No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0327181 RchiOBHm_Chr2g0111241 RchiOBHm_Chr2g0159241 RchiOBHm_Chr3g0475201 RchiOBHm_Chr4g0415451 RchiOBHm_Chr4g0423091 RchiOBHm_Chr6g0301911 RchiOBHm_Chr7g0211901 |
| rosa_laevigata | RLG00000002424 RLG00000002665 RLG00000030096 |
| rosa_multiflora | Rmu_sc0001188.1_g000020 Rmu_sc0008092.1_g000009 |
| rosa_roxburghii | Rroxscaffold_159G00433070 Rroxscaffold_1G00021660 Rroxscaffold_2G00080380 Rroxscaffold_3G00249060 Rroxscaffold_4G00310440 Rroxscaffold_4G00325180 Rroxscaffold_5G00342910 Rroxscaffold_5G00385840 Rroxscaffold_7G00195250 |
| rosa_samantha | Rh7CG130100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 206 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 140 |
| AgeI | ACCGGT | 1 cut(s) | 133 |
| AgsI | TTSAA | 2 cut(s) | 56, 206 |
| Alw21I | GWGCWC | 1 cut(s) | 153 |
| Alw26I | GTCTC | 1 cut(s) | 190 |
| Alw44I | GTGCAC | 1 cut(s) | 149 |
| AoxI | GGCC | 1 cut(s) | 14 |
| ApaLI | GTGCAC | 1 cut(s) | 149 |
| ApoI | RAATTY | 1 cut(s) | 206 |
| AsiGI | ACCGGT | 1 cut(s) | 133 |
| AsuC2I | CCSGG | 1 cut(s) | 212 |
| BaeGI | GKGCMC | 1 cut(s) | 153 |
| Bbv12I | GWGCWC | 1 cut(s) | 153 |
| BccI | CCATC | 2 cut(s) | 89, 224 |
| BcnI | CCSGG | 1 cut(s) | 212 |
| BcoDI | GTCTC | 1 cut(s) | 190 |
| BfaI | CTAG | 2 cut(s) | 189, 227 |
| Bme1390I | CCNGG | 1 cut(s) | 212 |
| BmrFI | CCNGG | 1 cut(s) | 212 |
| BpuEI | CTTGAG | 1 cut(s) | 146 |
| BpuMI | CCSGG | 1 cut(s) | 212 |
| BsaWI | WCCGGW | 1 cut(s) | 133 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 140 |
| Bse118I | RCCGGY | 1 cut(s) | 133 |
| BseGI | GGATG | 1 cut(s) | 106 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BseSI | GKGCMC | 1 cut(s) | 153 |
| BshFI | GGCC | 1 cut(s) | 16 |
| BshTI | ACCGGT | 1 cut(s) | 133 |
| BsiHKAI | GWGCWC | 1 cut(s) | 153 |
| BsiSI | CCGG | 2 cut(s) | 134, 212 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BsmAI | GTCTC | 1 cut(s) | 190 |
| BsnI | GGCC | 1 cut(s) | 16 |
| Bsp1286I | GDGCHC | 1 cut(s) | 153 |
| BspANI | GGCC | 1 cut(s) | 16 |
| BsrFI | RCCGGY | 1 cut(s) | 133 |
| BssAI | RCCGGY | 1 cut(s) | 133 |
| Bst4CI | ACNGT | 1 cut(s) | 237 |
| BstF5I | GGATG | 1 cut(s) | 106 |
| BstMAI | GTCTC | 1 cut(s) | 190 |
| BstNSI | RCATGY | 1 cut(s) | 27 |
| BstSCI | CCNGG | 1 cut(s) | 210 |
