Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0004334

Physical Location & Seq

Genomic Coordinates Reverse (-)

60042062 .. 60046217

Gene Structure 4156 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G031830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGAATCGGAGTTTTAGGGCTCAGGAGTCGCAAATGCAGGCGATGATGAAGCAGAGGCAGCAGCTCAGGGCCTCAATGAGGAAGGAGAAGGAAGAAGAGCTGGCTTTGTTTCTAGAGATGAAGAAGAGGGAGAAGGAAAGGAACGATCTTCTTCTCAATAGTTCTGAAGAGTTCGATGCGCCATTAGGGGCTAAACCCGGAACTTCTCCCATTTTTAATATATCCTCATCAACGCCGGCGCCTGCACGCAAGACTGGAGCTGATGATTTTCTCAATTCTGAGAATGATAAGAATGACTATGATTGGCTTTTAACTCCGCCTGGGACTCCTCTTTTCCCTTCATTGGAAATGGAATCACATAAGACCATGATGAGTCAGCTTGGAACCCCAAAGGCACGTCCGACTGCACTCAAATCTAGACTAGCAAACCCCCAGCCAGAGCCTGCTGCTAGGAGCAACTTAGTACCTAAACAATCAGCTTCTTCCCCTGGTTTGAATTCTTCAAGTTCAGGTATCCGGAGGCCCTCATCATCTGGGGGTCCAGGATCAAGACCTGCAACACCAACTGGACGCTCCACAGTGACTTCAGCTCCTAAACCTTCAAGATCGTCAACACCTACTTCTCGAGCAACATTAACCAAGTCCACGGTTTCTGCAGCCAAGCCCTCAGTTTCGACAATTAAATCTGCAATCCCTGGAACTAAATCCACAATTCCTGCAACTAAATCTACAATTCCCTCAAGATCCTCTACACCGTCAAGGTCTACGGCAAGATCTTCAACACCAACTGGCAGACCTACCGTGCCCCCACCCAAATCTGTGTCAAGAGCTTCAACACCAACTCGTCGACCGTCCATGCCATCCAATACACCTAGTATATCAGCTCCTACATCAAAGCCCTCTCCTTCAGTTTCGAAGCCAGTTCCCTCAGCAACAAGAAATCCAGTGCCATCACGCGGCGCATCGCCAACAGTGAAATCTAGACCATGGAAGCCCTCGGAAATGCCTGGTTTCTCGATGGATGCCCCACCAAATTTAAGGACAACACTTCCTGATAGACCACTTTCAGCTTCTAGAGGTAGGCCAGGAGCACCCAGCTCTAGATCTTCTTCCATTGAGCCTGGTCCTCCTGGAAGACCAAGAAGGCAATCATGCTCTCCCTCAAGAGGAAGGGCTCCCAATGGCAGTACTCATATAAGTGGGAGCTCTGTTCCTGCATTCAGTCGTGGGCATTCTAAAGTTAATGACAATGTGAGCCCTGTTTTAATGGGAACAAAAATGGTTGAGCGGGTAATAAATATGCGGAAACTGGCGCCCCCCAAGCACGATGACAAACAATCTCCTCATGGGAACCACTCTGGGAAGTCATCGTCATCCCCGGACAGTTCAGGCTTTGGTAGATCACTATCAAAGAAATCCCTTGATATGGCTATACGTCACATGGATATAAGGCGAAGCATTCCTGGTAATTTGCGGCCGTTGATGACAAATATTCCTGCATCCTCTATGTACAGTGTGAGATCAGGGCCTGCACGAAGCAGAACGGTTAGTGTTTCAGATTCTCCTCTTGCGACCAGCAGTAATGCTAGCTCTGAAGTCAGTGTAAACAACAATGGCCTTTGTTTAGATGTGAGTGGAGTAGAAGATGATATTGGCAGTGAGAGAGGTGGTCGATCTCCTGCCAGTGTGCATGGTAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

566

Amino Acids

59.87

Weight (kDa)

11.31

Isoelectric Point (pI)

