Zinc finger, ZZ type
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g00570 FvH4_4g00570 |
| malus_domestica | MD04G1005700.v1.1 |
| prunus_persica | Prupe.1G006100_v2.0.a1 Prupe.1G006100_v2.0.a1 Prupe.1G006100_v2.0.a1 Prupe.1G006100_v2.0.a1 |
| pyrus_communis | pycom420g00860 |
| rosa_chinensis | RchiOBHm_Chr4g0386021 |
| rosa_laevigata | RLG00000010180 |
| rosa_multiflora | Rmu_sc0000472.1_g000019 |
| rosa_roxburghii | Rroxscaffold_5G00333780 Rroxscaffold_5G00338450 Rroxscaffold_5G00338750 |
| rosa_rugosa | Rorug03G0306300 Rorug03G0306400 Rorug03G0306400 Rorug03G0306500 |
| rosa_samantha | Rh4AG010100 Rh4BG007100 Rh4CG010800 Rh4DG008200 |
| rosa_wichuraiana | Rw4G000130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 198 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 196 |
| AgsI | TTSAA | 4 cut(s) | 36, 45, 56, 110 |
| AluBI | AGCT | 1 cut(s) | 17 |
| AluI | AGCT | 1 cut(s) | 17 |
| AoxI | GGCC | 1 cut(s) | 198 |
| ApeKI | GCWGC | 1 cut(s) | 71 |
| BalI | TGGCCA | 1 cut(s) | 200 |
| BbvI | GCAGC | 1 cut(s) | 83 |
| BccI | CCATC | 1 cut(s) | 83 |
| BisI | GCNGC | 1 cut(s) | 72 |
| BlsI | GCNGC | 1 cut(s) | 73 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 196 |
| BseGI | GGATG | 1 cut(s) | 75 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 196 |
| BseXI | GCAGC | 1 cut(s) | 83 |
| BshFI | GGCC | 1 cut(s) | 200 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 196 |
| BsnI | GGCC | 1 cut(s) | 200 |
| Bsp143I | GATC | 2 cut(s) | 103, 142 |
| BspANI | GGCC | 1 cut(s) | 200 |
| BssMI | GATC | 2 cut(s) | 103, 142 |
| Bst4CI | ACNGT | 1 cut(s) | 11 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 91 |
| BstC8I | GCNNGC | 1 cut(s) | 159 |
| BstF5I | GGATG | 1 cut(s) | 75 |
| BstKTI | GATC | 2 cut(s) | 106, 145 |
| BstMBI | GATC | 2 cut(s) | 103, 142 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 23, 91 |
| BstNSI | RCATGY | 1 cut(s) | 161 |
| BstV1I | GCAGC | 1 cut(s) | 83 |
| BsuRI | GGCC | 1 cut(s) | 200 |
| BtsCI | GGATG | 1 cut(s) | 75 |
| Cac8I | GCNNGC | 1 cut(s) | 159 |
| CviAII | CATG | 3 cut(s) | 95, 158, 202 |
| CviJI | RGCY | 3 cut(s) | 17, 74, 200 |
| CviKI_1 | RGCY | 3 cut(s) | 17, 74, 200 |
| DpnI | GATC | 2 cut(s) | 105, 144 |
| DpnII | GATC | 2 cut(s) | 103, 142 |
| EaeI | YGGCCR | 1 cut(s) | 198 |
| FaeI | CATG | 3 cut(s) | 98, 161, 205 |
| FaiI | YATR | 5 cut(s) | 96, 159, 203, 207, 223 |
| FatI | CATG | 3 cut(s) | 94, 157, 201 |
| Fnu4HI | GCNGC | 1 cut(s) | 72 |
| FokI | GGATG | 1 cut(s) | 62 |
| Fsp4HI | GCNGC | 1 cut(s) | 72 |
| GluI | GCNGC | 1 cut(s) | 72 |
| HaeIII | GGCC | 1 cut(s) | 200 |
| Hin1II | CATG | 3 cut(s) | 98, 161, 205 |
| Hpy188I | TCNGA | 1 cut(s) | 142 |
| Hpy188III | TCNNGA | 1 cut(s) | 107 |
| HpyCH4III | ACNGT | 1 cut(s) | 11 |
| HpyCH4V | TGCA | 5 cut(s) | 26, 71, 94, 157, 161 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 23, 91 |
| Hsp92II | CATG | 3 cut(s) | 98, 161, 205 |
| Kzo9I | GATC | 2 cut(s) | 103, 142 |
| LpnPI | CCDG | 1 cut(s) | 194 |
| Lsp1109I | GCAGC | 1 cut(s) | 83 |
| MalI | GATC | 2 cut(s) | 105, 144 |
| MboI | GATC | 2 cut(s) | 103, 142 |
| MboII | GAAGA | 1 cut(s) | 33 |
| MfeI | CAATTG | 1 cut(s) | 192 |
| MlsI | TGGCCA | 1 cut(s) | 200 |
| MluCI | AATT | 1 cut(s) | 192 |
| MluNI | TGGCCA | 1 cut(s) | 200 |
| Mox20I | TGGCCA | 1 cut(s) | 200 |
| MscI | TGGCCA | 1 cut(s) | 200 |
| MslI | CAYNNNNRTG | 1 cut(s) | 99 |
| Msp20I | TGGCCA | 1 cut(s) | 200 |
| MunI | CAATTG | 1 cut(s) | 192 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 23, 91 |
| NdeII | GATC | 2 cut(s) | 103, 142 |
| NlaIII | CATG | 3 cut(s) | 98, 161, 205 |
| NspI | RCATGY | 1 cut(s) | 161 |
| PaeI | GCATGC | 1 cut(s) | 161 |
| PkrI | GCNGC | 1 cut(s) | 73 |
| RseI | CAYNNNNRTG | 1 cut(s) | 99 |
| SatI | GCNGC | 1 cut(s) | 72 |
| Sau3AI | GATC | 2 cut(s) | 103, 142 |
| SetI | ASST | 2 cut(s) | 19, 183 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 99 |
| SphI | GCATGC | 1 cut(s) | 161 |
| Sse9I | AATT | 1 cut(s) | 192 |
| SspI | AATATT | 1 cut(s) | 22 |
| TaaI | ACNGT | 1 cut(s) | 11 |
| TasI | AATT | 1 cut(s) | 192 |
| TseI | GCWGC | 1 cut(s) | 71 |
| XceI | RCATGY | 1 cut(s) | 161 |