| BstSLI | GKGCMC | 1 cut(s) | 153 |
| BsuRI | GGCC | 1 cut(s) | 16 |
| BtsCI | GGATG | 1 cut(s) | 106 |
| BtsI | GCAGTG | 1 cut(s) | 151 |
| BtsIMutI | CAGTG | 1 cut(s) | 151 |
| Cfr10I | RCCGGY | 1 cut(s) | 133 |
| CspAI | ACCGGT | 1 cut(s) | 133 |
| CviAII | CATG | 2 cut(s) | 24, 155 |
| CviJI | RGCY | 4 cut(s) | 16, 130, 192, 226 |
| CviKI_1 | RGCY | 4 cut(s) | 16, 130, 192, 226 |
| Eco147I | AGGCCT | 1 cut(s) | 16 |
| EcoRI | GAATTC | 1 cut(s) | 206 |
| FaeI | CATG | 2 cut(s) | 27, 158 |
| FaiI | YATR | 5 cut(s) | 9, 11, 25, 156, 241 |
| FatI | CATG | 2 cut(s) | 23, 154 |
| FokI | GGATG | 1 cut(s) | 113 |
| FspBI | CTAG | 2 cut(s) | 189, 227 |
| HaeIII | GGCC | 1 cut(s) | 16 |
| HapII | CCGG | 2 cut(s) | 134, 212 |
| Hin1II | CATG | 2 cut(s) | 27, 158 |
| HincII | GTYRAC | 1 cut(s) | 87 |
| HindII | GTYRAC | 1 cut(s) | 87 |
| HpaII | CCGG | 2 cut(s) | 134, 212 |
| Hpy166II | GTNNAC | 2 cut(s) | 87, 151 |
| Hpy8I | GTNNAC | 2 cut(s) | 87, 151 |
| HpyCH4III | ACNGT | 1 cut(s) | 237 |
| HpyCH4V | TGCA | 2 cut(s) | 23, 151 |
| Hsp92II | CATG | 2 cut(s) | 27, 158 |
| LpnPI | CCDG | 2 cut(s) | 147, 225 |
| MaeI | CTAG | 2 cut(s) | 189, 227 |
| MfeI | CAATTG | 1 cut(s) | 90 |
| MhlI | GDGCHC | 1 cut(s) | 153 |
| MluCI | AATT | 3 cut(s) | 34, 90, 206 |
| MnlI | CCTC | 4 cut(s) | 6, 27, 104, 131 |
| MspI | CCGG | 2 cut(s) | 134, 212 |
| MspR9I | CCNGG | 1 cut(s) | 212 |
| MunI | CAATTG | 1 cut(s) | 90 |
| NciI | CCSGG | 1 cut(s) | 212 |
| NlaIII | CATG | 2 cut(s) | 27, 158 |
| NspI | RCATGY | 1 cut(s) | 27 |
| PceI | AGGCCT | 1 cut(s) | 16 |
| PfoI | TCCNGGA | 1 cut(s) | 210 |
| PinAI | ACCGGT | 1 cut(s) | 133 |
| ScrFI | CCNGG | 1 cut(s) | 212 |
| SduI | GDGCHC | 1 cut(s) | 153 |
| SetI | ASST | 1 cut(s) | 115 |
| SgrAI | CRCCGGYG | 1 cut(s) | 133 |
| SmlI | CTYRAG | 1 cut(s) | 125 |
| SmoI | CTYRAG | 1 cut(s) | 125 |
| Sse9I | AATT | 3 cut(s) | 34, 90, 206 |
| SseBI | AGGCCT | 1 cut(s) | 16 |
| SspMI | CTAG | 2 cut(s) | 189, 227 |
| StuI | AGGCCT | 1 cut(s) | 16 |
| StyD4I | CCNGG | 1 cut(s) | 210 |
| TaaI | ACNGT | 1 cut(s) | 237 |
| TasI | AATT | 3 cut(s) | 34, 90, 206 |
| TscAI | CASTG | 1 cut(s) | 151 |
| TspRI | CASTG | 1 cut(s) | 151 |
| VneI | GTGCAC | 1 cut(s) | 149 |
| XapI | RAATTY | 1 cut(s) | 206 |
| XceI | RCATGY | 1 cut(s) | 27 |
| XspI | CTAG | 2 cut(s) | 189, 227 |