80.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004334)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40070 AT2G40070 AT2G40070
fragaria_vesca	FvH4_7g24310 FvH4_7g24310 FvH4_7g24320 FvH4_7g24320
malus_domestica	MD01G1132400.v1.1 MD07G1220000.v1.1 MD07G1220200.v1.1
prunus_persica	Prupe.2G248600_v2.0.a1 Prupe.2G248600_v2.0.a1
pyrus_communis	pycom01g16900 pycom07g19910
rosa_chinensis	RchiOBHm_Chr1g0369941 RchiOBHm_Chr1g0369981
rosa_laevigata	RLG00000027081 RLG00000027086
rosa_multiflora	Rmu_co8421201.1_g000001 Rmu_co8476543.1_g000001 Rmu_sc0008140.1_g000014 Rmu_sc0008140.1_g000020
rosa_roxburghii	Rroxscaffold_4G00286910 Rroxscaffold_4G00287130
rosa_rugosa	Rorug01G0352900
rosa_samantha	Rh1AG361700 Rh1AG361800 Rh1BG325000 Rh1CG338200 Rh1CG338300 Rh1DG355400
rosa_wichuraiana	Rw1G031830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	562
AccB1I	GGYRCC	2 cut(s)	238, 1312
AccBSI	CCGCTC	1 cut(s)	1288
AccI	GTMKAC	2 cut(s)	764, 847
AccII	CGCG	1 cut(s)	957
AccIII	TCCGGA	1 cut(s)	516
AciI	CCGC	5 cut(s)	317, 957, 1288, 1303, 1474
AclWI	GGATC	2 cut(s)	553, 738
AcoI	YGGCCR	1 cut(s)	1475
AcsI	RAATTY	2 cut(s)	496, 1033
AcuI	CTGAAG	4 cut(s)	186, 570, 891, 1614
AcyI	GRCGYC	2 cut(s)	239, 1313
AfaI	GTAC	3 cut(s)	465, 1189, 1511
AfiI	CCNNNNNNNGG	5 cut(s)	78, 343, 956, 1166, 1426
AgsI	TTSAA	5 cut(s)	496, 504, 603, 780, 834
AjiI	CACGTC	1 cut(s)	398
AjnI	CCWGG	9 cut(s)	319, 487, 541, 694, 1006, 1084, 1120, 1129, 1462
AjuI	GAANNNNNNNTTGG	2 cut(s)	1635, 1667
Alw21I	GWGCWC	2 cut(s)	1093, 1208
AlwI	GGATC	2 cut(s)	553, 738
AlwNI	CAGNNNCTG	2 cut(s)	443, 1529
Ama87I	CYCGRG	1 cut(s)	624
Aor13HI	TCCGGA	1 cut(s)	516
AoxI	GGCC	6 cut(s)	69, 521, 1082, 1475, 1526, 1615
ApeKI	GCWGC	4 cut(s)	58, 61, 446, 656
ApoI	RAATTY	2 cut(s)	496, 1033
AspLEI	GCGC	4 cut(s)	181, 241, 962, 1315
AspS9I	GGNCC	5 cut(s)	69, 522, 539, 1124, 1526
AsuC2I	CCSGG	2 cut(s)	198, 1379
AsuII	TTCGAA	1 cut(s)	914
AsuNHI	GCTAGC	1 cut(s)	1586
AvaI	CYCGRG	1 cut(s)	624
AvaII	GGWCC	2 cut(s)	539, 1124
BaeGI	GKGCMC	1 cut(s)	807
BanI	GGYRCC	2 cut(s)	238, 1312
BanII	GRGCYC	4 cut(s)	22, 1177, 1208, 1259
