Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0004334

Physical Location & Seq

Genomic Coordinates Reverse (-)

57904196 .. 57907419

Gene Structure 3224 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG355400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGAATCGGAGTTTTAGGGCTCAGGAGTCGCAAATGCAGGCGATGATGAAGCAGAGGCAGCAGCTCAGGGCCTCAATGAGGAAGGAGAAGGAAGAAGAGCTGGCTTTGTTTCTAGAGATGAAGAAGAGGGAGAAGGAAAGGAACGATCTTCTTCTCAACAGTTCTGAAGAGTTTGATGCGCCATTAGGGGCTAAACCCGGAACTTCTCCCATTTTTAATATATCCTCATCAACGCCGGCACCTGCACGCAAGACTGGAGCTGATGATTTCCTCAATTCCGAGAATGATAAGAATGACTATGATTGTTGTGTTTTAGCTGCGAGGGTTCTGATAGATGATAAGGGAGCCGGTATCCGGAGGCCCTCATCATCTGGGGGTCCAGGATCAAGACCTGCAACACCAACTGGACGCCCCACAGTGACTTCAGCTCCTAAACCTTCAAGATCGTCAACACCTACTTCTCGAGCAACATTAACAAAGTCCACGGTTTCTGCAGCCAAGCCCTCAGTTTCGACAATTAAATCCGCAATCCCTGGAACTAAATCCACAATTCCTGCAACTAAATCTACAATTCCCTCAAGATCCTCTACACCGTCAAGGTCTACGGCAAGATCTTCAACACCAACTGGCAGACCTACCGTGCCTCCACCCAAATCTGTATCAAGAGCATCAACACCAACTCGTCGACCATCCATGCCATCCAATACACCTACTATATCAGCTCCTACATCAAAGCCCTCTCCTTCAGTTTCGAAGCCAGTTCCCTCAGCAACAAGAAATCCAGTGCCATCACGTGGCGCATCGCCGACAGTGAAATCTAGACCATGGAAGCCCTCGGAAATGCCTGGTTTCTCGATGGATGCCCCACCAAATTTAAGGACAACACTTCCTGATAGACCACTTTCAGCTTCTAGAGGTAGGCCAGGAGCACCCAGCTCTAGATCTTCTTCCATTGAGCCTGGTCCTCCTGGAAGACCAAGAAGGCAATCATGCTCTCCCTCAAGAGGAAGGGCTCCCAATGGCAGTACTCATATAAGTGGGAGCTCTGTTCCTGCATTCAGTCGTGGGCATTCTAAAGTTAATGACAATGTGAGCCCTGTTTTAATGGGAACAAAAATGGTTGAGCGGGTAATAAATATGCGGAAACTGGCGCCCCCCAAGCACGATGACAAACAATCTCCTCATGGGAACCACTCTGGGAAGTCATCGTCATCCCCAGACAGTTCAGGCTTTGGTAGATCACTCTCAAAGAAGTCCCTTGATATGGCTATACGTCACATGGATATAAGGCGAAGCATTCCTGGTAATTTGCGGCCGTTGATGACAAATATTCCTGCATCCTCTATGTACAGTGTGAGATCAGGGCCTGCACGAAGCAGAACGGTTAGTGTTTCAGATTCTCCTCTTGCCACCAGCAGTAATGCTAGCTCTGAAGTCAGTGTAAACAACAATGGCCTTTGTTTAGATGTGAGTGGAGTAGAAGATGATATTGGCAGTGAGAGAGGTGGTCGATCTCCTGCCAGTGTGCATGGTAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

512

Amino Acids

54.13

Weight (kDa)

11.15

Isoelectric Point (pI)

76.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004334)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40070 AT2G40070 AT2G40070
