTG	2 cut(s)	440, 1526
PsuI	RGATCY	3 cut(s)	740, 770, 1100
RsaI	GTAC	1 cut(s)	1508
RsaNI	GTAC	1 cut(s)	1507
SacI	GAGCTC	1 cut(s)	1205
SalI	GTCGAC	1 cut(s)	843
SapI	GCTCTTC	1 cut(s)	90
SaqAI	TTAA	4 cut(s)	213, 308, 1034, 1262
SatI	GCNGC	3 cut(s)	59, 62, 1472
Sau3AI	GATC	9 cut(s)	145, 542, 602, 740, 770, 1100, 1397, 1517, 1670
Sau96I	GGNCC	5 cut(s)	69, 519, 536, 1121, 1523
SchI	GAGTC	3 cut(s)	35, 316, 379
SduI	GDGCHC	8 cut(s)	22, 804, 868, 1090, 1174, 1205, 1230, 1256
SfaNI	GCATC	5 cut(s)	163, 836, 968, 1009, 1505
SfoI	GGCGCC	1 cut(s)	237
Sfr274I	CTCGAG	1 cut(s)	621
SfuI	TTCGAA	1 cut(s)	911
SgrAI	CRCCGGYG	1 cut(s)	232
SinI	GGWCC	2 cut(s)	536, 1121
SlaI	CTCGAG	1 cut(s)	621
SmlI	CTYRAG	2 cut(s)	621, 736
SmoI	CTYRAG	2 cut(s)	621, 736
Sse9I	AATT	7 cut(s)	157, 271, 493, 708, 729, 1030, 1465
SsiI	CCGC	6 cut(s)	314, 1197, 1285, 1300, 1471, 1665
SspDI	GGCGCC	1 cut(s)	235
SspI	AATATT	1 cut(s)	1489
SspMI	CTAG	9 cut(s)	113, 414, 419, 447, 870, 978, 1071, 1098, 1584
SstI	GAGCTC	1 cut(s)	1205
StyI	CCWWGG	1 cut(s)	983
TaaI	ACNGT	8 cut(s)	364, 577, 646, 799, 970, 1382, 1511, 1543
TaiI	ACGT	2 cut(s)	955, 1435
TaqI	TCGA	7 cut(s)	171, 622, 844, 911, 1013, 1419, 1669
TasI	AATT	7 cut(s)	157, 271, 493, 708, 729, 1030, 1465
TatI	WGTACW	1 cut(s)	1506
TauI	GCSGC	1 cut(s)	1474
TfiI	GAWTC	3 cut(s)	4, 350, 1556
Tru1I	TTAA	4 cut(s)	213, 308, 1034, 1262
Tru9I	TTAA	4 cut(s)	213, 308, 1034, 1262
TscAI	CASTG	7 cut(s)	582, 868, 975, 1516, 1603, 1660, 1687
TseFI	GTSAC	2 cut(s)	577, 1433
TseI	GCWGC	2 cut(s)	58, 61
Tsp45I	GTSAC	2 cut(s)	577, 1433
TspDTI	ATGAA	5 cut(s)	17, 62, 134, 327, 1359
TspRI	CASTG	7 cut(s)	582, 868, 975, 1516, 1603, 1660, 1687
Van91I	CCANNNNNTGG	1 cut(s)	953
VneI	GTGCAC	1 cut(s)	864
VpaK11BI	GGWCC	2 cut(s)	536, 1121
XagI	CCTNNNNNAGG	2 cut(s)	76, 1161
XapI	RAATTY	2 cut(s)	493, 1030
XbaI	TCTAGA	5 cut(s)	112, 413, 977, 1070, 1097
XhoI	CTCGAG	1 cut(s)	621
XmiI	GTMKAC	2 cut(s)	761, 844
XspI	CTAG	9 cut(s)	113, 414, 419, 447, 870, 978, 1071, 1098, 1584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.