BbsI	GAAGAC	1 cut(s)	1141
Bbv12I	GWGCWC	2 cut(s)	1093, 1208
BbvCI	CCTCAGC	1 cut(s)	928
BbvI	GCAGC	4 cut(s)	70, 73, 433, 668
BccI	CCATC	3 cut(s)	868, 958, 1012
BceAI	ACGGC	2 cut(s)	783, 1462
BciT130I	CCWGG	9 cut(s)	321, 489, 543, 696, 1008, 1086, 1122, 1131, 1464
BciVI	GTATCC	1 cut(s)	524
BcnI	CCSGG	2 cut(s)	198, 1379
BfaI	CTAG	9 cut(s)	113, 417, 422, 450, 873, 981, 1074, 1101, 1587
BfmI	CTRYAG	1 cut(s)	654
BfoI	RGCGCY	2 cut(s)	242, 1316
BfuAI	ACCTGC	1 cut(s)	562
BfuI	GTATCC	1 cut(s)	524
BglII	AGATCT	2 cut(s)	773, 1103
BisI	GCNGC	6 cut(s)	59, 62, 447, 657, 958, 1475
BlsI	GCNGC	6 cut(s)	60, 63, 448, 658, 959, 1476
BmcAI	AGTACT	1 cut(s)	1189
Bme18I	GGWCC	2 cut(s)	539, 1124
BmeT110I	CYCGRG	1 cut(s)	624
BmgBI	CACGTC	1 cut(s)	398
BmgT120I	GGNCC	5 cut(s)	69, 522, 539, 1124, 1526
BmiI	GGNNCC	6 cut(s)	240, 385, 540, 1176, 1314, 1352
BmsI	GCATC	4 cut(s)	166, 971, 1012, 1508
BmtI	GCTAGC	1 cut(s)	1590
BpiI	GAAGAC	1 cut(s)	1141
BpmI	CTGGAG	1 cut(s)	276
Bpu10I	CCTNAGC	3 cut(s)	21, 65, 928
Bpu14I	TTCGAA	1 cut(s)	914
BpuEI	CTTGAG	2 cut(s)	724, 1147
BpuMI	CCSGG	2 cut(s)	198, 1379
BsaBI	GATNNNNATC	1 cut(s)	1405
BsaHI	GRCGYC	2 cut(s)	239, 1313
BsaJI	CCNNGG	7 cut(s)	320, 487, 645, 694, 986, 996, 1377
BsaWI	WCCGGW	1 cut(s)	516
BsaXI	ACNNNNNCTCC	2 cut(s)	574, 604
Bsc4I	CCNNNNNNNGG	5 cut(s)	78, 343, 956, 1166, 1426
Bse118I	RCCGGY	1 cut(s)	235
Bse1I	ACTGG	7 cut(s)	259, 571, 793, 920, 944, 1314, 1683
Bse8I	GATNNNNATC	1 cut(s)	1405
BseAI	TCCGGA	1 cut(s)	516
BseBI	CCWGG	9 cut(s)	321, 489, 543, 696, 1008, 1086, 1122, 1131, 1464
BseDI	CCNNGG	7 cut(s)	320, 487, 645, 694, 986, 996, 1377
BseGI	GGATG	4 cut(s)	860, 1027, 1373, 1499
BseJI	GATNNNNATC	1 cut(s)	1405
BseLI	CCNNNNNNNGG	5 cut(s)	78, 343, 956, 1166, 1426
BseMII	CTCAG	5 cut(s)	35, 79, 270, 681, 942
BseNI	ACTGG	7 cut(s)	259, 571, 793, 920, 944, 1314, 1683
BseRI	GAGGAG	3 cut(s)	318, 1332, 1554
BseSI	GKGCMC	1 cut(s)	807
BseX3I	CGGCCG	1 cut(s)	1475
BseXI	GCAGC	4 cut(s)	70, 73, 433, 668
BseYI	CCCAGC	2 cut(s)	432, 1094
BsgI	GTGCAG	3 cut(s)	228, 390, 1515
Bsh1236I	CGCG	1 cut(s)	957
Bsh1285I	CGRYCG	2 cut(s)	851, 1478
BshFI	GGCC	6 cut(s)	71, 523, 1084, 1477, 1528, 1617