fragaria_vesca	FvH4_7g24310 FvH4_7g24310 FvH4_7g24320 FvH4_7g24320
malus_domestica	MD01G1132400.v1.1 MD07G1220000.v1.1 MD07G1220200.v1.1
prunus_persica	Prupe.2G248600_v2.0.a1 Prupe.2G248600_v2.0.a1
pyrus_communis	pycom01g16900 pycom07g19910
rosa_chinensis	RchiOBHm_Chr1g0369941 RchiOBHm_Chr1g0369981
rosa_laevigata	RLG00000027081 RLG00000027086
rosa_multiflora	Rmu_co8421201.1_g000001 Rmu_co8476543.1_g000001 Rmu_sc0008140.1_g000014 Rmu_sc0008140.1_g000020
rosa_roxburghii	Rroxscaffold_4G00286910 Rroxscaffold_4G00287130
rosa_rugosa	Rorug01G0352900
rosa_samantha	Rh1AG361700 Rh1AG361800 Rh1BG325000 Rh1CG338200 Rh1CG338300 Rh1DG355400
rosa_wichuraiana	Rw1G031830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	250
Acc36I	ACCTGC	2 cut(s)	250, 400
AccB1I	GGYRCC	2 cut(s)	238, 1150
AccB7I	CCANNNNNTGG	1 cut(s)	794
AccBSI	CCGCTC	1 cut(s)	1126
AccI	GTMKAC	2 cut(s)	602, 685
AccIII	TCCGGA	1 cut(s)	354
AciI	CCGC	4 cut(s)	525, 1126, 1141, 1312
AclWI	GGATC	2 cut(s)	391, 576
AcoI	YGGCCR	1 cut(s)	1313
AcsI	RAATTY	1 cut(s)	871
AcuI	CTGAAG	4 cut(s)	186, 408, 729, 1452
AcvI	CACGTG	1 cut(s)	794
AcyI	GRCGYC	2 cut(s)	409, 1151
AfaI	GTAC	2 cut(s)	1027, 1349
AfiI	CCNNNNNNNGG	5 cut(s)	78, 354, 794, 1004, 1264
AgsI	TTSAA	2 cut(s)	441, 618
AjnI	CCWGG	7 cut(s)	379, 532, 844, 922, 958, 967, 1300
AjuI	GAANNNNNNNTTGG	2 cut(s)	1473, 1505
Alw21I	GWGCWC	2 cut(s)	931, 1046
AlwI	GGATC	2 cut(s)	391, 576
AlwNI	CAGNNNCTG	1 cut(s)	1367
Ama87I	CYCGRG	1 cut(s)	462
Aor13HI	TCCGGA	1 cut(s)	354
AoxI	GGCC	6 cut(s)	69, 359, 920, 1313, 1364, 1453
ApeKI	GCWGC	4 cut(s)	58, 61, 317, 494
ApoI	RAATTY	1 cut(s)	871
AspLEI	GCGC	3 cut(s)	181, 800, 1153
AspS9I	GGNCC	5 cut(s)	69, 360, 377, 962, 1364
AsuC2I	CCSGG	1 cut(s)	198
AsuII	TTCGAA	1 cut(s)	752
AsuNHI	GCTAGC	1 cut(s)	1424
AvaI	CYCGRG	1 cut(s)	462
AvaII	GGWCC	2 cut(s)	377, 962
BanI	GGYRCC	2 cut(s)	238, 1150
BanII	GRGCYC	4 cut(s)	22, 1015, 1046, 1097
BbrPI	CACGTG	1 cut(s)	794
BbsI	GAAGAC	1 cut(s)	979