BshNI	GGYRCC	2 cut(s)	238, 1312
BsiEI	CGRYCG	2 cut(s)	851, 1478
BsiHKAI	GWGCWC	2 cut(s)	1093, 1208
BsiHKCI	CYCGRG	1 cut(s)	624
BsiSI	CCGG	4 cut(s)	198, 236, 517, 1379
BslFI	GGGAC	1 cut(s)	337
BslI	CCNNNNNNNGG	5 cut(s)	78, 343, 956, 1166, 1426
BsmFI	GGGAC	1 cut(s)	337
BsmI	GAATGC	3 cut(s)	1217, 1231, 1458
BsnI	GGCC	6 cut(s)	71, 523, 1084, 1477, 1528, 1617
BsoBI	CYCGRG	1 cut(s)	624
Bsp119I	TTCGAA	1 cut(s)	914
Bsp1286I	GDGCHC	6 cut(s)	22, 807, 1093, 1177, 1208, 1259
Bsp13I	TCCGGA	1 cut(s)	516
Bsp1407I	TGTACA	1 cut(s)	1509
Bsp143I	GATC	9 cut(s)	145, 545, 605, 743, 773, 1103, 1400, 1520, 1673
Bsp19I	CCATGG	1 cut(s)	986
BspACI	CCGC	5 cut(s)	317, 957, 1288, 1303, 1474
BspANI	GGCC	6 cut(s)	71, 523, 1084, 1477, 1528, 1617
BspCNI	CTCAG	5 cut(s)	34, 78, 271, 680, 941
BspEI	TCCGGA	1 cut(s)	516
BspFNI	CGCG	1 cut(s)	957
BspLI	GGNNCC	6 cut(s)	240, 385, 540, 1176, 1314, 1352
BspMAI	CTGCAG	1 cut(s)	658
BspMI	ACCTGC	1 cut(s)	562
BspOI	GCTAGC	1 cut(s)	1590
BspPI	GGATC	2 cut(s)	553, 738
BspQI	GCTCTTC	1 cut(s)	90
BspT104I	TTCGAA	1 cut(s)	914
BspT107I	GGYRCC	2 cut(s)	238, 1312
BsrBI	CCGCTC	1 cut(s)	1288
BsrFI	RCCGGY	1 cut(s)	235
BsrGI	TGTACA	1 cut(s)	1509
BsrI	ACTGG	7 cut(s)	259, 571, 793, 920, 944, 1314, 1683
BssAI	RCCGGY	1 cut(s)	235
BssECI	CCNNGG	7 cut(s)	320, 487, 645, 694, 986, 996, 1377
BssMI	GATC	9 cut(s)	145, 545, 605, 743, 773, 1103, 1400, 1520, 1673
BssNI	GRCGYC	2 cut(s)	239, 1313
BssT1I	CCWWGG	1 cut(s)	986
Bst2UI	CCWGG	9 cut(s)	321, 489, 543, 696, 1008, 1086, 1122, 1131, 1464
Bst4CI	ACNGT	9 cut(s)	580, 649, 756, 802, 852, 973, 1385, 1514, 1546
Bst6I	CTCTTC	3 cut(s)	90, 119, 162
BstACI	GRCGYC	2 cut(s)	239, 1313
BstAUI	TGTACA	1 cut(s)	1509
BstBI	TTCGAA	1 cut(s)	914
BstC8I	GCNNGC	8 cut(s)	39, 102, 237, 243, 247, 444, 1530, 1588
BstDEI	CTNAG	6 cut(s)	21, 65, 279, 460, 667, 928
BstDSI	CCRYGG	2 cut(s)	645, 986
BstENI	CCTNNNNNAGG	1 cut(s)	76
BstF5I	GGATG	4 cut(s)	860, 1027, 1373, 1499
BstFNI	CGCG	1 cut(s)	957
BstH2I	RGCGCY	2 cut(s)	242, 1316
BstHHI	GCGC	4 cut(s)	181, 241, 962, 1315
BstKTI	GATC	9 cut(s)	148, 548, 608, 746, 776, 1106, 1403, 1523, 1676
BstMBI	GATC	9 cut(s)	145, 545, 605, 743, 773, 1103, 1400, 1520, 1673
BstMCI	CGRYCG	2 cut(s)	851, 1478
BstMWI	GCNNNNNNNGC	2 cut(s)	58, 1321
BstNI	CCWGG	9 cut(s)	321, 489, 543, 696, 1008, 1086, 1122, 1131, 1464
BstSFI	CTRYAG	1 cut(s)	654
BstSLI	GKGCMC	1 cut(s)	807
BstUI	CGCG	1 cut(s)	957
BstV1I	GCAGC	4 cut(s)	70, 73, 433, 668
BstV2I	GAAGAC	1 cut(s)	1141
BstX2I	RGATCY	3 cut(s)	743, 773, 1103
BstYI	RGATCY	3 cut(s)	743, 773, 1103
BstZI	CGGCCG	1 cut(s)	1475
BsuI	GTATCC	1 cut(s)	524
BsuRI	GGCC	6 cut(s)	71, 523, 1084, 1477, 1528, 1617
BtgI	CCRYGG	2 cut(s)	645, 986
BtgZI	GCGATG	2 cut(s)	56, 948
BtrI	CACGTC	1 cut(s)	398
BtsCI	GGATG	4 cut(s)	860, 1027, 1373, 1499
BtsI	GCAGTG	1 cut(s)	1663
BtsIMutI	CAGTG	7 cut(s)	585, 951, 978, 1519, 1606, 1663, 1690
BveI	ACCTGC	1 cut(s)	562
Cac8I	GCNNGC	8 cut(s)	39, 102, 237, 243, 247, 444, 1530, 1588
CaiI	CAGNNNCTG	2 cut(s)	443, 1529
CfoI	GCGC	4 cut(s)	181, 241, 962, 1315
Cfr10I	RCCGGY	1 cut(s)	235
Cfr13I	GGNCC	5 cut(s)	69, 522, 539, 1124, 1526
CseI	GACGC	1 cut(s)	579
Csp6I	GTAC	3 cut(s)	464, 1188, 1510
CviAII	CATG	7 cut(s)	367, 856, 987, 1152, 1346, 1441, 1691
CviQI	GTAC	3 cut(s)	464, 1188, 1510
DdeI	CTNAG	6 cut(s)	21, 65, 279, 460, 667, 928
DinI	GGCGCC	2 cut(s)	240, 1314
DpnI	GATC	9 cut(s)	147, 547, 607, 745, 775, 1105, 1402, 1522, 1675
DpnII	GATC	9 cut(s)	145, 545, 605, 743, 773, 1103, 1400, 1520, 1673
EaeI	YGGCCR	1 cut(s)	1475
EagI	CGGCCG	1 cut(s)	1475
Eam1104I	CTCTTC	3 cut(s)	90, 119, 162
EarI	CTCTTC	3 cut(s)	90, 119, 162
EciI	GGCGGA	1 cut(s)	306
Ecl136II	GAGCTC	1 cut(s)	1206
EclXI	CGGCCG	1 cut(s)	1475
Eco130I	CCWWGG	1 cut(s)	986
Eco24I	GRGCYC	4 cut(s)	22, 1177, 1208, 1259
Eco47I	GGWCC	2 cut(s)	539, 1124
Eco52I	CGGCCG	1 cut(s)	1475
Eco53kI	GAGCTC	1 cut(s)	1206
Eco57I	CTGAAG	4 cut(s)	186, 570, 891, 1614
Eco88I	CYCGRG	1 cut(s)	624
EcoICRI	GAGCTC	1 cut(s)	1206
EcoNI	CCTNNNNNAGG	1 cut(s)	76
EcoO109I	RGGNCCY	3 cut(s)	69, 522, 1526
EcoRI	GAATTC	1 cut(s)	496
EcoRII	CCWGG	9 cut(s)	319, 487, 541, 694, 1006, 1084, 1120, 1129, 1462
EcoT14I	CCWWGG	1 cut(s)	986
EcoT38I	GRGCYC	4 cut(s)	22, 1177, 1208, 1259
EgeI	GGCGCC	2 cut(s)	240, 1314