Bbv12I	GWGCWC	2 cut(s)	931, 1046
BbvCI	CCTCAGC	1 cut(s)	766
BbvI	GCAGC	4 cut(s)	70, 73, 304, 506
BccI	CCATC	4 cut(s)	697, 706, 796, 850
BceAI	ACGGC	2 cut(s)	621, 1300
BciT130I	CCWGG	7 cut(s)	381, 534, 846, 924, 960, 969, 1302
BciVI	GTATCC	1 cut(s)	362
BcnI	CCSGG	1 cut(s)	198
BfaI	CTAG	5 cut(s)	113, 819, 912, 939, 1425
BfmI	CTRYAG	1 cut(s)	492
BfoI	RGCGCY	1 cut(s)	1154
BfuAI	ACCTGC	2 cut(s)	250, 400
BfuI	GTATCC	1 cut(s)	362
BglII	AGATCT	2 cut(s)	611, 941
BisI	GCNGC	5 cut(s)	59, 62, 318, 495, 1313
BlsI	GCNGC	5 cut(s)	60, 63, 319, 496, 1314
BmcAI	AGTACT	1 cut(s)	1027
Bme1390I	CCNGG	8 cut(s)	198, 381, 534, 846, 924, 960, 969, 1302
Bme18I	GGWCC	2 cut(s)	377, 962
BmeT110I	CYCGRG	1 cut(s)	462
BmgT120I	GGNCC	5 cut(s)	69, 360, 377, 962, 1364
BmiI	GGNNCC	6 cut(s)	240, 346, 378, 1014, 1152, 1190
BmrFI	CCNGG	8 cut(s)	198, 381, 534, 846, 924, 960, 969, 1302
BmsI	GCATC	5 cut(s)	166, 677, 809, 850, 1346
BmtI	GCTAGC	1 cut(s)	1428
BpiI	GAAGAC	1 cut(s)	979
BpmI	CTGGAG	1 cut(s)	276
Bpu10I	CCTNAGC	3 cut(s)	21, 65, 766
Bpu14I	TTCGAA	1 cut(s)	752
BpuEI	CTTGAG	2 cut(s)	562, 985
BpuMI	CCSGG	1 cut(s)	198
BsaAI	YACGTR	1 cut(s)	794
BsaHI	GRCGYC	2 cut(s)	409, 1151
BsaJI	CCNNGG	4 cut(s)	483, 532, 824, 834
BsaWI	WCCGGW	1 cut(s)	354
BsaXI	ACNNNNNCTCC	4 cut(s)	412, 442, 628, 658
Bsc4I	CCNNNNNNNGG	5 cut(s)	78, 354, 794, 1004, 1264
Bse118I	RCCGGY	2 cut(s)	235, 347
Bse1I	ACTGG	7 cut(s)	259, 409, 631, 758, 782, 1152, 1521
BseAI	TCCGGA	1 cut(s)	354
BseBI	CCWGG	7 cut(s)	381, 534, 846, 924, 960, 969, 1302
BseDI	CCNNGG	4 cut(s)	483, 532, 824, 834
BseGI	GGATG	5 cut(s)	689, 698, 865, 1211, 1337
BseLI	CCNNNNNNNGG	5 cut(s)	78, 354, 794, 1004, 1264
BseMII	CTCAG	4 cut(s)	35, 79, 519, 780
BseNI	ACTGG	7 cut(s)	259, 409, 631, 758, 782, 1152, 1521
BseRI	GAGGAG	2 cut(s)	1170, 1392
BseX3I	CGGCCG	1 cut(s)	1313
BseXI	GCAGC	4 cut(s)	70, 73, 304, 506
BseYI	CCCAGC	1 cut(s)	932
BsgI	GTGCAG	2 cut(s)	228, 1353
Bsh1285I	CGRYCG	1 cut(s)	1316
BshFI	GGCC	6 cut(s)	71, 361, 922, 1315, 1366, 1455
BshNI	GGYRCC	2 cut(s)	238, 1150
BsiEI	CGRYCG	1 cut(s)	1316