EheI	GGCGCC	2 cut(s)	240, 1314
ErhI	CCWWGG	1 cut(s)	986
FaeI	CATG	7 cut(s)	370, 859, 990, 1155, 1349, 1444, 1694
FaqI	GGGAC	1 cut(s)	337
FatI	CATG	7 cut(s)	366, 855, 986, 1151, 1345, 1440, 1690
FauI	CCCGC	1 cut(s)	1281
FblI	GTMKAC	2 cut(s)	764, 847
Fnu4HI	GCNGC	6 cut(s)	59, 62, 447, 657, 958, 1475
FokI	GGATG	4 cut(s)	847, 1034, 1360, 1486
FriOI	GRGCYC	4 cut(s)	22, 1177, 1208, 1259
Fsp4HI	GCNGC	6 cut(s)	59, 62, 447, 657, 958, 1475
FspBI	CTAG	9 cut(s)	113, 417, 422, 450, 873, 981, 1074, 1101, 1587
GlaI	GCGC	4 cut(s)	180, 240, 961, 1314
GluI	GCNGC	6 cut(s)	59, 62, 447, 657, 958, 1475
GsaI	CCCAGC	2 cut(s)	436, 1098
GsuI	CTGGAG	1 cut(s)	276
HaeII	RGCGCY	2 cut(s)	242, 1316
HaeIII	GGCC	6 cut(s)	71, 523, 1084, 1477, 1528, 1617
HapII	CCGG	4 cut(s)	198, 236, 517, 1379
HgaI	GACGC	1 cut(s)	579
HhaI	GCGC	4 cut(s)	181, 241, 962, 1315
Hin1I	GRCGYC	2 cut(s)	239, 1313
Hin1II	CATG	7 cut(s)	370, 859, 990, 1155, 1349, 1444, 1694
Hin6I	GCGC	4 cut(s)	179, 239, 960, 1313
HinP1I	GCGC	4 cut(s)	179, 239, 960, 1313
HincII	GTYRAC	2 cut(s)	612, 848
HindII	GTYRAC	2 cut(s)	612, 848
HinfI	GANTC	6 cut(s)	4, 26, 325, 353, 373, 1559
HpaII	CCGG	4 cut(s)	198, 236, 517, 1379
Hpy166II	GTNNAC	5 cut(s)	612, 645, 765, 848, 1606
Hpy188I	TCNGA	7 cut(s)	9, 166, 280, 402, 1000, 1558, 1594
Hpy8I	GTNNAC	5 cut(s)	612, 645, 765, 848, 1606
Hpy99I	CGWCG	1 cut(s)	849
HpyAV	CCTTC	8 cut(s)	76, 82, 127, 348, 609, 915, 1137, 1164
HpyCH4III	ACNGT	9 cut(s)	580, 649, 756, 802, 852, 973, 1385, 1514, 1546
HpyCH4IV	ACGT	2 cut(s)	397, 1435
HpyF10VI	GCNNNNNNNGC	2 cut(s)	58, 1321
HpyF3I	CTNAG	6 cut(s)	21, 65, 279, 460, 667, 928
HpySE526I	ACGT	2 cut(s)	397, 1435
Hsp92I	GRCGYC	2 cut(s)	239, 1313
Hsp92II	CATG	7 cut(s)	370, 859, 990, 1155, 1349, 1444, 1694
HspAI	GCGC	4 cut(s)	179, 239, 960, 1313
KasI	GGCGCC	2 cut(s)	238, 1312
Kpn2I	TCCGGA	1 cut(s)	516
KroI	GCCGGC	1 cut(s)	235
KroNI	GCCGGC	1 cut(s)	237
Kzo9I	GATC	9 cut(s)	145, 545, 605, 743, 773, 1103, 1400, 1520, 1673
LguI	GCTCTTC	1 cut(s)	90
LmnI	GCTCC	8 cut(s)	257, 453, 578, 595, 889, 1088, 1180, 1203
Lsp1109I	GCAGC	4 cut(s)	70, 73, 433, 668
LweI	GCATC	4 cut(s)	166, 971, 1012, 1508