BsiHKAI	GWGCWC	2 cut(s)	931, 1046
BsiHKCI	CYCGRG	1 cut(s)	462
BsiSI	CCGG	4 cut(s)	198, 236, 348, 355
BslFI	GGGAC	1 cut(s)	1240
BslI	CCNNNNNNNGG	5 cut(s)	78, 354, 794, 1004, 1264
BsmFI	GGGAC	1 cut(s)	1240
BsmI	GAATGC	3 cut(s)	1055, 1069, 1296
BsnI	GGCC	6 cut(s)	71, 361, 922, 1315, 1366, 1455
BsoBI	CYCGRG	1 cut(s)	462
Bsp119I	TTCGAA	1 cut(s)	752
Bsp1286I	GDGCHC	5 cut(s)	22, 931, 1015, 1046, 1097
Bsp13I	TCCGGA	1 cut(s)	354
Bsp1407I	TGTACA	1 cut(s)	1347
Bsp143I	GATC	9 cut(s)	145, 383, 443, 581, 611, 941, 1238, 1358, 1511
Bsp19I	CCATGG	1 cut(s)	824
BspACI	CCGC	4 cut(s)	525, 1126, 1141, 1312
BspANI	GGCC	6 cut(s)	71, 361, 922, 1315, 1366, 1455
BspCNI	CTCAG	4 cut(s)	34, 78, 518, 779
BspEI	TCCGGA	1 cut(s)	354
BspLI	GGNNCC	6 cut(s)	240, 346, 378, 1014, 1152, 1190
BspMAI	CTGCAG	1 cut(s)	496
BspMI	ACCTGC	2 cut(s)	250, 400
BspOI	GCTAGC	1 cut(s)	1428
BspPI	GGATC	2 cut(s)	391, 576
BspQI	GCTCTTC	1 cut(s)	90
BspT104I	TTCGAA	1 cut(s)	752
BspT107I	GGYRCC	2 cut(s)	238, 1150
BsrBI	CCGCTC	1 cut(s)	1126
BsrFI	RCCGGY	2 cut(s)	235, 347
BsrGI	TGTACA	1 cut(s)	1347
BsrI	ACTGG	7 cut(s)	259, 409, 631, 758, 782, 1152, 1521
BssAI	RCCGGY	2 cut(s)	235, 347
BssECI	CCNNGG	4 cut(s)	483, 532, 824, 834
BssMI	GATC	9 cut(s)	145, 383, 443, 581, 611, 941, 1238, 1358, 1511
BssNI	GRCGYC	2 cut(s)	409, 1151
BssT1I	CCWWGG	1 cut(s)	824
Bst2UI	CCWGG	7 cut(s)	381, 534, 846, 924, 960, 969, 1302
Bst4CI	ACNGT	9 cut(s)	161, 418, 487, 594, 640, 811, 1223, 1352, 1384
Bst6I	CTCTTC	3 cut(s)	90, 119, 162
BstACI	GRCGYC	2 cut(s)	409, 1151
BstAUI	TGTACA	1 cut(s)	1347
BstBAI	YACGTR	1 cut(s)	794
BstBI	TTCGAA	1 cut(s)	752
BstC8I	GCNNGC	6 cut(s)	39, 102, 237, 247, 1368, 1426
BstDEI	CTNAG	4 cut(s)	21, 65, 505, 766
BstDSI	CCRYGG	2 cut(s)	483, 824
BstENI	CCTNNNNNAGG	1 cut(s)	76
BstF5I	GGATG	5 cut(s)	689, 698, 865, 1211, 1337
BstH2I	RGCGCY	1 cut(s)	1154
BstHHI	GCGC	3 cut(s)	181, 800, 1153
BstKTI	GATC	9 cut(s)	148, 386, 446, 584, 614, 944, 1241, 1361, 1514
BstMBI	GATC	9 cut(s)	145, 383, 443, 581, 611, 941, 1238, 1358, 1511
BstMCI	CGRYCG	1 cut(s)	1316