MaeI	CTAG	9 cut(s)	113, 417, 422, 450, 873, 981, 1074, 1101, 1587
MaeII	ACGT	2 cut(s)	397, 1435
MaeIII	GTNAC	2 cut(s)	580, 1436
MalI	GATC	9 cut(s)	147, 547, 607, 745, 775, 1105, 1402, 1522, 1675
MbiI	CCGCTC	1 cut(s)	1288
MboI	GATC	9 cut(s)	145, 545, 605, 743, 773, 1103, 1400, 1520, 1673
MflI	RGATCY	3 cut(s)	743, 773, 1103
MhlI	GDGCHC	6 cut(s)	22, 807, 1093, 1177, 1208, 1259
MluCI	AATT	7 cut(s)	274, 496, 678, 711, 732, 1033, 1468
Mly113I	GGCGCC	2 cut(s)	239, 1313
MlyI	GAGTC	3 cut(s)	35, 319, 382
MmeI	TCCRAC	1 cut(s)	425
MreI	CGCCGGCG	1 cut(s)	235
MroI	TCCGGA	1 cut(s)	516
MroNI	GCCGGC	1 cut(s)	235
MseI	TTAA	7 cut(s)	216, 311, 635, 681, 1037, 1242, 1265
MslI	CAYNNNNRTG	1 cut(s)	1197
MspI	CCGG	4 cut(s)	198, 236, 517, 1379
Mva1269I	GAATGC	3 cut(s)	1217, 1231, 1458
MvaI	CCWGG	9 cut(s)	321, 489, 543, 696, 1008, 1086, 1122, 1131, 1464
MvnI	CGCG	1 cut(s)	957
MwoI	GCNNNNNNNGC	2 cut(s)	58, 1321
NaeI	GCCGGC	1 cut(s)	237
NarI	GGCGCC	2 cut(s)	239, 1313
NciI	CCSGG	2 cut(s)	198, 1379
NcoI	CCATGG	1 cut(s)	986
NdeII	GATC	9 cut(s)	145, 545, 605, 743, 773, 1103, 1400, 1520, 1673
NgoMIV	GCCGGC	1 cut(s)	235
NheI	GCTAGC	1 cut(s)	1586
NlaIII	CATG	7 cut(s)	370, 859, 990, 1155, 1349, 1444, 1694
NlaIV	GGNNCC	6 cut(s)	240, 385, 540, 1176, 1314, 1352
NmuCI	GTSAC	2 cut(s)	580, 1436
NspV	TTCGAA	1 cut(s)	914
PaeR7I	CTCGAG	1 cut(s)	624
PciSI	GCTCTTC	1 cut(s)	90
PctI	GAATGC	3 cut(s)	1217, 1231, 1458
PdiI	GCCGGC	1 cut(s)	237
PfeI	GAWTC	3 cut(s)	4, 353, 1559
PfoI	TCCNGGA	2 cut(s)	541, 1129
PkrI	GCNGC	6 cut(s)	60, 63, 448, 658, 959, 1476
PleI	GAGTC	3 cut(s)	34, 319, 381
PluTI	GGCGCC	2 cut(s)	242, 1316
PpsI	GAGTC	3 cut(s)	34, 319, 381
Psp124BI	GAGCTC	1 cut(s)	1208
Psp6I	CCWGG	9 cut(s)	319, 487, 541, 694, 1006, 1084, 1120, 1129, 1462
PspFI	CCCAGC	2 cut(s)	432, 1094
PspGI	CCWGG	9 cut(s)	319, 487, 541, 694, 1006, 1084, 1120, 1129, 1462
PspN4I	GGNNCC	6 cut(s)	240, 385, 540, 1176, 1314, 1352
PspPI	GGNCC	5 cut(s)	69, 522, 539, 1124, 1526
PstI	CTGCAG	1 cut(s)	658
PstNI	CAGNNNCTG	2 cut(s)	443, 1529
PsuI	RGATCY	3 cut(s)	743, 773, 1103
RsaI	GTAC	3 cut(s)	465, 1189, 1511