BstMWI	GCNNNNNNNGC	2 cut(s)	58, 1159
BstNI	CCWGG	7 cut(s)	381, 534, 846, 924, 960, 969, 1302
BstSCI	CCNGG	8 cut(s)	196, 379, 532, 844, 922, 958, 967, 1300
BstSFI	CTRYAG	1 cut(s)	492
BstV1I	GCAGC	4 cut(s)	70, 73, 304, 506
BstV2I	GAAGAC	1 cut(s)	979
BstX2I	RGATCY	3 cut(s)	581, 611, 941
BstYI	RGATCY	3 cut(s)	581, 611, 941
BstZI	CGGCCG	1 cut(s)	1313
BsuI	GTATCC	1 cut(s)	362
BsuRI	GGCC	6 cut(s)	71, 361, 922, 1315, 1366, 1455
BtgI	CCRYGG	2 cut(s)	483, 824
BtgZI	GCGATG	2 cut(s)	56, 786
BtsCI	GGATG	5 cut(s)	689, 698, 865, 1211, 1337
BtsI	GCAGTG	1 cut(s)	1501
BtsIMutI	CAGTG	7 cut(s)	423, 789, 816, 1357, 1444, 1501, 1528
BveI	ACCTGC	2 cut(s)	250, 400
Cac8I	GCNNGC	6 cut(s)	39, 102, 237, 247, 1368, 1426
CaiI	CAGNNNCTG	1 cut(s)	1367
CfoI	GCGC	3 cut(s)	181, 800, 1153
Cfr10I	RCCGGY	2 cut(s)	235, 347
Cfr13I	GGNCC	5 cut(s)	69, 360, 377, 962, 1364
CseI	GACGC	1 cut(s)	417
Csp6I	GTAC	2 cut(s)	1026, 1348
CviAII	CATG	6 cut(s)	694, 825, 990, 1184, 1279, 1529
CviQI	GTAC	2 cut(s)	1026, 1348
DdeI	CTNAG	4 cut(s)	21, 65, 505, 766
DinI	GGCGCC	1 cut(s)	1152
DpnI	GATC	9 cut(s)	147, 385, 445, 583, 613, 943, 1240, 1360, 1513
DpnII	GATC	9 cut(s)	145, 383, 443, 581, 611, 941, 1238, 1358, 1511
EaeI	YGGCCR	1 cut(s)	1313
EagI	CGGCCG	1 cut(s)	1313
Eam1104I	CTCTTC	3 cut(s)	90, 119, 162
EarI	CTCTTC	3 cut(s)	90, 119, 162
Ecl136II	GAGCTC	1 cut(s)	1044
EclXI	CGGCCG	1 cut(s)	1313
Eco130I	CCWWGG	1 cut(s)	824
Eco24I	GRGCYC	4 cut(s)	22, 1015, 1046, 1097
Eco47I	GGWCC	2 cut(s)	377, 962
Eco52I	CGGCCG	1 cut(s)	1313
Eco53kI	GAGCTC	1 cut(s)	1044
Eco57I	CTGAAG	4 cut(s)	186, 408, 729, 1452
Eco72I	CACGTG	1 cut(s)	794
Eco88I	CYCGRG	1 cut(s)	462
EcoICRI	GAGCTC	1 cut(s)	1044
EcoNI	CCTNNNNNAGG	1 cut(s)	76
EcoO109I	RGGNCCY	3 cut(s)	69, 360, 1364
EcoRII	CCWGG	7 cut(s)	379, 532, 844, 922, 958, 967, 1300
EcoT14I	CCWWGG	1 cut(s)	824
EcoT38I	GRGCYC	4 cut(s)	22, 1015, 1046, 1097
EgeI	GGCGCC	1 cut(s)	1152
EheI	GGCGCC	1 cut(s)	1152
ErhI	CCWWGG	1 cut(s)	824
FaeI	CATG	6 cut(s)	697, 828, 993, 1187, 1282, 1532
FaqI	GGGAC	1 cut(s)	1240
FatI	CATG	6 cut(s)	693, 824, 989, 1183, 1278, 1528
FauI	CCCGC	1 cut(s)	1119
FblI	GTMKAC	2 cut(s)	602, 685
Fnu4HI	GCNGC	5 cut(s)	59, 62, 318, 495, 1313
FokI	GGATG	5 cut(s)	676, 685, 872, 1198, 1324
FriOI	GRGCYC	4 cut(s)	22, 1015, 1046, 1097
Fsp4HI	GCNGC	5 cut(s)	59, 62, 318, 495, 1313
FspBI	CTAG	5 cut(s)	113, 819, 912, 939, 1425
GlaI	GCGC	3 cut(s)	180, 799, 1152
GluI	GCNGC	5 cut(s)	59, 62, 318, 495, 1313
GsaI	CCCAGC	1 cut(s)	936
GsuI	CTGGAG	1 cut(s)	276
HaeII	RGCGCY	1 cut(s)	1154
HaeIII	GGCC	6 cut(s)	71, 361, 922, 1315, 1366, 1455
HapII	CCGG	4 cut(s)	198, 236, 348, 355
HgaI	GACGC	1 cut(s)	417
HhaI	GCGC	3 cut(s)	181, 800, 1153
Hin1I	GRCGYC	2 cut(s)	409, 1151
Hin1II	CATG	6 cut(s)	697, 828, 993, 1187, 1282, 1532
Hin6I	GCGC	3 cut(s)	179, 798, 1151
HinP1I	GCGC	3 cut(s)	179, 798, 1151
HincII	GTYRAC	2 cut(s)	450, 686
HindII	GTYRAC	2 cut(s)	450, 686
HinfI	GANTC	3 cut(s)	4, 26, 1397
HpaII	CCGG	4 cut(s)	198, 236, 348, 355
Hpy166II	GTNNAC	5 cut(s)	450, 483, 603, 686, 1444
Hpy188I	TCNGA	7 cut(s)	9, 166, 280, 330, 838, 1396, 1432
Hpy8I	GTNNAC	5 cut(s)	450, 483, 603, 686, 1444
Hpy99I	CGWCG	1 cut(s)	687
HpyAV	CCTTC	7 cut(s)	76, 82, 127, 447, 753, 975, 1002
HpyCH4III	ACNGT	9 cut(s)	161, 418, 487, 594, 640, 811, 1223, 1352, 1384
HpyCH4IV	ACGT	2 cut(s)	793, 1273
HpyCH4V	TGCA	9 cut(s)	37, 245, 395, 494, 557, 1055, 1337, 1370, 1528
HpyF10VI	GCNNNNNNNGC	2 cut(s)	58, 1159
HpyF3I	CTNAG	4 cut(s)	21, 65, 505, 766
HpySE526I	ACGT	2 cut(s)	793, 1273
Hsp92I	GRCGYC	2 cut(s)	409, 1151
Hsp92II	CATG	6 cut(s)	697, 828, 993, 1187, 1282, 1532
HspAI	GCGC	3 cut(s)	179, 798, 1151
KasI	GGCGCC	1 cut(s)	1150
Kpn2I	TCCGGA	1 cut(s)	354
KroI	GCCGGC	1 cut(s)	235
KroNI	GCCGGC	1 cut(s)	237
Kzo9I	GATC	9 cut(s)	145, 383, 443, 581, 611, 941, 1238, 1358, 1511
LguI	GCTCTTC	1 cut(s)	90
LmnI	GCTCC	7 cut(s)	257, 344, 433, 727, 926, 1018, 1041
Lsp1109I	GCAGC	4 cut(s)	70, 73, 304, 506
LweI	GCATC	5 cut(s)	166, 677, 809, 850, 1346
MaeI	CTAG	5 cut(s)	113, 819, 912, 939, 1425
MaeII	ACGT	2 cut(s)	793, 1273
MaeIII	GTNAC	2 cut(s)	418, 1274