RsaNI	GTAC	3 cut(s)	464, 1188, 1510
RseI	CAYNNNNRTG	1 cut(s)	1197
SacI	GAGCTC	1 cut(s)	1208
SalI	GTCGAC	1 cut(s)	846
SapI	GCTCTTC	1 cut(s)	90
SaqAI	TTAA	7 cut(s)	216, 311, 635, 681, 1037, 1242, 1265
SatI	GCNGC	6 cut(s)	59, 62, 447, 657, 958, 1475
Sau3AI	GATC	9 cut(s)	145, 545, 605, 743, 773, 1103, 1400, 1520, 1673
Sau96I	GGNCC	5 cut(s)	69, 522, 539, 1124, 1526
ScaI	AGTACT	1 cut(s)	1189
SchI	GAGTC	3 cut(s)	35, 319, 382
SduI	GDGCHC	6 cut(s)	22, 807, 1093, 1177, 1208, 1259
SfaNI	GCATC	4 cut(s)	166, 971, 1012, 1508
SfcI	CTRYAG	1 cut(s)	654
SfoI	GGCGCC	2 cut(s)	240, 1314
Sfr274I	CTCGAG	1 cut(s)	624
SfuI	TTCGAA	1 cut(s)	914
SgrAI	CRCCGGYG	1 cut(s)	235
SinI	GGWCC	2 cut(s)	539, 1124
SlaI	CTCGAG	1 cut(s)	624
SmiMI	CAYNNNNRTG	1 cut(s)	1197
SmlI	CTYRAG	3 cut(s)	624, 739, 1162
SmoI	CTYRAG	3 cut(s)	624, 739, 1162
Sse9I	AATT	7 cut(s)	274, 496, 678, 711, 732, 1033, 1468
SsiI	CCGC	5 cut(s)	317, 957, 1288, 1303, 1474
SspDI	GGCGCC	2 cut(s)	238, 1312
SspI	AATATT	1 cut(s)	1492
SspMI	CTAG	9 cut(s)	113, 417, 422, 450, 873, 981, 1074, 1101, 1587
SstI	GAGCTC	1 cut(s)	1208
StyI	CCWWGG	1 cut(s)	986
TaaI	ACNGT	9 cut(s)	580, 649, 756, 802, 852, 973, 1385, 1514, 1546
TaiI	ACGT	2 cut(s)	400, 1438
TaqI	TCGA	7 cut(s)	174, 625, 674, 847, 914, 1016, 1672
TasI	AATT	7 cut(s)	274, 496, 678, 711, 732, 1033, 1468
TatI	WGTACW	2 cut(s)	1187, 1509
TauI	GCSGC	2 cut(s)	960, 1477
TfiI	GAWTC	3 cut(s)	4, 353, 1559
Tru1I	TTAA	7 cut(s)	216, 311, 635, 681, 1037, 1242, 1265
Tru9I	TTAA	7 cut(s)	216, 311, 635, 681, 1037, 1242, 1265
TscAI	CASTG	7 cut(s)	585, 951, 978, 1519, 1606, 1663, 1690
TseFI	GTSAC	2 cut(s)	580, 1436
TseI	GCWGC	4 cut(s)	58, 61, 446, 656
Tsp45I	GTSAC	2 cut(s)	580, 1436
TspDTI	ATGAA	4 cut(s)	17, 62, 134, 330
TspRI	CASTG	7 cut(s)	585, 951, 978, 1519, 1606, 1663, 1690
VpaK11BI	GGWCC	2 cut(s)	539, 1124
XagI	CCTNNNNNAGG	1 cut(s)	76
XapI	RAATTY	2 cut(s)	496, 1033
XbaI	TCTAGA	5 cut(s)	112, 416, 980, 1073, 1100
XhoI	CTCGAG	1 cut(s)	624
XmiI	GTMKAC	2 cut(s)	764, 847
XspI	CTAG	9 cut(s)	113, 417, 422, 450, 873, 981, 1074, 1101, 1587
ZrmI	AGTACT	1 cut(s)	1189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.