MalI	GATC	9 cut(s)	147, 385, 445, 583, 613, 943, 1240, 1360, 1513
MbiI	CCGCTC	1 cut(s)	1126
MboI	GATC	9 cut(s)	145, 383, 443, 581, 611, 941, 1238, 1358, 1511
MflI	RGATCY	3 cut(s)	581, 611, 941
MhlI	GDGCHC	5 cut(s)	22, 931, 1015, 1046, 1097
MluCI	AATT	6 cut(s)	274, 516, 549, 570, 871, 1306
Mly113I	GGCGCC	1 cut(s)	1151
MlyI	GAGTC	1 cut(s)	35
MroI	TCCGGA	1 cut(s)	354
MroNI	GCCGGC	1 cut(s)	235
MseI	TTAA	6 cut(s)	216, 473, 519, 875, 1080, 1103
MslI	CAYNNNNRTG	1 cut(s)	1035
MspI	CCGG	4 cut(s)	198, 236, 348, 355
MspR9I	CCNGG	8 cut(s)	198, 381, 534, 846, 924, 960, 969, 1302
Mva1269I	GAATGC	3 cut(s)	1055, 1069, 1296
MvaI	CCWGG	7 cut(s)	381, 534, 846, 924, 960, 969, 1302
MwoI	GCNNNNNNNGC	2 cut(s)	58, 1159
NaeI	GCCGGC	1 cut(s)	237
NarI	GGCGCC	1 cut(s)	1151
NciI	CCSGG	1 cut(s)	198
NcoI	CCATGG	1 cut(s)	824
NdeII	GATC	9 cut(s)	145, 383, 443, 581, 611, 941, 1238, 1358, 1511
NgoMIV	GCCGGC	1 cut(s)	235
NheI	GCTAGC	1 cut(s)	1424
NlaIII	CATG	6 cut(s)	697, 828, 993, 1187, 1282, 1532
NlaIV	GGNNCC	6 cut(s)	240, 346, 378, 1014, 1152, 1190
NmuCI	GTSAC	2 cut(s)	418, 1274
NspV	TTCGAA	1 cut(s)	752
PaeR7I	CTCGAG	1 cut(s)	462
PaqCI	CACCTGC	1 cut(s)	250
PciSI	GCTCTTC	1 cut(s)	90
PctI	GAATGC	3 cut(s)	1055, 1069, 1296
PdiI	GCCGGC	1 cut(s)	237
PfeI	GAWTC	2 cut(s)	4, 1397
PflMI	CCANNNNNTGG	1 cut(s)	794
PfoI	TCCNGGA	2 cut(s)	379, 967
PkrI	GCNGC	5 cut(s)	60, 63, 319, 496, 1314
PleI	GAGTC	1 cut(s)	34
PluTI	GGCGCC	1 cut(s)	1154
PmaCI	CACGTG	1 cut(s)	794
PmlI	CACGTG	1 cut(s)	794
PpsI	GAGTC	1 cut(s)	34
Ppu21I	YACGTR	1 cut(s)	794
Psp124BI	GAGCTC	1 cut(s)	1046
Psp6I	CCWGG	7 cut(s)	379, 532, 844, 922, 958, 967, 1300
PspCI	CACGTG	1 cut(s)	794
PspFI	CCCAGC	1 cut(s)	932
PspGI	CCWGG	7 cut(s)	379, 532, 844, 922, 958, 967, 1300
PspN4I	GGNNCC	6 cut(s)	240, 346, 378, 1014, 1152, 1190
PspPI	GGNCC	5 cut(s)	69, 360, 377, 962, 1364
PstI	CTGCAG	1 cut(s)	496
PstNI	CAGNNNCTG	1 cut(s)	1367
PsuI	RGATCY	3 cut(s)	581, 611, 941
RsaI	GTAC	2 cut(s)	1027, 1349
RsaNI	GTAC	2 cut(s)	1026, 1348
RseI	CAYNNNNRTG	1 cut(s)	1035
SacI	GAGCTC	1 cut(s)	1046
SalI	GTCGAC	1 cut(s)	684
SapI	GCTCTTC	1 cut(s)	90
SaqAI	TTAA	6 cut(s)	216, 473, 519, 875, 1080, 1103
SatI	GCNGC	5 cut(s)	59, 62, 318, 495, 1313
Sau3AI	GATC	9 cut(s)	145, 383, 443, 581, 611, 941, 1238, 1358, 1511
Sau96I	GGNCC	5 cut(s)	69, 360, 377, 962, 1364
ScaI	AGTACT	1 cut(s)	1027
SchI	GAGTC	1 cut(s)	35
ScrFI	CCNGG	8 cut(s)	198, 381, 534, 846, 924, 960, 969, 1302
SduI	GDGCHC	5 cut(s)	22, 931, 1015, 1046, 1097
SfaNI	GCATC	5 cut(s)	166, 677, 809, 850, 1346
SfcI	CTRYAG	1 cut(s)	492
SfoI	GGCGCC	1 cut(s)	1152
Sfr274I	CTCGAG	1 cut(s)	462
SfuI	TTCGAA	1 cut(s)	752
SinI	GGWCC	2 cut(s)	377, 962
SlaI	CTCGAG	1 cut(s)	462
SmiMI	CAYNNNNRTG	1 cut(s)	1035
SmlI	CTYRAG	3 cut(s)	462, 577, 1000
SmoI	CTYRAG	3 cut(s)	462, 577, 1000
Sse9I	AATT	6 cut(s)	274, 516, 549, 570, 871, 1306
SsiI	CCGC	4 cut(s)	525, 1126, 1141, 1312
SspDI	GGCGCC	1 cut(s)	1150
SspI	AATATT	1 cut(s)	1330
SspMI	CTAG	5 cut(s)	113, 819, 912, 939, 1425
SstI	GAGCTC	1 cut(s)	1046
StyD4I	CCNGG	8 cut(s)	196, 379, 532, 844, 922, 958, 967, 1300
StyI	CCWWGG	1 cut(s)	824
TaaI	ACNGT	9 cut(s)	161, 418, 487, 594, 640, 811, 1223, 1352, 1384
TaiI	ACGT	2 cut(s)	796, 1276
TaqI	TCGA	6 cut(s)	463, 512, 685, 752, 854, 1510
TasI	AATT	6 cut(s)	274, 516, 549, 570, 871, 1306
TatI	WGTACW	2 cut(s)	1025, 1347
TauI	GCSGC	1 cut(s)	1315
TfiI	GAWTC	2 cut(s)	4, 1397
Tru1I	TTAA	6 cut(s)	216, 473, 519, 875, 1080, 1103
Tru9I	TTAA	6 cut(s)	216, 473, 519, 875, 1080, 1103
TscAI	CASTG	7 cut(s)	423, 789, 816, 1357, 1444, 1501, 1528
TseFI	GTSAC	2 cut(s)	418, 1274
TseI	GCWGC	4 cut(s)	58, 61, 317, 494
Tsp45I	GTSAC	2 cut(s)	418, 1274
TspDTI	ATGAA	3 cut(s)	17, 62, 134
TspRI	CASTG	7 cut(s)	423, 789, 816, 1357, 1444, 1501, 1528
Van91I	CCANNNNNTGG	1 cut(s)	794
VpaK11BI	GGWCC	2 cut(s)	377, 962
XagI	CCTNNNNNAGG	1 cut(s)	76
XapI	RAATTY	1 cut(s)	871
XbaI	TCTAGA	4 cut(s)	112, 818, 911, 938
XhoI	CTCGAG	1 cut(s)	462
XmiI	GTMKAC	2 cut(s)	602, 685
XspI	CTAG	5 cut(s)	113, 819, 912, 939, 1425
ZrmI	AGTACT	1 cut(s)	1027

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.